Topic 01 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 21 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 You_H_2017 Simultaneous detection of respiratory syncytial virus and human metapneumovirus by one-step multiplex real-time RT-PCR in patients with respiratory symptoms You, Huey-Ling; Chang, Shun-Jen; Yu, Hong-Ren; Li, Chia-Chin; Chen, Chang-Han; Liao, Wei-Ting 2017 2017-03-27 COMM-USE N PMC5368990 28347279.0 10.1186/s12887-017-0843-7 y9jro9gt 0.951220 Dinh_2011, Kang_2010, Song_2014, Chen_2010 Shirato_2007, Gueudin_2003
2 Cui_A_2013 The Development and Application of the Two Real-Time RT-PCR Assays to Detect the Pathogen of HFMD Cui, Aili; Xu, Changping; Tan, Xiaojuan; Zhang, Yan; Zhu, Zhen; Mao, Naiying; Lu, Yiyu; Xu, Wenbo 2013 2013-04-18 COMM-USE N PMC3630163 23637836.0 10.1371/journal.pone.0061451 917uwsgx 0.936347 Dinh_2011, Kang_2010 Choudhary_2013, Rodrigues_2011
3 Wang_2019 Duplex real-time RT-PCR assay for detection and subgroup-specific identification of human respiratory syncytial virus Wang, Lijuan; Piedra, Pedro A.; Avadhanula, Vasanthi; Durigon, Edison L.; Machablishvili, Ann; López, María-Renée; Thornburg, Natalie J.; Peret, Teresa C.T. 2019 2019-09-30 PMC N 31181218.0 10.1016/j.jviromet.2019.113676 mwc7qsj4 0.892509 Dinh_2011, Pulford_2004, Kang_2010
4 Scheltinga_2005 Diagnosis of human metapneumovirus and rhinovirus in patients with respiratory tract infections by an internally controlled multiplex real-time RNA PCR Scheltinga, S.A.; Templeton, K.E.; Beersma, M.F.C.; Claas, E.C.J. 2005 2005-08-31 PMC N 15994117.0 10.1016/j.jcv.2004.08.021 in29sfj7 0.874630 Lau_L_2003, Dinh_2011, Vemulapalli_2009, Jiang_2004, Benson_2008 Gueudin_2003, You_H_2017
5 Zhao_2019 A highly sensitive 1-tube nested real-time RT-PCR assay using LNA-modified primers for detection of respiratory syncytial virus Zhao, Li; Wang, Ji; Li, Gui-xia; Qiu, Fang-zhou; Chen, Chen; Zhao, Meng-chuan; Wang, Le; Duan, Su-xia; Feng, Zhi-shan; Ma, Xue-jun 2019 2019-02-28 PMC N PMC7126397 30266400.0 10.1016/j.diagmicrobio.2018.09.001 6jp9yx47 0.857895 Lau_L_2003, Jiang_2004, Dinh_2011, Benson_2008, Wang_2018 Gueudin_2003, Nemoto_2015, Eboigbodin_2017
6 Rheem_2012 Evaluation of a Multiplex Real-time PCR Assay for the Detection of Respiratory Viruses in Clinical Specimens Rheem, Insoo; Park, Joowon; Kim, Tae-Hyun; Kim, Jong Wan 2012 2012-10-17 NONCOMM N PMC3486933 23130338.0 10.3343/alm.2012.32.6.399 pf5m3gm3 0.848286 Lau_L_2003, Dinh_2011 Gueudin_2003
7 Jansen_2011 Development and evaluation of a four-tube real time multiplex PCR assay covering fourteen respiratory viruses, and comparison to its corresponding single target counterparts Jansen, Rogier R.; Schinkel, Janke; Koekkoek, Sylvie; Pajkrt, Dasja; Beld, Marcel; Jong, Menno D. de; Molenkamp, Richard 2011 2011-07-31 PMC N PMC7108253 21571585.0 10.1016/j.jcv.2011.04.010 5g9mbmov 0.845570 Dinh_2011, Lau_L_2003, Benson_2008, Jiang_2004, Wang_2018 Li_J_2012, Rheem_2012
8 Abd-Eldaim_2009 Development and validation of a TaqMan real-time reverse transcription-PCR for rapid detection of feline calicivirus Abd-Eldaim, Mohamed M.; Wilkes, Rebecca P.; Thomas, Kathy V.; Kennedy, Melissa A. 2009 2009-03-01 PMC N PMC7086925 19253013.0 10.1007/s00705-009-0337-5 j9salo2w 0.828656 Dinh_2011, Chen_2010, Lau_L_2003, Chen_2008, Jiang_2004 Stranieri_2017
9 Jiang_2004 Sensitive and Quantitative Detection of Severe Acute Respiratory Syndrome Coronavirus Infection by Real-Time Nested Polymerase Chain Reaction Jiang, Shih Sheng; Chen, Tsan-Chi; Yang, Jyh-Yuan; Hsiung, Chao A.; Su, Ih-Jen; Liu, Ying-Lan; Chen, Po-Cheng; Juang, Jyh-Lyh 2004 2004-01-15 PMC N PMC7107825 14699465.0 10.1086/380841 bqv03u2e 0.807587 Lau_L_2003, Wang_2018, Chen_2008, Dinh_2011 Gueudin_2003, Lau_L_2003, Nemoto_2015
10 Bellau-Pujol_2005 Development of three multiplex RT-PCR assays for the detection of 12 respiratory RNA viruses Bellau-Pujol, S.; Vabret, A.; Legrand, L.; Dina, J.; Gouarin, S.; Petitjean-Lecherbonnier, J.; Pozzetto, B.; Ginevra, C.; Freymuth, F. 2005 2005-06-30 PMC N PMC7112904 15847919.0 10.1016/j.jviromet.2005.01.020 uzfsv2df 0.805543 Gueudin_2003, Shirato_2007
11 Coiras_2004 Simultaneous detection of fourteen respiratory viruses in clinical specimens by two multiplex reverse transcription nested‐PCR assays Coiras, M.T.; Aguilar, J.C.; García, M.L.; Casas, I.; Pérez‐Breña, P. 2004 2004-01-09 PMC N PMC7166637 14748074.0 10.1002/jmv.20008 oa36019p 0.765860
12 Choudhary_2013 Development of real-time RT-PCR for detection of human metapneumovirus and genetic analysis of circulating strains (2009-2011) in Pune, India Choudhary, Manohar Lal; Anand, Siddharth P.; Sonawane, Nupoor S.; Chadha, Mandeep S. 2013 2013-08-09 PMC N PMC7087245 23929232.0 10.1007/s00705-013-1812-6 4rbrzv5o 0.762255 Dinh_2011, Falcone_1997, Vemulapalli_2009 Gueudin_2003
13 Song_2014 Identification of human metapneumovirus genotypes A and B from clinical specimens by reverse transcription loop-mediated isothermal amplification Song, Qinwei; Zhu, Runan; Sun, Yu; Zhao, Linqing; Wang, Fang; Deng, Jie; Qian, Yuan 2014 2014-02-28 PMC N 10.1016/j.jviromet.2013.10.037 nilhztjf 0.743113 Dinh_2011, Chen_2010, Chen_2008, Ren_X_2011
14 Shin_2011 Evaluation of the Seeplex® Meningitis ACE Detection Kit for the Detection of 12 Common Bacterial and Viral Pathogens of Acute Meningitis Shin, So Youn; Kwon, Kye Chul; Park, Jong Woo; Kim, Ji Myung; Shin, So Young; Koo, Sun Hoe 2011 2011-12-20 NONCOMM N PMC3255489 22259778.0 10.3343/alm.2012.32.1.44 5gglmx9d 0.741848 Benson_2008, Lau_L_2003, Dinh_2011, Vemulapalli_2009
