Topic 21 -- Abstracts with Biological Entities (English) - 75 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Li_H_2019 Development of a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for the detection of porcine pegivirus Li, Hao; Li, Kai; Bi, Zhen; Gu, Jun; Song, Deping; Lei, Dan; Luo, Suoxian; Huang, Dongyan; Wu, Qiong; Ding, Zhen; Wang, Leyi; Ye, Yu; Tang, Yuxin 2019 2019-08-31 PMC N PMC7113777 31022411.0 10.1016/j.jviromet.2019.04.019 98sqovwb 0.918413 Lau_L_2003, Wang_2018, Jiang_2004, Dinh_2011 Nemoto_2015, Chen_2010, Zhang_2014
2 Soliman_2006 Reverse transcription loop-mediated isothermal amplification (RT-LAMP) for rapid detection of viral hemorrhagic septicaemia virus (VHS) Soliman, H.; El-Matbouli, M. 2006 2006-05-31 PMC N PMC7117309 16384659.0 10.1016/j.vetmic.2005.11.063 s78t5qxj 0.901831 Wang_2018, Zhang_2011, Lau_L_2003, Borja_1992, Dinh_2011 Nemoto_2015, Li_H_2019, Zhang_2014, Ranjan_2014
3 Wang_2018 A fast and simple one-step duplex PCR assay for canine distemper virus (CDV) and canine coronavirus (CCoV) detection Wang, Jing; Luo, Yakun; Liang, Lin; Li, Jinxiang; Cui, Shangjin 2018 2018-08-23 PMC N PMC7087121 30141131.0 10.1007/s00705-018-3982-8 q068aybo 0.901414 Lau_L_2003, Jiang_2004, Borja_1992, Zhang_2011 Wang_2017, Nemoto_2015, Cho_K_2001
4 Zhang_2011 Rapid detection of wheat yellow mosaic virus by reverse transcription loop-mediated isothermal amplification Zhang, Zong-Ying; Liu, Xiao-Jun; Li, Da-Wei; Yu, Jia-Lin; Han, Cheng-Gui 2011 2011-12-20 COMM-USE N PMC3260119 22185375.0 10.1186/1743-422x-8-550 828inb8d 0.849423 Wang_2018, Dinh_2011, Lau_L_2003, Borja_1992 Jeong_2015, Nemoto_2015, Li_H_2019, Zhang_2014
5 Goo_N_2016 Rolling circle amplification as isothermal gene amplification in molecular diagnostics Goo, Nam-In; Kim, Dong-Eun 2016 2016-07-29 PMC N PMC7096790 10.1007/s13206-016-0402-6 yir5dia8 0.839198 Wu_L_2010, Thiel_1997, Wang_2018, Majerciak_2018 Wu_L_2010, Fallahi_2015, Kersting_2014, Moser_2012
6 Jeong_2015 Development of a Rapid Detection Method for Potato virus X by Reverse Transcription Loop-Mediated Isothermal Amplification Jeong, Joojin; Cho, Sang-Yun; Lee, Wang-Hyu; Lee, Kui-jae; Ju, Ho-Jong 2015 2015-09-30 PMC N PMC4564147 26361470.0 10.5423/ppj.oa.03.2015.0044 dtvzwin8 0.835481 Lau_L_2003, Wang_2018, Zhang_2011, Borja_1992 Nemoto_2015, Li_H_2019, Yang_2012
7 Shirato_2019 Detecting amplicons of loop‐mediated isothermal amplification Shirato, Kazuya 2019 2019-08-13 PMC N PMC7168367 31342547.0 10.1111/1348-0421.12734 gprd79di 0.835245 Wang_2018, Lau_L_2003, Liu_H_2006, Benson_2008
8 Chen_2010 Detection of swine transmissible gastroenteritis coronavirus using loop-mediated isothermal amplification Chen, Qin; Li, Jian; Fang, Xue-En; Xiong, Wei 2010 2010-08-29 COMM-USE N PMC2939561 20799985.0 10.1186/1743-422x-7-206 8iwljdoi 0.823791 Wang_2018, Dinh_2011, Falcone_1997, Zhang_2011, Lau_L_2003 Stranieri_2017, Nemoto_2015, Pyrc_2011
9 Parida_2008 Loop mediated isothermal amplification (LAMP): a new generation of innovative gene amplification technique; perspectives in clinical diagnosis of infectious diseases Parida, Manmohan; Sannarangaiah, Santhosh; Dash, Paban Kumar; Rao, P. V. L.; Morita, Kouichi 2008 2008-08-20 PMC N PMC7169140 18716992.0 10.1002/rmv.593 1cxrnrv3 0.811739 Liu_H_2006, Wang_2018, Lee_W_2008, Benson_2008, Wu_L_2010
10 Chen_2004 Development of a novel real-time RT-PCR assay with LUX primer for the detection of swine transmissible gastroenteritis virus Chen, Ru; Huang, Weiming; Lin, Zhixiong; Zhou, Zhongfang; Yu, Haiqiong; Zhu, Daozhong 2004 2004-12-01 PMC N PMC7119747 15488621.0 10.1016/j.jviromet.2004.08.003 ndralqvr 0.806212 Dinh_2011, Lau_L_2003, Wang_2018, Vemulapalli_2009, Benson_2008 Nemoto_2015, Cuevas-Romero_2013, Zhang_2014
11 Mekata_2006 Detection of yellow head virus in shrimp by loop-mediated isothermal amplification (LAMP) Mekata, Tohru; Kono, Tomoya; Savan, Ram; Sakai, Masahiro; Kasornchandra, Jiraporn; Yoshida, Terutoyo; Itami, Toshiaki 2006 2006-08-31 PMC N 16597466.0 10.1016/j.jviromet.2006.02.012 gb2vgs97 0.803056 Wang_2018, Lau_L_2003, Li_H_2019, Chen_2008, Zhang_2011
12 En_F_2008 Loop-mediated isothermal amplification establishment for detection of pseudorabies virus En, Fang-Xue; Wei, Xiong; Jian, Li; Qin, Chen 2008 2008-07-31 PMC N PMC7112783 18468699.0 10.1016/j.jviromet.2008.03.028 3yypznr0 0.794878 Wang_2018, Borja_1992, Falcone_1997, Lau_L_2003, Dinh_2011 Nemoto_2015, Fallahi_2015
13 Yang_2012 Development and application of a reverse transcription loop-mediated isothermal amplification method for rapid detection of Duck hepatitis A virus type 1 Yang, Limin; Li, Jing; Bi, Yuhai; Xu, Lei; Liu, Wenjun 2012 2012-08-07 PMC N PMC7088793 22869367.0 10.1007/s11262-012-0798-6 gmjnbnx5 0.790773 Dinh_2011, Chen_2010, Fan_Q_2012, Chen_2008, Li_H_2019 Nemoto_2015, Zhang_2014, Li_H_2019
14 Xie_G_2012 An improved method for detection of Edwardsiella tarda by loop-mediated isothermal amplification by targeting the EsrB gene Xie, Guosi; Zhang, Qingli; Han, Nana; Shi, Chengyin; Wang, Xiuhua; Liu, Qinghui; Huang, Jie 2012 2012-07-02 PMC N PMC7087700 10.1007/s00343-012-1293-6 gmt3bxx3 0.789245 Benson_2008, Wang_2018, Lau_L_2003, Li_H_2019, Zhang_2011 Njiru_2008, Rivera_2013, Zhang_2014
15 Wang_2020 One-pot Detection of COVID-19 with Real-time Reverse-transcription Loop-mediated Isothermal Amplification (RT-LAMP) Assay and Visual RT-LAMP Assay Deguo Wang 2020 2020-04-22 BioRxiv Y 10.1101/2020.04.21.052530 krim73zt 0.789203 Wang_2018, Lau_L_2003, Li_H_2019, Jiang_2004
16 Ahberg_2015 Single Fluorescence Channel-based Multiplex Detection of Avian Influenza Virus by Quantitative PCR with Intercalating Dye Ahberg, Christian D.; Manz, Andreas; Neuzil, Pavel 2015 2015-06-19 COMM-USE N PMC5155576 26088868.0 10.1038/srep11479 8l8vvcw9 0.788008 Wang_2018, Lau_L_2003, Thiel_2002, Benson_2008 Yang_2009, Nemoto_2015, Gut_M_1999
17 Cuevas-Romero_2013 Development of a real-time RT-PCR method for detection of porcine rubulavirus (PoRV-LPMV) Cuevas-Romero, Sandra; Blomström, Anne-Lie; Alvarado, Arcelia; Hernández-Jauregui, Pablo; Rivera-Benitez, Francisco; Ramírez-Mendoza, Humberto; Berg, Mikael 2013 2013-04-30 PMC N PMC7113651 23305816.0 10.1016/j.jviromet.2012.12.009 gqmghn49 0.781682 Lau_L_2003, Benson_2008, Wang_2018, Thiel_2002, Vemulapalli_2009 Nemoto_2015, Decaro_2004, Wang_2018
18 Yang_2011 Detection of hepatitis C virus by an improved loop-mediated isothermal amplification assay Yang, Jin; Fang, Mei-xin; Li, Jie; Lou, Guo-qiang; Lu, Hang-jun; Wu, Nan-ping 2011 2011-05-12 PMC N PMC7087303 21562883.0 10.1007/s00705-011-1001-4 ddcz7zck 0.780215 Wang_2018, Li_H_2019, Lau_L_2003, Dinh_2011, Jeong_2015 Nemoto_2015, Malik_2013, Pyrc_2011
19 Nakamura_2011 Development of multisample detection system using a tag insertion primer and an electrochemical DNA chip Nakamura, Naoko; Ito, Keiko; Hashimoto, Michie; Nakamura, Akiyoshi; Hayashimoto, Nobuhito; Takakura, Akira; Hashimoto, Koji; Nikaido, Masaru; Gemma, Nobuhiro 2011 2011-12-15 PMC N PMC7119438 21925478.0 10.1016/j.ab.2011.08.027 2p079iwb 0.779582 Wang_2018, Thiel_2002, Jiang_2011, Benson_2008, Hofmann_1993 Mori_2006, Yeung_2006, Thaitrong_2010, Wu_M_2018
20 Eboigbodin_2016 Reverse transcription strand invasion based amplification (RT-SIBA): a method for rapid detection of influenza A and B Eboigbodin, Kevin; Filén, Sanna; Ojalehto, Tuomas; Brummer, Mirko; Elf, Sonja; Pousi, Kirsi; Hoser, Mark 2016 2016-04-11 COMM-USE N PMC4875950 27063012.0 10.1007/s00253-016-7491-y svoshzz8 0.773589 Majerciak_2018, Thiel_2002, Wang_2018, Dinh_2011, Thiel_1997 Nemoto_2015, Buesa_1996
21 Mekata_2009 Real-time reverse transcription loop-mediated isothermal amplification for rapid detection of yellow head virus in shrimp Mekata, Tohru; Sudhakaran, Raja; Kono, Tomoya; U-taynapun, Kittichon; Supamattaya, Kidchakan; Suzuki, Yoshihiro; Sakai, Masahiro; Itami, Toshiaki 2009 2009-12-31 PMC N PMC7112779 19646483.0 10.1016/j.jviromet.2009.07.018 09cov26b 0.769814 Wang_2018, Dinh_2011, Li_H_2019, Benson_2008, Lau_L_2003 Nemoto_2015, Li_H_2019, Zhang_2014
22 Bhudevi_2001 Fluorogenic RT–PCR assay (TaqMan) for detection and classification of bovine viral diarrhea virus Bhudevi, Bodreddigari; Weinstock, Daniel 2001 2001-10-22 PMC N PMC7117215 11524161.0 10.1016/s0378-1135(01)00390-x 2n23vee8 0.769761 Lau_L_2003, Wang_2018, Borja_1992, Vemulapalli_2009 Decaro_2004, Nemoto_2015, Decaro_2008
23 Sun_X_2017 Improvement and Evaluation of Loop-Mediated Isothermal Amplification for Rapid Detection of Toxoplasma gondii Infection in Human Blood Samples Sun, Xi-meng; Ji, Yong-sheng; Liu, Xian-yong; Xiang, Mei; He, Guang; Xie, Li; Suo, Jing-xia; Suo, Xun 2017 2017-01-05 COMM-USE N PMC5215908 28056092.0 10.1371/journal.pone.0169125 l7s3raop 0.769222 Wang_2018, Li_H_2019, Benson_2008, Zhang_2011, Thiel_2002 Fallahi_2015, Njiru_2008
24 Wang_2014 Rapid and real-time detection of Porcine Sapelovirus by reverse transcription loop-mediated isothermal amplification assay Wang, Chunyan; Yu, Dayi; Cui, Li; Hua, Xiuguo; Yuan, Congli; Sun, Huan; Liu, Yuxiao 2014 2014-07-31 PMC N PMC7113659 24667302.0 10.1016/j.jviromet.2014.03.011 0ik6ems8 0.769219 Lau_L_2003, Chen_2008, Wang_2018, Jiang_2004, Dinh_2011 Nemoto_2015, Zhang_2011, Li_H_2019, Malik_2013
25 Yang_2020 Rapid Detection of SARS-CoV-2 Using Reverse transcription RT-LAMP method Weihua Yang; Xiaofei Dang; Qingxi Wang; Mingjie Xu; Qianqian Zhao; Yunying Zhou; Huailong Zhao; Li Wang; Yihui Xu; Jun Wang; Shuyi Han; Min Wang; Fengyan Pei; Yunshan Wang 2020 2020-03-02 BioRxiv Y 10.1101/2020.03.02.20030130 va4t15mb 0.767297 Wang_2018, Li_H_2019, Lau_L_2003, Jiang_2004, Chen_2008 Nemoto_2015, Keyaerts_2006
26 Nemoto_2015 Rapid detection of equine coronavirus by reverse transcription loop-mediated isothermal amplification Nemoto, Manabu; Morita, Yoshinori; Niwa, Hidekazu; Bannai, Hiroshi; Tsujimura, Koji; Yamanaka, Takashi; Kondo, Takashi 2015 2015-04-30 PMC N PMC7113660 25682750.0 10.1016/j.jviromet.2015.02.001 fa0mnbzg 0.767297 Lau_L_2003, Jiang_2004, Wang_2018, Li_H_2019, Chen_2010 Stranieri_2017, Li_H_2019, Zhang_2014
27 Lee_S_2008 Compact optical diagnostic device for isothermal nucleic acids amplification Lee, Szu-Yuan; Huang, Jhen-Gang; Chuang, Tsung-Liang; Sheu, Jin-Chuan; Chuang, Yi-Kuang; Holl, Mark; Meldrum, Deirdre R.; Lee, Chun-Nan; Lin, Chii-Wann 2008 2008-08-12 PMC N PMC7125854 10.1016/j.snb.2008.03.008 tcvs4beg 0.763819 Wang_2018, Thiel_2002, Liu_H_2006, Dinh_2011, Nitsche_2004 Mori_2006, Reddy_2011, Yang_2012
28 Mori_2006 Sequence specific visual detection of LAMP reactions by addition of cationic polymers Mori, Yasuyoshi; Hirano, Tsuyoshi; Notomi, Tsugunori 2006 2006-01-10 COMM-USE N PMC1373654 16401354.0 10.1186/1472-6750-6-3 m71xkuo9 0.761415 Liu_H_2006, Jiang_2011, Wang_2018, Wu_L_2010, Yang_2008 Rivera_2013, Fallahi_2015, Lee_S_2008
29 Tao_S_2004 One-Tube Nested RT-PCR Enabled by Using a Plastic Film and its Application for the Rapid Detection of SARS-Virus Tao, Sheng-Ce; Jiang, Di; Lu, Hong-Li; Xing, Wan-Li; Zhou, Yu-Xiang; Cheng, Jing 2004 2004-01-01 PMC N PMC7087936 15049359.0 10.1023/b:bile.0000013708.65032.f1 kjdgm2da 0.760445 Thiel_2002, Wang_2018, Lee_W_2008, Thiel_1997 Nemoto_2015, Li_H_2019
30 Yang_2016 Two Multiplex Real-Time PCR Assays to Detect and Differentiate Acinetobacter baumannii and Non- baumannii Acinetobacter spp. Carrying bla(NDM), bla(OXA-23-Like), bla(OXA-40-Like), bla(OXA-51-Like), and bla(OXA-58-Like) Genes Yang, Qiu; Rui, Yongyu 2016 2016-07-08 COMM-USE N PMC4938629 27391234.0 10.1371/journal.pone.0158958 qyb8er14 0.759490 Lau_L_2003, Jiang_2004, Benson_2008, Wang_2018, van_Kruijssen_2006 Li_P_2015, Villacís_2020, Njiru_2008
31 Haridas_2010 Optimisation of reverse transcriptase loop-mediated isothermal amplification assay for rapid detection of Macrobrachium rosenbergii noda virus and extra small virus in Macrobrachium rosenbergii Haridas, Divya V.; Pillai, Devika; Manojkumar, B.; Nair, C. Mohanakumaran; Sherief, P.M. 2010 2010-07-31 PMC N PMC7112818 20307575.0 10.1016/j.jviromet.2010.03.011 iih233tm 0.759484 Lau_L_2003, Chen_2008, Wang_2018, Thiel_2002 Zhang_2014, Nemoto_2015, Malik_2013, Stranieri_2017
32 Prescott_2016 Rapid Detection of Cyprinid Herpesvirus 3 in Latently Infected Koi (Cyprinus carpio) by Recombinase Polymerase Amplification Prescott, Meagan A.; Reed, Aimee N.; Jin, Ling; Pastey, Manoj K. 2016 2016-07-02 PMC N PMC5958048 27485254.0 10.1080/08997659.2016.1185048 jd0oirju 0.758959 Armesto_2007, Keep_2015, Bickerton_2017, Rice_1992, Keep_2014 Wang_2017, Giner_2020, Sazmand_2019
33 Zhao_2019 A highly sensitive 1-tube nested real-time RT-PCR assay using LNA-modified primers for detection of respiratory syncytial virus Zhao, Li; Wang, Ji; Li, Gui-xia; Qiu, Fang-zhou; Chen, Chen; Zhao, Meng-chuan; Wang, Le; Duan, Su-xia; Feng, Zhi-shan; Ma, Xue-jun 2019 2019-02-28 PMC N PMC7126397 30266400.0 10.1016/j.diagmicrobio.2018.09.001 6jp9yx47 0.755423 Lau_L_2003, Jiang_2004, Dinh_2011, Benson_2008, Wang_2018 Gueudin_2003, Nemoto_2015, Eboigbodin_2017
34 Li_Z_2018 Detection of Novel duck reovirus (NDRV) using visual reverse transcription loop-mediated isothermal amplification (RT-LAMP) Li, Zhili; Cai, Yuejia; Liang, Guozhi; El-Ashram, Saeed; Mei, Minmin; Huang, Wenjing; Li, Xiaowen; Li, Wenfeng; He, Cheng; Huang, Shujian 2018 2018-09-19 COMM-USE N PMC6145877 30232402.0 10.1038/s41598-018-32473-4 eiicdxre 0.750665 Wang_2018, Li_H_2019, Zhang_2011, Benson_2008, Lau_L_2003 Nemoto_2015, Zhang_2014, Li_H_2019
35 Gut_M_1999 One-tube fluorogenic reverse transcription-polymerase chain reaction for the quantitation of feline coronaviruses Gut, Marco; M. Leutenegger, Christian; B. Huder, Jon; C. Pedersen, Niels; Lutz, Hans 1999 1999-01-01 PMC N 10029323.0 10.1016/s0166-0934(98)00129-3 pmz0ywuk 0.748948 Wang_2018, Thiel_2002, Lau_L_2003, Benson_2008 Nemoto_2015, Chen_2015, Leutenegger_1999
36 Woo_C_2020 Sensitive one-step isothermal detection of pathogen-derived RNAs Chang Ha Woo; Sungho Jang; Giyoung Shin; Gyoo Yeol Jung; Jeong Wook Lee 2020 2020-03-09 BioRxiv Y 10.1101/2020.03.05.20031971 1uqjmeic 0.748294 Stork_2011, Rice_1992, Naito_2007, Majerciak_2018, Trobaugh_2017 Nemoto_2015, Stranieri_2017, Malik_2013
37 Yang_2009 Development of a fluorescent quantitative real-time polymerase chain reaction assay for the detection of Goose parvovirus in vivo Yang, Jin-Long; Cheng, An-Chun; Wang, Ming-Shu; Pan, Kang-Cheng; Li, Min; Guo, Yu-Fei; Li, Chuan-Feng; Zhu, De-Kang; Chen, Xiao-Yue 2009 2009-09-15 COMM-USE N PMC2751755 19754946.0 10.1186/1743-422x-6-142 3yn80r9h 0.745825 Wang_2018, Lau_L_2003, Li_H_2019, Dinh_2011, Benson_2008 Zhang_2014, Zhuang_2019, Nemoto_2015
38 Lee_D_2009 Detection of genetically modified organisms (GMOs) using isothermal amplification of target DNA sequences Lee, David; La Mura, Maurizio; Allnutt, Theo R; Powell, Wayne 2009 2009-02-02 COMM-USE N PMC2656497 19187544.0 10.1186/1472-6750-9-7 rl7sdzd7 0.742404 Wang_2018, Lee_W_2008, Thiel_2002, Li_H_2019 Fallahi_2015, Mori_2006, Sun_X_2017
39 Chen_2010 Comparison of reverse transcription loop-mediated isothermal amplification, conventional PCR and real-time PCR assays for Japanese encephalitis virus Chen, Zhiyong; Liao, Yuxue; Ke, Xuemei; Zhou, Jie; Chen, Yixiong; Gao, LuLu; Chen, Qing; Yu, Shouyi 2010 2010-11-30 PMC N PMC7089266 21116858.0 10.1007/s11033-010-0525-0 rujylmib 0.742404 Dinh_2011, Fan_Q_2012, Ren_X_2011, Chen_2008 Li_H_2019, Nemoto_2015, Zhang_2011
40 Zhang_2005 Sensitive Detection of SARS Coronavirus RNA by a Novel Asymmetric Multiplex Nested RT-PCR Amplification Coupled With Oligonucleotide Microarray Hybridization Zhang, Zhi-wei; Zhou, Yi-ming; Zhang, Yan; Guo, Yong; Tao, Sheng-ce; Li, Ze; Zhang, Qiong; Cheng, Jing 2005 2005-01-01 PMC N PMC7122606 16156097.0 10.1385/1-59259-923-0:59 e4x8gkd8 0.741219 Lau_L_2003, Wang_2018, Jiang_2004, Liu_H_2006, Benson_2008 Nemoto_2015
41 Wang_2018 Evaluation of an incubation instrument-free reverse transcription recombinase polymerase amplification assay for rapid and point-of-need detection of canine distemper virus Wang, Jianchang; Wang, Jinfeng; Li, Ruiwen; Shi, Ruihan; Liu, Libing; Yuan, Wanzhe 2018 2018-10-31 PMC N PMC7113680 30009850.0 10.1016/j.jviromet.2018.07.007 itvhobbu 0.741197 Dinh_2011, Chen_2010, Lau_L_2003, Vemulapalli_2009, Wang_2018 Wang_2017, Zhang_2014, Nemoto_2015
42 Wang_2018 Rapid detection of transmissible gastroenteritis virus in swine small intestine samples using real-time reverse transcription recombinase polymerase amplification Wang, Jinfeng; Wang, Jianchang; Zhang, Ruoxi; Liu, Libing; Shi, Ruihan; Han, Qingan; Yuan, Wanzhe 2018 2018-06-30 PMC N PMC7113865 29550352.0 10.1016/j.jviromet.2018.03.005 fvdq0yes 0.733945 Lau_L_2003, Vemulapalli_2009, Jiang_2004, Dinh_2011, Wang_2018 Nemoto_2015, Gueudin_2003, Cho_K_2001
43 Surabattula_2013 Simple, rapid, inexpensive platform for the diagnosis of malaria by loop mediated isothermal amplification (LAMP) Surabattula, Rambabu; Vejandla, Manju Pradeep; Mallepaddi, Prudhvi Chand; Faulstich, Konrad; Polavarapu, Rathnagiri 2013 2013-07-31 PMC N PMC7094605 23562879.0 10.1016/j.exppara.2013.03.031 d43djlyt 0.731890 Pandya_2007, Dinh_2011, Benson_2008, Tan_J_2011, Wang_2018 Mohon_2014, Fallahi_2015, Lucchi_2010
