1 |
Banerjee_2001 |
Enhanced Accumulation of Coronavirus Defective Interfering RNA from Expressed Negative-Strand Transcripts by Coexpressed Positive-Strand RNA Transcripts |
Banerjee, Sangeeta; Repass, John F.; Makino, Shinji |
2001 |
2001-09-01 |
PMC |
N |
PMC7133719 |
11531407.0 |
10.1006/viro.2001.1047 |
0yp4c4ks |
0.985243 |
Stork_2011, Rice_1992, Mizutani_2000, Chen_2013 |
Bhullar_2014 |
2 |
Mizutani_2000 |
Nascent Synthesis of Leader Sequence-Containing Subgenomic mRNAs in Coronavirus Genome-Length Replicative Intermediate RNA |
Mizutani, Tetsuya; Repass, John F.; Makino, Shinji |
2000 |
2000-09-30 |
PMC |
N |
PMC7130702 |
10998322.0 |
10.1006/viro.2000.0489 |
w8vy5rl8 |
0.943728 |
Banerjee_2001, Stork_2011, Rice_1992, Chen_2013 |
Baric_1985, Bhullar_2014 |
3 |
An_S_1998 |
Characterizations of Coronaviruscis-Acting RNA Elements and the Transcription Step Affecting Its Transcription Efficiency |
An, Sungwhan; Makino, Shinji |
1998 |
1998-03-30 |
PMC |
N |
PMC7133654 |
9527929.0 |
10.1006/viro.1998.9059 |
85zntq7i |
0.903703 |
Banerjee_2001, Rice_1992, Lamb_1991, Stork_2011 |
JEONG_1996 |
4 |
Maeda_1998 |
Importance of coronavirus negative-strand genomic RNA synthesis prior to subgenomic RNA transcription |
Maeda, Akihiko; An, Sungwhan; Makino, Shinji |
1998 |
1998-09-30 |
PMC |
N |
PMC7127783 |
9833884.0 |
10.1016/s0168-1702(98)00090-2 |
d7yxkpf2 |
0.899415 |
Rice_1992, Banerjee_2001, Stork_2011, Mizutani_2000, Payne_2017 |
Mizutani_2000 |
5 |
Leibowitz_1981 |
The virus-specific intracellular RNA species of two murine coronaviruses: MHV-A59 and MHV-JHM |
Leibowitz, Julian L.; Wilhelmsen, Kirk C.; Bond, Clifford W. |
1981 |
1981-10-15 |
PMC |
N |
PMC7131044 |
7281517.0 |
10.1016/0042-6822(81)90250-6 |
999kewdw |
0.882391 |
Rice_1992, Stork_2011, Banerjee_2001, Mizutani_2000, Payne_2017 |
Nowak_1984, Baric_1985 |
6 |
LUYTJES_1996 |
Replication of Synthetic Defective Interfering RNAs Derived from Coronavirus Mouse Hepatitis Virus-A59 |
LUYTJES, WILLEM; GERRITSMA, HELEEN; SPAAN, WILLY J.M. |
1996 |
1996-02-01 |
PMC |
N |
PMC7130680 |
8614984.0 |
10.1006/viro.1996.0044 |
ejgkrxoe |
0.880756 |
Banerjee_2001, Rice_1992, Auewarakul_2005, An_S_1998 |
|
7 |
Makino_1988 |
Defective-interfering particles of murine coronavirus: Mechanism of synthesis of defective viral RNAs |
Makino, Shinji; Shieh, Chien-Kou; Keck, James G.; Lai, Michael M.C. |
1988 |
1988-03-31 |
PMC |
N |
PMC7131348 |
2831651.0 |
10.1016/0042-6822(88)90237-1 |
pbn9n37n |
0.880215 |
Stork_2011, Rice_1992, Banerjee_2001 |
|
8 |
Baric_1985 |
Characterization of leader-related small RNAs in coronavirus-infected cells: Further evidence for leader-primed mechanism of transcription |
Baric, Ralph S.; Stohlman, Stephen A.; Razavi, Mahmood K.; Lai, Michael M.C. |
1985 |
1985-07-31 |
PMC |
N |
PMC7133907 |
2992183.0 |
10.1016/0168-1702(85)90038-3 |
ztmrrii3 |
0.835987 |
Banerjee_2001, Stork_2011, An_S_1998, Krause_1987, Rice_1992 |
Baker_1990 |
9 |
Baker_1990 |
An in vitro system for the leader-primed transcription of coronavirus mRNAs. |
Baker, S C; Lai, M M |
1990 |
1990-12-23 |
PMC |
N |
PMC552193 |
2174358.0 |
|
fma25t1n |
0.830318 |