15 Niu_P_2016 Development of a highly sensitive real-time nested RT-PCR assay in a single closed tube for detection of enterovirus 71 in hand, foot, and mouth disease Niu, Peihua; Qi, Shunxiang; Yu, Benzhang; Zhang, Chen; Wang, Ji; Li, Qi; Ma, Xuejun 2016 2016-07-30 PMC N PMC7086773 27475103.0 10.1007/s00705-016-2985-6 u31f5e05 0.740518 Lau_L_2003, Jiang_2004, Dinh_2011, Vemulapalli_2009, Wang_2018 Zhao_2019, Gueudin_2003
16 López-Huertas_2005 Two RT-PCR based assays to detect human metapneumovirus in nasopharyngeal aspirates López-Huertas, María Rosa; Casas, Inmaculada; Acosta-Herrera, Belsy; García, María Luz; Coiras, María Teresa; Pérez-Breña, Pilar 2005 2005-10-31 PMC N PMC7112860 15961167.0 10.1016/j.jviromet.2005.05.004 7369h587 0.732372 Dinh_2011, Falcone_1997, Vemulapalli_2009 Gueudin_2003
17 Takayama_2019 Development of real-time fluorescent reverse transcription loop-mediated isothermal amplification assay with quenching primer for influenza virus and respiratory syncytial virus Takayama, Ikuyo; Nakauchi, Mina; Takahashi, Hitoshi; Oba, Kunihiro; Semba, Shohei; Kaida, Atsushi; Kubo, Hideyuki; Saito, Shinji; Nagata, Shiho; Odagiri, Takato; Kageyama, Tsutomu 2019 2019-05-31 PMC N PMC7113748 30831121.0 10.1016/j.jviromet.2019.02.010 71iijb70 0.731762 Dinh_2011 Shirato_2007, Gueudin_2003
18 Carossino_2019 Development and evaluation of a one-step multiplex real-time TaqMan(®) RT-qPCR assay for the detection and genotyping of equine G3 and G14 rotaviruses in fecal samples Carossino, Mariano; Barrandeguy, Maria E.; Erol, Erdal; Li, Yanqiu; Balasuriya, Udeni B. R. 2019 2019-04-25 COMM-USE N PMC6482509 31023319.0 10.1186/s12985-019-1149-1 iqzurjr1 0.727160 Dinh_2011, Wang_2018, Vemulapalli_2009, Benson_2008, Lau_L_2003 Soltan_2016
19 Liu_P_2018 A novel multiplex PCR for virus detection by melting curve analysis Liu, Pengcheng; Lu, Lijuan; Xu, Menghua; Zhong, Huaqing; Jia, Ran; Su, Liyun; Cao, Lingfeng; Dong, Zuoquan; Dong, Niuniu; Zhou, Linfu; Xu, Jin 2018 2018-12-31 PMC N PMC7113878 30267725.0 10.1016/j.jviromet.2018.09.010 a8yfi2wn 0.713609 Dinh_2011, Benson_2008, Vemulapalli_2009, Lau_L_2003, Wang_2018 Li_J_2012, Gueudin_2003
20 Arvia_2015 Detection of 12 respiratory viruses by duplex real time PCR assays in respiratory samples Arvia, Rosaria; Corcioli, Fabiana; Ciccone, Nunziata; Della Malva, Nunzia; Azzi, Alberta 2015 2015-12-31 PMC N PMC7127684 26334289.0 10.1016/j.mcp.2015.08.006 fsqa3gzj 0.707957 Shirato_2007, Gueudin_2003
21 Howard_2017 A novel real-time RT-PCR assay for influenza C tested in Peruvian children Howard, Leigh M.; Johnson, Monika; Gil, Ana I.; Pekosz, Andrew; Griffin, Marie R.; Edwards, Kathryn M.; Lanata, Claudio F.; Grijalva, Carlos G.; Williams, John V. 2017 2017-11-30 PMC N 28917132.0 10.1016/j.jcv.2017.08.014 mqklc60a 0.706291 Dinh_2011, Vemulapalli_2009, Chen_2016, Falcone_1997
22 Zhao_2017 Clinical evaluation of a new single-tube multiplex reverse transcription PCR assay for simultaneous detection of 11 respiratory viruses, Mycoplasma pneumoniae and Chlamydia in hospitalized children with acute respiratory infections Zhao, Meng-chuan; Li, Gui-xia; Zhang, Dan; Zhou, Hang-yu; Wang, Hao; Yang, Shuo; Wang, Le; Feng, Zhi-shan; Ma, Xue-jun 2017 2017-06-30 PMC N PMC7132751 28365060.0 10.1016/j.diagmicrobio.2017.03.010 oj5bzs6m 0.704817 Lau_L_2003, Benson_2008, Jiang_2004, Dinh_2011, Vemulapalli_2009 Gueudin_2003
23 Li_J_2013 A Two-Tube Multiplex Reverse Transcription PCR Assay for Simultaneous Detection of Sixteen Human Respiratory Virus Types/Subtypes Li, Jin; Qi, Shunxiang; Zhang, Chen; Hu, Xiumei; Shen, Hongwei; Yang, Mengjie; Wang, Ji; Wang, Miao; Xu, Wenbo; Ma, Xuejun 2013 2013-08-05 COMM-USE N PMC3747601 23984344.0 10.1155/2013/327620 p119i282 0.691823 Benson_2008, Lau_L_2003, Wang_2018, Vemulapalli_2009, Dinh_2011 Li_J_2012, Malik_2013, Nemoto_2015
24 Thurman_2011 Detection of Mycoplasma pneumoniae, Chlamydia pneumoniae, and Legionella spp. in clinical specimens using a single-tube multiplex real-time PCR assay Thurman, Kathleen A.; Warner, Agnes K.; Cowart, Kelley C.; Benitez, Alvaro J.; Winchell, Jonas M. 2011 2011-05-31 PMC N PMC7126442 21397428.0 10.1016/j.diagmicrobio.2010.11.014 zogtpm7a 0.687855 Benson_2008, Lau_L_2003, Wang_2018, Dinh_2011, Jiang_2004 Gueudin_2003, Njiru_2008
25 Shirato_2007 Diagnosis of human respiratory syncytial virus infection using reverse transcription loop-mediated isothermal amplification Shirato, Kazuya; Nishimura, Hidekazu; Saijo, Masayuki; Okamoto, Michiko; Noda, Masahiro; Tashiro, Masato; Taguchi, Fumihiro 2007 2007-01-31 PMC N PMC7112771 17052763.0 10.1016/j.jviromet.2006.09.014 54e285re 0.686991 Dinh_2011, Ren_X_2011, Chen_2010, Fan_Q_2012 Gueudin_2003, Mu_Y_2014
26 Gueudin_2003 Quantitation of respiratory syncytial virus RNA in nasal aspirates of children by real-time RT-PCR assay Gueudin, M; Vabret, A; Petitjean, J; Gouarin, S; Brouard, J; Freymuth, F 2003 2003-04-30 PMC N PMC7119593 12668266.0 10.1016/s0166-0934(03)00042-9 3p6q92x4 0.684369 Lau_L_2003, Vemulapalli_2009, Jiang_2004, Kang_2010 Shirato_2007, Mu_Y_2014