44 Zanoli_2012 Isothermal Amplification Methods for the Detection of Nucleic Acids in Microfluidic Devices Zanoli, Laura Maria; Spoto, Giuseppe 2012 2012-12-27 COMM-USE N PMC4263587 25587397.0 10.3390/bios3010018 thx9zh11 0.730388 Liu_H_2006, May_E_2016, Monis_2006, Wang_2018 Zhang_2019, Mori_2006, Wang_2011, Mauk_2015
45 Peng_2015 Rapid detection of the common avian leukosis virus subgroups by real-time loop-mediated isothermal amplification Peng, Hao; Qin, Lili; Bi, Yuyu; Wang, Peikun; Zou, Guangzhen; Li, Jun; Yang, Yongli; Zhong, Xingfu; Wei, Ping 2015 2015-11-24 COMM-USE N PMC4657318 26596553.0 10.1186/s12985-015-0430-1 yiqmjn2z 0.730019 Dinh_2011, Chen_2010, Wang_2018, Li_H_2019, Chen_2008 Shirato_2007, Stranieri_2017, Malik_2013
46 Vemulapalli_2009 A real-time TaqMan® RT-PCR assay with an internal amplification control for rapid detection of transmissible gastroenteritis virus in swine fecal samples Vemulapalli, Ramesh; Gulani, Jatinder; Santrich, Cecilia 2009 2009-12-31 PMC N PMC7112873 19729039.0 10.1016/j.jviromet.2009.08.016 azqbbsfr 0.728478 Lau_L_2003, Falcone_1997, Borja_1992, Dinh_2011 Decaro_2004, Wang_2018, Nemoto_2015
47 Cardoso_2010 Visual detection of turkey coronavirus RNA in tissues and feces by reverse-transcription loop-mediated isothermal amplification (RT-LAMP) with hydroxynaphthol blue dye Cardoso, Tereza C.; Ferrari, Heitor F.; Bregano, Lívia C.; Silva-Frade, Camila; Rosa, Ana Carolina G.; Andrade, Alexandre L. 2010 2010-12-31 PMC N PMC7125592 20732411.0 10.1016/j.mcp.2010.08.003 yjbcvf3o 0.728009 Fan_Q_2012, Chen_2010, Lau_L_2003, Vemulapalli_2009, Dinh_2011 Nemoto_2015, Li_H_2019, Zhang_2014
48 Mohon_2014 A new visually improved and sensitive loop mediated isothermal amplification (LAMP) for diagnosis of symptomatic falciparum malaria Mohon, Abu Naser; Elahi, Rubayet; Khan, Wasif A.; Haque, Rashidul; Sullivan, David J.; Alam, Mohammad Shafiul 2014 2014-06-30 PMC N PMC7117200 24613155.0 10.1016/j.actatropica.2014.02.016 49rpfins 0.719427 Wang_2018, Li_H_2019, Lau_L_2003, Jiang_2004, Benson_2008 Lucchi_2010, Fallahi_2015, Surabattula_2013
49 Wang_2016 Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus Wang, Feng-Xue; Yuan, Dan-Yi; Jin, Ya-Nan; Hu, Lin; Sun, Zhi-Yong; He, Qian; Zhao, Shi-Hua; Zhan, Shu-Bai; Wen, Yong-Jun 2016 2016-04-19 COMM-USE N PMC4835727 27090105.0 10.1038/srep24702 iq9xqe31 0.718567 Dinh_2011, Armesto_2007, Bickerton_2017, Keep_2015, Keep_2014 Malik_2013, Wang_2018, Nemoto_2015
50 Mo_J_2020 Validation of specific quantitative real-time RT-PCR assay panel for Infectious Bronchitis using synthetic DNA standards and clinical specimens Mo, Jongseo; Angelichio, Michael; Gow, Lisa; Leathers, Valerie; Jackwood, Mark W. 2020 2020-02-29 PMC N PMC7113781 31712094.0 10.1016/j.jviromet.2019.113773 q9nkqg87 0.717104 Dinh_2011, Benson_2008, Lau_L_2003, Vemulapalli_2009, Wang_2018 Nemoto_2015, Gueudin_2003, Yuk_S_2016
51 Marzinotto_2020 A streamlined approach to rapidly detect SARS-CoV-2 infection, avoiding RNA extraction Stefania Marzinotto; Catia Mio; Adriana Cifu'; Roberto Verardo; Corrado Pipan; Claudio Schneider; Francesco Curcio 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.06.20054114 mi6w8ppe 0.713314 Chen_2018, Majerciak_2018, Oba_M_2018, Xu_L_2019, Chang_2011 Chandler-Brown_2020, Kalikiri_2020, OKBA_2020
52 Emery_2004 Real-Time Reverse Transcription–Polymerase Chain Reaction Assay for SARS-associated Coronavirus Emery, Shannon L.; Erdman, Dean D.; Bowen, Michael D.; Newton, Bruce R.; Winchell, Jonas M.; Meyer, Richard F.; Tong, Suxiang; Cook, Byron T.; Holloway, Brian P.; McCaustland, Karen A.; Rota, Paul A.; Bankamp, Bettina; Lowe, Luis E.; Ksiazek, Tom G.; Bellini, William J.; Anderson, Larry J. 2004 2004-02-23 PMC N PMC3322901 15030703.0 10.3201/eid1002.030759 51byypaq 0.713314 Lau_L_2003, Nitsche_2004, Dinh_2011, Jiang_2004 Nemoto_2015, Lau_L_2003, Keyaerts_2006
53 Chen_2008 Rapid detection of porcine circovirus type 2 by loop-mediated isothermal amplification Chen, Hao-tai; Zhang, Jie; Sun, De-hui; Chu, Yue-feng; Cai, Xue-peng; Liu, Xiang-tao; Luo, Xue-nong; Liu, Qing; Liu, Yong-sheng 2008 2008-05-31 PMC N PMC7112855 18355932.0 10.1016/j.jviromet.2008.01.023 1o1jo8uk 0.710256 Dinh_2011, Chen_2010, Chen_2008, Ren_X_2011, Fan_Q_2012 Zhao_2011, Malik_2013, Nemoto_2015
54 Fan_Q_2012 A reverse transcription loop-mediated isothermal amplification method for rapid detection of bovine viral diarrhea virus Fan, Qing; Xie, Zhixun; Xie, Liji; Liu, Jiabo; Pang, Yaoshan; Deng, Xianwen; Xie, Zhiqin; Peng, Yi; Wang, Xiuqing 2012 2012-12-31 PMC N PMC7112856 22947692.0 10.1016/j.jviromet.2012.08.007 zstr65vk 0.710136 Dinh_2011, Chen_2010, Chen_2008, Ren_X_2011 Nemoto_2015, Malik_2013, Li_H_2019, Zhang_2011
55 Cho_H_2005 Detection of Canine Distemper Virus in Blood Samples by Reverse Transcription Loop‐Mediated Isothermal Amplification Cho, H. S.; Park, N. Y. 2005 2005-11-10 PMC N PMC7165947 16283921.0 10.1111/j.1439-0450.2005.00886.x 9bamcjo1 0.709434 Zhang_2011, Dinh_2011, Li_H_2019, Wang_2018, Vemulapalli_2009
56 Dhar_2002 Quantitative assay for measuring the Taura syndrome virus and yellow head virus load in shrimp by real-time RT-PCR using SYBR Green chemistry Dhar, Arun K.; Roux, Michelle M.; Klimpel, Kurt R. 2002 2002-06-30 PMC N 12020794.0 10.1016/s0166-0934(02)00042-3 7n4cvgs4 0.704081 Borja_1992, Majerciak_2018, Falcone_1997, Thiel_2002, Armesto_2007
57 Li_Z_2016 Picoliter Well Array Chip-Based Digital Recombinase Polymerase Amplification for Absolute Quantification of Nucleic Acids Li, Zhao; Liu, Yong; Wei, Qingquan; Liu, Yuanjie; Liu, Wenwen; Zhang, Xuelian; Yu, Yude 2016 2016-04-13 COMM-USE N PMC4830604 27074005.0 10.1371/journal.pone.0153359 0tmd9knh 0.701558 Liu_H_2006, Wang_2018, Zanoli_2012, Benson_2008, Ahberg_2015 Zanoli_2012, Mori_2006, Mauk_2015, Kersting_2014
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59 Guo_Y_2009 Development of TaqMan(® )MGB fluorescent real-time PCR assay for the detection of anatid herpesvirus 1 Guo, Yufei; Cheng, Anchun; Wang, Mingshu; Shen, Chanjuan; Jia, Renyong; Chen, Shun; Zhang, Na 2009 2009-06-04 COMM-USE N PMC2696427 19497115.0 10.1186/1743-422x-6-71 qfb7074e 0.695481 Wang_2018, Lau_L_2003, Dinh_2011, Jiang_2004, Li_H_2019 Yang_2009, Nemoto_2015, Zhang_2014
60 Wang_2016 Rapid and sensitive detection of canine parvovirus type 2 by recombinase polymerase amplification Wang, Jianchang; Liu, Libing; Li, Ruiwen; Wang, Jinfeng; Fu, Qi; Yuan, Wanzhe 2016 2016-01-05 PMC N PMC7087227 26729477.0 10.1007/s00705-015-2738-y nn7qvf8i 0.695426 Dinh_2011, Armesto_2007, Majerciak_2018, Keep_2015, Keep_2014 Wang_2017, Geng_2017, Wang_2019
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62 Wang_2008 Loop-mediated isothermal amplification method for rapid detection of the toxic dinoflagellate Alexandrium, which causes algal blooms and poisoning of shellfish Wang, Li; Li, Lin; Alam, M. J.; Geng, Yuhuan; Li, Zhiyong; Yamasaki, Shinji; Shi, Lei 2008 2008-05-01 PMC N PMC7110188 18355290.0 10.1111/j.1574-6968.2008.01074.x dc138z56 0.694557 Benson_2008, Wang_2018, Chang_2011, Gardner_2004 Rivera_2013, Njiru_2008, Najafzadeh_2018, Stranieri_2017
63 Zhao_2018 A lateral flow dipstick combined with reverse transcription recombinase polymerase amplification for rapid and visual detection of the bovine respirovirus 3 Zhao, Guimin; Wang, Hongmei; Hou, Peili; Xia, Xianzhu; He, Hongbin 2018 2018-10-31 PMC N PMC7126874 30138696.0 10.1016/j.mcp.2018.08.004 odhpuj3b 0.690262 Dinh_2011, Benson_2008, Chen_2010, Wang_2018, Li_H_2019 Nemoto_2015, Mu_Y_2014, Wang_2017, Malik_2013
64 Huang_2018 A Rapid and Specific Assay for the Detection of MERS-CoV Huang, Pei; Wang, Hualei; Cao, Zengguo; Jin, Hongli; Chi, Hang; Zhao, Jincun; Yu, Beibei; Yan, Feihu; Hu, Xingxing; Wu, Fangfang; Jiao, Cuicui; Hou, Pengfei; Xu, Shengnan; Zhao, Yongkun; Feng, Na; Wang, Jianzhong; Sun, Weiyang; Wang, Tiecheng; Gao, Yuwei; Yang, Songtao; Xia, Xianzhu 2018 2018-05-29 COMM-USE N PMC5987675 29896174.0 10.3389/fmicb.2018.01101 22gflsaj 0.689666 Dinh_2011, Myint_1989, Armesto_2007, Chen_2010, Majerciak_2018 Mu_Y_2014, Hoteit_2016, Nemoto_2015
65 Liu_L_2018 Equipment-free recombinase polymerase amplification assay using body heat for visual and rapid point-of-need detection of canine parvovirus 2 Liu, Libing; Wang, Jianchang; Geng, Yunyun; Wang, Jinfeng; Li, Ruiwen; Shi, Ruihan; Yuan, Wanzhe 2018 2018-06-30 PMC N PMC7127419 29705183.0 10.1016/j.mcp.2018.04.004 i3zyqu54 0.689101 Vemulapalli_2009, Falcone_1997, Dinh_2011, Benson_2008, Wang_2018 Zhuang_2019, Wang_2017, Zhang_2014
66 Wang_2019 Visual detection of porcine epidemic diarrhea virus using a novel reverse transcription polymerase spiral reaction method Wang, Xueyu; Xu, Xin; Hu, Wen; Zuo, Kejing; Li, Zhili; Kan, Yunchao; Yao, Lunguang; Ji, Jun; Bi, Yingzuo 2019 2019-04-15 COMM-USE N PMC6466714 30987635.0 10.1186/s12917-019-1851-7 zminzrov 0.687552 Dinh_2011, Chen_2010, Vemulapalli_2009, Armesto_2007, Chen_2008 Malik_2013, Nemoto_2015, Hanaki_2013
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68 Chandrasekar_2015 Rapid Detection of Avian Infectious Bronchitis Virus by Reverse Transcriptase-Loop Mediated Isothermal Amplification Chandrasekar, A.; Raja, A.; Dhinakar Raj, G.; Thangavelu, A.; Kumanan, K. 2015 2015-03-04 PMC N PMC7100760 10.1007/s40011-015-0490-4 oqm9pw6d 0.684358 Dinh_2011, Lau_L_2003, Wang_2018, Li_H_2019 Nemoto_2015, Shirato_2007, Chen_2010
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70 Park_2020 Development of Reverse Transcription Loop-mediated Isothermal Amplification (RT-LAMP) Assays Targeting SARS-CoV-2 Gun-Soo Park; Keunbon Ku; Seung-Hwa Beak; Seong Jun Kim; Seung Il Kim; Bum-Tae Kim; Jin-Soo Maeng 2020 2020-03-12 BioRxiv Y 10.1101/2020.03.09.983064 1qn5y4gc 0.682171 Dinh_2011, Benson_2008, Lau_L_2003, Chen_2010, Li_H_2019 Park_2020, Nemoto_2015, Stranieri_2017, Li_H_2019
71 Ranjan_2014 Development and evaluation of a one step reverse transcription-loop mediated isothermal amplification assay (RT-LAMP) for rapid detection of foot and mouth disease virus in India Ranjan, Rajeev; Kangayan, Muniswamy; Subramaniam, Saravanan; Mohapatra, Jajati K.; Biswal, Jitendra K.; Sharma, Gaurav K.; Sanyal, Aniket; Pattnaik, Bramhadev 2014 2014-04-13 PMC N PMC4188206 25674604.0 10.1007/s13337-014-0211-2 hmuljlt5 0.681409 Wang_2018, Dinh_2011, Vemulapalli_2009, Lau_L_2003, Falcone_1997 Zhang_2014, Nemoto_2015, Li_H_2019
72 Shi_X_2016 A multiplex real-time PCR panel assay for simultaneous detection and differentiation of 12 common swine viruses Shi, Xiju; Liu, Xuming; Wang, Qin; Das, Amaresh; Ma, Guiping; Xu, Lu; Sun, Qing; Peddireddi, Lalitha; Jia, Wei; Liu, Yanhua; Anderson, Gary; Bai, Jianfa; Shi, Jishu 2016 2016-10-31 PMC N PMC7119729 27506582.0 10.1016/j.jviromet.2016.08.005 2z664ffl 0.681346 Dinh_2011, Lau_L_2003, Wang_2018, Benson_2008, Jiang_2004 Huang_2009, Xiao_2014, Cho_K_2001
73 Wilkes_2015 An insulated isothermal PCR method on a field-deployable device for rapid and sensitive detection of canine parvovirus type 2 at points of need Wilkes, Rebecca P.; Lee, Pei-Yu A.; Tsai, Yun-Long; Tsai, Chuan-Fu; Chang, Hsiu-Hui; Chang, Hsiao-Fen G.; Wang, Hwa-Tang T. 2015 2015-08-31 PMC N PMC7119629 25889355.0 10.1016/j.jviromet.2015.04.007 09dm8vu2 0.680398 Dinh_2011, Wang_2018, Vemulapalli_2009, Fan_Q_2012, Lau_L_2003 Zhuang_2019, Zaher_2020, Wang_2017
74 Park_2009 Development of SYBR Green real-time RT-PCR for rapid detection, quantitation and diagnosis of unclassified bovine enteric calicivirus Park, Sang-Ik; Park, Da-Hae; Saif, Linda J.; Jeong, Young-Ju; Shin, Dong-Jun; Chun, Young-Hyun; Park, Su-Jin; Kim, Hyun-Jeong; Hosmillo, Myra; Kwon, Hyung-Jun; Kang, Mun-Il; Cho, Kyoung-Oh 2009 2009-07-31 PMC N PMC7119535 19442847.0 10.1016/j.jviromet.2009.03.001 tjy7f9rk 0.678558 Lau_L_2003, Jiang_2004, Wang_2018, Hanaki_2014 Nemoto_2015, Decaro_2004, Kumar_2010
75 Douglas_2015 Real-time reverse transcriptase polymerase chain reaction assays for Middle East Respiratory Syndrome Douglas, Christina E.; Kulesh, David A.; Jaissle, James G.; Minogue, Timothy D. 2015 2015-12-31 PMC N PMC7126732 26365228.0 10.1016/j.mcp.2015.09.001 uix2y084 0.677553 Lau_L_2003, Jiang_2004, Wang_2018, Nitsche_2004 Nemoto_2015, Gueudin_2003, Emery_2004
76 Nitsche_2004 SARS Coronavirus Detection Nitsche, Andreas; Schweiger, Brunhilde; Ellerbrok, Heinz; Niedrig, Matthias; Pauli, Georg 2004 2004-07-23 PMC N PMC3323308 15324554.0 10.3201/eid1007.030678 cxq9v218 0.676735 Thiel_2002, Lau_L_2003, Wang_2018, Jiang_2004 Emery_2004, Keyaerts_2006, Zhai_2004
77 Chen_2008 Reverse transcription loop-mediated isothermal amplification for the detection of highly pathogenic porcine reproductive and respiratory syndrome virus Chen, Hao-tai; Zhang, Jie; Sun, De-hui; Ma, Li-na; Liu, Xiang-tao; Quan, Kai; Liu, Yong-sheng 2008 2008-11-30 PMC N PMC7112790 18706931.0 10.1016/j.jviromet.2008.07.006 kylki373 0.676614 Dinh_2011, Lau_L_2003, Jiang_2004, Chen_2010 Nemoto_2015, Ren_X_2011, Shirato_2007, Hanaki_2013
78 Chen_2016 Development of a bead-based suspension array for the detection of pathogens in acute respiratory tract infections Chen, Yu-Sheng; Li, Hong-Ru; Zhang, Wei; Hua, Zhi-Dan; Lin, Xiao-Hong; Lin, Meng-Qing; Huang, Wen-Sen; Huang, Li-Ping; Yu, Xiao-Li; Xu, Neng-Luan; Lin, Ming; Xie, Bao-Song; Shen, Xiao-Na; Xie, Jian-Feng; Wang, Yi; Huang, Meng; Wu, Yan-An; Hu, Xin-Lan 2016 2016-07-24 PMC N PMC4994910 27190247.0 10.1177/1535370216647128 5qx6w7dl 0.676614 Benson_2008, Liu_H_2006, Lau_L_2003, Vemulapalli_2009 Riahi_2011, Wang_2018, Wu_M_2018, Goodman_2016
79 Chiu_2006 Automated extraction protocol for quantification of SARS-Coronavirus RNA in serum: an evaluation study Chiu, Rossa WK; Jin, Yongjie; Chung, Grace TY; Lui, Wing-bong; Chan, Anthony TC; Lim, Wilina; Dennis Lo, YM 2006 2006-02-09 COMM-USE N PMC1382231 16466582.0 10.1186/1471-2334-6-20 gwd8qin6 0.675272 Wang_2018, Lau_L_2003, Bruce_2020, Esona_2013 Poon_2003, Saijo_2005
80 Radhika_2016 Detection of Clostridium perfringens alpha toxin gene in lambs by loop mediated isothermal amplification Radhika, B.; Kumar, N. Vinod; Sreenivasulu, D. 2016 2016-01-20 COMM-USE N PMC4819352 27051186.0 10.14202/vetworld.2016.60-64 hpcqxlr5 0.674415 Lau_L_2003, Wang_2018, Chen_2016, Thiel_2002, Vemulapalli_2009 Rivera_2013, Fallahi_2015, Nemoto_2015
81 Wang_2017 Rapid and sensitive detection of canine distemper virus by real-time reverse transcription recombinase polymerase amplification Wang, Jianchang; Wang, Jinfeng; Li, Ruiwen; Liu, Libing; Yuan, Wanzhe 2017 2017-08-15 COMM-USE N PMC5558738 28810858.0 10.1186/s12917-017-1180-7 hj0bt9bd 0.672606 Dinh_2011, Chen_2010, Tallmadge_2008, Falcone_1997, Escutenaire_2006 Nemoto_2015, Stranieri_2017
82 Njiru_2008 African trypanosomiasis: Sensitive and rapid detection of the sub-genus Trypanozoon by loop-mediated isothermal amplification (LAMP) of parasite DNA Njiru, Z.K.; Mikosza, A.S.J.; Matovu, E.; Enyaru, J.C.K.; Ouma, J.O.; Kibona, S.N.; Thompson, R.C.A.; Ndung’u, J.M. 2008 2008-04-30 PMC N PMC7094514 17991469.0 10.1016/j.ijpara.2007.09.006 ru4ky6kz 0.671686 Wang_2018, Benson_2008, Lau_L_2003, Vemulapalli_2009, Fallahi_2015 Sazmand_2019, Stranieri_2017
83 Hou_P_2017 Rapid detection of infectious bovine Rhinotracheitis virus using recombinase polymerase amplification assays Hou, Peili; Wang, Hongmei; Zhao, Guimin; He, Chengqiang; He, Hongbin 2017 2017-12-13 COMM-USE N PMC5729238 29237466.0 10.1186/s12917-017-1284-0 bgrgzfoo 0.665343 Dinh_2011, Falcone_1997, Armesto_2007, Vemulapalli_2009, Fan_Q_2012 Wang_2017, Nemoto_2015
84 Chen_2016 Preliminary Study on Detecting the SARS-CoV Specific Target cDNA Fragments by Multiplex PCR Chen, Wenbing; Li, Shousong; Shao, Biying; Zheng, Teng; Jiang, Shuxun; Huang, Xiaorong; Cai, Kaizhen; Zhang, Zhideng 2016 2016-11-28 None N PMC5172431 15629044.0 10.1016/s1672-0229(04)02008-x r2upa4o0 0.663788 Falcone_1997, Thiel_2002, Lau_L_2003, Nitsche_2004 Lau_L_2003, Wang_2009
85 Ablordey_2012 Detection of Mycobacterium ulcerans by the Loop Mediated Isothermal Amplification Method Ablordey, Anthony; Amissah, Diana Ackon; Aboagye, Isaac Frimpong; Hatano, Ben; Yamazaki, Toshio; Sata, Tetsutaro; Ishikawa, Koichi; Katano, Harutaka 2012 2012-04-03 COMM-USE N PMC3317900 22509415.0 10.1371/journal.pntd.0001590 cpjlzutk 0.663706 Benson_2008, Lau_L_2003, Dinh_2011, Wang_2018, Dalpke_2016 Muthuvelu_2019, Giner_2020, Englund_2012
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87 Juang_2004 Coupling multiplex RT-PCR to a gene chip assay for sensitive and semiquantitative detection of severe acute respiratory syndrome-coronavirus Juang, Jyh-Lyh; Chen, Tsan-Chi; Jiang, Shih Sheng; Hsiung, Chao A; Chen, Wei-Chen; Chen, Guang-Wu; Lin, Shiang-Ming; Lin, Jih-Hui; Chiu, Shu-Chun; Lai, Yiu-Kay 2004 2004-06-14 PMC N PMC7100734 15195120.0 10.1038/labinvest.3700136 r8vfssev 0.663088 Jiang_2004, Dinh_2011, Lau_L_2003, Emery_2004 Nemoto_2015
