1 |
RNA |
gene |
frameshifting |
DI |
stem |
secondary |
UTR |
binding |
coronavirus |
translation |
nidoviruses |
rdrp |
helicase |
CP |
poly(a |
2 |
viral |
sequence |
frameshift |
leader |
pseudoknot |
structures |
HCV |
packaging |
sars-cov |
IRES |
nidovirus |
polymerase |
helicases |
TMV |
tail |
3 |
viruses |
ORF |
−1 |
subgenomic |
loop |
secondary structure |
replication |
protein |
coronaviruses |
initiation |
EAV |
fidelity |
dsrna |
benthamiana |
SL |
4 |
replication |
protein |
ribosomal |
rnas |
base |
structure |
polyadenylation |
interaction |
torovirus |
internal |
arteriviruses |
polymerases |
duplex |
HEV |
thermometers |
5 |
genomes |
amino |
PRF |
MHV |
pseudoknots |
regions |
bamv |
binds |
acute |
mrnas |
size |
rdrps |
unwinding |
coat |
tails |
6 |
rna viruses |
open |
programmed |
RNA |
tertiary |
secondary structures |
3′ |
core |
respiratory |
cap |
LDV |
catalytic |
nucleic |
mosaic |
PKR |
7 |
review |
reading |
slippery |
synthesis |
unfolding |
prediction |
PRRSV |
PTB |
severe |
mrna |
viruses |
nsp12 |
double-stranded |
γ |
T7 |
8 |
multiple |
TGEV |
translational |
sg |
structure |
SL1 |
EBOV |
xrn1p |
syndrome |
entry |
families |
rna-dependent |
DNA |
movement |
vaccinia |
9 |
studies |
strain |
site |
recombination |
rna pseudoknot |
algorithm |
vitro |
motif |
SARS |
NMD |
arteritis |
enzyme |
nsp13 |
protoplasts |
rnase |
10 |
proteins |
region |
-1 |
transcription |
stability |
dynamic |
infectivity |
3′UTR |
orf1a |
scanning |
nidovirales |
novo |
double-stranded rna |
nicotiana |
method |
11 |
mechanisms |
% |
ribosomal frameshifting |
mrnas |
stem 1 |
accuracy |
luciferase |
GAIT |
sgrnas |
methylation |
family |
de |
substrate |
RNA3 |
sequencing |
12 |
synthesis |
nucleotide |
ribosome |
leader sequence |
pair |
elements |
JEV |
complexes |
replicase |
capping |
large |
de novo |
hydrolysis |
nicotiana benthamiana |
taq |
13 |
genome |
acid |
codon |
defective |
2 |
program |
in vitro |
rna-binding |
coronaviridae |
AUG |
equine arteritis virus |
palm |
ded1p |
tobacco |
(−)‐strand |
14 |
virus |
5 |
downstream |
cells |
triple |
predicted |
WYMV |
RNA |
mers-cov |
translation initiation |
kb |
pol |
cypovirus |
plants |
fcov |
15 |
host |
3 |
efficiency |
(−)-strand |
stems |
methods |
minus-strand rna |
replication |
genome |
start |
SHFV |
RT |
NP |
N. |
liver |
16 |
elements |
frames |
HIV-1 |
template |
hairpin |
rna structure |
utrs |
1a |
acute respiratory syndrome |
ribosome |
arteriviridae |
+ |
activity |
STMV |
length |
17 |
control |
open reading frames |
signals |
recombinants |
melting |
distribution |
PVX |
role |
shrimp |
online |
genome size |
rna-dependent rna polymerase |
NS3 |
p7a |
gp17.1 |
18 |
genetic |
amino acids |
signal |
body |
chemical |
s2 |
genetics |
complex |
sars-cov-2 |
pathway |
arterivirus |
incorporation |
obrv |
α |
trypanosome |
19 |
functional |
product |
recoding |
strand |
probing |
predict |
decreased |
innate |
genus |
version |
genome |
activity |
dsrna viruses |
n. benthamiana |
chromosome |
20 |
functions |
end |
readthrough |
genomic |
interactions |
structural elements |
mutant |
cyclization |
worldwide |
reinitiation |
virus |
PP1 |
atpase |
cymmv |
hela |
21 |
viral rna |
orfs |
frame |
negative-strand |
mechanical |
search |
3′ utr |
n protein |
hepcv |
decay |
equine |
triphosphate |
ntpase |
M1 |
DNA |
22 |
replicase |
encodes |
slippage |
deletion |
stacking |
SHAPE |
plasmid |
membrane |
family coronaviridae |
codon |
expansion |
termination |
POLD1 |
symptoms |
units |
23 |
understanding |
acids |
ribosomes |
mouse hepatitis virus |
force |
3D |
transfected |
packaging signal |
humans |
supplementary |
hemorrhagic |
PNUTS |
activities |
barley |
activation |
24 |
function |
segment |
trna |
leader rna |
proposed |
programs |
PCBP2 |
show |
east |
cap-dependent |
belong |
speed |
helicase activity |
BVDV |
poly(a) tail |
25 |
viral genome |
sequences |
trnas |
coronavirus |
rna pseudoknots |
sequences |
SL2 |
DENV |
profiling |
users |
fever |
rdrp activity |
reoviridae |
run |
poly(u |
26 |
TBSV |
cdna |
mrna |
passage |
triplex |
rna sequences |
infectious |
ER |
MERS |
authorized |
lactate |
JBP3 |
NTP |