27 Emery_2004 Real-Time Reverse Transcription–Polymerase Chain Reaction Assay for SARS-associated Coronavirus Emery, Shannon L.; Erdman, Dean D.; Bowen, Michael D.; Newton, Bruce R.; Winchell, Jonas M.; Meyer, Richard F.; Tong, Suxiang; Cook, Byron T.; Holloway, Brian P.; McCaustland, Karen A.; Rota, Paul A.; Bankamp, Bettina; Lowe, Luis E.; Ksiazek, Tom G.; Bellini, William J.; Anderson, Larry J. 2004 2004-02-23 PMC N PMC3322901 15030703.0 10.3201/eid1002.030759 51byypaq 0.683071 Lau_L_2003, Nitsche_2004, Dinh_2011, Jiang_2004 Nemoto_2015, Lau_L_2003, Keyaerts_2006
28 Vemulapalli_2009 A real-time TaqMan® RT-PCR assay with an internal amplification control for rapid detection of transmissible gastroenteritis virus in swine fecal samples Vemulapalli, Ramesh; Gulani, Jatinder; Santrich, Cecilia 2009 2009-12-31 PMC N PMC7112873 19729039.0 10.1016/j.jviromet.2009.08.016 azqbbsfr 0.675448 Lau_L_2003, Falcone_1997, Borja_1992, Dinh_2011 Decaro_2004, Wang_2018, Nemoto_2015
29 Kang_2010 A duplex real-time RT-PCR assay for detecting H5N1 avian influenza virus and pandemic H1N1 influenza virus Kang, Xiao-ping; Jiang, Tao; Li, Yong-qiang; Lin, Fang; Liu, Hong; Chang, Guo-hui; Zhu, Qing-yu; Qin, E-de; Qin, Cheng-feng; Yang, Yin-hui 2010 2010-06-02 COMM-USE N PMC2892456 20515509.0 10.1186/1743-422x-7-113 lakdi3x8 0.675106 Dinh_2011 Kumar_2010, Gueudin_2003
30 Chen_2012 Real-Time Quantitative Fluorescent Reverse Transcriptase-PCR for Detection of Severe Acute Respiratory Syndrome-Associated Coronavirus RNA Chen, Weijun; Xu, Zuyuan; Mu, Jingsong; He, Bo; Yang, Ling; Lin, Lin; Meng, Shufang; Mu, Feng; Gan, Haixue; Huang, Shengyong; Wen, Jie; Fang, Jianqiu; Wang, Jian 2012 2012-12-01 PMC N PMC7100218 15887978.0 10.1007/bf03260067 8ym56mpv 0.674734 Dinh_2011, Falcone_1997, Vemulapalli_2009, Chen_2016, Lau_L_2003 Poon_2003, Keyaerts_2006, Wu_Q_2004
31 Dabisch-Ruthe_2012 Comparison of three multiplex PCR assays for the detection of respiratory viral infections: evaluation of xTAG respiratory virus panel fast assay, RespiFinder 19 assay and RespiFinder SMART 22 assay Dabisch-Ruthe, Mareike; Vollmer, Tanja; Adams, Ortwin; Knabbe, Cornelius; Dreier, Jens 2012 2012-07-24 COMM-USE N PMC3519643 22828244.0 10.1186/1471-2334-12-163 zntwwqod 0.674517 Vemulapalli_2009, Dinh_2011, Falcone_1997, Kang_2010, Benson_2008 Gueudin_2003, Rheem_2012
32 Li_J_2012 The development of a GeXP-based multiplex reverse transcription-PCR assay for simultaneous detection of sixteen human respiratory virus types/subtypes Li, Jin; Mao, Nai-Ying; Zhang, Chen; Yang, Meng-Jie; Wang, Miao; Xu, Wen-Bo; Ma, Xue-Jun 2012 2012-08-14 COMM-USE N PMC3462154 22891685.0 10.1186/1471-2334-12-189 9apyiy7n 0.671286 Lau_L_2003, Benson_2008, Wang_2018, Vemulapalli_2009, Dinh_2011 Nemoto_2015
33 Do_L_2012 A sensitive real-time PCR for detection and subgrouping of human respiratory syncytial virus Do, Lien Anh Ha; van Doorn, H. Rogier; Bryant, Juliet E.; Nghiem, My Ngoc; Nguyen Van, Vinh Chau; Vo, Cong Khanh; Nguyen, Minh Dung; Tran, Tinh Hien; Farrar, Jeremy; de Jong, Menno D. 2012 2012-01-23 PMC N PMC3405522 22119628.0 10.1016/j.jviromet.2011.11.012 3dq99xz9 0.670774 Dinh_2011, Kang_2010, Chen_2010, Song_2014 Shirato_2007, Gueudin_2003, Thuy_Tien_2018
34 Feng_2018 A multiplex one-tube nested real time RT-PCR assay for simultaneous detection of respiratory syncytial virus, human rhinovirus and human metapneumovirus Feng, Zhi-shan; Zhao, Li; Wang, Ji; Qiu, Fang-zhou; Zhao, Meng-chuan; Wang, Le; Duan, Su-xia; Zhang, Rui-qing; Chen, Chen; Qi, Ju-Ju; Fan, Tao; Li, Gui-xia; Ma, Xue-jun 2018 2018-10-30 COMM-USE N PMC6208169 30376870.0 10.1186/s12985-018-1061-0 9hmzu7t6 0.667672 Bellau-Pujol_2005, Kang_2010, Song_2014 Gueudin_2003, You_H_2017, Shirato_2007, Zhao_2019
35 Choi_2008 Development of real-time PCR assays for detection and quantification of human bocavirus Choi, Jang-Hoon; Chung, Yoon-Seok; Kim, Ki-Soon; Lee, Wan-Ji; Chung, Il Yup; Oh, Hee-Bok; Kang, Chun 2008 2008-07-31 PMC N PMC7108235 18378492.0 10.1016/j.jcv.2008.02.010 6fpnmnwc 0.665713 Dinh_2011, Kang_2010, Escutenaire_2006 Gueudin_2003
36 Yu_X_2014 Nested-RT-PCR and Multiplex RT-PCR for Diagnosis of Rhinovirus Infection in Clinical Samples Yu, Xuelian; Ghildyal, Reena 2014 2014-09-09 PMC N PMC7120866 25261303.0 10.1007/978-1-4939-1571-2_2 ujf2vql5 0.665411 Dinh_2011, Jiang_2004, Wang_2018, Lau_L_2003 Gueudin_2003, Shirato_2007
37 Pabbaraju_2015 Detection of enteroviruses and parechoviruses by a multiplex real-time RT-PCR assay Pabbaraju, Kanti; Wong, Sallene; Wong, Anita A.; Tellier, Raymond 2015 2015-04-30 PMC N 25681753.0 10.1016/j.mcp.2015.02.001 l15qa9tr 0.665126 Dinh_2011
38 Pyrc_2011 Development of loop-mediated isothermal amplification assay for detection of human coronavirus-NL63 Pyrc, Krzysztof; Milewska, Aleksandra; Potempa, Jan 2011 2011-07-31 PMC N PMC7112811 21545810.0 10.1016/j.jviromet.2011.04.024 p4w2jh00 0.656368 Dinh_2011, Benson_2008, Wang_2018, Emery_2004 Stranieri_2017, Nemoto_2015, Malik_2013
39 Qi_J_2019 Development of a duplex reverse transcription recombinase-aided amplification assay for respiratory syncytial virus incorporating an internal control Qi, Juju; Li, Xinna; Zhang, Yi; Shen, Xinxin; Song, Guowei; Pan, Jing; Fan, Tao; Wang, Ruihuan; Li, Lixin; Ma, Xuejun 2019 2019-05-03 PMC N PMC7086889 31053978.0 10.1007/s00705-019-04230-z 9ouhxg9o 0.655860 Dinh_2011, Benson_2008, Vemulapalli_2009 Shirato_2007, Mu_Y_2014, Gueudin_2003