88 Shirato_2018 Development of fluorescent reverse transcription loop-mediated isothermal amplification (RT-LAMP) using quenching probes for the detection of the Middle East respiratory syndrome coronavirus Shirato, Kazuya; Semba, Shohei; El-Kafrawy, Sherif A.; Hassan, Ahmed M.; Tolah, Ahmed M.; Takayama, Ikuyo; Kageyama, Tsutomu; Notomi, Tsugunori; Kamitani, Wataru; Matsuyama, Shutoku; Azhar, Esam Ibraheem 2018 2018-08-31 PMC N PMC7113683 29763640.0 10.1016/j.jviromet.2018.05.006 m2vy11g6 0.662705 Dinh_2011, Wang_2018, Jiang_2004, Lau_L_2003, Nitsche_2004 Nemoto_2015, Li_H_2019
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90 Esona_2013 Comparative evaluation of commercially available manual and automated nucleic acid extraction methods for rotavirus RNA detection in stools Esona, Mathew D.; McDonald, Sharla; Kamili, Shifaq; Kerin, Tara; Gautam, Rashi; Bowen, Michael D. 2013 2013-12-31 None N PMC4603280 24036075.0 10.1016/j.jviromet.2013.08.023 aw7irlg2 0.660807 Lau_L_2003, Wang_2018, Borja_1992, Chiu_2006 Buesa_1996, Malik_2013, Greene_2003
91 Wang_2019 Development of a recombinase polymerase amplification assay with lateral flow dipstick for rapid detection of feline parvovirus Wang, Zhao-Hua; Wang, Xiao-Jia; Hou, Shao-Hua 2019 2019-09-30 PMC N PMC7113848 31216435.0 10.1016/j.jviromet.2019.113679 bkq598ur 0.659444 Dinh_2011, Majerciak_2018, Armesto_2007, Benson_2008, Mizutani_2007 Stranieri_2017, Liu_M_2018, Wang_2017, Zhuang_2019
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94 Zhang_2014 Development and evaluation of reverse transcription loop-mediated isothermal amplification assay for the detection of the fathead minnow nidovirus Zhang, Qingli; Standish, Isaac; Winters, Andrew D.; Puzach, Corey; Ulferts, Rachel; Ziebuhr, John; Faisal, Mohamed 2014 2014-06-15 PMC N PMC7113640 24594288.0 10.1016/j.jviromet.2014.02.018 6yrpi1ot 0.657629 Li_H_2019, Dinh_2011, Lau_L_2003, Wang_2018, Chen_2010 Nemoto_2015, Stranieri_2017, Li_H_2019
95 Chan_2016 A Rapid and Low-Cost PCR Thermal Cycler for Infectious Disease Diagnostics Chan, Kamfai; Wong, Pui-Yan; Yu, Peter; Hardick, Justin; Wong, Kah-Yat; Wilson, Scott A.; Wu, Tiffany; Hui, Zoe; Gaydos, Charlotte; Wong, Season S. 2016 2016-02-12 COMM-USE N PMC4752298 26872358.0 10.1371/journal.pone.0149150 pt4jsr6d 0.656675 Wu_W_2009, Dinh_2011, Jeong_2015, Wang_2018, Djikeng_2009 Nemoto_2015, Li_J_2012, Zambenedetti_2017
96 Malik_2013 Rapid detection of human rotavirus using NSP4 gene specific reverse transcription loop-mediated isothermal amplification assay Malik, Yashpal Singh; Sharma, Kuldeep; Kumar, Naveen; Shivachandra, Sathish B.; Rawat, Vinita; Rakholia, Ritu; Ranjan, Rajeev; Ganesh, Balasubramanian; Parida, ManMohan 2013 2013-07-26 PMC N PMC3784908 24426285.0 10.1007/s13337-013-0147-y 7k8j3y1s 0.656034 Wang_2018, Dinh_2011, Lau_L_2003, Benson_2008, Li_H_2019 Nemoto_2015, Shirato_2007
97 Wu_X_2019 Simultaneous and visual detection of infectious bronchitis virus and Newcastle disease virus by multiple LAMP and lateral flow dipstick Wu, Xuan; Song, Zengxu; Zhai, Xiwen; Zuo, Lei; Mei, Xueran; Xiang, Rong; Kang, Zhuangzhuang; Zhou, Long; Wang, Hongning 2019 2019-11-01 PMC N PMC7107193 31265112.0 10.3382/ps/pez372 jtvez46y 0.653786 Dinh_2011, Tallmadge_2008, Chen_2010, Chen_2010, Kang_2010 Mu_Y_2014, Nemoto_2015, Shirato_2007
98 Ma_L_2018 Development of a Conventional RT-PCR Assay for Rapid Detection of Porcine Deltacoronavirus with the Same Detection Limit as a SYBR Green-Based Real-Time RT-PCR Assay Ma, Lei; Zeng, Fanwen; Huang, Bihong; Cong, Feng; Huang, Ren; Ma, Jingyun; Guo, Pengju 2018 2018-11-06 COMM-USE N PMC6247729 30533434.0 10.1155/2018/5035139 68cr4amg 0.653753 Lau_L_2003, Jiang_2004, Wang_2018, Benson_2008, Li_H_2019 Nemoto_2015, Gueudin_2003, Cuevas-Romero_2013
99 Jiang_2012 Development of A Loop-Mediated Isothermal Amplification (LAMP) for the Detection of F5 Fimbriae Gene in Enterotoxigenic Escherichia coli (ETEC) Jiang, Kuiyu; Zhu, Ying; Liu, Wenxin; Feng, Yufei; He, Lili; Guan, Weikun; Hu, Wenxia; Shi, Dongfang 2012 2012-08-14 PMC N PMC7080040 22890294.0 10.1007/s00284-012-0204-6 1nu399lz 0.653753 Wang_2018, Zhang_2011, Li_H_2019, Benson_2008, Vemulapalli_2009 Rivera_2013, Zhang_2014, Radhika_2016
100 He_J_2009 Simultaneous Detection of CDC Category “A” DNA and RNA Bioterrorism Agents by Use of Multiplex PCR & RT-PCR Enzyme Hybridization Assays He, Jie; Kraft, Andrea J.; Fan, Jiang; Van Dyke, Meredith; Wang, Lihua; Bose, Michael E.; Khanna, Marilyn; Metallo, Jacob A.; Henrickson, Kelly J. 2009 2009-10-20 COMM-USE N PMC2836126 20224751.0 10.3390/v1030441 fhp3pbts 0.653211 Borja_1992, Ayers_2006, Hull_2008, Dinh_2011, Chen_2010 Reddy_2011, Yi_L_2012, Cho_K_2001
101 Yoda_2007 Evaluation and application of reverse transcription loop‐mediated isothermal amplification for detection of noroviruses Yoda, Tomoko; Suzuki, Yasuhiko; Yamazaki, Kenji; Sakon, Naomi; Kanki, Masashi; Aoyama, Ikuko; Tsukamoto, Teizo 2007 2007-01-23 PMC N PMC7166943 17245722.0 10.1002/jmv.20802 lshsgex3 0.652327 Dinh_2011, Benson_2008, Vemulapalli_2009, Falcone_1997, Nitsche_2004
102 Lee_G_2013 A comparison of oligonucleotide-based microarray and real-time PCR for the detection of sexually transmitted infections Lee, Gyeong-In; Yoen, Jong Pil; Kang, Jin Seok; Hwang, Seung Yong; Hong, Yu-Min; Yang, Jeong-Ha; Yoon, Hyun Kyu 2013 2013-03-20 PMC N PMC7096812 10.1007/s13206-013-7111-1 78du7c1s 0.651418 Wu_W_2009, Wu_J_2009, van_Kruijssen_2006, Dinh_2011 Li_J_2012, Giles_2015, Fallahi_2015
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104 Hanaki_2014 Detection of murine norovirus by reverse transcription loop-mediated isothermal amplification Hanaki, Ken-Ichi; Ike, Fumio; Kajita, Ayako; Yasuno, Wataru; Yanagiba, Misato; Goto, Motoki; Sakai, Kouji; Ami, Yasushi; Kyuwa, Shigeru 2014 2014-08-31 PMC N 24717164.0 10.1016/j.jviromet.2014.03.025 1hh8lj8t 0.649257 Lau_L_2003, Jiang_2004, Chen_2008, Wang_2018
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122 Brown_2020 Comparison of SARS-CoV2 N gene real-time RT-PCR targets and commercially available mastermixes Julianne R Brown; Denise O’Sullivan; Rui PA Pereira; Alexandra S Whale; Eloise Busby; Jim Huggett; Kathryn Harris 2020 2020-04-19 BioRxiv Y 10.1101/2020.04.17.047118 z6qqy858 0.634442 Lau_L_2003, Wang_2018, Jiang_2004, Thiel_2002
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124 Liu_M_2018 Development and application of a simple recombinase polymerase amplification assay for rapid point-of-care detection of feline herpesvirus type 1 Liu, Meng-zhi; Han, Xiao-hu; Yao, Long-quan; Zhang, Wen-kui; Liu, Bao-shan; Chen, Ze-liang 2018 2018-10-09 PMC N PMC7086775 30302584.0 10.1007/s00705-018-4064-7 7cn23hcv 0.632405 Dinh_2011, Vemulapalli_2009, Falcone_1997, Benson_2008, Fan_Q_2012 Wang_2019, Stranieri_2017, Zhang_2014
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126 Gao_F_2018 Real-time isothermal detection of Abalone herpes-like virus and red-spotted grouper nervous necrosis virus using recombinase polymerase amplification Gao, Fang; Jiang, Jing-Zhe; Wang, Jiang-Yong; Wei, Hong-Ying 2018 2018-01-31 PMC N PMC7113691 28962967.0 10.1016/j.jviromet.2017.09.024 gf7ieivc 0.632015 Dinh_2011, Benson_2008, Wang_2018, Li_H_2019, Lau_L_2003 Zhang_2014, Wang_2017, Nemoto_2015
127 Thaitrong_2010 Integrated Capillary Electrophoresis Microsystem for Multiplex Analysis of Human Respiratory Viruses Thaitrong, Numrin; Liu, Peng; Briese, Thomas; Lipkin, Ian; Chiesl, Thomas N.; Higa, Yukiko; Mathies, Richard A. 2010 2010-12-15 PMC N PMC3076062 21114282.0 10.1021/ac1020744 0ebx61gb 0.631676 Wang_2018, Liu_H_2006, Lau_L_2003, Chen_2018, Ahberg_2015 Nemoto_2015, Jung_2015, Mori_2006
128 Zhuang_2019 Polymerase chain reaction combined with fluorescent lateral flow immunoassay based on magnetic purification for rapid detection of canine parvovirus 2 Zhuang, Linlin; Ji, Yongxin; Tian, Peilong; Wang, Kaixuan; Kou, Chengkun; Gu, Ning; Zhang, Yu 2019 2019-01-17 COMM-USE N PMC6337814 30654823.0 10.1186/s12917-019-1774-3 1c5ug64m 0.631279 Wang_2018, Dinh_2011, Lau_L_2003, Li_H_2019, Jiang_2004 Yang_2009, Malik_2013, Wang_2017
129 Yu_D_2012 Simultaneous Detection and Differentiation of Human Papillomavirus Genotypes 6, 11, 16 and 18 by AllGlo Quadruplex Quantitative PCR Yu, Daojun; Chen, Yu; Wu, Shenghai; Wang, Baohong; Tang, Yi-Wei; Li, Lanjuan 2012 2012-11-09 COMM-USE N PMC3494670 23152833.0 10.1371/journal.pone.0048972 iylw1bvw 0.630441 Wang_2018, Dinh_2011, Vemulapalli_2009, Jiang_2004, Benson_2008 Reddy_2011, Thuy_Tien_2018
130 Yang_2017 Development of a Quantitative Loop-Mediated Isothermal Amplification Assay for the Rapid Detection of Novel Goose Parvovirus Yang, Jing; Chen, Hao; Wang, Zhenzhong; Yu, Xianglong; Niu, Xiaoyu; Tang, Yi; Diao, Youxiang 2017 2017-12-12 COMM-USE N PMC5732990 29312182.0 10.3389/fmicb.2017.02472 i1qcanti 0.630120 Dinh_2011, Vemulapalli_2009, Chen_2010, Li_H_2019, Fan_Q_2012 Stranieri_2017, Nemoto_2015, Rivera_2013, Zhang_2014
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134 El-Tholoth_2019 Recombinase polymerase amplification–nucleic acid lateral flow immunoassays for Newcastle disease virus and infectious bronchitis virus detection El-Tholoth, Mohamed; Branavan, Manoharanehru; Naveenathayalan, Angel; Balachandran, Wamadeva 2019 2019-09-23 PMC N PMC7089497 31549369.0 10.1007/s11033-019-05085-y 1ur4tbwj 0.627000 Dinh_2011, Falcone_1997, Armesto_2007, Keep_2015, Keep_2014 Mu_Y_2014, Hou_P_2017
135 Zhang_2018 Clinical evaluation of a panel of multiplex quantitative real-time reverse transcription polymerase chain reaction assays for the detection of 16 respiratory viruses associated with community-acquired pneumonia Zhang, Dan; Mao, Haiyan; Lou, Xiuyu; Pan, Junhang; Yan, Hao; Tang, Hongfeng; Shu, Yan; Zhao, Yun; Cheng, Xiaoli; Tao, Hong; Zhang, Yanjun; Ma, Xuejun 2018 2018-06-30 PMC N PMC7087343 29961119.0 10.1007/s00705-018-3921-8 shwxhak9 0.625916 Lau_L_2003, Jiang_2004, Dinh_2011, Wang_2018 Gueudin_2003, Zhao_2019, Buesa_1996
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137 Ma_L_2019 Development of a SYBR green-based real-time RT-PCR assay for rapid detection of the emerging swine acute diarrhea syndrome coronavirus Ma, Lei; Zeng, Fanwen; Cong, Feng; Huang, Bihong; Huang, Ren; Ma, Jingyun; Guo, Pengju 2019 2019-03-31 PMC Y PMC7113735 30593837.0 10.1016/j.jviromet.2018.12.010 kzudasop 0.624527 Lau_L_2003, Jiang_2004, Dinh_2011, Wang_2018, Vemulapalli_2009 Zhou_2018, Nemoto_2015, Ma_L_2018
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140 Gumaa_2019 Establishment of a recombinase polymerase amplification (RPA) assay for the detection of Brucella spp. Infection Gumaa, M.M.; Cao, Xiaoan; Li, Zhaocai; Lou, Zhongzi; Zhang, Nianzhang; Zhang, Zhijun; Zhou, Jizhang; Fu, Baoquan 2019 2019-10-31 PMC N PMC7127669 31401295.0 10.1016/j.mcp.2019.101434 zx83almq 0.618852 Lau_L_2003, Benson_2008, Vemulapalli_2009, Wang_2018, Jiang_2004 Wang_2017, Zhang_2014, Liu_M_2018
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155 Kim_J_2019 A Simple and Multiplex Loop-Mediated Isothermal Amplification (LAMP) Assay for Rapid Detection of SARS-CoV Kim, Jin Hwa; Kang, Minhee; Park, Eunkyoung; Chung, Doo Ryeon; Kim, Jiyeon; Hwang, Eung Soo 2019 2019-11-11 PMC N PMC7097549 10.1007/s13206-019-3404-3 3doc40hx 0.603712 Dinh_2011, Nitsche_2004, Benson_2008, Emery_2004, Lau_L_2003 Nemoto_2015, Malik_2013, Mu_Y_2014
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171 Dupas_2019 Comparison of real-time PCR and droplet digital PCR for the detection of Xylella fastidiosa in plants Enora Dupas; Bruno Legendre; Valérie Olivier; Françoise Poliakoff; Charles Manceau; Amandine Cunty 2019 2019-03-20 BioRxiv N 10.1101/582288 0xc02kkb 0.591030 Benson_2008, Wang_2018, Thiel_2002, Borja_1992 Rodrigues_2011, Nemoto_2015
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213 Elia_2007 Detection of infectious canine parvovirus type 2 by mRNA real-time RT-PCR Elia, Gabriella; Cavalli, Alessandra; Desario, Costantina; Lorusso, Eleonora; Lucente, Maria Stella; Decaro, Nicola; Martella, Vito; Buonavoglia, Canio 2007 2007-12-31 PMC N PMC7112852 17692932.0 10.1016/j.jviromet.2007.06.017 6notzm6s 0.563270 Majerciak_2018, Falcone_1997, Endoh_2005, Borja_1992 Decaro_2004, Nemoto_2015, Decaro_2008
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222 Miao_2019 Rapid and Sensitive Recombinase Polymerase Amplification Combined With Lateral Flow Strip for Detecting African Swine Fever Virus Miao, Faming; Zhang, Jingyuan; Li, Nan; Chen, Teng; Wang, Lidong; Zhang, Fei; Mi, Lijuan; Zhang, Jinxia; Wang, Shuchao; Wang, Ying; Zhou, Xintao; Zhang, Yanyan; Li, Min; Zhang, Shoufeng; Hu, Rongliang 2019 2019-05-15 COMM-USE N PMC6530510 31156571.0 10.3389/fmicb.2019.01004 c99lszcu 0.557719 Lu_P_2016, Dinh_2011, Yasui_2016, Li_W_2012, Armesto_2007 Ren_X_2008, Hou_P_2018
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228 Ahmed_2014 Rapid Identification of Black Grain Eumycetoma Causative Agents Using Rolling Circle Amplification Ahmed, Sarah A.; van den Ende, Bert H. G. Gerrits; Fahal, Ahmed H.; van de Sande, Wendy W. J.; de Hoog, G. S. 2014 2014-12-04 COMM-USE N PMC4256478 25474355.0 10.1371/journal.pntd.0003368 va0teako 0.551641 Chang_2011, Lee_C_2017, Gardner_2004, Pandya_2007, Phillippy_2009 Sazmand_2019, Njiru_2008, Ghazisaeedi_2017
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230 Ding_2020 All-in-One Dual CRISPR-Cas12a (AIOD-CRISPR) Assay: A Case for Rapid, Ultrasensitive and Visual Detection of Novel Coronavirus SARS-CoV-2 and HIV virus Xiong Ding; Kun Yin; Ziyue Li; Changchun Liu 2020 2020-03-21 BioRxiv Y 10.1101/2020.03.19.998724 vlqd192g 0.551016 Tallmadge_2008, Rice_1992, Dinh_2011, Myint_1989, Lu_P_2016 Case_2017, Wang_2008, Anderson_2020
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237 Lucchi_2010 Real-Time Fluorescence Loop Mediated Isothermal Amplification for the Diagnosis of Malaria Lucchi, Naomi W.; Demas, Allison; Narayanan, Jothikumar; Sumari, Deborah; Kabanywanyi, Abdunoor; Kachur, S. Patrick; Barnwell, John W.; Udhayakumar, Venkatachalam 2010 2010-10-29 COMM-USE N PMC2966401 21060829.0 10.1371/journal.pone.0013733 av7ducrk 0.546227 Dinh_2011, Pandya_2007, Wong_2007, Lemmon_2008, Wang_2018 Oriero_2015, Mohon_2014, Wang_2013
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427 Lee_H_2010 Diagnostic Testing for Pandemic Influenza in Singapore A Novel Dual-Gene Quantitative Real-Time RT-PCR for the Detection of Influenza A/H1N1/2009 Lee, Hong Kai; Lee, Chun Kiat; Loh, Tze Ping; Tang, Julian Wei-Tze; Chiu, Lily; Tambyah, Paul A.; Sethi, Sunil K.; Koay, Evelyn Siew-Chuan 2010 2010-09-30 PMC N 10.2353/jmoldx.2010.100010 gjek77ny 0.444011 Walker_2010, Lu_P_2016, Yang_2010, Yasui_2016, Dinh_2011
428 Xiao_2014 Simultaneous Detection and Differentiation of Highly Virulent and Classical Chinese-Type Isolation of PRRSV by Real-Time RT-PCR Xiao, Shuqi; Chen, Yaosheng; Wang, Liangliang; Gao, Jintao; Mo, Delin; He, Zuyong; Liu, Xiaohong 2014 2014-06-12 COMM-USE N PMC4119655 25114934.0 10.1155/2014/809656 wf0vonkn 0.442821 Dinh_2011, Lu_P_2016, Yang_2010, Escutenaire_2006 Xiao_2008, Cho_K_2001, Zhou_2018
429 Zhu_X_2020 Reverse transcription loop-mediated isothermal amplification combined with nanoparticles-based biosensor for diagnosis of COVID-19 Xiong Zhu; Xiaoxia Wang; Limei Han; Ting Chen; Licheng Wang; Huan Li; Sha Li; Lvfen He; Xiaoying Fu; Shaojin Chen; Xing Mei; Hai Chen; Yi Wang 2020 2020-03-20 BioRxiv Y 10.1101/2020.03.17.20037796 fq11rhab 0.442747 Dinh_2011, Wang_2018, Li_H_2019, Benson_2008, Zhang_2011 Nemoto_2015, Shirato_2007, Stranieri_2017
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431 Lau_Y_2015 Colorimetric Detection of Dengue by Single Tube Reverse-Transcription-Loop-Mediated Isothermal Amplification Lau, Yee-Ling; Lai, Meng-Yee; Teoh, Boon-Teong; Abd-Jamil, Juraina; Johari, Jefree; Sam, Sing-Sin; Tan, Kim-Kee; AbuBakar, Sazaly 2015 2015-09-18 COMM-USE N PMC4575147 26384248.0 10.1371/journal.pone.0138694 1946zslt 0.441921 Dinh_2011, Chen_2010, Fan_Q_2012, Vemulapalli_2009, Lau_L_2003 Nemoto_2015, Malik_2013
432 Wang_2019 A multiplex real-time PCR assay for the detection and differentiation of the newly emerged porcine circovirus type 3 and continuously evolving type 2 strains in the United States Wang, Yin; Feng, Yuan; Zheng, Wanglong; Noll, Lance; Porter, Elizabeth; Potter, Megan; Cino, Giselle; Peddireddi, Lalitha; Liu, Xuming; Anderson, Gary; Bai, Jianfa 2019 2019-07-31 PMC N PMC7113677 30904590.0 10.1016/j.jviromet.2019.03.011 hzbh7s2t 0.441129 Vemulapalli_2009, Falcone_1997, Lau_L_2003, Kumar_2010 Cho_K_2001, Choudhary_2013, Huang_2009
433 Dauner_2015 Development of a pan-serotype reverse transcription loop-mediated isothermal amplification assay for the detection of dengue virus Dauner, Allison L.; Mitra, Indrani; Gilliland, Theron; Seales, Sajeewane; Pal, Subhamoy; Yang, Shih-Chun; Guevara, Carolina; Chen, Jiann-Hwa; Liu, Yung-Chuan; Kochel, Tadeusz J.; Wu, Shuenn-Jue L. 2015 2015-09-30 PMC N PMC7126901 26032430.0 10.1016/j.diagmicrobio.2015.05.004 vfznyyz6 0.440855 Dinh_2011, Wang_2018, Chen_2010, Lau_L_2003, Jiang_2004 Nemoto_2015, Shirato_2007