Stork_2011, Banerjee_2001, Lin_X_2015, Chen_2013, Rice_1992 |
Baric_1985 |
10 |
Makino_1989 |
Evolution of the 5′-end of genomic rna of murine coronaviruses during passages in vitro |
Makino, Shinji; Lai, Michael M.C. |
1989 |
1989-03-31 |
PMC |
N |
PMC7131712 |
2538033.0 |
10.1016/0042-6822(89)90060-3 |
1esr4qcz |
0.819755 |
Rice_1992, Auewarakul_2005, Morikawa_1992, Lamb_1991 |
Makino_1988 |
11 |
Makino_1984 |
Analysis of genomic and intracellular viral RNAs of small plaque mutants of mouse hepatitis virus, JHM strain |
Makino, Shinji; Taguchi, Fumihiro; Hirano, Norio; Fujiwara, Kosaku |
1984 |
1984-11-30 |
PMC |
N |
PMC7119021 |
6093379.0 |
10.1016/0042-6822(84)90335-0 |
ahxwa34k |
0.812754 |
Rice_1992, Banerjee_2001, Auewarakul_2005, Stork_2011 |
|
12 |
Zongyu_1994 |
Detection of negative-stranded subgenomic RNAs but not of free leader in LDV-infected macrophages |
Zongyu, Chen; Faaberg, Kay S.; Plagemann, Peter G.W. |
1994 |
1994-11-30 |
PMC |
N |
PMC7133802 |
7856308.0 |
10.1016/0168-1702(94)90098-1 |
sw95s6xe |
0.800404 |
Banerjee_2001, Stork_2011, Rice_1992, Mizutani_2000, Chen_2013 |
Baric_1985, Mizutani_2000 |
13 |
Pasternak_2001 |
Sequence requirements for RNA strand transfer during nidovirus discontinuous subgenomic RNA synthesis |
Pasternak, Alexander O.; van den Born, Erwin; Spaan, Willy J.M.; Snijder, Eric J. |
2001 |
2001-12-17 |
PMC |
N |
PMC125340 |
11742998.0 |
10.1093/emboj/20.24.7220 |
zjufx4fo |
0.791858 |
Stork_2011, Morikawa_1992, Krause_1987, Banerjee_2001, Lai_M_2005 |
Adams_2003 |
14 |
Hiscox_1995 |
Quantification of individual subgenomic mRNA species during replication of the coronavirus transmissible gastroenteritis virus |
Hiscox, Julian A.; Cavanagh, David; Britton, Paul |
1995 |
1995-05-31 |
PMC |
N |
PMC7134076 |
7653093.0 |
10.1016/0168-1702(94)00108-o |
wi2hhsmh |
0.790053 |
Auewarakul_2005, Banerjee_2001, Krause_1987, An_S_1998 |
DEN_BOON_1995, Tzeng_2006 |
15 |
Zhang_1997 |
Recombinant Genomic RNA of Coronavirus MHV-A59 after Coreplication with a DI RNA Containing the MHV-RI Spike Gene |
Zhang, Linong; Homberger, Felix; Spaan, Willy; Luytjes, Willem |
1997 |
1997-03-31 |
PMC |
N |
PMC7130785 |
9126265.0 |
10.1006/viro.1997.8460 |
s3hval1a |
0.784932 |
Rice_1992, Banerjee_2001, Stork_2011, Brown_1984 |
Nowak_1984 |
16 |
Pattnaik_1995 |
The termini of VSV DI particle RNAs are sufficient to signal RNA encapsidation, replication, and budding to generate infectious particles |
Pattnaik, Asit K.; Ball, L. Andrew; Legrone, Alison; Wertz, Gail W. |
1995 |
1995-01-10 |
PMC |
N |
|
7831839.0 |
10.1016/s0042-6822(95)80005-0 |
rbwag5qi |
0.783285 |
Rice_1992, Banerjee_2001, Stork_2011, Payne_2017 |
Tzeng_2006, Bhullar_2014 |
17 |
Keck_1987 |
Multiple recombination sites at the 5′-end of murine coronavirus RNA |
Keck, James G.; Stohlman, Stephen A.; Side, Lisa H.; Makino, Shinji; Lai, Michael M.C. |
1987 |
1987-02-28 |
PMC |
N |
PMC7130635 |
3027982.0 |
10.1016/0042-6822(87)90413-2 |
qvcgebjg |
0.779993 |
Rice_1992, Auewarakul_2005, Morikawa_1992, Bertholet_1987 |
Tzeng_2006 |
18 |
Pasternak_2004 |
Regulation of Relative Abundance of Arterivirus Subgenomic mRNAs |
Pasternak, Alexander O.; Spaan, Willy J. M.; Snijder, Eric J. |