40 Ma_L_2018 Development and evaluation of a broadly reactive reverse transcription recombinase polymerase amplification assay for rapid detection of murine norovirus Ma, Lei; Zeng, Fanwen; Cong, Feng; Huang, Bihong; Zhu, Yujun; Wu, Miaoli; Xu, Fengjiao; Yuan, Wen; Huang, Ren; Guo, Pengju 2018 2018-12-14 COMM-USE N PMC6295035 30547776.0 10.1186/s12917-018-1736-1 y52o45zk 0.651744 Vemulapalli_2009, Dinh_2011, Benson_2008, Falcone_1997, Chen_2010 Zhang_2014, Moore_2017, Nemoto_2015
41 Zhang_2018 Clinical evaluation of a panel of multiplex quantitative real-time reverse transcription polymerase chain reaction assays for the detection of 16 respiratory viruses associated with community-acquired pneumonia Zhang, Dan; Mao, Haiyan; Lou, Xiuyu; Pan, Junhang; Yan, Hao; Tang, Hongfeng; Shu, Yan; Zhao, Yun; Cheng, Xiaoli; Tao, Hong; Zhang, Yanjun; Ma, Xuejun 2018 2018-06-30 PMC N PMC7087343 29961119.0 10.1007/s00705-018-3921-8 shwxhak9 0.650704 Lau_L_2003, Jiang_2004, Dinh_2011, Wang_2018 Gueudin_2003, Zhao_2019
42 Rodrigues_2011 Development of a one step real time RT-PCR assay to detect and quantify Dugbe virus Rodrigues, R.; Telles, J.-N.; Essere, K.; Ducournau, C.; Roqueplo, C.; Levieuge, A.; Davoust, B.; Parola, P.; Paranhos-Baccalà, G.; Peyrefitte, C.N. 2011 2011-09-30 PMC N PMC7112838 21703306.0 10.1016/j.jviromet.2011.06.003 03hvi4el 0.650005 Dinh_2011, Vemulapalli_2009, Falcone_1997, Borja_1992 Nemoto_2015, Li_H_2019
43 Wang_2012 Visual detection of the human metapneumovirus using reverse transcription loop-mediated isothermal amplification with hydroxynaphthol blue dye Wang, Xiang; Zhang, Qian; Zhang, Fang; Ma, Fenlian; Zheng, Wenzhi; Zhao, Zhihui; Bai, Yinglong; Zheng, Lishu 2012 2012-07-27 COMM-USE N PMC3487928 22838725.0 10.1186/1743-422x-9-138 k11asjaw 0.644609 Dinh_2011, Song_2014, Kang_2010, Ren_X_2011, Chen_2008 Shirato_2007, Mu_Y_2014, Stranieri_2017, Nemoto_2015
44 Wang_2016 A GeXP-Based Assay for Simultaneous Detection of Multiple Viruses in Hospitalized Children with Community Acquired Pneumonia Wang, Le; Zhao, Mengchuan; Shi, Zhongren; Feng, Zhishan; Guo, Weiwei; Yang, Shuo; Liu, Lanping; Li, Guixia 2016 2016-09-14 COMM-USE N PMC5023126 27627439.0 10.1371/journal.pone.0162411 nz6eqcdb 0.642418 Dinh_2011, Vemulapalli_2009
45 Cordey_2009 Simultaneous detection of parainfluenza viruses 1 and 3 by real-time reverse transcription-polymerase chain reaction Cordey, Samuel; Thomas, Yves; Cherpillod, Pascal; van Belle, Sandra; Tapparel, Caroline; Kaiser, Laurent 2009 2009-03-31 PMC N 19063922.0 10.1016/j.jviromet.2008.11.006 3avh7rf1 0.641490 Dinh_2011, Nitsche_2004, Vemulapalli_2009, Lau_L_2003
46 Yan_Y_2017 A multiplex liquid-chip assay based on Luminex xMAP technology for simultaneous detection of six common respiratory viruses Yan, Yong; Luo, Jian-Yong; Chen, Yin; Wang, Heng-Hui; Zhu, Guo-Ying; He, Pei-Yan; Guo, Jin-Lei; Lei, Yong-Liang; Chen, Zhong-Wen 2017 2017-06-17 COMM-USE N PMC5722533 29228581.0 10.18632/oncotarget.18533 jgu8kc5k 0.640855 Dinh_2011, Escutenaire_2006 Gueudin_2003, Mu_Y_2014
47 Eboigbodin_2017 Rapid and sensitive real-time assay for the detection of respiratory syncytial virus using RT-SIBA® Eboigbodin, Kevin E.; Moilanen, Kirsi; Elf, Sonja; Hoser, Mark 2017 2017-02-10 COMM-USE N PMC5301360 28183291.0 10.1186/s12879-017-2227-x aj9wppts 0.640320 Dinh_2011, Chen_2008, Kang_2010, Chen_2010 Shirato_2007, Gueudin_2003, Mu_Y_2014
48 Sultani_2015 Multiplex SYBR Green Real-Time PCR Assay for Detection of Respiratory Viruses Sultani, Mozhdeh; Mokhtari Azad, Talat; Eshragian, Mohammadreza; Shadab, Azadeh; Naseri, Maryam; Eilami, Owrang; Yavarian, Jila 2015 2015-08-01 NONCOMM N PMC4601230 26468358.0 10.5812/jjm.19041v2 1dvj60yk 0.640273 Escutenaire_2006 Gueudin_2003, Shirato_2007
49 Nakauchi_2019 Development of real‐time fluorescent reverse transcription loop‐mediated isothermal amplification assays for rhinovirus detection Nakauchi, Mina; Takayama, Ikuyo; Takahashi, Hitoshi; Semba, Shohei; Saito, Shinji; Kubo, Hideyuki; Kaida, Atsushi; Oba, Kunihiro; Nagata, Shiho; Odagiri, Takato; Kageyama, Tsutomu 2019 2019-02-22 PMC N PMC7166982 30735248.0 10.1002/jmv.25427 yahr10u5 0.638077 Dinh_2011, Benson_2008, Vemulapalli_2009
50 Kim_H_2012 Evaluation of the SD Bioline Norovirus rapid immunochromatography test using fecal specimens from Korean gastroenteritis patients Kim, Hyun Soo; Hyun, Jeongwon; Kim, Jae-Seok; Song, Wonkeun; Kang, Hee Jung; Lee, Kyu Man 2012 2012-12-31 PMC N PMC7119779 22960089.0 10.1016/j.jviromet.2012.08.014 zij2wbzs 0.637199 Vemulapalli_2009, Wang_2018, Fan_Q_2012, Jiang_2004 An_D_2008, Thuy_Tien_2018
51 Chi_X_2007 Semiquantitative one-step RT-PCR for simultaneous identification of human influenza and respiratory syncytial viruses Chi, X. Sherry; Li, Fenglan; Tam, John S.; Rappaport, Ruth; Cheng, Sheau-Mei 2007 2007-01-31 PMC N PMC7112931 17030067.0 10.1016/j.jviromet.2006.08.015 hj1k1jtu 0.637052 Lau_L_2003, Jiang_2004, Wang_2018, Chen_2008 Gueudin_2003, Shirato_2007, Mu_Y_2014
52 Lau_L_2003 A real-time PCR for SARS-coronavirus incorporating target gene pre-amplification Lau, Lok Ting; Fung, Yin-Wan Wendy; Wong, Freda Pui-Fan; Lin, Selma Sau-Wah; Wang, Chen Ran; Li, Hui Li; Dillon, Natalie; Collins, Richard A; Tam, John Siu-Lun; Chan, Paul K.S; Wang, Chen G; Yu, Albert Cheung-Hoi 2003 2003-12-26 PMC N PMC7111096 14652014.0 10.1016/j.bbrc.2003.11.064 v2o25ey9 0.635792 Jiang_2004, Wang_2018, Benson_2008 Nemoto_2015, Poon_2003, Decaro_2004