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437 Chen_2019 Thermally stable and uniform DNA amplification with picosecond laser ablated graphene rapid thermal cycling device Chen, Zhao-Chi; Chang, Tien-Li; Li, Ching-Hao; Su, Kai-Wen; Liu, Cheng-Che 2019 2019-12-15 PMC N PMC7126615 31629228.0 10.1016/j.bios.2019.111581 gr1eaj6k 0.439231 Liu_H_2006, Yeung_2006, Jiang_2011, Wu_L_2010 Yeung_2006, Wang_2017, Zanoli_2012, Mori_2006
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441 Nunez-Bajo_2020 Ultra-Low-Cost Integrated Silicon-based Transducer for On-Site, Genetic Detection of Pathogens Estefania Nunez-Bajo; Michael Kasimatis; Yasin Cotur; Tarek Asfour; Alex Collins; Ugur Tanriverdi; Max Grell; Matti Kaisti; Guglielmo Senesi; Karen Stevenson; Firat Guder 2020 2020-03-25 BioRxiv Y 10.1101/2020.03.23.002931 7a3wdduq 0.436951 Liu_H_2006, Wu_L_2010, Jiang_2011, Phillippy_2009, Nitsche_2004 Malik_2020, Zhou_2020, Chan_2016, Zhang_2019
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445 Li_C_2020 High sensitivity detection of coronavirus SARS-CoV-2 using multiplex PCR and a multiplex-PCR-based metagenomic method Chenyu Li; David N. Debruyne; Julia Spencer; Vidushi Kapoor; Lily Y. Liu; Bo Zhou; Lucie Lee; Rounak Feigelman; Grayson Burdon; Jeffrey Liu; Alejandra Oliva; Adam Borcherding; Hongdong Tan; Alexander E. Urban; Guoying Liu; Zhitong Liu 2020 2020-03-14 BioRxiv Y 10.1101/2020.03.12.988246 0hxan9rw 0.434518 Chang_2011, Schlub_2018, Gardner_2004, Lee_C_2017, Harel_2019 Nemoto_2015, Malik_2013
446 Ahn_S_2019 Rapid and simple colorimetric detection of multiple influenza viruses infecting humans using a reverse transcriptional loop-mediated isothermal amplification (RT-LAMP) diagnostic platform Ahn, Su Jeong; Baek, Yun Hee; Lloren, Khristine Kaith S.; Choi, Won-Suk; Jeong, Ju Hwan; Antigua, Khristine Joy C.; Kwon, Hyeok-il; Park, Su-Jin; Kim, Eun-Ha; Kim, Young-il; Si, Young-Jae; Hong, Seung Bok; Shin, Kyeong Seob; Chun, Sungkun; Choi, Young Ki; Song, Min-Suk 2019 2019-08-01 COMM-USE N PMC6669974 31370782.0 10.1186/s12879-019-4277-8 exf1mh36 0.434473 Lu_P_2016, Yang_2010, Yasui_2016, Walker_2010, van_Riel_2007 Shirato_2007, Mu_Y_2014, Malik_2013, Sharma_2018
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462 Sun_Y_2019 Simultaneous detection and differentiation of canine parvovirus and feline parvovirus by high resolution melting analysis Sun, Yaru; Cheng, Yuening; Lin, Peng; Zhang, Hewei; Yi, Li; Tong, Mingwei; Cao, Zhigang; Li, Shuang; Cheng, Shipeng; Wang, Jianke 2019 2019-05-10 COMM-USE N PMC6511188 31077252.0 10.1186/s12917-019-1898-5 4rc5qbcb 0.427915 Tallmadge_2008, Lu_P_2016, Dinh_2011, Crowe_2014, Ryu_W_2017 Zaher_2020, Balboni_2018, Streck_2013
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466 Wang_2016 A GeXP-Based Assay for Simultaneous Detection of Multiple Viruses in Hospitalized Children with Community Acquired Pneumonia Wang, Le; Zhao, Mengchuan; Shi, Zhongren; Feng, Zhishan; Guo, Weiwei; Yang, Shuo; Liu, Lanping; Li, Guixia 2016 2016-09-14 COMM-USE N PMC5023126 27627439.0 10.1371/journal.pone.0162411 nz6eqcdb 0.427310 Dinh_2011, Chieochansin_2010, Vemulapalli_2009, Auewarakul_2005, Li_W_2012 Luchsinger_2012, Wang_2017
467 Singh_2012 Multipurpose Instantaneous Microarray Detection of Acute Encephalitis Causing Viruses and Their Expression Profiles Singh, Desh Deepak; Jain, Amita 2012 2012-06-07 PMC N PMC7080014 22674173.0 10.1007/s00284-012-0154-z u2mfjhtj 0.425177 Djikeng_2009, Conzelmann_1996, Rice_1992, Castrignano_2015, Trobaugh_2017 Davidson_2019
468 Zhang_2017 A simple and rapid identification method for newly emerged porcine Deltacoronavirus with loop-mediated isothermal amplification Zhang, Fanfan; Ye, Yu; Song, Deping; Guo, Nannan; Peng, Qi; Li, Anqi; Zhou, Xingrong; Chen, Yanjun; Zhang, Min; Huang, Dongyan; Tang, Yuxin 2017 2017-09-21 COMM-USE N PMC5607838 28934984.0 10.1186/s40659-017-0135-6 1k9l0z5k 0.425141 Dinh_2011, Lu_P_2016, Escutenaire_2006, Ren_X_2011, Chen_2008 Stranieri_2017, Nemoto_2015, Zhao_2011, Wang_2015
469 Zhai_2004 Real-Time Polymerase Chain Reaction for Detecting SARS Coronavirus, Beijing, 2003 Zhai, Junhui; Briese, Thomas; Dai, Erhei; Wang, Xiaoyi; Pang, Xin; Du, Zongmin; Liu, Haihong; Wang, Jin; Wang, Hongxia; Guo, Zhaobiao; Chen, Zeliang; Jiang, Lingxiao; Zhou, Dongsheng; Han, Yanping; Jabado, Omar; Palacios, Gustavo; Lipkin, W. Ian; Yang, Ruifu 2004 2004-02-23 PMC N PMC3322935 15030701.0 10.3201/eid1002.030799 gk29idya 0.422419 Escutenaire_2006, Myint_1989, Dinh_2011, Emery_2004 Emery_2004, Pyrc_2011, Vemulapalli_2015
470 Lu_S_2020 Rapid detection of African swine fever virus using Cas12a-based portable paper diagnostics Lu, Shuhan; Li, Fang; Chen, Qiubing; Wu, Jing; Duan, Junyi; Lei, Xinlin; Zhang, Ying; Zhao, Dongming; Bu, Zhigao; Yin, Hao 2020 2020-04-07 COMM-USE N PMC7136273 10.1038/s41421-020-0151-5 e7jbm953 0.422281 Lu_P_2016, Yasui_2016, Dinh_2011, Tallmadge_2008, Karlsson_2012 Saijo_2007, Bai_J_2019, Wu_M_2018
471 Yu_X_2014 Nested-RT-PCR and Multiplex RT-PCR for Diagnosis of Rhinovirus Infection in Clinical Samples Yu, Xuelian; Ghildyal, Reena 2014 2014-09-09 PMC N PMC7120866 25261303.0 10.1007/978-1-4939-1571-2_2 ujf2vql5 0.421508 Dinh_2011, Jiang_2004, Wang_2018, Lau_L_2003, Majerciak_2018 Gueudin_2003, Shirato_2007
472 Soltan_2016 Comparison of electron microscopy, ELISA, real time RT-PCR and insulated isothermal RT-PCR for the detection of Rotavirus group A (RVA) in feces of different animal species Soltan, Mohamed A.; Tsai, Yun-Long; Lee, Pei-Yu A.; Tsai, Chuan-Fu; Chang, Hsiao-Fen G.; Wang, Hwa-Tang T.; Wilkes, Rebecca P. 2016 2016-09-30 PMC N PMC7113751 27180038.0 10.1016/j.jviromet.2016.05.006 6lxc2rj2 0.421048 Dinh_2011, Benson_2008, Vemulapalli_2009, Wang_2018, Fan_Q_2012 Gueudin_2003, Decaro_2004, Lorusso_2019
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474 Van_Balken_1979 Detection of coronavirus in calf faeces with a haemadsorption-elution-haemagglutination assay (HEHA) Van Balken, J.A.M.; De Leeuw, P.W.; Ellens, D.J.; Straver, P.J. 1979 1979-03-31 PMC N PMC7117374 10.1016/0378-1135(79)90037-3 91drf5ko 0.419122 Polverino_2017, Roberts_1988, Falcone_1997, Vemulapalli_2009 Sato_1984, Di_Martino_2009
475 Takano_2014 Use of recombinant nucleocapsid proteins for serological diagnosis of feline coronavirus infection by three immunochromatographic tests Takano, Tomomi; Ishihara, Yuka; Matsuoka, Masafumi; Yokota, Shoko; Matsuoka-Kobayashi, Yukie; Doki, Tomoyoshi; Hohdatsu, Tsutomu 2014 2014-02-28 PMC N PMC7113643 24516876.0 10.1016/j.jviromet.2013.10.014 k6wkpmpn 0.418895 Elia_2003, Pratelli_2002, Tuchiya_1991, Leibowitz_1983, Hohdatsu_1987 Xue_G_2013, Abdelwahab_2015
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477 Grover_2010 Oligonucleotide-based microarray for detection of plant viruses employing sequence-independent amplification of targets Grover, Veenita; Pierce, Margaret L.; Hoyt, Peter; Zhang, Fengqiu; Melcher, Ulrich 2010 2010-01-31 PMC N PMC7112940 19850081.0 10.1016/j.jviromet.2009.08.023 vrab6okz 0.418806 Rice_1992, Armesto_2007, Majerciak_2018, Keep_2015, Bickerton_2017 Engel_2010
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479 Faux_2011 Usefulness of Published PCR Primers in Detecting Human Rhinovirus Infection Faux, Cassandra E.; Arden, Katherine E.; Lambert, Stephen B.; Nissen, Michael D.; Nolan, Terry M.; Chang, Anne B.; Sloots, Theo P.; Mackay, Ian M. 2011 2011-02-23 PMC N PMC3204776 21291610.0 10.3201/eid1702.101123 zgapjjjw 0.418101 Dinh_2011, Thiel_2002, Onodera_2007, Whiteford_2005 Cho_K_2001, Pratelli_2002
480 Lamb_2020 Rapid Detection of Novel Coronavirus (COVID-19) by Reverse Transcription-Loop-Mediated Isothermal Amplification Laura E Lamb; Sarah N Bartolone; Elijah Ward; Michael B Chancellor 2020 2020-02-24 BioRxiv Y 10.1101/2020.02.19.20025155 6kpgt70s 0.417977 Dinh_2011, Lau_L_2003, Wang_2018, Jiang_2004, Li_H_2019 Nemoto_2015, Zhang_2011
481 López-Huertas_2005 Two RT-PCR based assays to detect human metapneumovirus in nasopharyngeal aspirates López-Huertas, María Rosa; Casas, Inmaculada; Acosta-Herrera, Belsy; García, María Luz; Coiras, María Teresa; Pérez-Breña, Pilar 2005 2005-10-31 PMC N PMC7112860 15961167.0 10.1016/j.jviromet.2005.05.004 7369h587 0.417096 Dinh_2011, Falcone_1997, Kamau_2019, Myint_1989, Vemulapalli_2009 Gueudin_2003
482 Taylor_2019 Analytical evaluation of the microarray-based FluChip-8G Influenza A+B Assay Taylor, Amber W.; Dawson, Erica D.; Blair, Rebecca H.; Johnson, James E.; Slinskey, Amelia H.; Smolak, Andrew W.; Toth, Evan; Liikanen, Kyle; Stoughton, Robert S.; Smith, Catherine; Talbot, Sarah; Rowlen, Kathy L. 2019 2019-11-30 PMC N PMC6779046 31271790.0 10.1016/j.jviromet.2019.113686 l3gz0l4b 0.416514 Yang_2010, Dinh_2011, Kang_2010, Lu_P_2016, Yasui_2016 Sails_2009, Li_J_2012, Saijo_2007
483 Parida_2012 Rapid and Real-time Detection of Human Viral Infections: Current Trends and Future Perspectives Parida, Manmohan; Shukla, Jyoti; Sharma, Shashi; Lakshmana Rao, P. V. 2012 2012-01-18 PMC N PMC7099323 10.1007/s40011-011-0015-8 3no082lg 0.416385 Djikeng_2009, Conzelmann_1996, Dugan_2012, May_E_2016 Parida_2008, Malik_2013, Peng_2015
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485 Kogaki_2005 Novel rapid immunochromatographic test based on an enzyme immunoassay for detecting nucleocapsid antigen in SARS‐associated coronavirus Kogaki, Hiroyuki; Uchida, Yoshiaki; Fujii, Nobuyuki; Kurano, Yoshihiro; Miyake, Kazushige; Kido, Yasuji; Kariwa, Hiroaki; Takashima, Ikuo; Tamashiro, Hiko; Ling, Ai‐Ee; Okada, Masahisa 2005 2005-01-01 PMC N PMC6807888 16025480.0 10.1002/jcla.20070 vf93zmtp 0.415316 Elia_2003, Leibowitz_1983, Fleming_1988, Czerny_1989, Tuchiya_1991 Saijo_2005, Lehmann_2008, Saijo_2007
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487 Zhou_2020 Programmable low-cost DNA-based platform for viral RNA detection Lifeng Zhou; Arun Richard Chandrasekaran; Jibin Abraham Punnoose; Gaston Bonenfant; Stephon Charles; Oksana Levchenko; Pheonah Badu; Cassandra Cavaliere; Cara T. Pager; Ken Halvorsen 2020 2020-01-16 BioRxiv N 10.1101/2020.01.12.902452 8kced06y 0.414236 Djikeng_2009, Rice_1992, Conzelmann_1996, Trobaugh_2017, Dykxhoorn_2006 van_der_Linden_2014, da_Silva_2019, Nemoto_2015, Zhong_2007
488 Nakauchi_2011 Rapid discrimination of oseltamivir‐resistant 275Y and ‐susceptible 275H substitutions in the neuraminidase gene of pandemic influenza A/H1N1 2009 virus by duplex one‐step RT‐PCR assay Nakauchi, Mina; Ujike, Makoto; Obuchi, Masatsugu; Takashita, Emi; Takayama, Ikuyo; Ejima, Miho; Oba, Kunihiro; Konomi, Nami; Odagiri, Takato; Tashiro, Masato; Kageyama, Tsutomu 2011 2011-05-12 PMC N PMC7167129 21567417.0 10.1002/jmv.22101 qa58kts6 0.413234 Lu_P_2016, Walker_2010, Yang_2010, Yasui_2016, Tallmadge_2008
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490 Engel_2010 A diagnostic oligonucleotide microarray for simultaneous detection of grapevine viruses Engel, Esteban A.; Escobar, Paula F.; Rojas, Luis A.; Rivera, Paulina A.; Fiore, Nicola; Valenzuela, Pablo D.T. 2010 2010-02-28 PMC N PMC7112925 19914293.0 10.1016/j.jviromet.2009.11.009 nx60hae0 0.412719 Rice_1992, Ryu_W_2017, Armesto_2007, Bickerton_2017, Keep_2015 Londoño_2016, Wu_H_2004
491 McAvin_2007 Deployable, Field-Sustainable, Reverse Transcription-Polymerase Chain Reaction Assays for Rapid Screening and Serotype Identification of Dengue Virus in Mosquitoes McAvin, James C.; Powers, Michael D.; Blow, Jamie A.; Putnam, John L.; Huff, William B.; Swaby, James A. 2007 2007-03-23 PMC N PMC7110365 17436782.0 10.7205/milmed.172.3.329 18azv910 0.412508 Izquierdo-Suzán_2019, Dinh_2011, Bergren_2018, Leemans_1999 Kurosaki_2017, Nemoto_2015, Malik_2013
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496 Bergallo_2016 Development of a degenerated TaqMan real‐time Q‐PCR for detection of bacteria‐free DNA in dialysis fluid Bergallo, Massimiliano; Loiacono, Elisa; Rizzo, Giovanna; Caiazzo, Marialuisa; Palladino, Giuseppe; Amore, Alessandro 2016 2016-12-15 PMC N PMC7161787 27067406.0 10.1002/bab.1498 suq8e7s7 0.409555 Brown_1984, Endoh_2005, Hofmann_1993, Payne_2017, Majerciak_2018
497 Xiao_2008 Rapid detection of a highly virulent Chinese-type isolate of Porcine Reproductive and Respiratory Syndrome virus by real-time reverse transcriptase PCR Xiao, Xing-Long; Wu, Hui; Yu, Yi-Gang; Cheng, Bang-Zhao; Yang, Xiao-Quan; Chen, Gu; Liu, Dong-Mei; Li, Xiao-Feng 2008 2008-04-30 PMC N PMC7119963 18313768.0 10.1016/j.jviromet.2008.01.009 irsb8vu0 0.409478 Dinh_2011, Vemulapalli_2009, Li_W_2012, Chieochansin_2010, Oba_M_2018 Ren_X_2008, Xiao_2014, Cho_K_2001
498 Verbeek_1988 Biotinylated and radioactive cDNA probes in the detection by hybridization of bovine enteric coronavirus Verbeek, Arnold; Tijssen, Peter 1988 1988-09-30 PMC N PMC7135618 3221884.0 10.1016/0890-8508(88)90005-9 x53v2cze 0.408810 Falcone_1997, Rice_1992, Banerjee_2001, Endoh_2005, Armesto_2007 Nowak_1984, Martinez_1993, Benfield_1991
499 Yan_Z_2006 Rapid quantitative detection of Yersinia pestis by lateral-flow immunoassay and up-converting phosphor technology-based biosensor Yan, Zhongqiang; Zhou, Lei; Zhao, Yongkai; Wang, Jing; Huang, Lihua; Hu, Kongxin; Liu, Haihong; Wang, Hong; Guo, Zhaobiao; Song, Yajun; Huang, Huijie; Yang, Ruifu 2006 2006-12-07 PMC N PMC7125792 10.1016/j.snb.2006.01.029 mh5rkhsg 0.408810 Jiang_2011, Liu_H_2006, Polverino_2017, Volmer_2010, Qi_Z_2018 Saijo_2007, Abdelwahab_2015, Wu_M_2018, Chen_2012
500 Hu_H_2018 Development of a one-step RT-PCR assay for detection of pancoronaviruses (α-, β-, γ-, and δ-coronaviruses) using newly designed degenerate primers for porcine and avian `fecal samples Hu, Hui; Jung, Kwonil; Wang, Qiuhong; Saif, Linda J.; Vlasova, Anastasia N. 2018 2018-06-30 PMC N PMC7113874 29499225.0 10.1016/j.jviromet.2018.02.021 xnp3ytp1 0.408644 Dinh_2011, Falcone_1997, Vemulapalli_2009, Armesto_2007, Rice_1992 Cho_K_2001, Zhou_2018, OKBA_2020
501 Pongsiri_2012 Multiplex real–time RT–PCR for detecting chikungunya virus and dengue virus Pongsiri, Piyathida; Praianantathavorn, Kesmanee; Theamboonlers, Apiradee; Payungporn, Sunchai; Poovorawan, Yong 2012 2012-05-31 PMC N PMC7128799 22546647.0 10.1016/s1995-7645(12)60055-8 u43ehmut 0.408566 Davaro_2013, Tallmadge_2008, Lu_P_2016, Yang_2010 Sails_2009, Nemoto_2015, Shirato_2007
502 Decaro_2005 Genotype-specific fluorogenic RT-PCR assays for the detection and quantitation of canine coronavirus type I and type II RNA in faecal samples of dogs Decaro, Nicola; Martella, Vito; Ricci, Dominga; Elia, Gabriella; Desario, Costantina; Campolo, Marco; Cavaliere, Nicola; Di Trani, Livia; Tempesta, Maria; Buonavoglia, Canio 2005 2005-12-31 PMC N PMC7112928 16024100.0 10.1016/j.jviromet.2005.06.005 hz8dr90g 0.408084 Benson_2008, Falcone_1997, Dinh_2011, Vemulapalli_2009 Decaro_2004, Nemoto_2015, Yi_L_2012
503 Abravanel_2018 Performance of a commercial assay for detecting and quantifying HEV RNA in faeces Abravanel, Florence; Lacipière, Audrey; Lhomme, Sébastien; Dubois, Martine; Minier, Luce; Peron, Jean-Marie; Alric, Laurent; Kamar, Nassim; Izopet, Jacques 2018 2018-12-31 PMC N PMC7106495 30336371.0 10.1016/j.jcv.2018.10.003 t6jvi1p8 0.407968 Borja_1992, Lau_L_2003, Esona_2013, Falcone_1997 Kim_J_2014, Decaro_2004, Xue_G_2013
504 McClenahan_2009 A capsid gene-based real-time reverse transcription polymerase chain reaction assay for the detection of marine vesiviruses in the Caliciviridae McClenahan, Shasta D.; Bok, Karin; Neill, John D.; Smith, Alvin W.; Rhodes, Crystal R.; Sosnovtsev, Stanislav V.; Green, Kim Y.; Romero, Carlos H. 2009 2009-10-31 PMC N 19410604.0 10.1016/j.jviromet.2009.04.026 68du67lw 0.407879 Rice_1992, Dinh_2011, Armesto_2007, Chieochansin_2010, Pulford_2004
505 Zhang_2019 Development and evaluation of a real-time RT-PCR and a field-deployable RT-insulated isothermal PCR for the detection of Seneca Valley virus Zhang, Jianqiang; Nfon, Charles; Tsai, Chuan-Fu; Lee, Chien-Hsien; Fredericks, Lindsay; Chen, Qi; Sinha, Avanti; Bade, Sarah; Harmon, Karen; Piñeyro, Pablo; Gauger, Phillip; Tsai, Yun-Long; Wang, Hwa-Tang Thomas; Lee, Pei-Yu Alison 2019 2019-05-24 COMM-USE N PMC6534938 31126297.0 10.1186/s12917-019-1927-4 htukgd5m 0.407316 Dinh_2011, Tallmadge_2008, Lu_P_2016, Ryu_W_2017, Yang_2010 Cho_K_2001, Gueudin_2003, Niu_P_2016
506 Choi_2008 Development of real-time PCR assays for detection and quantification of human bocavirus Choi, Jang-Hoon; Chung, Yoon-Seok; Kim, Ki-Soon; Lee, Wan-Ji; Chung, Il Yup; Oh, Hee-Bok; Kang, Chun 2008 2008-07-31 PMC N PMC7108235 18378492.0 10.1016/j.jcv.2008.02.010 6fpnmnwc 0.407006 Dinh_2011, Kamau_2019, Kang_2010, Zhang_2020, Escutenaire_2006 De_Vos_2009, Gueudin_2003
507 Fujino_2005 A simple method for the detection of measles virus genome by loop‐mediated isothermal amplification (LAMP) Fujino, Motoko; Yoshida, Naoko; Yamaguchi, Shinya; Hosaka, Norimitsu; Ota, Yoshinori; Notomi, Tsugunori; Nakayama, Tetsuo 2005 2005-05-18 PMC N PMC7166939 15902708.0 10.1002/jmv.20371 uknui1t6 0.406568 Falcone_1997, Dinh_2011, Armesto_2007, Keep_2015, Bickerton_2017