2004 |
2004-07-14 |
None |
N |
PMC446141 |
15254182.0 |
10.1128/jvi.78.15.8102-8113.2004 |
m76ls89z |
0.770639 |
Banerjee_2001, Stork_2011, Lamb_1991, Rice_1992, Payne_2017 |
|
19 |
Perlman_1986 |
MHV nucleocapsid synthesis in the presence of cycloheximide and accumulation of negative strand MHV RNA |
Perlman, Stanley; Ries, Dana; Bolger, Eric; Lung-Ji, Chang; Stoltzfus, C.Martin |
1986 |
1986-12-31 |
PMC |
N |
PMC7133998 |
3033933.0 |
10.1016/0168-1702(86)90074-2 |
fhvstenq |
0.769822 |
Stork_2011, Banerjee_2001, Masante_2015, Masaki_2015 |
|
20 |
Yeh_P_2014 |
Identification of Cis-Acting Elements on Positive-Strand Subgenomic mRNA Required for the Synthesis of Negative-Strand Counterpart in Bovine Coronavirus |
Yeh, Po-Yuan; Wu, Hung-Yi |
2014 |
2014-07-30 |
COMM-USE |
N |
PMC4147681 |
25080125.0 |
10.3390/v6082938 |
57jwhbcv |
0.736293 |
Morikawa_1992, Krause_1987, Stork_2011, Lamb_1991, Chen_2017 |
Liao_2014 |
21 |
Derdeyn_1995 |
Characterization of defective-interfering RNAs of rubella virusgenerated during serial undiluted passage |
Derdeyn, Cynthia A.; Frey, Teryl K. |
1995 |
1995-01-10 |
PMC |
N |
PMC7130850 |
7831776.0 |
10.1016/s0042-6822(95)80036-0 |
jbp8bxjz |
0.729290 |
Banerjee_2001, An_S_1998, Bertholet_1987, Auewarakul_2005, Rice_1992 |
Tzeng_2006, Adams_2003 |
22 |
Neill_1988 |
Further characterization of the virus-specific RNAs in feline calicivirus infected cells |
Neill, John D.; Mengeling, William L. |
1988 |
1988-08-31 |
PMC |
N |
|
3176687.0 |
10.1016/0168-1702(88)90067-6 |
s8hdoq4a |
0.728770 |
Banerjee_2001, Mizutani_2000, Brown_1984, An_S_1998 |
|
23 |
La_Monica_1992 |
Coronavirus mRNA synthesis: Identification of novel transcription initiation signals which are differentially regulated by different leader sequences |
La Monica, Nicola; Yokomori, Kyoko; Lai, Michael M.C. |
1992 |
1992-05-31 |
PMC |
N |
PMC7131442 |
1566582.0 |
10.1016/0042-6822(92)90774-j |
7e477y1x |
0.718224 |
Krause_1987, Morikawa_1992, Rice_1992, Lamb_1991, An_S_1998 |
Baker_1990 |
24 |
Keck_1988 |
Temporal regulation of bovine coronavirus RNA synthesis |
Keck, James G.; Hogue, Brenda G.; Brian, David A.; Lai, Michael M.C. |
1988 |
1988-03-31 |
PMC |
N |
PMC7134124 |
3376552.0 |
10.1016/0168-1702(88)90093-7 |
fl6h1lrn |
0.718113 |
Banerjee_2001, Stork_2011, Rice_1992, Masaki_2015, Payne_2017 |
Baric_1987 |
25 |
JEONG_1996 |
Coronavirus Transcription Mediated by Sequences Flanking the Transcription Consensus Sequence |
JEONG, YONG SEOK; REPASS, JOHN F.; KIM, YOUNG-NAM; HWANG, SUN-MIN; MAKINO, SHINJI |
1996 |
1996-03-01 |
PMC |
N |
PMC7131137 |
8599216.0 |
10.1006/viro.1996.0118 |
gkg1059v |
0.710000 |
An_S_1998, Rice_1992, Banerjee_2001, Morikawa_1992 |
An_S_1998 |
26 |
Liao_2014 |
The 3′-Terminal 55 Nucleotides of Bovine Coronavirus Defective Interfering RNA Harbor Cis-Acting Elements Required for Both Negative- and Positive-Strand RNA Synthesis |
Liao, Wei-Yu; Ke, Ting-Yung; Wu, Hung-Yi |
2014 |
2014-05-22 |
COMM-USE |
N |
PMC4031142 |
24852421.0 |
10.1371/journal.pone.0098422 |
q4cs2h29 |
0.705876 |
Stork_2011, Banerjee_2001, Rice_1992, Chen_2017, Lin_X_2015 |
|
27 |
KRISHNAN_1996 |