53 Poon_2003 Early diagnosis of SARS Coronavirus infection by real time RT-PCR Poon, Leo L.M.; Chan, Kwok Hung; Wong, On Kei; Yam, Wing Cheong; Yuen, Kwok Yung; Guan, Yi; Lo, Y.M.Dennis; Peiris, Joseph S.M. 2003 2003-12-31 PMC Y PMC7129783 14522060.0 10.1016/j.jcv.2003.08.004 86el3qwn 0.635532 Lau_L_2003, Jiang_2004, Wang_2018, Vemulapalli_2009, Borja_1992 Keyaerts_2006, Nemoto_2015, Lau_L_2003
54 Qiu_F_2018 A triplex quantitative real-time PCR assay for differential detection of human adenovirus serotypes 2, 3 and 7 Qiu, Fang-zhou; Shen, Xin-xin; Zhao, Meng-chuan; Zhao, Li; Duan, Su-xia; Chen, Chen; Qi, Ju-Ju; Li, Gui-xia; Wang, Le; Feng, Zhi-shan; Ma, Xue-jun 2018 2018-05-02 COMM-USE N PMC5930744 29716642.0 10.1186/s12985-018-0983-x 8ayfuty8 0.631584 Dinh_2011, Vemulapalli_2009, Kang_2010, Song_2014 Gueudin_2003
55 Faccini_2017 Development and evaluation of a new Real-Time RT-PCR assay for detection of proposed influenza D virus Faccini, Silvia; De Mattia, Aurora; Chiapponi, Chiara; Barbieri, Ilaria; Boniotti, Maria Beatrice; Rosignoli, Carlo; Franzini, Giuliana; Moreno, Ana; Foni, Emanuela; Nigrelli, Arrigo Daniele 2017 2017-05-31 PMC N PMC7113724 28153610.0 10.1016/j.jviromet.2017.01.019 n37yp6if 0.630195 Dinh_2011, Benson_2008 Choudhary_2013
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57 Wang_2018 Rapid detection of transmissible gastroenteritis virus in swine small intestine samples using real-time reverse transcription recombinase polymerase amplification Wang, Jinfeng; Wang, Jianchang; Zhang, Ruoxi; Liu, Libing; Shi, Ruihan; Han, Qingan; Yuan, Wanzhe 2018 2018-06-30 PMC N PMC7113865 29550352.0 10.1016/j.jviromet.2018.03.005 fvdq0yes 0.623662 Lau_L_2003, Vemulapalli_2009, Jiang_2004, Dinh_2011, Wang_2018 Nemoto_2015, Gueudin_2003
58 Kumar_2010 Diagnosis of Novel Pandemic Influenza Virus 2009 H1N1 in Hospitalized Patients Kumar, P.; Kumar, B.; Gupta, A.; Sharma, B.; Vijayan, V. K.; Khare, S.; Singh, V.; Daga, M. K.; Chadha, M. S.; Mishra, A. C.; Kaur, H.; Khanna, M. 2010 2010-06-01 PMC N PMC3550770 23637477.0 10.1007/s13337-010-0005-0 cuhx1dfq 0.616445 Dinh_2011, Kang_2010, Chen_2010
59 Noh_J_2017 Simultaneous detection of severe acute respiratory syndrome, Middle East respiratory syndrome, and related bat coronaviruses by real-time reverse transcription PCR Noh, Ji Yeong; Yoon, Sun-Woo; Kim, Doo-Jin; Lee, Moo-Seung; Kim, Ji-Hyung; Na, Woonsung; Song, Daesub; Jeong, Dae Gwin; Kim, Hye Kwon 2017 2017-02-20 PMC N PMC7086956 28220326.0 10.1007/s00705-017-3281-9 dwhyx97y 0.612586 Dinh_2011, Escutenaire_2006 Keyaerts_2006, Shirato_2014, Shirato_2007
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61 Shi_X_2016 A multiplex real-time PCR panel assay for simultaneous detection and differentiation of 12 common swine viruses Shi, Xiju; Liu, Xuming; Wang, Qin; Das, Amaresh; Ma, Guiping; Xu, Lu; Sun, Qing; Peddireddi, Lalitha; Jia, Wei; Liu, Yanhua; Anderson, Gary; Bai, Jianfa; Shi, Jishu 2016 2016-10-31 PMC N PMC7119729 27506582.0 10.1016/j.jviromet.2016.08.005 2z664ffl 0.608746 Dinh_2011, Lau_L_2003, Wang_2018, Benson_2008, Jiang_2004 Huang_2009, Xiao_2014
62 Li_Y_2013 Simultaneous detection of hemagglutinin and neuraminidase genes of novel influenza A (H7N9) by duplex real-time reverse transcription polymerase chain reaction Li, Yan; Wu, Tao; Qi, Xian; Ge, Yiyue; Guo, Xiling; Wu, Bin; Yu, Huiyan; Zhu, Yefei; Shi, Zhiyang; Wang, Hua; Cui, Lunbiao; Zhou, Minghao 2013 2013-12-31 PMC N PMC7113656 24001700.0 10.1016/j.jviromet.2013.08.021 z849jvq5 0.608221 Dinh_2011, Kang_2010 Shirato_2007
63 Thuy_Tien_2018 Development of a Rapid Fluorescent Immunochromatographic Test to Detect Respiratory Syncytial Virus Thuy Tien, Trinh Thi; Park, Hyun; Tuong, Hien Thi; Yu, Seung-Taek; Choi, Du-Young; Yeo, Seon-Ju 2018 2018-10-02 COMM-USE N PMC6212954 30279406.0 10.3390/ijms19103013 x0o0q5sz 0.607240 Dinh_2011, Kang_2010, Escutenaire_2006, Chen_2010 Shirato_2007, Chen_2012
64 Taylor_2019 Analytical evaluation of the microarray-based FluChip-8G Influenza A+B Assay Taylor, Amber W.; Dawson, Erica D.; Blair, Rebecca H.; Johnson, James E.; Slinskey, Amelia H.; Smolak, Andrew W.; Toth, Evan; Liikanen, Kyle; Stoughton, Robert S.; Smith, Catherine; Talbot, Sarah; Rowlen, Kathy L. 2019 2019-11-30 PMC N PMC6779046 31271790.0 10.1016/j.jviromet.2019.113686 l3gz0l4b 0.606854 Dinh_2011, Kang_2010 Li_J_2012
65 Ma_L_2019 Development of a SYBR green-based real-time RT-PCR assay for rapid detection of the emerging swine acute diarrhea syndrome coronavirus Ma, Lei; Zeng, Fanwen; Cong, Feng; Huang, Bihong; Huang, Ren; Ma, Jingyun; Guo, Pengju 2019 2019-03-31 PMC Y PMC7113735 30593837.0 10.1016/j.jviromet.2018.12.010 kzudasop 0.606659 Lau_L_2003, Jiang_2004, Dinh_2011, Wang_2018, Vemulapalli_2009 Zhou_2018, Nemoto_2015, Ma_L_2018
66 Sun_N_2018 Reverse transcription recombinase polymerase amplification with lateral flow dipsticks for detection of influenza A virus and subtyping of H1 and H3 Sun, Ning; Wang, Weiping; Wang, Jie; Yao, Xinyue; Chen, Fangfang; Li, Xiaojun; Yinglei, Yi; Chen, Bo 2018 2018-12-31 PMC N PMC7127182 30394299.0 10.1016/j.mcp.2018.10.004 z7bd3a91 0.605401 Dinh_2011, Vemulapalli_2009, Kang_2010, Stefańska_2013 Zhang_2014, Nemoto_2015
67 Huh_H_2017 Performance Evaluation of the PowerChek MERS (upE & ORF1a) Real-Time PCR Kit for the Detection of Middle East Respiratory Syndrome Coronavirus RNA Huh, Hee Jae; Kim, Ji-Youn; Kwon, Hyeon Jeong; Yun, Sun Ae; Lee, Myoung-Keun; Ki, Chang-Seok; Lee, Nam Yong; Kim, Jong-Won 2017 2017-08-16 NONCOMM N PMC5587821 28840986.0 10.3343/alm.2017.37.6.494 i4tevhqf 0.604752 Lau_L_2003, Dinh_2011, Jiang_2004, Wang_2018, Vemulapalli_2009 Nemoto_2015