508 Yoda_2009 Application of a modified loop‐mediated isothermal amplification kit for detecting Norovirus genogroups I and II Yoda, Tomoko; Suzuki, Yasuhiko; Yamazaki, Kenji; Sakon, Naomi; Kanki, Masashi; Kase, Tetsuo; Takahashi, Kazuo; Inoue, Kiyoshi 2009 2009-10-25 PMC N PMC7166440 19856470.0 10.1002/jmv.21626 06vah7pq 0.405219 Dinh_2011, Wang_2018, Benson_2008, Song_2014, Lau_L_2003
509 Lung_2015 Insulated Isothermal Reverse Transcriptase PCR (iiRT‐PCR) for Rapid and Sensitive Detection of Classical Swine Fever Virus Lung, O.; Pasick, J.; Fisher, M.; Buchanan, C.; Erickson, A.; Ambagala, A. 2015 2015-01-27 PMC N PMC7169785 25644051.0 10.1111/tbed.12318 99cit4ig 0.404887 Lu_P_2016, Tallmadge_2008, Yasui_2016, Crowe_2014, van_Riel_2007
510 James_2018 Ebolavirus diagnosis made simple, comparable and faster than molecular detection methods: preparing for the future James, Ameh S.; Todd, Shawn; Pollak, Nina M.; Marsh, Glenn A.; Macdonald, Joanne 2018 2018-04-23 COMM-USE N PMC5914028 29685158.0 10.1186/s12985-018-0985-8 p2qhnt4f 0.404774 Lu_P_2016, Ye_F_2019, Tallmadge_2008, Ryu_W_2017, Dinh_2011 Zaher_2020
511 Teengam_2017 Multiplex Paper-Based Colorimetric DNA Sensor Using Pyrrolidinyl Peptide Nucleic Acid-Induced AgNPs Aggregation for Detecting MERS-CoV, MTB, and HPV Oligonucleotides Teengam, Prinjaporn; Siangproh, Weena; Tuantranont, Adisorn; Vilaivan, Tirayut; Chailapakul, Orawon; Henry, Charles S. 2017 2017-04-10 PMC N PMC7077925 28394582.0 10.1021/acs.analchem.7b00255 ggdd5rrb 0.404408 Jiang_2011, Liu_H_2006, Wu_L_2010, Stork_2011, Kutyavin_2006 Chen_2015, Mori_2006, Kim_H_2019
512 Choudhary_2013 Development of real-time RT-PCR for detection of human metapneumovirus and genetic analysis of circulating strains (2009-2011) in Pune, India Choudhary, Manohar Lal; Anand, Siddharth P.; Sonawane, Nupoor S.; Chadha, Mandeep S. 2013 2013-08-09 PMC N PMC7087245 23929232.0 10.1007/s00705-013-1812-6 4rbrzv5o 0.403953 Dinh_2011, Falcone_1997, Armesto_2007, Volmer_2010, Vemulapalli_2009 Gueudin_2003
513 Vabret_2001 Direct diagnosis of human respiratory coronaviruses 229E and OC43 by the polymerase chain reaction Vabret, Astrid; Mouthon, Franck; Mourez, Thomas; Gouarin, Stephanie; Petitjean, Joëlle; Freymuth, François 2001 2001-09-30 PMC N PMC7119936 11483217.0 10.1016/s0166-0934(01)00343-3 ccdj7137 0.403481 Kamau_2019, Zhang_2020, Myint_1989, Dinh_2011, Chieochansin_2010 Vallet_2004, Cho_K_2001, Gueudin_2003
514 Bian_2019 A new immunochromatographic assay for on-site detection of porcine epidemic diarrhea virus based on monoclonal antibodies prepared by using cell surface fluorescence immunosorbent assay Bian, Hongfen; Xu, Fei; Jia, Yumin; Wang, Lei; Deng, Shengchao; Jia, Aiqing; Tang, Yong 2019 2019-01-18 COMM-USE N PMC6339306 30658643.0 10.1186/s12917-019-1773-4 u0r7oh9z 0.403406 Dinh_2011, Elia_2003, Vemulapalli_2009, Benson_2008, Oba_M_2018 Okda_2016, Xu_F_2020, Chen_2012
515 Azhar_2020 Rapid, field-deployable nucleobase detection and identification using FnCas9 Mohd. Azhar; Rhythm Phutela; Asgar Hussain Ansari; Dipanjali Sinha; Namrata Sharma; Manoj Kumar; Meghali Aich; Saumya Sharma; Khushboo Singhal; Harsha Lad; Pradeep K. Patra; Govind Makharia; Giriraj Ratan Chandak; Debojyoti Chakraborty; Souvik Maiti 2020 2020-04-09 BioRxiv Y 10.1101/2020.04.07.028167 rfhtlodc 0.403255 Djikeng_2009, May_E_2016, Deng_2015, Chang_2011, Rajagopala_2015 Pyrc_2011, Wang_2019, Chandler-Brown_2020
516 Mauk_2015 Integrated Microfluidic Nucleic Acid Isolation, Isothermal Amplification, and Amplicon Quantification Mauk, Michael G.; Liu, Changchun; Song, Jinzhao; Bau, Haim H. 2015 2015-10-20 COMM-USE N PMC4996405 27600235.0 10.3390/microarrays4040474 ggtxuulg 0.402666 Wang_2018, Liu_H_2006, Chen_2018, Xu_L_2019, Horejsh_2005 Zanoli_2012, Zhang_2019, Wang_2011, Thaitrong_2010
517 Qiu_Y_2017 Detection of viromes of RNA viruses using the next generation sequencing libraries prepared by three methods Qiu, Yuan; Chen, Ji-Ming; Wang, Tong; Hou, Guang-Yu; Zhuang, Qing-Ye; Wu, Run; Wang, Kai-Cheng 2017 2017-06-02 PMC N PMC7111271 28501627.0 10.1016/j.virusres.2017.05.003 ecpicv5v 0.402141 Chen_2018, Endoh_2005, Thiel_2002, Falcone_1997, Chen_2016 Mikel_2015
518 Shi_R_2003 Design and application of 60mer oligonucleotide microarray in SARS coronavirus detection Shi, Rong; Ma, Wenli; Wu, Qinghua; Zhang, Bao; Song, Yanbin; Guo, Qiuye; Xiao, Weiwei; Wang, Yan; Zheng, Wenling 2003 2003-01-01 PMC N PMC7089259 10.1007/bf03183928 tk5kmqzc 0.402141 Brown_1984, Chen_2016, Endoh_2005, Jiang_2011, Armesto_2007 Wang_2009, Ren_X_2008, Loa_C_2004
519 WEI_Y_2016 A duplex RT-PCR assay for detection of H9 subtype avian influenza viruses and infectious bronchitis viruses WEI, Yan-di; GAO, Wei-hua; SUN, Hong-lei; YU, Chen-fang; PEI, Xing-yao; SUN, Yi-peng; LIU, Jin-hua; PU, Juan 2016 2016-09-30 PMC N PMC7128909 10.1016/s2095-3119(15)61316-8 3yfcwwye 0.399109 Lu_P_2016, Yasui_2016, van_Riel_2007, Tallmadge_2008, Crowe_2014 Ren_X_2008, Sun_J_2015
520 van_Boheemen_2012 A Family-Wide RT-PCR Assay for Detection of Paramyxoviruses and Application to a Large-Scale Surveillance Study van Boheemen, Sander; Bestebroer, Theo M.; Verhagen, Josanne H.; Osterhaus, Albert D. M. E.; Pas, Suzan D.; Herfst, Sander; Fouchier, Ron A. M. 2012 2012-04-04 COMM-USE N PMC3319594 22496880.0 10.1371/journal.pone.0034961 aotrkajb 0.398989 Dinh_2011, Rice_1992, Ryu_W_2017, Pulford_2004, Armesto_2007 Malik_2013, Zhang_2014
521 Wee_S_2020 Rapid direct nucleic acid amplification test without RNA extraction for SARS-CoV-2 using a portable PCR thermocycler Soon Keong Wee; Suppiah Paramalingam Sivalingam; Eric Peng Huat Yap 2020 2020-04-20 BioRxiv Y 10.1101/2020.04.17.042366 e1oinu71 0.398783 Wang_2018, Lau_L_2003, Jiang_2004, Dinh_2011, Nitsche_2004
522 Hu_Y_2005 Rapid approach to identify an unrecognized viral agent Hu, Yuan; Hirshfield, Irvin 2005 2005-07-31 PMC N PMC7112820 15893569.0 10.1016/j.jviromet.2005.02.016 7bm6ffvv 0.398080 Armesto_2007, Chen_2018, Rice_1992, Keep_2015 Lachheb_2019, Ren_X_2008
523 Pyrc_2007 Detection of New Viruses by VIDISCA: Virus Discovery Based on cDNA-Amplified Fragment Length Polymorphism Pyrc, Krzysztof; Jebbink, Maarten F.; Berkhout, Ben; van der Hoek, Lia 2007 2007-11-28 PMC N PMC7121709 19057862.0 10.1007/978-1-59745-181-9_7 nxutmxp6 0.398080 Majerciak_2018, Armesto_2007, Rice_1992, Keep_2015, Keep_2014 Hu_T_2012
524 Cui_A_2013 The Development and Application of the Two Real-Time RT-PCR Assays to Detect the Pathogen of HFMD Cui, Aili; Xu, Changping; Tan, Xiaojuan; Zhang, Yan; Zhu, Zhen; Mao, Naiying; Lu, Yiyu; Xu, Wenbo 2013 2013-04-18 COMM-USE N PMC3630163 23637836.0 10.1371/journal.pone.0061451 917uwsgx 0.397091 Yang_2010, Dinh_2011, Kamau_2019, Kang_2010, Lu_P_2016 Choudhary_2013, Rodrigues_2011
525 Loa_C_2015 A Multiplex Polymerase Chain Reaction for Differential Detection of Turkey Coronavirus from Chicken Infectious Bronchitis Virus and Bovine Coronavirus Loa, Chien Chang; Wu, Ching Ching; Lin, Tsang Long 2015 2015-09-10 PMC N PMC7122580 10.1007/978-1-4939-3414-0_12 8iahlshj 0.395932 Falcone_1997, Armesto_2007, Keep_2014, Bickerton_2017 Loa_C_2006, Cho_K_2001
526 Alcoba-Florez_2020 Fast SARS-CoV-2 detection by RT-qPCR in preheated nasopharyngeal swab samples Julia Alcoba-Florez; Rafaela Gonzalez-Montelongo; Antonio Inigo-Campos; Diego Garcia-Martinez de Artola; Helena Gil-Campesino; Laura Ciuffreda; Agustin Valenzuela-Fernandez; Carlos Flores 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.08.20058495 icpwfyss 0.395932 Wang_2018, Benson_2008, Chen_2018, Polverino_2017, Rajagopala_2015 Arumugam_2020, OKBA_2020, Nemoto_2015
527 Nakauchi_2014 Real-time RT-PCR assays for discriminating influenza B virus Yamagata and Victoria lineages Nakauchi, Mina; Takayama, Ikuyo; Takahashi, Hitoshi; Oba, Kunihiro; Kubo, Hideyuki; Kaida, Atsushi; Tashiro, Masato; Kageyama, Tsutomu 2014 2014-09-01 PMC N 24797457.0 10.1016/j.jviromet.2014.04.016 9gtx4bhp 0.395737 Yang_2010, Dinh_2011, Yasui_2016, Lu_P_2016, van_Riel_2007
528 Gibson_2011 Chapter fifteen Enzymatic Assembly of Overlapping DNA Fragments Gibson, Daniel G. 2011 2011-12-31 PMC N PMC7149801 21601685.0 10.1016/b978-0-12-385120-8.00015-2 1w54xw02 0.394955 Stork_2011, Thiel_2002, Otsuka_1999, Lee_J_2019 Pradeepkumar_2012, Moser_2012, Kutyavin_2006
529 Guo_L_2020 One-tube smart genetic testing via coupling isothermal amplification and three-way nucleic acid circuit to glucometers Guo, Lulu; Lu, Baiyang; Dong, Qing; Tang, Yidan; Du, Yan; Li, Bingling 2020 2020-04-15 PMC N PMC7094703 32145848.0 10.1016/j.aca.2020.01.068 xupeqtx3 0.394526 Rajagopala_2015, Chang_2011, Lee_C_2017, Phillippy_2009, Deng_2015 Du_Y_2015, Dong_2019, Zhang_2019, Mori_2006
530 Nakauchi_2019 Development of real‐time fluorescent reverse transcription loop‐mediated isothermal amplification assays for rhinovirus detection Nakauchi, Mina; Takayama, Ikuyo; Takahashi, Hitoshi; Semba, Shohei; Saito, Shinji; Kubo, Hideyuki; Kaida, Atsushi; Oba, Kunihiro; Nagata, Shiho; Odagiri, Takato; Kageyama, Tsutomu 2019 2019-02-22 PMC N PMC7166982 30735248.0 10.1002/jmv.25427 yahr10u5 0.393852 Dinh_2011, Naito_2007, Benson_2008, Vemulapalli_2009, Auewarakul_2005
531 Shulman_2012 Evaluation of Four Different Systems for Extraction of RNA from Stool Suspensions Using MS-2 Coliphage as an Exogenous Control for RT-PCR Inhibition Shulman, Lester M.; Hindiyeh, Musa; Muhsen, Khitam; Cohen, Dani; Mendelson, Ella; Sofer, Danit 2012 2012-07-16 COMM-USE N PMC3397973 22815706.0 10.1371/journal.pone.0039455 zl1s82yi 0.393539 Borja_1992, Falcone_1997, Bhudevi_2001, Vemulapalli_2009 Dye_C_2008, Buesa_1996, Mikel_2015
532 Zou_R_2019 DNA-programming multicolor silver nanoclusters for sensitively simultaneous detection of two HIV DNAs Zou, Rong; Zhang, Feng; Chen, Chunyan; Cai, Changqun 2019 2019-10-01 PMC N PMC7126789 10.1016/j.snb.2019.05.085 vwly4nha 0.392646 Jiang_2011, Liu_H_2006, Wu_L_2010, Kutyavin_2006 Kim_H_2019, Chen_2015, Teengam_2017, Mori_2006
533 Morabito_2013 Engineering Insights for Multiplexed Real-Time Nucleic Acid Sequence-Based Amplification (NASBA): Implications for Design of Point-of-Care Diagnostics Morabito, Kenneth; Wiske, Clay; Tripathi, Anubhav 2013 2013-05-16 PMC N PMC7099912 23677856.0 10.1007/s40291-013-0029-4 qvazsptq 0.392541 Polverino_2017, Lee_W_2008, Lemmon_2008, Kim_K_2007, Qi_Z_2018 Zhang_2019, Zambenedetti_2017, Zhang_2014
534 Horiuchi_2020 A novel loop-mediated isothermal amplification method for efficient and robust detection of EGFR mutations Horiuchi, Sho; Saito, Yuichi; Matsui, Atsuka; Takahashi, Nobumasa; Ikeya, Tomohiko; Hoshi, Eishin; Shimizu, Yoshihiko; Yasuda, Masanori 2020 2020-01-14 NONCOMM N PMC7010225 32124949.0 10.3892/ijo.2020.4961 4sltubqk 0.392399 Karaman_2005, Naito_2007, Dinh_2011, Benson_2008 Reddy_2011, Nemoto_2015, Zhou_2012
535 Clem_2007 Virus detection and identification using random multiplex (RT)-PCR with 3'-locked random primers Clem, Amy L; Sims, Jonathan; Telang, Sucheta; Eaton, John W; Chesney, Jason 2007 2007-06-28 COMM-USE N PMC1950496 17598900.0 10.1186/1743-422x-4-65 b8lesr2g 0.392229 Rice_1992, Majerciak_2018, Armesto_2007, Keep_2015, Bickerton_2017 Fallahi_2015, Majerciak_2018
536 Carr_2009 Development of a real-time RT-PCR for the detection of Swine-lineage Influenza A (H1N1) virus infections Carr, Michael J.; Gunson, Rory; Maclean, Alasdair; Coughlan, Suzie; Fitzgerald, Margaret; Scully, Mary; O’Herlihy, Brian; Ryan, John; O’Flanagan, Darina; Connell, Jeff; Carman, William F.; Hall, William W. 2009 2009-07-31 PMC N 19540799.0 10.1016/j.jcv.2009.06.001 px9h96wp 0.392104 Lu_P_2016, Walker_2010, Yang_2010, Yasui_2016, van_den_Brand_2010
537 Severgnini_2009 ORMA: a tool for identification of species-specific variations in 16S rRNA gene and oligonucleotides design Severgnini, Marco; Cremonesi, Paola; Consolandi, Clarissa; Caredda, Giada; De Bellis, Gianluca; Castiglioni, Bianca 2009 2009-06-16 NONCOMM N PMC2760787 19531738.0 10.1093/nar/gkp499 vrd89yk0 0.392082 Chang_2011, Phillippy_2009, Whiteford_2005, Karaman_2005, Saw_A_2019 Mukai_2006, Naidoo_2014, Najafzadeh_2018
538 Nanda_2008 Universal virus detection by degenerate-oligonucleotide primed polymerase chain reaction of purified viral nucleic acids Nanda, Santosh; Jayan, Geetha; Voulgaropoulou, Frosso; Sierra-Honigmann, Ana Maria; Uhlenhaut, Christine; McWatters, Bernard J.P.; Patel, Amita; Krause, Philip R. 2008 2008-09-30 PMC N 18601953.0 10.1016/j.jviromet.2008.06.007 mb7yi056 0.391738 Rice_1992, Armesto_2007, Tallmadge_2008, Bickerton_2017, Keep_2015
539 Claas_1992 Type-specific identification of influenza viruses A, B and C by the polymerase chain reaction Claas, E.C.J.; Sprenger, M.J.W.; Kletera, G.E.M.; Beek, R.Van; Quint, W.G.V.; Masurela, N. 1992 1992-09-30 PMC N 1430057.0 10.1016/0166-0934(92)90120-3 glimvjhl 0.391014 Dinh_2011, Falcone_1997, Armesto_2007, Kang_2010, Bickerton_2017 Sails_2009, Xue_G_2013
540 Xing_2016 Ultrasensitive Detection of Porcine Epidemic Diarrhea Virus from Fecal Samples Using Functionalized Nanoparticles Xing, Na; Guan, Xiaoxiao; An, Bin; Cui, Beibei; Wang, Zengguo; Wang, Xiaoya; Zhang, Xiujuan; Du, Qian; Zhao, Xiaomin; Huang, Yong; Tong, Dewen 2016 2016-12-09 COMM-USE N PMC5147876 27936019.0 10.1371/journal.pone.0167325 mkrpls2f 0.390111 Dinh_2011, Armesto_2007, Li_W_2012, Bickerton_2017, Keep_2015 Park_2007, Yuan_2015, Thimmasandra_Narayanappa_2015, Xu_F_2020
541 Lee_T_2006 DNA-based bioanalytical microsystems for handheld device applications Lee, Thomas Ming-Hung; Hsing, I-Ming 2006 2006-01-18 PMC N PMC7094345 17723328.0 10.1016/j.aca.2005.05.075 b6tr2zyx 0.389809 May_E_2016, Weinrich_2009, Monis_2006, Wu_W_2009 Yeung_2006, Deisingh_2009, Wang_2017, González-López_2020
542 Long_2004 A universal microarray for detection of SARS coronavirus Long, Wei-Hong; Xiao, Hua-Sheng; Gu, Xiao-Mei; Zhang, Qing-Hua; Yang, Hong-Jun; Zhao, Guo-Ping; Liu, Jian-Hua 2004 2004-10-31 PMC N PMC7112900 15350733.0 10.1016/j.jviromet.2004.06.016 n7zeshh3 0.389283 Xu_J_2016, Armesto_2007, Rice_1992, Gardner_2004, Majerciak_2018 Niemeyer_2018, Wang_2009, He_R_2003, Kliger_2003
543 Shalaby_2016 Recombinase polymerase amplification assay for rapid detection of lumpy skin disease virus Shalaby, Mohamed A.; El-Deeb, Ayman; El-Tholoth, Mohamed; Hoffmann, Donata; Czerny, Claus-Peter; Hufert, Frank T.; Weidmann, Manfred; Abd El Wahed, Ahmed 2016 2016-11-02 COMM-USE N PMC5094145 27806722.0 10.1186/s12917-016-0875-5 mvkao3ye 0.388249 Lu_P_2016, Davaro_2013, Ayers_2006, Crowe_2014, Dinh_2011 Hou_P_2017, Hakhverdyan_2005
544 Pulford_2004 Amplification refractory mutation system PCR assays for the detection of variola and Orthopoxvirus Pulford, David; Meyer, Hermann; Brightwell, Gale; Damon, Inger; Kline, Richard; Ulaeto, David 2004 2004-04-30 PMC N PMC7119807 15019263.0 10.1016/j.jviromet.2004.01.001 zarq507s 0.387981 Armesto_2007, Tallmadge_2008, Bickerton_2017, Keep_2014 Ren_X_2008
545 Kutyavin_2006 A novel endonuclease IV post-PCR genotyping system Kutyavin, Igor V.; Milesi, Dave; Belousov, Yevgeniy; Podyminogin, Mikhail; Vorobiev, Alexei; Gorn, Vladimir; Lukhtanov, Eugeny A.; Vermeulen, Nicolaas M. J.; Mahoney, Walt 2006 2006-09-29 None N PMC1636472 17012270.0 10.1093/nar/gkl679 kt9pmfdr 0.387629 Jiang_2011, Yang_2008, Wu_L_2010, Karaman_2005 Nowak_1984, Moser_2012
546 Nargessi_2010 MagaZorb: A simple tool for rapid isolation of viral nucleic acids Nargessi, Dokhi; Ou, Chin-Yih 2010 2010-04-15 PMC N PMC7110191 20225944.0 10.1086/650391 7ihcxsyf 0.387496 Djikeng_2009, Chen_2018, Monis_2006, Rice_1992, May_E_2016 Lewandowska_2017, Jordana-Lluch_2014, Zhong_2007
547 Wang_2018 Development of a sensitive and specific xMAP assay for detection of antibodies against infectious laryngotracheitis and bronchitis viruses Wang, Huanan; Cong, Feng; Guan, Jianchi; Xiao, Li; Zhu, Yujun; Lian, Yuexiao; Huang, Ren; Chen, Meili; Guo, Pengju 2018 2018-09-21 COMM-USE N PMC6151043 30241540.0 10.1186/s12985-018-1048-x eqqvwwh6 0.387223 Tallmadge_2008, Davaro_2013, Lu_P_2016, Yasui_2016, Hohdatsu_1987 Xue_G_2013
548 Daher_2016 Recombinase Polymerase Amplification for Diagnostic Applications Daher, Rana K; Stewart, Gale; Boissinot, Maurice; Bergeron, Michel G 2016 2016-07-01 PMC N PMC7108464 27160000.0 10.1373/clinchem.2015.245829 xk4w0iz5 0.386548 Djikeng_2009, May_E_2016, Weinrich_2009, Curcin_2005, Kosuri_2014 Abd_El_Wahed_2015, Wang_2019
549 Chen_2015 Development and Evaluation of a SYBR Green–Based Real-Time Multiplex RT-PCR Assay for Simultaneous Detection and Serotyping of Dengue and Chikungunya Viruses Chen, Huixin; Parimelalagan, Mariya; Lai, Yee Ling; Lee, Kim Sung; Koay, Evelyn Siew-Chuan; Hapuarachchi, Hapuarachchige C.; Ng, Lee Ching; Ho, Phui San; Chu, Justin Jang Hann 2015 2015-11-30 PMC N PMC7106138 26455921.0 10.1016/j.jmoldx.2015.06.008 z3js3mr4 0.385944 Lu_P_2016, Tallmadge_2008, Yang_2010, Ryu_W_2017, Crowe_2014 Yang_2009, Nemoto_2015, Neeraja_2015