Tandem Placement of a Coronavirus Promoter Results in Enhanced mRNA Synthesis from the Downstream-Most Initiation Site |
KRISHNAN, RAJESH; CHANG, RUEY-YI; BRIAN, DAVID A. |
1996 |
1996-04-15 |
PMC |
N |
PMC7130602 |
8610468.0 |
10.1006/viro.1996.0210 |
xq1dxmb9 |
0.691880 |
Morikawa_1992, Krause_1987, Lamb_1991, Gendron_2010 |
|
28 |
Banner_1990 |
A clustering of rna recombination sites adjacent to a hypervariable region of the peplomer gene of murine coronavirus |
Banner, Lisa R.; Keck, James G.; Lai, Michael M.C. |
1990 |
1990-04-30 |
PMC |
N |
PMC7130556 |
2158184.0 |
10.1016/0042-6822(90)90439-x |
tqeo15ar |
0.679270 |
Morikawa_1992, Auewarakul_2005, Rice_1992 |
Nowak_1984 |
29 |
Baric_1987 |
Analysis of intracellular small RNAs of mouse hepatitis virus: evidence for discontinuous transcription |
Baric, Ralph S.; Shieh, Chien-Kou; Stohlman, Stephen A.; Lai, Michael M.C. |
1987 |
1987-02-28 |
PMC |
N |
PMC7130593 |
3027983.0 |
10.1016/0042-6822(87)90414-4 |
ck7eto16 |
0.672729 |
Stork_2011, Rice_1992, Payne_2017, Banerjee_2001 |
Baric_1985, Nowak_1984 |
30 |
Spaan_1983 |
Coronavirus mRNA synthesis involves fusion of non-contiguous sequences. |
Spaan, W; Delius, H; Skinner, M; Armstrong, J; Rottier, P; Smeekens, S; van der Zeijst, B A; Siddell, S G |
1983 |
1983-01-01 |
PMC |
N |
PMC555368 |
6196191.0 |
|
jzngtd06 |
0.663135 |
Lamb_1991, Rice_1992, Payne_2017, Stork_2011 |
Gopinath_2015, Tzeng_2006 |
31 |
DEN_BOON_1995 |
Equine Arteritis Virus Subgenomic RNA Transcription: UV Inactivation and Translation Inhibition Studies |
DEN BOON, JOHAN A.; SPAAN, WILLY J.M.; SNIJDER, ERIC J. |
1995 |
1995-11-30 |
PMC |
N |
PMC7131190 |
7491761.0 |
10.1006/viro.1995.0009 |
il9vbbgk |
0.649578 |
Rice_1992, Stork_2011, Banerjee_2001 |
|
32 |
Carter_1990 |
Transcription of feline calicivirus RNA |
Carter, M. J. |
1990 |
1990-01-01 |
PMC |
N |
PMC7087285 |
2241572.0 |
10.1007/bf01310744 |
2cfphi88 |
0.647469 |
Rice_1992, Stork_2011, Banerjee_2001, Lin_X_2015 |
Carter_1992, Adams_2003, Tzeng_2006 |
33 |
Lai_M_2005 |
Coronavirus leader‐RNA‐primed transcription: An alternative mechanism to RNA splicing |
Lai, Michael M. C. |
2005 |
2005-02-05 |
PMC |
N |
PMC7161880 |
3551939.0 |
10.1002/bies.950050606 |
7xkj27ph |
0.643421 |
Stork_2011, Rice_1992, Lin_X_2015 |
|
34 |
Banner_1991 |
Random nature of coronavirus RNA recombination in the absence of selection pressure |
Banner, Lisa R.; Mc Lai, Michael |
1991 |
1991-11-30 |
PMC |
N |
PMC7131166 |
1656597.0 |
10.1016/0042-6822(91)90795-d |
ao29zx1u |
0.642610 |
Rice_1992, Auewarakul_2005 |
Banner_1990 |
35 |
Sawicki_1986 |
The effect of loss of regulation of minus-strand RNA synthesis on sindbis virus replication |
Sawicki, Stanley G.; Sawicki, Dorothea L. |
1986 |
1986-06-30 |
PMC |
N |
PMC7131060 |
3705466.0 |
10.1016/0042-6822(86)90054-1 |
u8otoxn4 |
0.634326 |
Stork_2011, Banerjee_2001, Rice_1992 |
Sasvari_2011 |
36 |
van_Vliet_2002 |
Discontinuous and non-discontinuous subgenomic RNA transcription in a nidovirus |
van Vliet, A.L.W.; Smits, S.L.; Rottier, P.J.M.; de Groot, R.J. |
2002 |
2002-12-01 |
PMC |
N |
PMC136939 |
12456663.0 |
10.1093/emboj/cdf635 |
i0zym7iq |
0.627312 |
Stork_2011, Rice_1992, Lamb_1991, Banerjee_2001, Payne_2017 |