68 Zhou_2018 Development of a TaqMan-based real-time RT-PCR assay for the detection of SADS-CoV associated with severe diarrhea disease in pigs Zhou, Ling; Sun, Yuan; Wu, Jiao-ling; Mai, Kai-jie; Chen, Gui-hua; Wu, Zi-xian; Bai, Yang; Li, Di; Zhou, Zhi-hai; Cheng, Jian; Wu, Rui-ting; Zhang, Xiang-bin; Ma, Jing-yun 2018 2018-05-31 PMC Y PMC7113665 29427670.0 10.1016/j.jviromet.2018.02.002 wue6s07z 0.604148 Dinh_2011, Lau_L_2003, Li_H_2019, Benson_2008, Jiang_2004 Ma_L_2019, Nemoto_2015
69 Fellahi_2016 Comparison of SYBR green I real-time RT-PCR with conventional agarose gel-based RT-PCR for the diagnosis of infectious bronchitis virus infection in chickens in Morocco Fellahi, Siham; Harrak, Mehdi El; Kuhn, Jens H.; Sebbar, Ghizlane; Bouaiti, El Arbi; Khataby, Khadija; Fihri, Ouafae Fassi; Houadfi, Mohammed El; Ennaji, My Mustapha 2016 2016-04-22 COMM-USE N PMC4841946 27106608.0 10.1186/s13104-016-2037-z w0859b3c 0.591747 Dinh_2011, Kang_2010, Escutenaire_2006 Gueudin_2003, Chandrasekar_2015
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74 Vabret_2001 Direct diagnosis of human respiratory coronaviruses 229E and OC43 by the polymerase chain reaction Vabret, Astrid; Mouthon, Franck; Mourez, Thomas; Gouarin, Stephanie; Petitjean, Joëlle; Freymuth, François 2001 2001-09-30 PMC N PMC7119936 11483217.0 10.1016/s0166-0934(01)00343-3 ccdj7137 0.580856 Dinh_2011 Gueudin_2003
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77 Wu_X_2019 Simultaneous and visual detection of infectious bronchitis virus and Newcastle disease virus by multiple LAMP and lateral flow dipstick Wu, Xuan; Song, Zengxu; Zhai, Xiwen; Zuo, Lei; Mei, Xueran; Xiang, Rong; Kang, Zhuangzhuang; Zhou, Long; Wang, Hongning 2019 2019-11-01 PMC N PMC7107193 31265112.0 10.3382/ps/pez372 jtvez46y 0.578805 Dinh_2011, Chen_2010, Chen_2010, Kang_2010 Mu_Y_2014, Nemoto_2015, Shirato_2007
78 Pongsiri_2012 Multiplex real–time RT–PCR for detecting chikungunya virus and dengue virus Pongsiri, Piyathida; Praianantathavorn, Kesmanee; Theamboonlers, Apiradee; Payungporn, Sunchai; Poovorawan, Yong 2012 2012-05-31 PMC N PMC7128799 22546647.0 10.1016/s1995-7645(12)60055-8 u43ehmut 0.576577 Nemoto_2015, Shirato_2007
79 Mu_Y_2014 New method for the visual detection of human respiratory syncytial virus using reverse transcription loop-mediated amplification Mu, Yonglin; Zeng, Jiawei; Chen, Qianqian; Liu, Jia; Wang, Lili; Yao, Fujia; Cui, Meng; He, Zhixiang; Zhang, Chiyu; Xiao, Ming; Lan, Ke 2014 2014-09-15 PMC N PMC7113655 24925133.0 10.1016/j.jviromet.2014.06.005 dfcqhvn9 0.575769 Dinh_2011, Chen_2010, Fan_Q_2012, Chen_2008, Song_2014 Shirato_2007, Gueudin_2003, Stranieri_2017
80 Abera_2014 A SYBR Green I based real time RT-PCR assay for specific detection and quantitation of Peste des petits ruminants virus Abera, Tsegalem; Thangavelu, Ardhanary; Joy Chandran, Navamani Daniel; Raja, Angamuthu 2014 2014-01-14 COMM-USE N PMC3896792 24423231.0 10.1186/1746-6148-10-22 7m71pqu9 0.575764 Dinh_2011, Vemulapalli_2009, Kang_2010, Fan_Q_2012, Chen_2010 Gueudin_2003, Wang_2017
81 Lu_R_2020 SARS-CoV-2 detection using digital PCR for COVID-19 diagnosis, treatment monitoring and criteria for discharge Renfei Lu; Jian Wang; Min Li; Yaqi Wang; Jia Dong; Weihua Cai 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.24.20042689 mskkahwi 0.575761 Lau_L_2003, Jiang_2004, Benson_2008, Vemulapalli_2009, Dinh_2011 Poon_2003
82 Ma_X_2015 A multiplex PCR assay for the detection of five influenza viruses using a dual priming oligonucleotide system Ma, Xuezheng; Xu, Huanzhou; Shi, Lei; Yang, Pengfei; Zhang, Liping; Sun, Xiaohong; Zhen, Wei; Hu, Kongxin 2015 2015-02-25 COMM-USE N PMC4344991 25886516.0 10.1186/s12879-015-0818-y zyf0gswm 0.574962 Dinh_2011, Lau_L_2003, Jiang_2004, Kang_2010, Chen_2010 Li_J_2012, Fallahi_2015
83 Nakauchi_2014 Real-time RT-PCR assays for discriminating influenza B virus Yamagata and Victoria lineages Nakauchi, Mina; Takayama, Ikuyo; Takahashi, Hitoshi; Oba, Kunihiro; Kubo, Hideyuki; Kaida, Atsushi; Tashiro, Masato; Kageyama, Tsutomu 2014 2014-09-01 PMC N 24797457.0 10.1016/j.jviromet.2014.04.016 9gtx4bhp 0.572233 Dinh_2011
84 Yuan_2015 Development of a nanoparticle-assisted PCR assay for detection of porcine epidemic diarrhea virus Yuan, Wanzhe; Li, Yanan; Li, Peng; Song, Qinye; Li, Limin; Sun, Jiguo 2015 2015-08-31 PMC N PMC7113876 25887451.0 10.1016/j.jviromet.2015.04.008 pmwl5w9o 0.570946 Dinh_2011 Xing_2016, Xu_F_2020
85 Chen_2004 Development of a novel real-time RT-PCR assay with LUX primer for the detection of swine transmissible gastroenteritis virus Chen, Ru; Huang, Weiming; Lin, Zhixiong; Zhou, Zhongfang; Yu, Haiqiong; Zhu, Daozhong 2004 2004-12-01 PMC N PMC7119747 15488621.0 10.1016/j.jviromet.2004.08.003 ndralqvr 0.569049 Dinh_2011, Lau_L_2003, Wang_2018, Vemulapalli_2009, Benson_2008 Nemoto_2015, Cuevas-Romero_2013, Zhang_2014
86 Wang_2019 A multiplex real-time PCR assay for the detection and differentiation of the newly emerged porcine circovirus type 3 and continuously evolving type 2 strains in the United States Wang, Yin; Feng, Yuan; Zheng, Wanglong; Noll, Lance; Porter, Elizabeth; Potter, Megan; Cino, Giselle; Peddireddi, Lalitha; Liu, Xuming; Anderson, Gary; Bai, Jianfa 2019 2019-07-31 PMC N PMC7113677 30904590.0 10.1016/j.jviromet.2019.03.011 hzbh7s2t 0.566234 Vemulapalli_2009, Falcone_1997, Lau_L_2003, Kumar_2010 Choudhary_2013, Huang_2009