550 Poon_2004 Detection of SARS Coronavirus in Patients with Severe Acute Respiratory Syndrome by Conventional and Real-Time Quantitative Reverse Transcription-PCR Assays Poon, Leo L M; Chan, Kwok Hung; Wong, On Kei; Cheung, Timothy K W; Ng, Iris; Zheng, Bojian; Seto, Wing Hong; Yuen, Kwok Yung; Guan, Yi; Peiris, Joseph S M 2004 2004-01-01 PMC Y PMC7108136 14709637.0 10.1373/clinchem.2003.023663 s7qauqll 0.385751 Lau_L_2003, Dinh_2011, Jiang_2004, Vemulapalli_2009, Falcone_1997 Keyaerts_2006, Poon_2003, Gueudin_2003, Cho_K_2001
551 Beltran-Pavez_2020 SARS-CoV-2 detection from nasopharyngeal swab samples without RNA extraction Carolina Beltran-Pavez; Chantal L. Marquez; Gabriela Munoz; Fernando Valiente-Echeverria; Aldo Gaggero; Ricardo Soto-Rifo; Gonzalo P. Barriga 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.28.013508 pg6893i5 0.385565 Polverino_2017, Dinh_2011, Benson_2008, Erlandsson_2011 OKBA_2020, Xu_D_2005, Xing_2020
552 Mukai_2006 Identification of Mycobacterium species by comparative analysis of the dnaA gene Mukai, Tetsu; Miyamoto, Yuji; Yamazaki, Toshio; Makino, Masahiko 2006 2006-01-01 PMC N PMC7109704 16445750.0 10.1111/j.1574-6968.2005.00031.x ln92w6gm 0.385158 Naidoo_2014, Chieochansin_2010, Gardner_2004, Nicholson_2014 Naidoo_2014, Ren_X_2008, Sazmand_2019
553 Liu_P_2018 A novel multiplex PCR for virus detection by melting curve analysis Liu, Pengcheng; Lu, Lijuan; Xu, Menghua; Zhong, Huaqing; Jia, Ran; Su, Liyun; Cao, Lingfeng; Dong, Zuoquan; Dong, Niuniu; Zhou, Linfu; Xu, Jin 2018 2018-12-31 PMC N PMC7113878 30267725.0 10.1016/j.jviromet.2018.09.010 a8yfi2wn 0.384887 Dinh_2011, Benson_2008, Vemulapalli_2009, Lau_L_2003, Wang_2018 Sails_2009, Li_J_2012, Gueudin_2003
554 Naguib_2017 New real time and conventional RT-PCRs for updated molecular diagnosis of infectious bronchitis virus infection (IBV) in chickens in Egypt associated with frequent co-infections with avian influenza and Newcastle Disease viruses Naguib, Mahmoud M.; El-Kady, Magdy F.; Lüschow, Dörte; Hassan, Kareem E.; Arafa, Abdel-Satar; El-Zanaty, Ali; Hassan, Mohamed K.; Hafez, Hafez M.; Grund, Christian; Harder, Timm C. 2017 2017-07-31 PMC N PMC7113857 28336367.0 10.1016/j.jviromet.2017.02.018 k23engcx 0.384155 Kamau_2019, Dinh_2011, Armesto_2007, Falcone_1997 Ren_X_2008, Lachheb_2019, Cho_K_2001
555 Butt_2020 Development of a dual-gene loop-mediated isothermal amplification (LAMP) detection assay for SARS-CoV-2: A preliminary study Azeem Mehmood Butt; Shafiqa Siddique; Xiaoping An; Yigang Tong 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.08.20056986 fc338qdt 0.383744 Dinh_2011, Jiang_2004, Lau_L_2003, Fan_Q_2012, Benson_2008 Kim_J_2019, Nemoto_2015, Keyaerts_2006
556 OKINO_2018 Rapid detection and differentiation of avian infectious bronchitis virus: an application of Mass genotype by melting temperature analysis in RT-qPCR using SYBR Green I OKINO, Cintia Hiromi; MONTASSIER, Maria de Fátima Silva; de OLIVEIRA, Andressa Peres; MONTASSIER, Helio José 2018 2018-02-27 NONCOMM N PMC5938207 29491226.0 10.1292/jvms.17-0566 8bssrn9o 0.383324 Dinh_2011, Tallmadge_2008, Lu_P_2016, Yasui_2016, Falcone_1997 Ren_X_2008, Nemoto_2015
557 Kusano_2007 Immunochromatographic assay for simple and rapid detection of Satsuma dwarf virus and related viruses using monoclonal antibodies Kusano, Nario; Hirashima, Keita; Kuwahara, Minoru; Narahara, Kenji; Imamura, Tadashi; Mimori, Tomohiro; Nakahira, Ken; Torii, Kuniaki 2007 2007-02-16 PMC N PMC7087811 10.1007/s10327-006-0316-6 z4fpy607 0.383324 Fleming_1988, Leibowitz_1983, Czerny_1989, Elia_2003 Xue_G_2013, Thuy_Tien_2018
558 da_Silva_2019 Loop-Mediated Isothermal Amplification (LAMP) for the Diagnosis of Zika Virus: A Review da Silva, Severino Jefferson Ribeiro; Pardee, Keith; Pena, Lindomar 2019 2019-12-23 COMM-USE N PMC7019470 31877989.0 10.3390/v12010019 yxuyhc7p 0.383197 Dinh_2011, Djikeng_2009, Belák_1993, Mori_2009, Wu_W_2009 Stranieri_2017, Kurosaki_2017, Nemoto_2015
559 Chen_2011 Detection and Identification of Common Food-Borne Viruses with a Tiling Microarray Chen, Haifeng; Mammel, Mark; Kulka, Mike; Patel, Isha; Jackson, Scott; Goswami, Biswendu B. 2011 2011-05-16 NONCOMM N PMC3109525 21660190.0 10.2174/1874357901105010052 ycs5rtoc 0.382835 Djikeng_2009, Rice_1992, Li_L_2014, Leiva-Torres_2017 Giles_2015, Engel_2010, Sazmand_2019
560 Choi_2018 Recent Trends in Nanomaterials‐Based Colorimetric Detection of Pathogenic Bacteria and Viruses Choi, Yoojin; Hwang, Ji Hyeon; Lee, Sang Yup 2018 2018-03-08 PMC N PMC7169612 10.1002/smtd.201700351 rf1o5ioi 0.382575 Conzelmann_1996, Djikeng_2009, UNKNOWN_2004, May_E_2016, Sharon_2010
561 Asano_2010 Multiplex semi-nested RT-PCR with exogenous internal control for simultaneous detection of bovine coronavirus and group A rotavirus Asano, Karen Miyuki; de Souza, Sibele Pinheiro; de Barros, Iracema Nunes; Ayres, Giselle Razera; Silva, Sheila Oliveira Souza; Richtzenhain, Leonardo José; Brandão, Paulo E. 2010 2010-11-30 PMC N PMC7119652 20723564.0 10.1016/j.jviromet.2010.08.008 zw0my8cq 0.382265 Dinh_2011, Falcone_1997, Escutenaire_2006, Vemulapalli_2009, Lau_L_2003 Cho_K_2001, Takiuchi_2006
562 Decaro_2006 A minor groove binder probe real-time PCR assay for discrimination between type 2-based vaccines and field strains of canine parvovirus Decaro, Nicola; Elia, Gabriella; Desario, Costantina; Roperto, Sante; Martella, Vito; Campolo, Marco; Lorusso, Alessio; Cavalli, Alessandra; Buonavoglia, Canio 2006 2006-09-30 PMC N PMC7119799 16682086.0 10.1016/j.jviromet.2006.03.030 3br89vgb 0.381950 Rice_1992, Armesto_2007, Dinh_2011, Keep_2015, Bickerton_2017 Yi_L_2012, Cho_K_2001
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566 Oyhenart_2013 Loop mediated isothermal amplification of 5.8S rDNA for specific detection of Tritrichomonas foetus Oyhenart, Jorge; Martínez, Florencia; Ramírez, Rosana; Fort, Marcelo; Breccia, Javier D. 2013 2013-03-31 PMC N PMC7116945 23265811.0 10.1016/j.vetpar.2012.11.034 enof432p 0.380491 Leemans_1999, Shin_1993, Fallahi_2015, Benson_2008, Dalpke_2016 Njiru_2008, Stranieri_2017, Rivera_2013
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569 Erlandsson_2011 The Microbial Detection Array Combined with Random Phi29-Amplification Used as a Diagnostic Tool for Virus Detection in Clinical Samples Erlandsson, Lena; Rosenstierne, Maiken W.; McLoughlin, Kevin; Jaing, Crystal; Fomsgaard, Anders 2011 2011-08-10 COMM-USE N PMC3154197 21853040.0 10.1371/journal.pone.0022631 ngn9x3lc 0.378321 Rice_1992, Dinh_2011, Naito_2007, Urisman_2005 Giles_2015, Li_J_2012, Lewandowska_2017
570 Escutenaire_2006 SYBR Green real-time reverse transcription-polymerase chain reaction assay for the generic detection of coronaviruses Escutenaire, S.; Mohamed, N.; Isaksson, M.; Thorén, P.; Klingeborn, B.; Belák, S.; Berg, M.; Blomberg, J. 2006 2006-08-28 PMC N PMC7087200 16941059.0 10.1007/s00705-006-0840-x ubg3mj4u 0.377450 Garcia–Moliner_2013, Crowe_2014, Pillaiyar_2020, Lu_P_2016 Nemoto_2015, Chen_2015, Hanaki_2013
571 Yu_X_2017 A Nanostructured Microfluidic Immunoassay Platform for Highly Sensitive Infectious Pathogen Detection Yu, Xu; Xia, Yiqiu; Tang, Yi; Zhang, Wen‐Long; Yeh, Yin‐Ting; Lu, Huaguang; Zheng, Si‐Yang 2017 2017-06-21 None N PMC7169616 28636164.0 10.1002/smll.201700425 06544dq1 0.376390 Ketteler_2010, Conzelmann_1996, Siridechadilok_2013, Dinh_2011, Naito_2007
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573 CHEN_2010 Use of a Multiplex RT-PCR Assay for Simultaneous Detection of the North American Genotype Porcine Reproductive and Respiratory Syndrome Virus, Swine Influenza Virus and Japanese Encephalitis Virus CHEN, Hong-ying; WEI, Zhan-yong; ZHANG, Hong-ying; LÜ, Xiao-li; ZHENG, Lan-lan; CUI, Bao-an; LIU, Jinpeng; ZHU, Qian-lei; WANG, Zi-xin 2010 2010-07-31 PMC N PMC7129351 10.1016/s1671-2927(09)60189-9 91ypig4r 0.374336 Dinh_2011, Falcone_1997, Vemulapalli_2009, Kang_2010, Lau_L_2003 Zhao_2019
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583 Chao_2015 Development of Recombinase Polymerase Amplification Assays for Detection of Orientia tsutsugamushi or Rickettsia typhi Chao, Chien-Chung; Belinskaya, Tatyana; Zhang, Zhiwen; Ching, Wei-Mei 2015 2015-07-10 COMM-USE N PMC4498641 26161793.0 10.1371/journal.pntd.0003884 8lcdx719 0.369385 Shin_1993, Parthasarathy_2006, Benson_2008, Vemulapalli_2009, Lau_L_2003 Gumaa_2019, Wang_2017, Zhang_2014
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611 Ziros_2011 Development of an optimized method for the detection of airborne viruses with real-time PCR analysis Ziros, Panos G; Kokkinos, Petros A; Legaki, Euaggelia; Vantarakis, Apostolos 2011 2011-07-27 COMM-USE N PMC3199808 21794150.0 10.1186/1743-422x-8-369 ntv2veww 0.359747 Rice_1992, Oba_M_2018, Mizutani_2007, Dinh_2011, Armesto_2007 Li_J_2012, Wu_M_2018, Rheem_2012
612 Drake_2011 Activatable Optical Probes for the Detection of Enzymes Drake, Christopher R.; Miller, David C.; Jones, Ella F. 2011 2011-08-01 PMC N PMC3601828 23519774.0 10.2174/157017911796117232 m6pvfbod 0.359585 Haasnoot_2010, Sztuba-Solinska_2019, Moon_2012, UNKNOWN_2004 Manzoor_2018, Dijkgraaf_2013, Kim_H_2019
613 Chutinimitkul_2007 H5N1 Oseltamivir-resistance detection by real-time PCR using two high sensitivity labeled TaqMan probes Chutinimitkul, Salin; Suwannakarn, Kamol; Chieochansin, Thaweesak; Mai, Le Quynh; Damrongwatanapokin, Sudarat; Chaisingh, Arunee; Amonsin, Alongkorn; Landt, Olfert; Songserm, Thaweesak; Theamboonlers, Apiradee; Poovorawan, Yong 2007 2007-01-31 PMC N PMC7112789 17055070.0 10.1016/j.jviromet.2006.09.007 rjp2d1u9 0.359142 Dinh_2011, Yasui_2016, Lu_P_2016, Armesto_2007, Yang_2010 Carr_2008, Zhou_2012, Qi_Y_2014
614 Hoang_2018 A SimpleProbe(®) real‐time PCR assay for differentiating the canine parvovirus type 2 genotype Hoang, Minh; Wu, Hung‐Yi; Lien, Ying‐Xiu; Chiou, Ming‐Tang; Lin, Chao‐Nan 2018 2018-08-31 NONCOMM N PMC6430354 30168193.0 10.1002/jcla.22654 407bgxzx 0.358954 David_2013, Choudhury_2011, Abou-Hamdan_2018, Largo_2016, Morozov_1995 Zaher_2020, Hoang_2019, Lin_C_2014
615 You_H_2017 Simultaneous detection of respiratory syncytial virus and human metapneumovirus by one-step multiplex real-time RT-PCR in patients with respiratory symptoms You, Huey-Ling; Chang, Shun-Jen; Yu, Hong-Ren; Li, Chia-Chin; Chen, Chang-Han; Liao, Wei-Ting 2017 2017-03-27 COMM-USE N PMC5368990 28347279.0 10.1186/s12887-017-0843-7 y9jro9gt 0.358617 Dinh_2011, Yang_2010, Kang_2010, Song_2014, Chen_2010 Shirato_2007, Gueudin_2003, Dayakar_2016
616 Zhang_2018 Metagenomic analysis of viral nucleic acid extraction methods in respiratory clinical samples Zhang, Dan; Lou, Xiuyu; Yan, Hao; Pan, Junhang; Mao, Haiyan; Tang, Hongfeng; Shu, Yan; Zhao, Yun; Liu, Lei; Li, Junping; Chen, Jiang; Zhang, Yanjun; Ma, Xuejun 2018 2018-10-25 COMM-USE N PMC6202819 30359242.0 10.1186/s12864-018-5152-5 1vo72gop 0.358162 Armesto_2007, Majerciak_2018, Chen_2018, Rice_1992, Keep_2014 Souza_2019
617 Mikel_2016 Preparation of MS2 Phage-Like Particles and Their Use As Potential Process Control Viruses for Detection and Quantification of Enteric RNA Viruses in Different Matrices Mikel, Pavel; Vasickova, Petra; Tesarik, Radek; Malenovska, Hana; Kulich, Pavel; Vesely, Tomas; Kralik, Petr 2016 2016-12-01 COMM-USE N PMC5234545 28133456.0 10.3389/fmicb.2016.01911 970934vm 0.357930 Rice_1992, Stork_2011, Payne_2017, Majerciak_2018, Armesto_2007 Mikel_2015, Zambenedetti_2017, Schoenike_1999
618 Komissarov_2017 Development of a realtime RT-PCR assay for the rapid detection of influenza A(H2) viruses Komissarov, Andrey; Fadeev, Artem; Kosheleva, Anna; Sintsova, Kseniya; Grudinin, Mikhail 2017 2017-10-31 PMC N PMC7126497 28652020.0 10.1016/j.mcp.2017.06.005 ozv0zp7r 0.357681 Lu_P_2016, Yang_2010, Dinh_2011, Yasui_2016, Walker_2010 Shirato_2007, Sails_2009
619 Barra_2020 Analytical sensibility and specificity of two RT-qPCR protocols for SARS-CoV-2 detection performed in an automated workflow Gustavo Barcelos Barra; Ticiane Henriques Santa Rita; Pedro Goes Mesquita; Rafael Henriques Jacomo; Lidia Freire Abdalla Nery 2020 2020-03-10 BioRxiv Y 10.1101/2020.03.07.20032326 kv77pw7y 0.356975 Polverino_2017, Lee_C_2017, Chang_2011, Dinh_2011, Mendizabal-Ruiz_2018 OKBA_2020, Vogels_2020, Wu_Q_2004, Poon_2003
620 Pedrero_2011 Magnetic Beads‐Based Electrochemical Sensors Applied to the Detection and Quantification of Bioterrorism/Biohazard Agents Pedrero, María; Campuzano, Susana; Pingarrón, José M. 2011 2011-11-18 PMC N PMC7163718 10.1002/elan.201100528 z2h7mjng 0.356736 Gupta_2009, UNKNOWN_2019, Mwabu_2008, Weber_2009, Alves_2007
621 Kauppinen_2005 Locked nucleic acid (LNA): High affinity targeting of RNA for diagnostics and therapeutics Kauppinen, Sakari; Vester, Birte; Wengel, Jesper 2005 2005-11-30 PMC N PMC7105916 24981949.0 10.1016/j.ddtec.2005.08.012 5fartuzf 0.355886 Stork_2011, Gibson_2011, Wang_2017, Kutyavin_2006 Elmén_2005, Nan_Y_2018, Falzarano_2014
622 Muradrasoli_2009 Broadly targeted multiprobe QPCR for detection of coronaviruses: Coronavirus is common among mallard ducks (Anas platyrhynchos) Muradrasoli, Shaman; Mohamed, Nahla; Hornyák, Ákos; Fohlman, Jan; Olsen, Björn; Belák, Sándor; Blomberg, Jonas 2009 2009-08-31 PMC N PMC7112901 19406168.0 10.1016/j.jviromet.2009.04.022 cfdhxey1 0.354945 Rice_1992, Armesto_2007, Wang_2015, Majerciak_2018, Dinh_2011 Stranieri_2017, Cho_K_2001, Nemoto_2015, Lorusso_2019
623 Yu_L_2020 Rapid colorimetric detection of COVID-19 coronavirus using a reverse tran-scriptional loop-mediated isothermal amplification (RT-LAMP) diagnostic plat-form: iLACO Lin Yu; Shanshan Wu; Xiaowen Hao; Xuelong Li; Xiyang Liu; Shenglong Ye; Heng Han; Xue Dong; Xin Li; Jiyao Li; Jianmin Liu; Na Liu; Wanzhong Zhang; Vicent Pelechano; Wei-Hua Chen; Xiushan Yin 2020 2020-02-24 BioRxiv Y 10.1101/2020.02.20.20025874 s7uqawbd 0.352866 Lu_P_2016, Dinh_2011, Lee_C_2017, Bradbury_2003, Karlsson_2012 OKBA_2020, Rockx_2020, Niemeyer_2018, Keyaerts_2006
624 XIANG_2012 A novel double antibody sandwich-lateral flow immunoassay for the rapid and simple detection of hepatitis C virus XIANG, TINGXIU; JIANG, ZHENG; ZHENG, JIAN; LO, CHAOYU; TSOU, HARRY; REN, GUOSHENG; ZHANG, JUN; HUANG, AILONG; LAI, GUOQI 2012 2012-09-06 COMM-USE N PMC3573733 22960954.0 10.3892/ijmm.2012.1121 2586thss 0.352846 Elia_2003, Pratelli_2002, Leibowitz_1983, Vemulapalli_2009, Hohdatsu_1987 Abdelwahab_2015, Saijo_2007, Fournier_2007
625 Haist_2015 Strand-Specific Quantitative Reverse Transcription-Polymerase Chain Reaction Assay for Measurement of Arenavirus Genomic and Antigenomic RNAs Haist, Kelsey; Ziegler, Christopher; Botten, Jason 2015 2015-05-15 COMM-USE N PMC4433285 25978311.0 10.1371/journal.pone.0120043 531twx5p 0.352377 Rice_1992, Stork_2011, Armesto_2007, Keep_2015, Keep_2014 Schoenike_1999, Nowak_1984
626 Mengelle_2012 Prospective evaluation of a new automated nucleic acid extraction system using routine clinical respiratory specimens Mengelle, C.; Mansuy, J.‐M.; Sandres‐Sauné, K.; Barthe, C.; Boineau, J.; Izopet, J. 2012 2012-04-12 PMC N PMC7166974 22499014.0 10.1002/jmv.23281 7qd8bc6w 0.351995 Garcia–Moliner_2013, Yang_2010, Davaro_2013, Dinh_2011
627 Wang_2020 Simultaneous and automated detection of influenza A virus hemagglutinin H7 and H9 based on magnetism and size mediated microfluidic chip Wang, Shuibing; Ai, Zhao; Zhang, Zefen; Tang, Man; Zhang, Nangang; Liu, Feng; Han, Gujing; Hong, Shao-Li; Liu, Kan 2020 2020-04-01 PMC N PMC7125920 10.1016/j.snb.2020.127675 bf9r0gtx 0.351775 Yasui_2016, Lu_P_2016, Tallmadge_2008, Dinh_2011, Rice_1992 Bushnell_2010, Han_T_2011, Saijo_2007
628 Kim_H_2019 Development of Label-Free Colorimetric Assay for MERS-CoV Using Gold Nanoparticles Kim, Hanbi; Park, Minseon; Hwang, Joonki; Kim, Jin Hwa; Chung, Doo-Ryeon; Lee, Kyu-sung; Kang, Minhee 2019 2019-05-07 PMC N PMC7119221 31062580.0 10.1021/acssensors.9b00175 w4tn03w0 0.351305 Jiang_2011, Liu_H_2006, Wu_L_2010, Kutyavin_2006, Polverino_2017 Shafagati_2014, Petrosova_2007, Gopinath_2014, Shafagati_2015
629 Lu_Q_2008 A sensitive array-based assay for identifying multiple TMPRSS2:ERG fusion gene variants Lu, Qing; Nunez, Esperanza; Lin, Chunrun; Christensen, Kimberly; Downs, Tracy; Carson, Dennis A.; Wang-Rodriguez, Jessica; Liu, Yu-Tsueng 2008 2008-09-15 NONCOMM N PMC2582611 18794177.0 10.1093/nar/gkn585 nv228vte 0.351290 Volmer_2010, Wang_2007, Brake_2008, Haasnoot_2010, Trobaugh_2017 Deiab_2013, Leu_S_2010, Kido_2003, Horiuchi_2020
630 Kim_K_2007 A LAD-based method for selecting short oligo probes for genotyping applications Kim, Kwangsoo; Ryoo, Hong Seo 2007 2007-06-01 PMC N PMC7080176 10.1007/s00291-007-0089-0 nfxcqsc2 0.351260 Kim_K_2007, Chang_2011, Mendizabal-Ruiz_2018, Pandya_2007 Kim_K_2007, Phillippy_2009, Kutyavin_2006, Tan_J_2009
631 Jansen_2011 Development and evaluation of a four-tube real time multiplex PCR assay covering fourteen respiratory viruses, and comparison to its corresponding single target counterparts Jansen, Rogier R.; Schinkel, Janke; Koekkoek, Sylvie; Pajkrt, Dasja; Beld, Marcel; Jong, Menno D. de; Molenkamp, Richard 2011 2011-07-31 PMC N PMC7108253 21571585.0 10.1016/j.jcv.2011.04.010 5g9mbmov 0.350829 Dinh_2011, Lau_L_2003, Benson_2008, Jiang_2004, Wang_2018 Li_J_2012, Sails_2009, Rheem_2012