Enjuanes_2008, Tzeng_2006 |
37 |
Brian_1997 |
Recombination and Coronavirus Defective Interfering RNAs |
Brian, David A.; Spaan, Willy J.M. |
1997 |
1997-12-31 |
PMC |
N |
PMC7129747 |
|
10.1006/smvy.1997.0109 |
8sein6kc |
0.625264 |
Rice_1992, Stork_2011, Payne_2017, Banerjee_2001 |
Tzeng_2006 |
38 |
Sawicki_2005 |
Coronavirus Transcription: A Perspective |
Sawicki, S. G.; Sawicki, D. L. |
2005 |
2005-01-01 |
PMC |
N |
PMC7121018 |
15609508.0 |
10.1007/3-540-26765-4_2 |
cbsadvbu |
0.624214 |
Stork_2011, Banerjee_2001, Rice_1992, Lin_X_2015 |
Baker_1990, Mizutani_2000 |
39 |
Makino_1988 |
Primary structure and translation of a defective interfering rna of murine coronavirus |
Makino, Shinji; Shieh, Chien-Kou; Soe, Lisa H.; Baker, Susan C.; Lai, Michael M.C. |
1988 |
1988-10-31 |
PMC |
N |
PMC7131284 |
2845661.0 |
10.1016/0042-6822(88)90526-0 |
vtrfqozl |
0.599332 |
Morikawa_1992, Hatfield_1990, Lamb_1991, Krause_1987, Firth_2009 |
Tzeng_2006 |
40 |
Ke_T_2013 |
A Leaderless Genome Identified during Persistent Bovine Coronavirus Infection Is Associated with Attenuation of Gene Expression |
Ke, Ting-Yung; Liao, Wei-Yu; Wu, Hung-Yi |
2013 |
2013-12-12 |
COMM-USE |
N |
PMC3861326 |
24349214.0 |
10.1371/journal.pone.0082176 |
5gn2qy8g |
0.597444 |
Rice_1992, Stork_2011, Banerjee_2001, Lamb_1991, Auewarakul_2005 |
Tzeng_2006 |
41 |
Cheley_1981 |
Intracellular murine hepatitis virus-specific RNAs contain common sequences |
Cheley, Steve; Anderson, Robert; Cupples, Margaret J.; Lee Chan, Edwin C.M.; Morris, Vincent L. |
1981 |
1981-07-30 |
PMC |
N |
PMC7131256 |
6114592.0 |
10.1016/0042-6822(81)90305-6 |
lfx2a3qi |
0.587962 |
Stork_2011, Rice_1992, Banerjee_2001, Mizutani_2000, Chen_2013 |
Nowak_1984 |
42 |
Tzeng_2006 |
C-E1 fusion protein synthesized by rubella virus DI RNAs maintained during serial passage |
Tzeng, Wen-Pin; Frey, Teryl K. |
2006 |
2006-12-20 |
None |
N |
PMC2694048 |
16938325.0 |
10.1016/j.virol.2006.07.041 |
sik7m86l |
0.564439 |
Rice_1992, Banerjee_2001, Stork_2011, Payne_2017 |
Adams_2003 |
43 |
Adams_2003 |
Analysis of intermolecular RNA–RNA recombination by rubella virus |
Adams, Sandra D.; Tzeng, Wen-Pin; Chen, Min-Hsin; Frey, Teryl K. |
2003 |
2003-05-10 |
PMC |
N |
PMC7126107 |
12758173.0 |
10.1016/s0042-6822(03)00064-3 |
5ld0o9gv |
0.553370 |
Morikawa_1992, Rice_1992, Banerjee_2001, Lamb_1991, Auewarakul_2005 |
Tzeng_2006 |
44 |
Parsons_1984 |
Trypanosome mRNAs share a common 5′ spliced leader sequence |
Parsons, Marilyn; Nelson, Richard G.; Watkins, Kenneth P.; Agabian, Nina |
1984 |
1984-08-31 |
PMC |
N |
PMC7133311 |
6088073.0 |
10.1016/0092-8674(84)90552-x |
5r0oc9kz |
0.536299 |
Krause_1987, Lamb_1991, Bertholet_1987 |
Milhausen_1984, Samal_2013, Baric_1985 |
45 |
Kirkegaard_1986 |
The mechanism of RNA recombination in poliovirus |
Kirkegaard, Karla; Baltimore, David |
1986 |
1986-11-07 |
PMC |
N |
PMC7133339 |
3021340.0 |
10.1016/0092-8674(86)90600-8 |
p0nwbgun |
0.531603 |
Rice_1992, Auewarakul_2005, Stork_2011 |
Adams_2003 |
46 |
Cologna_2000 |
Identification of Nucleocapsid Binding Sites within Coronavirus-Defective Genomes |
Cologna, Raymond; Spagnolo, Jeannie F.; Hogue, Brenda G. |