87 Wan_Z_2016 A Melting Curve-Based Multiplex RT-qPCR Assay for Simultaneous Detection of Four Human Coronaviruses Wan, Zhenzhou; Zhang, Ya’nan; He, Zhixiang; Liu, Jia; Lan, Ke; Hu, Yihong; Zhang, Chiyu 2016 2016-11-23 COMM-USE N PMC5133880 27886052.0 10.3390/ijms17111880 n76iea5g 0.565905 Dinh_2011, Escutenaire_2006, Chen_2010 Nemoto_2015, Stranieri_2017, Mu_Y_2014
88 Douglas_2015 Real-time reverse transcriptase polymerase chain reaction assays for Middle East Respiratory Syndrome Douglas, Christina E.; Kulesh, David A.; Jaissle, James G.; Minogue, Timothy D. 2015 2015-12-31 PMC N PMC7126732 26365228.0 10.1016/j.mcp.2015.09.001 uix2y084 0.562542 Lau_L_2003, Jiang_2004, Wang_2018, Nitsche_2004 Nemoto_2015, Gueudin_2003, Emery_2004
89 Wu_M_2018 Multiplex Detection of Five Canine Viral Pathogens for Dogs as Laboratory Animals by the Luminex xTAG Assay Wu, Miaoli; Cong, Feng; Zhu, Yujun; Lian, Yuexiao; Chen, Meili; Huang, Ren; Guo, Pengju 2018 2018-08-17 COMM-USE N PMC6107692 30174654.0 10.3389/fmicb.2018.01783 6rgm3c4s 0.562510 Dinh_2011, Chen_2010, Vemulapalli_2009, Fan_Q_2012 Wu_M_2018, Wang_2017
90 Garae_2020 Validation of the easyscreen flavivirus dengue alphavirus detection kit based on 3base amplification technology and its application to the 2016/17 Vanuatu dengue outbreak Garae, Crystal; Kalo, Kalkoa; Pakoa, George Junior; Baker, Rohan; Isaacs, Phill; Millar, Douglas Spencer 2020 2020-01-17 COMM-USE N PMC6968865 31951602.0 10.1371/journal.pone.0227550 3lrpcglp 0.559857 Dinh_2011, Benson_2008, Vemulapalli_2009 Nemoto_2015, Zhang_2014
91 Decaro_2008 Detection of bovine coronavirus using a TaqMan-based real-time RT-PCR assay Decaro, Nicola; Elia, Gabriella; Campolo, Marco; Desario, Costantina; Mari, Viviana; Radogna, Arianna; Colaianni, Maria Loredana; Cirone, Francesco; Tempesta, Maria; Buonavoglia, Canio 2008 2008-08-31 PMC N PMC7112840 18579223.0 10.1016/j.jviromet.2008.05.016 pm0fk1a0 0.559546 Lau_L_2003, Dinh_2011, Vemulapalli_2009, Jiang_2004, Falcone_1997 Decaro_2004, Nemoto_2015, Gueudin_2003
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93 Sidoti_2011 Development of a Quantitative Real-Time Nucleic Acid Sequence-Based Amplification Assay with an Internal Control Using Molecular Beacon Probes for Selective and Sensitive Detection of Human Rhinovirus Serotypes Sidoti, Francesca; Bergallo, Massimiliano; Terlizzi, Maria Elena; Piasentin Alessio, Elsa; Astegiano, Sara; Gasparini, Giorgio; Cavallo, Rossana 2011 2011-07-05 PMC N PMC7091405 21728031.0 10.1007/s12033-011-9432-4 0pgcfk6b 0.558728 Benson_2008, Dinh_2011, Wang_2018, Jiang_2004, Li_H_2019 Gueudin_2003, Malik_2013, Niu_P_2016
94 Yuan_2016 Development of a duplex real-time RT-PCR for the simultaneous detection and differentiation of Theiler’s murine encephalomyelitis virus and rat theilovirus Yuan, Wen; Wang, Jing; Xu, Fengjiao; Huang, Bihong; Lian, Yuexiao; Rao, Dan; Yin, Xueqin; Wu, Miaoli; Zhu, Yujun; Zhang, Yu; Huang, Ren; Guo, Pengju 2016 2016-10-31 PMC N PMC7119687 27396678.0 10.1016/j.jviromet.2016.07.004 aul4ifso 0.555039 Jiang_2004, Lau_L_2003, Dinh_2011, Vemulapalli_2009, Falcone_1997 Gueudin_2003
95 CHEN_2010 Use of a Multiplex RT-PCR Assay for Simultaneous Detection of the North American Genotype Porcine Reproductive and Respiratory Syndrome Virus, Swine Influenza Virus and Japanese Encephalitis Virus CHEN, Hong-ying; WEI, Zhan-yong; ZHANG, Hong-ying; LÜ, Xiao-li; ZHENG, Lan-lan; CUI, Bao-an; LIU, Jinpeng; ZHU, Qian-lei; WANG, Zi-xin 2010 2010-07-31 PMC N PMC7129351 10.1016/s1671-2927(09)60189-9 91ypig4r 0.554877 Dinh_2011, Falcone_1997, Vemulapalli_2009, Kang_2010, Lau_L_2003 Zhao_2019
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97 Lorusso_2010 One-step real-time RT-PCR for pandemic influenza A virus (H1N1) 2009 matrix gene detection in swine samples Lorusso, Alessio; Faaberg, Kay S.; Killian, Mary Lea; Koster, Leo; Vincent, Amy L. 2010 2010-03-31 PMC N PMC7119756 20005904.0 10.1016/j.jviromet.2009.12.002 1zyy536y 0.545373 Kumar_2010
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99 Cuevas-Romero_2013 Development of a real-time RT-PCR method for detection of porcine rubulavirus (PoRV-LPMV) Cuevas-Romero, Sandra; Blomström, Anne-Lie; Alvarado, Arcelia; Hernández-Jauregui, Pablo; Rivera-Benitez, Francisco; Ramírez-Mendoza, Humberto; Berg, Mikael 2013 2013-04-30 PMC N PMC7113651 23305816.0 10.1016/j.jviromet.2012.12.009 gqmghn49 0.541001 Lau_L_2003, Benson_2008, Wang_2018, Thiel_2002, Vemulapalli_2009 Nemoto_2015, Decaro_2004, Wang_2018
100 Poon_2004 Detection of SARS Coronavirus in Patients with Severe Acute Respiratory Syndrome by Conventional and Real-Time Quantitative Reverse Transcription-PCR Assays Poon, Leo L M; Chan, Kwok Hung; Wong, On Kei; Cheung, Timothy K W; Ng, Iris; Zheng, Bojian; Seto, Wing Hong; Yuen, Kwok Yung; Guan, Yi; Peiris, Joseph S M 2004 2004-01-01 PMC Y PMC7108136 14709637.0 10.1373/clinchem.2003.023663 s7qauqll 0.540810 Lau_L_2003, Dinh_2011, Jiang_2004, Vemulapalli_2009, Falcone_1997 Keyaerts_2006, Poon_2003, Gueudin_2003