632 Klaus_2016 Highly Sensitive Assay for Measurement of Arenavirus-cell Attachment Klaus, Joseph P.; Botten, Jason 2016 2016-03-02 PMC N PMC4828211 26966937.0 10.3791/53682 sv5uftvw 0.349970 Tallmadge_2008, Rice_1992, den_Boon_2010, Volmer_2010, Stork_2011 van_der_Linden_2014, Berger_Rentsch_2011
633 Yu_F_2018 Comparative Evaluation of Three Preprocessing Methods for Extraction and Detection of Influenza A Virus Nucleic Acids from Sputum Yu, Fei; Qiu, Ting; Zeng, Ying; Wang, Yiyin; Zheng, Shufa; Chen, Xiao; Chen, Yu 2018 2018-03-02 COMM-USE N PMC5840144 29552562.0 10.3389/fmed.2018.00056 0kt9b1ww 0.349970 Wu_G_2005, Auewarakul_2005, Volmer_2010, Oba_M_2018, Callison_1999 Thakore_2018, Chiu_2006
634 Sharma_2015 Efficiency of Airborne Sample Analysis Platform (ASAP) bioaerosol sampler for pathogen detection Sharma, Anurag; Clark, Elizabeth; McGlothlin, James D.; Mittal, Suresh K. 2015 2015-05-27 COMM-USE N PMC4444837 26074900.0 10.3389/fmicb.2015.00512 t0nj7zmc 0.348841 Brucker_2020, Karlsson_2012, Lu_P_2016, Bradbury_2003, Dinh_2011 Bing-Yuan_2018, Shafagati_2015, Thevenin_2013, Blachere_2007
635 Jones_2011 Development and Validation of RT‐PCR Tests for the Detection and S1 Genotyping of Infectious Bronchitis Virus and Other Closely Related Gammacoronaviruses Within Clinical Samples Jones, R. M.; Ellis, R. J.; Cox, W. J.; Errington, J.; Fuller, C.; Irvine, R. M.; Wakeley, P. R. 2011 2011-04-07 PMC N PMC7169724 21477114.0 10.1111/j.1865-1682.2011.01222.x yjt3q9ph 0.348840 Dinh_2011, Vemulapalli_2009, Falcone_1997, Armesto_2007, Benson_2008
636 Papadopoulos_1999 Rhinovirus identification by BglI digestion of picornavirus RT-PCR amplicons Papadopoulos, N.G.; Hunter, J.; Sanderson, G.; Meyer, J.; Johnston, S.L. 1999 1999-07-31 PMC N 10471027.0 10.1016/s0166-0934(99)00045-2 xacgssrc 0.348840 Brown_1984, Armesto_2007, Keep_2015, Bickerton_2017, Auewarakul_2005
637 Gholami_2018 Preparation and Evaluation of Ribonuclease-Resistant Viral HIV RNA Standards Based on Armored RNA Technology Gholami, Mohammad; Ravanshad, Mehrdad; Baesi, Kazem; Samiee, Siamak M.; Rozbahani, Negin Hosseini; Mohraz, Minoo 2018 2018-11-23 COMM-USE N PMC6305816 29776310.0 10.29252/.22.6.394 l53ff8gs 0.347846 Armesto_2007, Keep_2014, Keep_2015, Bickerton_2017, Stork_2011 Tzeng_2006, Nowak_1984, Lazouskaya_2014
638 Coiras_2004 Simultaneous detection of fourteen respiratory viruses in clinical specimens by two multiplex reverse transcription nested‐PCR assays Coiras, M.T.; Aguilar, J.C.; García, M.L.; Casas, I.; Pérez‐Breña, P. 2004 2004-01-09 PMC N PMC7166637 14748074.0 10.1002/jmv.20008 oa36019p 0.347586 Lu_P_2016, Crowe_2014, Ryu_W_2017, Tallmadge_2008, van_Riel_2007
639 Hornyák_2012 Detection of subgenomic mRNA of feline coronavirus by real-time polymerase chain reaction based on primer-probe energy transfer (P-sg-QPCR) Hornyák, Ákos; Bálint, Ádám; Farsang, Attila; Balka, Gyula; Hakhverdyan, Mikhayil; Rasmussen, Thomas Bruun; Blomberg, Jonas; Belák, Sándor 2012 2012-05-31 PMC N PMC7112857 22349594.0 10.1016/j.jviromet.2012.01.022 fvq8hezk 0.346378 Volmer_2010, Grewelle_2020, Rice_1992, Gardner_2004, Auewarakul_2005 Stranieri_2017, Lorusso_2019, Martinez_1993
640 Carr_2008 Rapid molecular detection of the H275Y oseltamivir resistance gene mutation in circulating influenza A (H1N1) viruses Carr, Michael J.; Sayre, Naomi; Duffy, Margaret; Connell, Jeff; Hall, William W. 2008 2008-11-30 PMC N PMC7112815 18718489.0 10.1016/j.jviromet.2008.07.011 yvmdh7xh 0.344962 Walker_2010, Lu_P_2016, Dinh_2011, Yasui_2016, Yang_2010 Zhou_2012, Lachheb_2019, Qi_Y_2014
641 Han_G_2013 Absolute and Relative Quantification of Multiplex DNA Assays Based on an Elemental Labeling Strategy Han, Guojun; Zhang, Sichun; Xing, Zhi; Zhang, Xinrong 2013 2013-01-28 PMC N PMC7159584 23239546.0 10.1002/anie.201206903 5dtwje1b 0.342596 David_2013, Abou-Hamdan_2018, Choudhury_2011, Largo_2016, Liu_H_2006
642 Scheltinga_2005 Diagnosis of human metapneumovirus and rhinovirus in patients with respiratory tract infections by an internally controlled multiplex real-time RNA PCR Scheltinga, S.A.; Templeton, K.E.; Beersma, M.F.C.; Claas, E.C.J. 2005 2005-08-31 PMC N 15994117.0 10.1016/j.jcv.2004.08.021 in29sfj7 0.342411 Lau_L_2003, Dinh_2011, Vemulapalli_2009, Jiang_2004, Benson_2008 Gueudin_2003, You_H_2017
643 Lau_L_2004 Nucleic acid sequence-based amplification methods to detect avian influenza virus Lau, Lok-Ting; Banks, Jill; Aherne, Rebecca; Brown, Ian H.; Dillon, Natalie; Collins, Richard A.; Chan, Ka-Yun; Fung, Yin-Wan Wendy; Xing, Jun; Yu, Albert C.H. 2004 2004-01-09 PMC N PMC7111163 14684165.0 10.1016/j.bbrc.2003.11.131 g8v47wrz 0.342053 Lu_P_2016, Yasui_2016, Tallmadge_2008, van_Riel_2007, Karlsson_2012 Ren_X_2008, Lachheb_2019, Van_Hoeven_2009
644 Zhong_2007 Viral RNA extraction for in-the-field analysis Zhong, Jiang F.; Weiner, Leslie P.; Burke, Kathy; Taylor, Clive R. 2007 2007-09-30 None N PMC3635480 17548117.0 10.1016/j.jviromet.2007.04.006 zduf4f73 0.341841 Rice_1992, Wang_2018, Majerciak_2018, Trobaugh_2017, Payne_2017 Mikel_2015, Majerciak_2018
645 Carossino_2017 Evaluation of a field-deployable reverse transcription-insulated isothermal PCR for rapid and sensitive on-site detection of Zika virus Carossino, Mariano; Li, Yanqiu; Lee, Pei-Yu A.; Tsai, Chuan-Fu; Chou, Pin-Hsing; Williams, Dennis; Skillman, Ashley; Frank Cook, R.; Brown, Grayson; Chang, Hsiao-Fen G.; Wang, Hwa-Tang T.; Balasuriya, Udeni B. R. 2017 2017-12-19 COMM-USE N PMC5735522 29258444.0 10.1186/s12879-017-2852-4 bbgcen1u 0.341690 David_2013, Choudhury_2011, Abou-Hamdan_2018, Largo_2016, Hull_2008 da_Silva_2019, Kurosaki_2017, Zhang_2014
646 Minosse_2007 Improved detection of human influenza A and B viruses in respiratory tract specimens by hemi-nested PCR Minosse, Claudia; Selleri, Marina; Zaniratti, Maria S.; Lauria, Francesco N.; Puro, Vincenzo; Carletti, Fabrizio; Cappiello, Giuseppina; Gualano, Gina; Bevilacqua, Nazario; Capobianchi, Maria R. 2007 2007-05-31 PMC N PMC7119638 17257688.0 10.1016/j.jviromet.2006.12.010 7aaj8anv 0.341084 Yang_2010, Dinh_2011, Kang_2010, Yasui_2016 Sails_2009, Shirato_2007, Gueudin_2003
647 Boyle_2014 Rapid Detection of Mycobacterium tuberculosis by Recombinase Polymerase Amplification Boyle, David S.; McNerney, Ruth; Teng Low, Hwee; Leader, Brandon Troy; Pérez-Osorio, Ailyn C.; Meyer, Jessica C.; O'Sullivan, Denise M.; Brooks, David G.; Piepenburg, Olaf; Forrest, Matthew S. 2014 2014-08-13 COMM-USE N PMC4138011 25118698.0 10.1371/journal.pone.0103091 jg4txydn 0.340814 Jung_2015, Tan_J_2011, Wang_2018, Win_K_2011, Pandya_2007 Gelaw_2017
648 Pham_2018 Microdevice‐based solid‐phase polymerase chain reaction for rapid detection of pathogenic microorganisms Pham, Quang Nghia; Trinh, Kieu The Loan; Jung, Seung Won; Lee, Nae Yoon 2018 2018-06-06 PMC N PMC7161830 29777597.0 10.1002/bit.26734 tgqlda6p 0.340463 Wang_2018, Liu_H_2006, Wu_L_2010, Benson_2008, Chen_2018
649 Sampath_2005 Rapid Identification of Emerging Pathogens: Coronavirus Sampath, Rangarajan; Hofstadler, Steven A.; Blyn, Lawrence B.; Eshoo, Mark W.; Hall, Thomas A.; Massire, Christian; Levene, Harold M.; Hannis, James C.; Harrell, Patina M.; Neuman, Benjamin; Buchmeier, Michael J.; Jiang, Yun; Ranken, Raymond; Drader, Jared J.; Samant, Vivek; Griffey, Richard H.; McNeil, John A.; Crooke, Stanley T.; Ecker, David J. 2005 2005-03-23 PMC N PMC3298233 15757550.0 10.3201/eid1103.040629 ll6lkhyd 0.340255 Rice_1992, Armesto_2007, Kamau_2019, Dinh_2011, Falcone_1997 OKBA_2020, Keyaerts_2006, Wolk_2012
650 Adachi_2004 Comprehensive detection and identification of human coronaviruses, including the SARS-associated coronavirus, with a single RT-PCR assay Adachi, D.; Johnson, G.; Draker, R.; Ayers, M.; Mazzulli, T.; Talbot, P.J.; Tellier, R. 2004 2004-12-01 PMC N PMC7112817 15488617.0 10.1016/j.jviromet.2004.07.008 nvilxnzl 0.339767 Lu_P_2016, Kamau_2019, Crowe_2014, Zhang_2020, Lee_H_2010 OKBA_2020, Blanchard_2011, Pyrc_2011, Lehmann_2008
651 Zambenedetti_2017 Internal control for real-time polymerase chain reaction based on MS2 bacteriophage for RNA viruses diagnostics Zambenedetti, Miriam Ribas; Pavoni, Daniela Parada; Dallabona, Andreia Cristine; Dominguez, Alejandro Correa; Poersch, Celina de Oliveira; Fragoso, Stenio Perdigão; Krieger, Marco Aurélio 2017 2017-04-06 COMM-USE N PMC5398160 28403327.0 10.1590/0074-02760160380 mtk3qxue 0.339146 Rice_1992, Armesto_2007, Majerciak_2018, Keep_2014, Keep_2015 Mikel_2015, Wang_2015
652 Cornelissen_2017 Mycoplasma detection by triplex real-time PCR in bronchoalveolar lavage fluid from bovine respiratory disease complex cases Cornelissen, Jan B. W. J.; de Bree, Freddy M.; van der Wal, Fimme J.; Kooi, Engbert A.; Koene, Miriam G. J.; Bossers, Alex; Smid, Bregtje; Antonis, Adriaan F.; Wisselink, Henk J. 2017 2017-04-08 COMM-USE N PMC5385097 28390431.0 10.1186/s12917-017-1023-6 a0r4xh1c 0.339146 Dalpke_2016, Shin_1993, Cunningham_2013, McElroy_2005 Kilic_2020, Lorusso_2019, Gueudin_2003
653 Inui_2019 A field‐deployable insulated isothermal RT‐PCR assay for identification of influenza A (H7N9) shows good performance in the laboratory Inui, Ken; Nguyen, Tung; Tseng, Hsin‐Jou; Tsai, ChuanFu Mark; Tsai, Yun‐Long; Chung, Simon; Padungtod, Pawin; Zhu, Huachen; Guan, Yi; Kalpravidh, Wantanee; Claes, Filip 2019 2019-09-05 COMM-USE N PMC6800302 31487118.0 10.1111/irv.12646 q2ilk6gs 0.338958 Lu_P_2016, Davaro_2013, Yasui_2016, Tallmadge_2008, Yang_2010 Ng_L_2006, Cho_K_2001
654 Sakurai_2013 Broad-Spectrum Detection of H5 Subtype Influenza A Viruses with a New Fluorescent Immunochromatography System Sakurai, Akira; Takayama, Katsuyoshi; Nomura, Namiko; Munakata, Tsubasa; Yamamoto, Naoki; Tamura, Tsuruki; Yamada, Jitsuho; Hashimoto, Masako; Kuwahara, Kazuhiko; Sakoda, Yoshihiro; Suda, Yoshihiko; Kobayashi, Yukuharu; Sakaguchi, Nobuo; Kida, Hiroshi; Kohara, Michinori; Shibasaki, Futoshi 2013 2013-11-06 COMM-USE N PMC3819354 24223117.0 10.1371/journal.pone.0076753 g7ouajja 0.338817 Lu_P_2016, Yasui_2016, Tallmadge_2008, Ryu_W_2017, Karlsson_2012 Thuy_Tien_2018, Saijo_2007, Xue_G_2013, Sails_2009
655 Ylihärsilä_2013 Genotyping of clinically relevant human adenoviruses by array-in-well hybridization assay Ylihärsilä, M.; Harju, E.; Arppe, R.; Hattara, L.; Hölsä, J.; Saviranta, P.; Soukka, T.; Waris, M. 2013 2013-06-30 PMC N PMC7129513 22712766.0 10.1111/j.1469-0691.2012.03926.x 4rx4bfwx 0.338462 Abou-Hamdan_2018, David_2013, Choudhury_2011, Largo_2016 Ahluwalia_1994, Reddy_2011, Bergallo_2016
656 Deng_2018 A multiplex PCR method for the simultaneous detection of three viruses associated with canine viral enteric infections Deng, Xiaoyu; Zhang, Jiali; Su, Jiazi; Liu, Hao; Cong, Yanlong; Zhang, Lei; Zhang, Kemeng; Shi, Ning; Lu, Rongguang; Yan, Xijun 2018 2018-04-19 PMC N PMC7086948 29675651.0 10.1007/s00705-018-3828-4 4wefykbi 0.337962 Kamau_2019, Tallmadge_2008, Dinh_2011, Crowe_2014, Escutenaire_2006 Zaher_2020, Cho_K_2001, Yi_L_2012
657 Liu_J_2020 Development of a rapid immunochromatographic strip test for the detection of porcine epidemic diarrhea virus specific SIgA in colostrum Liu, Jianbo; Gao, Ran; Shi, Hongyan; Cong, Guangyi; Chen, Jianfei; Zhang, Xin; Shi, Da; Cao, Liyan; Wang, Xiaobo; Zhang, Jialin; Ji, Zhaoyang; Jing, Zhaoyang; Feng, Li 2020 2020-05-31 PMC N PMC7151449 32173373.0 10.1016/j.jviromet.2020.113855 441aclcc 0.337962 Hu_W_2013, Hohdatsu_1987, Leibowitz_1983, Wrammert_2011, Shin_1993 Chen_2012, Xue_G_2013
658 Feng_2018 A multiplex one-tube nested real time RT-PCR assay for simultaneous detection of respiratory syncytial virus, human rhinovirus and human metapneumovirus Feng, Zhi-shan; Zhao, Li; Wang, Ji; Qiu, Fang-zhou; Zhao, Meng-chuan; Wang, Le; Duan, Su-xia; Zhang, Rui-qing; Chen, Chen; Qi, Ju-Ju; Fan, Tao; Li, Gui-xia; Ma, Xue-jun 2018 2018-10-30 COMM-USE N PMC6208169 30376870.0 10.1186/s12985-018-1061-0 9hmzu7t6 0.337085 Bellau-Pujol_2005, Yang_2010, Garcia–Moliner_2013, Kang_2010, Song_2014 Gueudin_2003, You_H_2017, Shirato_2007, Zhao_2019
659 Laconi_2020 Infectious bronchitis virus Mass-type (GI-1) and QX-like (GI-19) genotyping and vaccine differentiation using SYBR green RT-qPCR paired with melting curve analysis Laconi, Andrea; Berends, Alinda J.; de Laat, Esther C.H.; Urselmann, Tara A.P.M.P.; Verheije, Hélène M. 2020 2020-01-31 PMC N PMC7113787 31712091.0 10.1016/j.jviromet.2019.113771 n9q99hdn 0.336981 Lu_P_2016, Tallmadge_2008, Yasui_2016, Dinh_2011, Karlsson_2012 Ren_X_2008, Lachheb_2019, Laconi_2020
660 Kurosaki_2017 Development and evaluation of a rapid molecular diagnostic test for Zika virus infection by reverse transcription loop-mediated isothermal amplification Kurosaki, Yohei; Martins, Danyelly Bruneska Gondim; Kimura, Mayuko; Catena, Andriu dos Santos; Borba, Maria Amélia Carlos Souto Maior; Mattos, Sandra da Silva; Abe, Haruka; Yoshikawa, Rokusuke; de Lima Filho, José Luiz; Yasuda, Jiro 2017 2017-10-18 COMM-USE N PMC5647432 29044149.0 10.1038/s41598-017-13836-9 lrkscs71 0.336102 Dinh_2011, Lu_P_2016, Karlsson_2012, Yang_2010, Ayers_2006 Nemoto_2015, Malik_2013
661 Gueudin_2003 Quantitation of respiratory syncytial virus RNA in nasal aspirates of children by real-time RT-PCR assay Gueudin, M; Vabret, A; Petitjean, J; Gouarin, S; Brouard, J; Freymuth, F 2003 2003-04-30 PMC N PMC7119593 12668266.0 10.1016/s0166-0934(03)00042-9 3p6q92x4 0.335986 Lau_L_2003, Vemulapalli_2009, Jiang_2004, Kang_2010 Shirato_2007, Sails_2009, Mu_Y_2014
662 Tao_C_2014 A rapid one‐step immunochromatographic test strip for rabies detection using canine serum samples Tao, C.; Li, G. 2014 2014-06-02 PMC N PMC7165885 24820246.0 10.1111/lam.12282 q3pn9e9c 0.335526 Polverino_2017, Volmer_2010, Hu_W_2013, Unkauf_2016, Goradia_1988
663 Sha_M_2005 Encoded metal nanoparticle-based molecular beacons for multiplexed detection of DNA Sha, Michael Y.; Yamanaka, Mark; Walton, Ian D.; Norton, Scott M.; Stoermer, Rebecca L.; Keating, Christine D.; Natan, Michael J.; Penn, Sharron G. 2005 2005-01-01 PMC N PMC7091129 10.1385/nbt:1:4:327 eta0ubmp 0.333770 Stork_2011, Armesto_2007, Keep_2015, Keep_2014, Pong_2011 Chen_2015, Bao_M_2020, Kim_H_2019, Stoermer_2006
664 Giles_2015 Development of a DNA-based microarray for the detection of zoonotic pathogens in rodent species Giles, Timothy; Yon, Lisa; Hannant, Duncan; Barrow, Paul; Abu-Median, Abu-Bakr 2015 2015-12-31 PMC N PMC7127396 26188129.0 10.1016/j.mcp.2015.07.005 xo1cyzrg 0.333758 Djikeng_2009, Pandya_2007, Urisman_2005, Phillippy_2009 Lee_J_2017, Sazmand_2019, Li_J_2012
665 Hakhverdyan_2005 Evaluation of a single-tube fluorogenic RT-PCR assay for detection of bovine respiratory syncytial virus in clinical samples Hakhverdyan, Mikhayil; Hägglund, Sara; Larsen, Lars-Erik; Belák, Sándor 2005 2005-02-28 PMC N PMC7112851 15620402.0 10.1016/j.jviromet.2004.09.016 zz7mt6be 0.331013 Dinh_2011, Vemulapalli_2009, Chen_2010, Benson_2008, Kang_2010 Gueudin_2003, Cho_K_2001, Sails_2009
666 Bannister_2018 Development and Assessment of a Diagnostic DNA Oligonucleotide Microarray for Detection and Typing of Meningitis-Associated Bacterial Species Bannister, Stephanie A.; Kidd, Stephen P.; Kirby, Elizabeth; Shah, Sonal; Thomas, Anvy; Vipond, Richard; Elmore, Michael J.; Telfer Brunton, Andrew; Marsh, Peter; Green, Steve; Silman, Nigel J.; Kempsell, Karen E. 2018 2018-10-16 COMM-USE N PMC6306750 30332776.0 10.3390/ht7040032 tekezab8 0.331013 Benson_2008, Pandya_2007, Erlandsson_2011, Priest_2012, Gardner_2004 Shin_2011, Xue_G_2013, Uhlenhaut_2009, Wang_2017
667 Pan_Y_2006 Differentially profiling the low-expression transcriptomes of human hepatoma using a novel SSH/microarray approach Pan, Yi-Shin; Lee, Yun-Shien; Lee, Yung-Lin; Lee, Wei-Chen; Hsieh, Sen-Yung 2006 2006-05-31 COMM-USE N PMC1522022 16737534.0 10.1186/1471-2164-7-131 9r62ffew 0.330523 Yu_H_2007, Wang_2007, Phillippy_2009, Karaman_2005, Price_2019 McCuaig_1993, Bruder_2010, Rimstad_1995, Trypsteen_2016
668 Hashemzadeh_2016 Development of Dual TaqMan Based One-Step rRT-PCR Assay Panel for Rapid and Accurate Diagnostic Test of MERS-CoV: A Novel Human Coronavirus, Ahead of Hajj Pilgrimage Hashemzadeh, Mohammad Sadegh; Rasouli, Rahimeh; Zahraei, Bentolhoda; Izadi, Morteza; Tat, Mahdi; Saadat, Seyed Hassan; Najarasl, Mohammad; Khansari Nejad, Behzad; Dorostkar, Ruhollah 2016 2016-06-21 NONCOMM N PMC5292137 28191331.0 10.5812/ircmj.23874 ne9dpwtf 0.330274 Dinh_2011, Armesto_2007, Majerciak_2018, Keep_2014, Nitsche_2004 Shirato_2014, Zhou_2018
669 Jayamohan_2012 Applications of Microfluidics for Molecular Diagnostics Jayamohan, Harikrishnan; Sant, Himanshu J.; Gale, Bruce K. 2012 2012-08-09 PMC N PMC7121806 23329451.0 10.1007/978-1-62703-134-9_20 ylxqh3sj 0.329824 Sánchez_Barea_2019, May_E_2016, Giannitelli_2018, Weinrich_2009 Wang_2012, Wang_2011, Shafagati_2014, Ding_2017