2000 |
2000-11-25 |
PMC |
N |
PMC7131401 |
11080472.0 |
10.1006/viro.2000.0611 |
zo2ff0jk |
0.517997 |
Rice_1992, Stork_2011, Banerjee_2001, Lin_X_2015 |
Bhullar_2014 |
47 |
Yokomori_1991 |
Heterogeneity of gene expression of the hemagglutinin-esterase (HE) protein of murine coronaviruses |
Yokomori, Kyoko; Banner, Lisa R.; Lai, Michael M.C. |
1991 |
1991-08-31 |
PMC |
N |
PMC7130567 |
1649505.0 |
10.1016/0042-6822(91)90994-m |
wbwb90h8 |
0.517629 |
Rice_1992, Auewarakul_2005, Morikawa_1992 |
|
48 |
Nagy_1998 |
Dissecting RNA recombination in vitro: role of RNA sequences and the viral replicase. |
Nagy, P D; Zhang, C; Simon, A E |
1998 |
1998-04-15 |
PMC |
N |
PMC1170582 |
9545250.0 |
10.1093/emboj/17.8.2392 |
sfue9fdb |
0.503273 |
Stork_2011, Lin_X_2015, Morikawa_1992, Chen_2013, Pong_2011 |
Adams_2003, Bhullar_2014 |
49 |
MÉNDEZ_1996 |
Molecular Characterization of Transmissible Gastroenteritis Coronavirus Defective Interfering Genomes: Packaging and Heterogeneity |
MÉNDEZ, ANA; SMERDOU, CRISTIAN; IZETA, ANDER; GEBAUER, FÁTIMA; ENJUANES, LUIS |
1996 |
1996-03-15 |
PMC |
N |
PMC7131039 |
8610441.0 |
10.1006/viro.1996.0144 |
i9q5il41 |
0.502816 |
Banerjee_2001, Rice_1992, Auewarakul_2005, Brown_1984, Payne_2017 |
Tzeng_2006, Derdeyn_1995 |
50 |
Knorr_1991 |
De novo generation of defective interfering RNAs of tomato bushy stunt virus by high multiplicity passage |
Knorr, D.A.; Mullin, R.H.; Hearne, P.Q.; Morris, T.J. |
1991 |
1991-03-31 |
PMC |
N |
PMC7131041 |
1994574.0 |
10.1016/0042-6822(91)90484-s |
xo4mbxei |
0.477237 |
Rice_1992, Banerjee_2001, Auewarakul_2005, Payne_2017, Stork_2011 |
Tzeng_2006, Derdeyn_1995 |
51 |
Gordon_1985 |
Subgenomic RNAs with nucleotide sequences derived from RNAs 1 and 2 of cucumber mosaic virus can act as messenger RNAsin Vitro |
Gordon, Karl H.J.; Symons, Robert H. |
1985 |
1985-04-15 |
PMC |
N |
|
|
10.1016/0042-6822(85)90429-5 |
2w2hfpv3 |
0.476425 |
Banerjee_2001, Stork_2011, Chen_2013 |
|
52 |
Zhang_2000 |
Identification of a Noncanonical Signal for Transcription of a Novel Subgenomic mRNA of Mouse Hepatitis Virus: Implication for the Mechanism of Coronavirus RNA Transcription |
Zhang, Xuming; Liu, Runzhong |
2000 |
2000-12-05 |
PMC |
N |
PMC7130745 |
11112483.0 |
10.1006/viro.2000.0637 |
z5uhrta5 |
0.464049 |
Morikawa_1992, Gendron_2010, Krause_1987, Jendrach_2014, Wurch_1991 |
|
53 |
YU_W_1995 |
A Conserved Motif at the 3′ End of Mouse Hepatitis Virus Genomic RNA Required for Host Protein Binding and Viral RNA Replication |
YU, WEI; LEIBOWITZ, JULIAN L. |
1995 |
1995-12-01 |
PMC |
N |
PMC7130855 |
8525608.0 |
10.1006/viro.1995.9947 |
p9dl7whd |
0.457047 |
Stork_2011, Rice_1992, Banerjee_2001, Pong_2011 |
Bhullar_2014, Nowak_1984 |
54 |
Page_1990 |
Sequence analysis of the leader RNA of two porcine coronaviruses: Transmissible gastroenteritis virus and porcine respiratory coronavirus |
Page, Kevin W.; Britton, Paul; Boursnell, Michael E. G. |
1990 |
1990-01-01 |
PMC |
N |
PMC7088910 |
1962975.0 |
10.1007/bf00570024 |
o81j3d1j |
0.456044 |
Rice_1992, Banerjee_2001, Stork_2011 |
Baric_1985 |
55 |
Schwer_1987 |
Discontinuous transcription or RNA processing of vaccinia virus late messengers results in a 5′ poly(A) leader |