silvestrol |
rnase l |
27 |
direct |
frame |
stimulatory |
interfering |
junction |
models |
virus |
core protein |
etov |
online version |
−2/−1 |
biochemical |
catalyze |
M2 |
retroelements |
28 |
provide |
overlapping |
slippery sequence |
helper |
hairpins |
RNA |
minigenome |
association |
covs |
40S |
entities |
II |
polδ |
nm |
nucleosomes |
29 |
recombination |
kda |
event |
intracellular |
conformation |
rna thermometers |
p88 |
localization |
family |
leaky |
roniviridae |
catalysis |
helicase-like |
coat protein |
hpi |
30 |
structural |
nt |
reading |
nucleotides |
bp |
conserved |
genetically |
bound |
envelope |
SUPPLEMENTARY |
tree |
spectrometry |
remodeling |
adenines |
viral transcripts |
31 |
including |
ORF2 |
translocation |
species |
hydrogen |
genomes |
(pa)d2 |
signal |
nested |
RF |
dehydrogenase-elevating |
mass spectrometry |
dptv |
insa |
trna(phe |
32 |
cis-acting |
consensus |
expression |
hepatitis |
folding |
design |
plasmids |
host proteins |
accessory |
cap structure |
lactate dehydrogenase-elevating virus |
zn(2 |
turret |
BSMV |
modifications |
33 |
cellular |
polypeptides |
sequence |
occurred |
loop 2 |
database |
untranslated |
− |
GAV |
inhibition |
order |
polymerization |
nucleic acid |
tobacco mosaic virus |
polyadenylation |
34 |
nature |
proteins |
decoding |
MHV-A59 |
pairs |
sensitivity |
hbov |
yeast |
epidemic |
cellular |
orf1b |
rna-dependent rna polymerases |
2c(atpase |
peptides |
RT-PCR |
35 |
molecular |
genes |
efficient |
bcov |
NMR |
clinical |
firefly |
proteins |
outbreak |
IGR |
include |
GTP |
EV71 |
1.2-kb |
3dpol |
36 |
plant |
nucleotides |
reading frame |
disse |
optical |
statistically |
reverse |
flavivirus |
orfs |
encephalomyocarditis |
evolutionary |
wdr82 |
(−)RNA |
sgrna3a |
transcripts |
37 |
regulate |
open reading frame |
gag-pol |
trss |
h-type |
g-quadruplexes |
5′ |
nucleocapsid |
molecular biology |
mechanisms |
macrophages |
subdomain |
motor |
CGMMV |
dinoflagellates |
38 |
responsible |
genome |
anticodon |
genomic rna |
tertiary interactions |
computer |
cells |
interferon |
PEDV |
strategies |
members |
motifs |
VP5 |
sgrnaβ1 |
c1je |
39 |
recent |
sequenced |
+ |
sequence |
LNA |
spatial |
study |
JV |
YHV |
MZP |
mtase |
residues |
repair |
potexvirus |
* |
40 |
BMV |
virus |
heptanucleotide |
106 |
1 |
chunking |
cdna |
helix a |
torovirinae |
ELECTRONIC |
organization |
pol ii termination |
m-nsp13 |
CV17 |
gluc |
41 |
variety |
genomic |
pseudoknot |
UCUAA |
triplets |
3′-UTR |
regions |
L-A |
riboseq |
encephalomyocarditis virus |
evolution |
mn(2 |
atpase activity |
systemically |
nanopore |
42 |
insights |
nucleotide sequence |
errors |
serial |
SRV-1 |
VIPS |
LR |
EPRS |
disease |
MATERIAL |
genomes |
mg(2 |
hel |
leaves |
perkinsus |
43 |
processing |
closely |
slippery site |
rna species |
formation |
inv |
wheat |
exosome |
group |
caps |
TMEV |
remdesivir |
ns3h |
cell-to-cell |
ends |
44 |
knowledge |
found |
programmed −1 ribosomal frameshifting |
crossover |
model |
element |
mir-122 |
KUN |
IBV |
UAA |
family arteriviridae |
primer-dependent |
family reoviridae |
arcv-1 |
trna |
45 |
plus-strand |
transmissible |
genes |
genome-length |
hairpin structure |
enterica |
NS |
formation |
bioinformatic |
position |
taxonomy |
transcription |
malaria |
RYMV |
canonical |
46 |
structure |
antibodies |
mechanism |
crossovers |
changed |
ncrna |
mutations |
viral |
pandemic |
transport |
LV |
viral rdrps |
lassa |
mitochondrial |
lig |
47 |
contribute |
tcov |
ribosomal frameshift |
infected |
⇌ |
statistically significant |
p27 |
reticulum |
NS6 |
UG |
K22 |
complex |
reoviruses |
probes |
ONT |
48 |
mechanism |
ORF1 |
shifty |
transcripts |
solution |
SL3 |
rescued |
secrete |
domestic |
leaky scanning |
group |
domains |
unwinds |
capsid |
minrna |
49 |
rna elements |
3b |
a-site |
bovine coronavirus |
2′-o-methyl |
microsatellites |
extract |
astroviruses |
livestock |
pgkl1,2 |
ssrna+ |
GDD |
dead-box |
virions |
vaccinia virus |
50 |
plant viruses |
1 |
frameshift site |
sequences |
contributions |
programming |
RCNMV |
sfrna |
cattle |
cells |
reverse-frame |
JGT |
ssdna |
lys |
n(6),2'-o-dimethyladenosine |