670 Jun_B_2012 Fluorescence-Based Multiplex Protein Detection Using Optically Encoded Microbeads Jun, Bong-Hyun; Kang, Homan; Lee, Yoon-Sik; Jeong, Dae Hong 2012 2012-03-01 COMM-USE N PMC6268487 22382526.0 10.3390/molecules17032474 f14ips7d 0.329391 May_E_2016, Weinrich_2009, Wu_W_2009, Sánchez_Barea_2019 Wang_2012, Shi_H_2010, Kim_J_2015, Huang_2017
671 Vogels_2020 Analytical sensitivity and efficiency comparisons of SARS-COV-2 qRT-PCR assays Chantal B.F. Vogels; Anderson F. Brito; Anne Louise Wyllie; Joseph R Fauver; Isabel M. Ott; Chaney C. Kalinich; Mary E. Petrone; Marie-Louise Landry; Ellen F. Foxman; Nathan D. Grubaugh 2020 2020-04-01 BioRxiv Y 10.1101/2020.03.30.20048108 6mdimxnk 0.328799 Polverino_2017, Dinh_2011, Chang_2011, Gardner_2004, Lee_C_2017 OKBA_2020, Nemoto_2015, Wu_Q_2004, Keyaerts_2006
672 Wang_2019 Development of a real-time loop-mediated isothermal amplification assay for detection of porcine circovirus 3 Wang, Huanan; Liu, Xiangnan; Zeng, Fanwen; Zhang, Tongyuan; Lian, Yuexiao; Wu, Miaoli; Xiao, Li; Zhu, Yujun; Zhang, Yu; Chen, Meili; Huang, Ren; Luo, Manlin; Cong, Feng; Guo, Pengju 2019 2019-08-23 COMM-USE N PMC6706899 31443656.0 10.1186/s12917-019-2037-z v06dpgoi 0.327836 Davaro_2013, Garcia–Moliner_2013, Lu_P_2016, Crowe_2014, Ramsauer_2007 Zhao_2011, Cho_K_2001, Zhang_2011
673 Yang_2010 Dual detection of Legionella pneumophila and Legionella species by real-time PCR targeting the 23S-5S rRNA gene spacer region Yang, G.; Benson, R.; Pelish, T.; Brown, E.; Winchell, J.M.; Fields, B. 2010 2010-03-31 PMC N PMC7129662 19438641.0 10.1111/j.1469-0691.2009.02766.x vqu4qhu7 0.327094 Dinh_2011, Dalpke_2016, van_Kruijssen_2006, Benson_2008, Shin_1993 Gueudin_2003, Lorusso_2019
674 Vemulapalli_2015 Real-Time Reverse Transcription Polymerase Chain Reaction for Rapid Detection of Transmissible Gastroenteritis Virus Vemulapalli, Ramesh 2015 2015-09-10 PMC N PMC7121909 10.1007/978-1-4939-3414-0_10 dmb42kna 0.326636 Lu_P_2016, Yasui_2016, Tallmadge_2008, van_Riel_2007 Wang_2018, Malik_2013, Stranieri_2017
675 Shirato_2007 Diagnosis of human respiratory syncytial virus infection using reverse transcription loop-mediated isothermal amplification Shirato, Kazuya; Nishimura, Hidekazu; Saijo, Masayuki; Okamoto, Michiko; Noda, Masahiro; Tashiro, Masato; Taguchi, Fumihiro 2007 2007-01-31 PMC N PMC7112771 17052763.0 10.1016/j.jviromet.2006.09.014 54e285re 0.326563 Dinh_2011, Ren_X_2011, Chen_2010, Fan_Q_2012, Yang_2010 Gueudin_2003, Luchsinger_2012, Chu_H_2013, Mu_Y_2014
676 Marulappa_2008 Simple Tests for Rapid Detection of Canine Parvovirus Antigen and Canine Parvovirus-Specific Antibodies Marulappa, Shashidhara Y.; Kapil, Sanjay 2008 2008-11-05 None N PMC2620666 18987166.0 10.1128/cvi.00304-08 c1xx1uvd 0.325847 Lu_P_2016, Yasui_2016, Karlsson_2012, Tallmadge_2008, van_Riel_2007 Lorusso_2019, Weiss_1984
677 Hsieh_2012 Loop‐mediated isothermal amplification for rapid identification of biotypes B and Q of the globally invasive pest Bemisia tabaci, and studying population dynamics Hsieh, Chia‐Hung; Wang, Hurng‐Yi; Chen, Young‐Fa; Ko, Chiun‐Cheng 2012 2012-05-04 PMC N PMC7167967 22566408.0 10.1002/ps.3298 w0lmacnh 0.325173 Gay_N_2014, McCoy_2003, Longdon_2018, Longdon_2017, Han_B_2016
678 Dale_2016 Enhancement of wildlife disease surveillance using multiplex quantitative PCR: development of qPCR assays for major pathogens in UK squirrel populations Dale, Timothy D.; Watts, Phillip C.; Jones, David; Pounder, Kieran; Everest, David J.; Begon, Michael E.; Chantrey, Julian 2016 2016-07-28 COMM-USE N PMC7088385 10.1007/s10344-016-1031-z 9xelf8oh 0.324969 Polverino_2017, Benson_2008, Dinh_2011, Gardner_2004, Goradia_1988 Njiru_2008, Cho_K_2001
679 Chen_2012 Real-Time Quantitative Fluorescent Reverse Transcriptase-PCR for Detection of Severe Acute Respiratory Syndrome-Associated Coronavirus RNA Chen, Weijun; Xu, Zuyuan; Mu, Jingsong; He, Bo; Yang, Ling; Lin, Lin; Meng, Shufang; Mu, Feng; Gan, Haixue; Huang, Shengyong; Wen, Jie; Fang, Jianqiu; Wang, Jian 2012 2012-12-01 PMC N PMC7100218 15887978.0 10.1007/bf03260067 8ym56mpv 0.324630 Dinh_2011, Falcone_1997, Vemulapalli_2009, Chen_2016, Lau_L_2003 Poon_2003, Keyaerts_2006, Wu_Q_2004
680 Lodes_2007 Identification of Upper Respiratory Tract Pathogens Using Electrochemical Detection on an Oligonucleotide Microarray Lodes, Michael J.; Suciu, Dominic; Wilmoth, Jodi L.; Ross, Marty; Munro, Sandra; Dix, Kim; Bernards, Karen; Stöver, Axel G.; Quintana, Miguel; Iihoshi, Naomi; Lyon, Wanda J.; Danley, David L.; McShea, Andrew 2007 2007-09-26 COMM-USE N PMC1976596 17895966.0 10.1371/journal.pone.0000924 yzmt1e0l 0.324066 Rice_1992, Dinh_2011, Myint_1989, Djikeng_2009, Mizutani_2007 Shirato_2007, Cannon_2010
681 Han_J_2014 Nucleic acid-based differential diagnostic assays for feline coronavirus Han, Jae-Ik; Kang, Shien-Young; Yoon, Kyoung-Jin; Na, Ki-Jeong 2014 2014-11-30 PMC N PMC7113662 25088974.0 10.1016/j.jviromet.2014.07.013 710mmtl8 0.322416 Ryu_W_2017, Crowe_2014, Kamau_2019, Armesto_2007, Bickerton_2017 Stranieri_2017, Tanaka_2015, Dye_C_2007
682 Zhao_2020 A simple magnetic nanoparticles-based viral RNA extraction method for efficient detection of SARS-CoV-2 Zhen Zhao; Haodong Cui; Wenxing Song; Xiaoling Ru; Wenhua Zhou; Xuefeng Yu 2020 2020-02-27 BioRxiv Y 10.1101/2020.02.22.961268 nbu6bsb3 0.321993 Chang_2011, Siridechadilok_2013, Naito_2007, Djikeng_2009, Lee_C_2017 Stranieri_2017, Zhu_X_2020, Nemoto_2015, Poon_2003
683 Hourfar_2007 Blood Screening for Influenza Hourfar, Michael Kai; Themann, Anna; Eickmann, Markus; Puthavathana, Pilaipan; Laue, Thomas; Seifried, Erhard; Schmidt, Michael 2007 2007-07-23 PMC N PMC2878216 18214186.0 10.3201/eid1307.060861 oqwevkrb 0.320899 Lu_P_2016, Davaro_2013, Yasui_2016, Walker_2010, Yang_2010 Van_Hoeven_2009, Sails_2009
684 Wise_2015 Genotype-Specific Detection of Ferret Coronavirus by Conventional and Real-Time Reverse Transcription Polymerase Chain Reaction Wise, Annabel G.; Kiupel, Matti; Maes, Roger K. 2015 2015-09-10 PMC N PMC7120203 10.1007/978-1-4939-3414-0_16 wzb32zrm 0.320599 Lu_P_2016, van_Riel_2007, Yasui_2016, Karlsson_2012, Kamau_2019 Ehmann_2018, Stranieri_2017, Barker_2017
685 Shin_2018 Nucleic Acid Extraction and Enrichment Shin, Jeong Hwan 2018 2018-11-10 PMC N PMC7123959 10.1007/978-3-319-33900-9_13 du42ho11 0.319626 Zheng_2020, Polverino_2017, Bocharov_2018, Chang_2011 Dundas_2008, Thakore_2018, Koopmans_1993
686 Lee_H_2012 A Universal Influenza A and B Duplex Real‐time RT‐PCR Assay Lee, Hong Kai; Loh, Tze Ping; Lee, Chun Kiat; Tang, Julian Wei‐Tze; Chiu, Lily; Koay, Evelyn Siew‐Chuan 2012 2012-08-15 PMC N PMC7166972 22930514.0 10.1002/jmv.23375 eke5pwe3 0.319161 Yang_2010, Walker_2010, Dinh_2011, Kang_2010, Bennett_2011
687 Yam_W_2005 Clinical evaluation of real-time PCR assays for rapid diagnosis of SARS coronavirus during outbreak and post-epidemic periods Yam, W.C.; Chan, K.H.; Chow, K.H.; Poon, L.L.M.; Lam, H.Y.; Yuen, K.Y.; Seto, W.H.; Peiris, J.S.M. 2005 2005-05-31 PMC N PMC7108323 15797361.0 10.1016/j.jcv.2004.09.029 qxlac437 0.319057 Lau_L_2003, Jiang_2004, Dinh_2011, Kang_2010, Vemulapalli_2009 Poon_2003, Lau_L_2003, Kossyvakis_2015, Keyaerts_2006
688 Onodera_2007 Selection for 3′-End Triplets for Polymerase Chain Reaction Primers Onodera, Kenji 2007 2007-01-01 PMC N PMC7121268 17951790.0 10.1007/978-1-59745-528-2_3 p61mpc6t 0.318861 Thiel_2002, Lee_W_2008, Wang_2018, Chen_2016 Onodera_2004, Moser_2012, Thiel_2002, Lin_T_2004
689 Saito_2019 Development and evaluation of a new real‐time RT‐PCR assay for detecting the latest H9N2 influenza viruses capable of causing human infection Saito, Shinji; Takayama, Ikuyo; Nakauchi, Mina; Nagata, Shiho; Oba, Kunihiro; Odagiri, Takato; Kageyama, Tsutomu 2019 2019-01-30 NONCOMM N PMC6590187 30599081.0 10.1111/1348-0421.12666 n5i3ecy2 0.318177 Lu_P_2016, Yasui_2016, van_Riel_2007, Crowe_2014, Tallmadge_2008 Fan_J_2014, Choudhary_2013, Bolotin_2009
690 Thompson_2007 Electrospray ionisation-cleavable tandem nucleic acid mass tag–peptide nucleic acid conjugates: synthesis and applications to quantitative genomic analysis using electrospray ionisation-MS/MS Thompson, Andrew; Prescott, Mark; Chelebi, Noorhan; Smith, John; Brown, Tom; Schmidt, Günter 2007 2007-01-26 NONCOMM N PMC1994780 17259215.0 10.1093/nar/gkl1123 gyzbzx53 0.318175 Liu_H_2006, Jiang_2011, Hager_2003, Lin_C_2007 Kaleta_2011, Chen_2005, Ng_E_2013
691 Jiang_2018 A simple and safe antibody neutralization assay based on polio pseudoviruses Jiang, Zheng; Liu, Guixiu; Guo-yang, Liao; Sun, Mingbo; Xu, Kangwei; Ying, Zhifang; Wang, Jianfeng; Li, Xuguang; Li, Changgui 2018 2018-10-16 NONCOMM N PMC6422504 30273512.0 10.1080/21645515.2018.1526553 8jnrc01n 0.317437 Tallmadge_2008, Schwartz_2007, Wrammert_2011, Yasui_2016, Karlsson_2012 Tamin_2009, Di_Martino_2009
692 Dutse_2011 Microfluidics-Based Lab-on-Chip Systems in DNA-Based Biosensing: An Overview Dutse, Sabo Wada; Yusof, Nor Azah 2011 2011-05-27 COMM-USE N PMC3231440 22163925.0 10.3390/s110605754 qi9dtaow 0.317021 May_E_2016, CHUNARA_2012, Gupta_2009, Lu_Q_2006 Wang_2011, Yeung_2006, Lee_K_2012, Wang_2012
693 Chen_2018 Next-generation sequencing library preparation method for identification of RNA viruses on the Ion Torrent Sequencing Platform Chen, Guiqian; Qiu, Yuan; Zhuang, Qingye; Wang, Suchun; Wang, Tong; Chen, Jiming; Wang, Kaicheng 2018 2018-05-09 PMC N PMC7088580 29744712.0 10.1007/s11262-018-1568-x utvf8yh6 0.317021 Deng_2015, Rice_1992, Harel_2019, Xu_L_2019 Yang_2018, Qiu_Y_2017, Mikel_2015
694 Wang_2012 Yeast surface display-based microfluidic immunoassay Wang, Jing; Cheng, Danhui; Chan, Jay Kwok-Lun; Luo, Xiaoteng; Wu, Hongkai; Hsing, I-Ming 2012 2012-05-20 PMC N PMC7127699 10.1016/j.snb.2012.02.048 5lz5cajv 0.315227 Liu_H_2006, May_E_2016, Livingston_2005, Rajagopala_2015 Yeung_2006, Lee_K_2012, Hoy_C_2019, Huang_2017
695 Glushakova_2015 Detecting respiratory viral RNA using expanded genetic alphabets and self-avoiding DNA Glushakova, Lyudmyla G.; Sharma, Nidhi; Hoshika, Shuichi; Bradley, Andrea C.; Bradley, Kevin M.; Yang, Zunyi; Benner, Steven A. 2015 2015-11-15 None N PMC4733849 26299645.0 10.1016/j.ab.2015.08.015 4s9zegcb 0.314997 Dinh_2011, Majerciak_2018, Nitsche_2004, Rice_1992, Chen_2018 Schoenike_1999, Zambenedetti_2017
696 Jones_2006 A long distance RT-PCR able to amplify the Pestivirus genome Jones, Leandro R.; Zandomeni, Rubén O.; Weber, E. Laura 2006 2006-06-30 PMC N PMC7112918 16497393.0 10.1016/j.jviromet.2006.01.005 lx1i00wj 0.314417 Thiel_2002, Majerciak_2018, Endoh_2005, Armesto_2007, Thiel_1997 Lazouskaya_2014
697 Shcherbik_2014 Application of real time RT-PCR for the genetic homogeneity and stability tests of the seed candidates for live attenuated influenza vaccine production Shcherbik, Svetlana; Sergent, Sheila B.; Davis, William G.; Shu, Bo; Barnes, John; Kiseleva, Irina; Larionova, Natalie; Klimov, Alexander; Bousse, Tatiana 2014 2014-01-01 PMC N PMC4607041 24056261.0 10.1016/j.jviromet.2013.09.003 m517te1g 0.314388 Yasui_2016, Tallmadge_2008, Lu_P_2016, Schwartz_2007, Yang_2010 Mok_H_2012, Wang_2015, Jiang_2017, Meng_2012
698 Wang_2008 Resequencing microarray probe design for typing genetically diverse viruses: human rhinoviruses and enteroviruses Wang, Zheng; Malanoski, Anthony P; Lin, Baochuan; Kidd, Carolyn; Long, Nina C; Blaney, Kate M; Thach, Dzung C; Tibbetts, Clark; Stenger, David A 2008 2008-12-01 COMM-USE N PMC2607299 19046445.0 10.1186/1471-2164-9-577 ce3wa889 0.314388 Rice_1992, Dinh_2011, Naito_2007, Gardner_2004, Karlsson_2012 Shirato_2007, Xue_G_2013
699 Mai_T_2018 Development of pooled testing system for porcine epidemic diarrhoea using real-time fluorescent reverse-transcription loop-mediated isothermal amplification assay Mai, Thi Ngan; Nguyen, Van Diep; Yamazaki, Wataru; Okabayashi, Tamaki; Mitoma, Shuya; Notsu, Kosuke; Sakai, Yuta; Yamaguchi, Ryoji; Norimine, Junzo; Sekiguchi, Satoshi 2018 2018-05-29 COMM-USE N PMC5975689 29843733.0 10.1186/s12917-018-1498-9 y2w7khwo 0.314193 Polverino_2017, Dinh_2011, UNKNOWN_2010, Collier_2007, Cacciabue_2019 Nemoto_2015, Cho_K_2001, Njiru_2008, Malik_2013
700 Wang_2018 Development of a real time reverse transcription loop-mediated isothermal amplification method (RT-LAMP) for detection of a novel swine acute diarrhea syndrome coronavirus (SADS-CoV) Wang, Huanan; Cong, Feng; Zeng, Fanwen; Lian, Yuexiao; Liu, Xiangnan; Luo, Manlin; Guo, Pengju; Ma, Jingyun 2018 2018-10-31 PMC N PMC7113678 29936095.0 10.1016/j.jviromet.2018.06.010 e0w069vt 0.313936 Lu_P_2016, Davaro_2013, Crowe_2014, Garcia–Moliner_2013, Yasui_2016 Chen_2009, Zhou_2018, Cho_K_2001, Shirato_2007
701 MINAMI-FUKUDA_2013 Detection of Bovine Group A Rotavirus Using Rapid Antigen Detection Kits, RT-PCR and Next-Generation DNA Sequencing MINAMI-FUKUDA, Fujiko; NAGAI, Makoto; TAKAI, Hikaru; MURAKAMI, Toshiaki; OZAWA, Tadashi; TSUCHIAKA, Shinobu; OKAZAKI, Sachiko; KATAYAMA, Yukie; OBA, Mami; NISHIURA, Naomi; SASSA, Yukiko; OMATSU, Tsutomu; FURUYA, Tetsuya; KOYAMA, Satoshi; SHIRAI, Junsuke; TSUNEMITSU, Hiroshi; FUJII, Yoshiki; KATAYAMA, Kazuhiko; MIZUTANI, Tetsuya 2013 2013-08-02 NONCOMM N PMC3942952 23912876.0 10.1292/jvms.13-0265 vsjy9oaf 0.313055 Dinh_2011, Wang_2018, Pandya_2007, Vemulapalli_2009 Malik_2013, Decaro_2004
702 Kim_H_2012 Evaluation of the SD Bioline Norovirus rapid immunochromatography test using fecal specimens from Korean gastroenteritis patients Kim, Hyun Soo; Hyun, Jeongwon; Kim, Jae-Seok; Song, Wonkeun; Kang, Hee Jung; Lee, Kyu Man 2012 2012-12-31 PMC N PMC7119779 22960089.0 10.1016/j.jviromet.2012.08.014 zij2wbzs 0.312371 Vemulapalli_2009, Wang_2018, Fan_Q_2012, Jiang_2004 Kim_J_2014, An_D_2008, Al-Yousif_2001, Thuy_Tien_2018
703 Dye_C_2008 Evaluation of real-time RT-PCR for the quantification of FCoV shedding in the faeces of domestic cats Dye, Charlotte; Helps, Christopher R.; Siddell, Stuart G. 2008 2008-04-30 None N PMC2582154 18243744.0 10.1016/j.jfms.2007.10.010 kgcy6zi6 0.312371 Falcone_1997, Vemulapalli_2009, Majerciak_2018, Benson_2008 Decaro_2004, Gueudin_2003, Buesa_1996
704 Kalikiri_2020 High-throughput extraction of SARS-CoV-2 RNA from nasopharyngeal swabs using solid-phase reverse immobilization beads Mahesh K R Kalikiri; Mohammad Rubayet Hasan; Faheem Mirza; Thabisile Xaba; Patrick Tang; Stephan Lorenz 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.08.20055731 bx2xspbe 0.312334 Dinh_2011, Benson_2008, Chen_2018, Mizutani_2007, Wang_2018 OKBA_2020, Arumugam_2020, Gueudin_2003
705 Lung_2013 Microarray for Identification of the Chiropteran Host Species of Rabies Virus in Canada Lung, Oliver; Nadin-Davis, Susan; Fisher, Mathew; Erickson, Anthony; Knowles, M. Kimberly; Furukawa-Stoffer, Tara; Ambagala, Aruna 2013 2013-05-31 COMM-USE N PMC5003475 27605186.0 10.3390/microarrays2020153 tquokpxk 0.311915 Chang_2011, Harel_2019, Zheng_2008, Gardner_2004, Cheng_2013 Pickering_2015, Sazmand_2019, Ramírez_2014
706 Takayama_2019 Development of real-time fluorescent reverse transcription loop-mediated isothermal amplification assay with quenching primer for influenza virus and respiratory syncytial virus Takayama, Ikuyo; Nakauchi, Mina; Takahashi, Hitoshi; Oba, Kunihiro; Semba, Shohei; Kaida, Atsushi; Kubo, Hideyuki; Saito, Shinji; Nagata, Shiho; Odagiri, Takato; Kageyama, Tsutomu 2019 2019-05-31 PMC N PMC7113748 30831121.0 10.1016/j.jviromet.2019.02.010 71iijb70 0.310726 Lu_P_2016, Tallmadge_2008, Yasui_2016, Dinh_2011, Yang_2010 Shirato_2007, Gueudin_2003, Sails_2009
707 Takano_2014 Serological Diagnosis of Feline Coronavirus Infection by Immunochromatographic Test Takano, Tomomi; Hohdatsu, Tsutomu 2014 2014-12-18 PMC N PMC7122596 25720468.0 10.1007/978-1-4939-2438-7_3 wfy5kz63 0.310482 Leibowitz_1983, Czerny_1989, Elia_2003, Fleming_1988, _2009 Xue_G_2013
708 Öhrmalm_2010 Hybridization properties of long nucleic acid probes for detection of variable target sequences, and development of a hybridization prediction algorithm Öhrmalm, Christina; Jobs, Magnus; Eriksson, Ronnie; Golbob, Sultan; Elfaitouri, Amal; Benachenhou, Farid; Strømme, Maria; Blomberg, Jonas 2010 2010-09-22 NONCOMM N PMC2995084 20864443.0 10.1093/nar/gkq777 c8yzoen7 0.310420 Karaman_2005, Jiang_2011, Krause_1987, Morikawa_1992, Hatfield_1990 Nowak_1984, Benfield_1991, YU_W_1995, Johnson_1990
709 Schumacher_2012 Miniaturization for Point-of-Care Analysis: Platform Technology for Almost Every Biomedical Assay Schumacher, Soeren; Sartorius, Dorian; Ehrentreich-Förster, Eva; Bier, Frank F. 2012 2012-10-12 NONCOMM N PMC4975254 27683418.0 ozbnfoqv 0.310050 Bocharov_2018, Lu_Q_2006, Curcin_2005, May_E_2016, von_der_Gracht_2010 Olasagasti_2012, Rastogi_2019, Malik_2020, Luppa_2011
710 Lorusso_2010 One-step real-time RT-PCR for pandemic influenza A virus (H1N1) 2009 matrix gene detection in swine samples Lorusso, Alessio; Faaberg, Kay S.; Killian, Mary Lea; Koster, Leo; Vincent, Amy L. 2010 2010-03-31 PMC N PMC7119756 20005904.0 10.1016/j.jviromet.2009.12.002 1zyy536y 0.309670 Lu_P_2016, Walker_2010, Yasui_2016, Yang_2010, Karlsson_2012 Kumar_2010, Fan_J_2014, Van_Hoeven_2009
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