Schwer, Beate; Visca, Paolo; Vos, Jan C.; Stunnenberg, Hendrik G. |
1987 |
1987-07-17 |
PMC |
N |
|
3594569.0 |
10.1016/0092-8674(87)90212-1 |
63160t7f |
0.430053 |
Krause_1987, Morikawa_1992, Bertholet_1987, An_S_1998, Banerjee_2001 |
Nowak_1984 |
56 |
Lai_M_1996 |
Recombination in large RNA viruses: Coronaviruses |
Lai, Michael M.C. |
1996 |
1996-12-31 |
PMC |
N |
|
|
10.1006/smvy.1996.0046 |
2s14knw6 |
0.421350 |
Rice_1992, Stork_2011, Payne_2017, Auewarakul_2005 |
|
57 |
Roux_1991 |
Effects of Defective Interfering Viruses on Virus Replication and Pathogenesis In Vitro and In Vivo |
Roux, Laurent; Simon, Anne E.; Holland, John J. |
1991 |
1991-12-31 |
PMC |
N |
|
1957718.0 |
10.1016/s0065-3527(08)60279-1 |
e4e0jt5s |
0.410751 |
Rice_1992, Auewarakul_2005, Ryu_W_2017, Payne_2017 |
Makino_1988, Tzeng_2006 |
58 |
Lenstra_1988 |
Synthesis of long cDNA from viral RNA template |
Lenstra, J.A.; De Groot, R.J.; Jacobs, L.; Kusters, J.G.; Niesters, H.G.M.; Van Der Zeijst, B.A.M. |
1988 |
1988-06-30 |
PMC |
N |
|
3192156.0 |
10.1016/0735-0651(88)90017-9 |
rd61t7ln |
0.399584 |
Stork_2011, Majerciak_2018, An_S_1998 |
Nowak_1984 |
59 |
Raffo_1991 |
Construction of tobacco mosaic virus subgenomic replicons that are replicated and spread systemically in tobacco plants |
Raffo, Anthony J.; Dawson, William O. |
1991 |
1991-09-30 |
PMC |
N |
|
1871972.0 |
10.1016/0042-6822(91)90844-2 |
7i14nsmg |
0.393502 |
Rice_1992, Banerjee_2001 |
Tzeng_2006, Adams_2003 |
60 |
Krause_1987 |
A trans-spliced leader sequence on actin mRNA in C. elegans |
Krause, Michael; Hirsh, David |
1987 |
1987-06-19 |
PMC |
N |
|
|
10.1016/0092-8674(87)90613-1 |
hpv6916w |
0.385564 |
Lamb_1991, Morikawa_1992, Hatfield_1990 |
Samal_2013, Parsons_1984, Schwer_1987 |
61 |
Marr_2003 |
Mismatch Extension During Strong Stop Strand Transfer and Minimal Homology Requirements for Replicative Template Switching During Moloney Murine Leukemia Virus Replication |
Marr, Sharon Fodor; Telesnitsky, Alice |
2003 |
2003-07-18 |
PMC |
N |
|
12850138.0 |
10.1016/s0022-2836(03)00597-7 |
47okncdw |
0.355955 |
Morikawa_1992, Stork_2011, Masante_2015, Rice_1992 |
|
62 |
Mindich_1995 |
Heterologous recombination in the segmented dsRNA genome of bacteriophage Φ6 |
Mindich, Leonard |
1995 |
1995-02-28 |
PMC |
N |
PMC7129777 |
|
10.1016/s1044-5773(05)80011-3 |
6f3e87yk |
0.349253 |
Rice_1992, Stork_2011, Payne_2017, Auewarakul_2005 |
Tzeng_2006, Adams_2003 |
63 |
King_1985 |
Multiple sites of recombination within the RNA genome of foot-and-mouth disease virus |
King, Andrew M.Q.; McCahon, David; Saunders, Keith; Newman, John W.I.; Slade, William R. |
1985 |
1985-11-30 |
PMC |
N |
|
3000107.0 |
10.1016/0168-1702(85)90437-x |
6y452g44 |
0.344705 |
Rice_1992, Auewarakul_2005 |
|
64 |
Di_H_2018 |
New insights about the regulation of Nidovirus subgenomic mRNA synthesis |
Di, Han; McIntyre, Ayisha A.; Brinton, Margo A. |
2018 |
2018-04-30 |
PMC |
N |
PMC5987246 |
29475599.0 |
10.1016/j.virol.2018.01.026 |
lnp5ye11 |
0.340556 |
Lamb_1991, Rice_1992, Banerjee_2001, Krause_1987, Payne_2017 |
Goldberg_1991 |
65 |
Wu_C_2014 |
Nucleocapsid Phosphorylation and RNA Helicase DDX1 Recruitment Enables Coronavirus Transition from Discontinuous to Continuous Transcription |
Wu, Chia-Hsin; Chen, Pei-Jer; Yeh, Shiou-Hwei |
2014 |
2014-10-08 |
None |
N |
PMC7104987 |
25299332.0 |
10.1016/j.chom.2014.09.009 |
9b64z84d |
0.333265 |
Stork_2011, Pong_2011 |
Sasvari_2011, Bhullar_2014 |
66 |
Lili_1992 |
Lactate dehydrogenase-elevating virus (LDV): subgenomic mRNAs, mRNA leader and comparison of 3'-terminal sequences of two LDV isolates |
Lili, Kuo; Zongyu, Chen; Rowland, Raymond R.R.; Faaberg, Kay S.; Plagemann, Peter G.W. |
1992 |
1992-04-30 |
PMC |
N |
PMC7133880 |
1604932.0 |
10.1016/0168-1702(92)90067-j |
kfmbo6gz |
0.324976 |
Luytjes_1988, Firth_2009, Krause_1987, Jendrach_2014, Rott_1991 |
Godeny_1990, Goldberg_1991 |
67 |
Nagy_1999 |
RNA elements required for RNA recombination function as replication enhancers in vitro and in vivo in a plus‐strand RNA virus |
Nagy, Peter D.; Pogany, Judit; Simon, Anne E. |
1999 |
1999-10-15 |
PMC |
N |
PMC1171632 |
10523308.0 |
10.1093/emboj/18.20.5653 |
o360an6f |
0.323487 |
Stork_2011, Rice_1992, Banerjee_2001, Chen_2013, Lin_X_2015 |
|
68 |
Molenkamp_1997 |
Identification of a Specific Interaction between the Coronavirus Mouse Hepatitis Virus A59 Nucleocapsid Protein and Packaging Signal |
Molenkamp, Richard; Spaan, Willy J.M. |
1997 |
1997-12-08 |
PMC |
N |
PMC7130520 |
9426448.0 |
10.1006/viro.1997.8867 |
14nfqusv |
0.323277 |
Stork_2011, Rice_1992, Pong_2011 |
Nowak_1984 |
69 |
Binns_1985 |
The use of a random priming procedure to generate cDNA libraries of infectious bronchitis virus, a large RNA virus |
Binns, M.M.; Boursnell, M.E.G.; Foulds, I.J.; Brown, T.D.K. |
1985 |
1985-07-31 |
PMC |
N |
PMC7119584 |
2993338.0 |
10.1016/0166-0934(85)90116-8 |
48rw5arp |
0.321299 |
Rice_1992 |
Nowak_1984 |
70 |
Wu_H_2003 |
Common RNA replication signals exist among group 2 coronaviruses: evidence for in vivo recombination between animal and human coronavius molecules |
Wu, Hung-Yi; Guy, James S; Yoo, Dongwan; Vlasak, Reinhard; Urbach, Ena; Brian, David A |
2003 |
2003-10-10 |
PMC |
N |
PMC7126556 |
14592769.0 |
10.1016/s0042-6822(03)00511-7 |
2l4xxu3v |
0.317632 |
Ryu_W_2017, Rice_1992 |
Kazakov_2015 |
71 |
Bertholet_1987 |
Vaccinia virus produces late mRNAs by discontinuous synthesis |
Bertholet, Christine; Van Meir, Erwin; ten Heggeler-Bordier, Béatrice; Wittek, Riccardo |
1987 |
1987-07-17 |
PMC |
N |
PMC7133321 |
3036368.0 |
10.1016/0092-8674(87)90211-x |
so5jooj0 |
0.309856 |
Lamb_1991, Morikawa_1992, Krause_1987, Hatfield_1990 |
Schwer_1987, Tzeng_2006 |
72 |
Zheng_2010 |
Recombinant PRRSV expressing porcine circovirus sequence reveals novel aspect of transcriptional control of porcine arterivirus |
Zheng, Haihong; Sun, Zhi; Zhu, Xing-Quan; Long, Jinxue; Lu, Jiaqi; Lv, Jian; Yuan, Shishan |
2010 |
2010-03-31 |
PMC |
N |
PMC7114387 |
19951727.0 |
10.1016/j.virusres.2009.11.014 |
vvcpfsj2 |
0.305562 |
Rice_1992 |
|
73 |
Samal_2013 |
Leader Sequence |
Samal, S.K. |
2013 |
2013-12-31 |
PMC |
N |
PMC7152451 |
|
10.1016/b978-0-12-374984-0.00850-0 |
dg94h2ko |
0.303937 |
Krause_1987, Morikawa_1992, Lamb_1991, Hatfield_1990 |
Baric_1985 |