101 Ma_L_2018 Development of a Conventional RT-PCR Assay for Rapid Detection of Porcine Deltacoronavirus with the Same Detection Limit as a SYBR Green-Based Real-Time RT-PCR Assay Ma, Lei; Zeng, Fanwen; Huang, Bihong; Cong, Feng; Huang, Ren; Ma, Jingyun; Guo, Pengju 2018 2018-11-06 COMM-USE N PMC6247729 30533434.0 10.1155/2018/5035139 68cr4amg 0.538818 Lau_L_2003, Jiang_2004, Wang_2018, Benson_2008, Li_H_2019 Nemoto_2015, Gueudin_2003, Cuevas-Romero_2013
102 Losurdo_2015 Development of a TaqMan assay for sensitive detection of all pestiviruses infecting cattle, including the emerging HoBi-like strains Losurdo, Michele; Mari, Viviana; Lucente, Maria Stella; Colaianni, Maria Loredana; Padalino, Iolanda; Cavaliere, Nicola; Buonavoglia, Canio; Decaro, Nicola 2015 2015-11-30 PMC N PMC7113749 26300370.0 10.1016/j.jviromet.2015.08.013 iucu98wx 0.538776 Dinh_2011, Fan_Q_2012 Hakhverdyan_2005, Nemoto_2015
103 Sakurai_2011 Rapid typing of influenza viruses using super high-speed quantitative real-time PCR Sakurai, Akira; Nomura, Namiko; Nanba, Reiko; Sinkai, Takayuki; Iwaki, Tsunehito; Obayashi, Taminori; Hashimoto, Kazuhiro; Hasegawa, Michiya; Sakoda, Yoshihiro; Naito, Akihiro; Morizane, Yoshihito; Hosaka, Mitsugu; Tsuboi, Kunio; Kida, Hiroshi; Kai, Akemi; Shibasaki, Futoshi 2011 2011-12-31 PMC N PMC7119501 21889540.0 10.1016/j.jviromet.2011.08.015 84vf5bts 0.537528 Dinh_2011, Kang_2010 Malik_2013, Gueudin_2003
104 Huang_2009 Development of a reverse transcription multiplex real-time PCR for the detection and genotyping of classical swine fever virus Huang, Yu-Liang; Pang, Victor Fei; Pan, Chu-Hsiang; Chen, Tsu-Han; Jong, Ming-Hwa; Huang, Tien-Shine; Jeng, Chian-Ren 2009 2009-09-30 PMC N PMC7112934 19414034.0 10.1016/j.jviromet.2009.04.029 06c3ymc3 0.537087 Dinh_2011, Vemulapalli_2009, Falcone_1997, Kang_2010, Chen_2010 Decaro_2004, Li_H_2019
105 Sikazwe_2016 Reliable quantification of rhinovirus species C using real-time PCR Sikazwe, Chisha T.; Chidlow, Glenys R.; Imrie, Allison; Smith, David W. 2016 2016-09-30 PMC N 27216896.0 10.1016/j.jviromet.2016.05.014 26q3j35g 0.535843 Vemulapalli_2009, Dinh_2011, Benson_2008
106 Mari_2016 Multiplex real-time RT-PCR assay for bovine viral diarrhea virus type 1, type 2 and HoBi-like pestivirus Mari, Viviana; Losurdo, Michele; Lucente, Maria Stella; Lorusso, Eleonora; Elia, Gabriella; Martella, Vito; Patruno, Giovanni; Buonavoglia, Domenico; Decaro, Nicola 2016 2016-03-31 PMC N PMC7113868 26709100.0 10.1016/j.jviromet.2015.12.003 nx9fg4yn 0.531677 Dinh_2011 Losurdo_2015
107 Nemoto_2015 Rapid detection of equine coronavirus by reverse transcription loop-mediated isothermal amplification Nemoto, Manabu; Morita, Yoshinori; Niwa, Hidekazu; Bannai, Hiroshi; Tsujimura, Koji; Yamanaka, Takashi; Kondo, Takashi 2015 2015-04-30 PMC N PMC7113660 25682750.0 10.1016/j.jviromet.2015.02.001 fa0mnbzg 0.531677 Lau_L_2003, Jiang_2004, Wang_2018, Li_H_2019, Chen_2010 Stranieri_2017, Li_H_2019, Zhang_2014
108 Erlandsson_2011 The Microbial Detection Array Combined with Random Phi29-Amplification Used as a Diagnostic Tool for Virus Detection in Clinical Samples Erlandsson, Lena; Rosenstierne, Maiken W.; McLoughlin, Kevin; Jaing, Crystal; Fomsgaard, Anders 2011 2011-08-10 COMM-USE N PMC3154197 21853040.0 10.1371/journal.pone.0022631 ngn9x3lc 0.531122 Dinh_2011 Giles_2015, Li_J_2012
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110 Amer_2013 A new approach for diagnosis of bovine coronavirus using a reverse transcription recombinase polymerase amplification assay Amer, H.M.; Abd El Wahed, A.; Shalaby, M.A.; Almajhdi, F.N.; Hufert, F.T.; Weidmann, M. 2013 2013-11-30 PMC N PMC7113639 23811231.0 10.1016/j.jviromet.2013.06.027 a5grrd7z 0.528788 Dinh_2011, Fan_Q_2012, Lau_L_2003, Emery_2004, Chen_2010 Nemoto_2015, Stranieri_2017
111 Black_2002 A rapid RT-PCR method to differentiate six established genotypes of rabies and rabies-related viruses using TaqMan™ technology Black, Elizabeth M; Lowings, J.Paul; Smith, Jemma; Heaton, Paul R; McElhinney, Lorraine M 2002 2002-08-31 PMC N PMC7119615 12176139.0 10.1016/s0166-0934(02)00062-9 muskjaw3 0.525442 Dinh_2011, Falcone_1997, Pulford_2004
112 Hanaki_2013 Reverse transcription-loop-mediated isothermal amplification for the detection of rodent coronaviruses Hanaki, Ken-Ichi; Ike, Fumio; Hatakeyama, Rika; Hirano, Norio 2013 2013-02-28 PMC N PMC7112798 23123121.0 10.1016/j.jviromet.2012.10.008 992l4een 0.525442 Dinh_2011, Fan_Q_2012, Chen_2010, Chen_2008, Lau_L_2003 Nemoto_2015, Stranieri_2017, Shirato_2007
113 Huang_2019 A TaqMan-probe-based multiplex real-time RT-qPCR for simultaneous detection of porcine enteric coronaviruses Huang, Xin; Chen, Jianing; Yao, Gang; Guo, Qingyong; Wang, Jinquan; Liu, Guangliang 2019 2019-04-26 PMC N PMC7080015 31025076.0 10.1007/s00253-019-09835-7 zpeh8pmc 0.525137 Dinh_2011, Escutenaire_2006, Jiang_2004, Vemulapalli_2009, Lau_L_2003 Nemoto_2015, Wang_2018, Zhou_2018
114 Zhuang_2019 Polymerase chain reaction combined with fluorescent lateral flow immunoassay based on magnetic purification for rapid detection of canine parvovirus 2 Zhuang, Linlin; Ji, Yongxin; Tian, Peilong; Wang, Kaixuan; Kou, Chengkun; Gu, Ning; Zhang, Yu 2019 2019-01-17 COMM-USE N PMC6337814 30654823.0 10.1186/s12917-019-1774-3 1c5ug64m 0.521515 Wang_2018, Dinh_2011, Lau_L_2003, Li_H_2019, Jiang_2004 Yang_2009, Malik_2013, Wang_2017
115 Wilkes_2015 An insulated isothermal PCR method on a field-deployable device for rapid and sensitive detection of canine parvovirus type 2 at points of need Wilkes, Rebecca P.; Lee, Pei-Yu A.; Tsai, Yun-Long; Tsai, Chuan-Fu; Chang, Hsiu-Hui; Chang, Hsiao-Fen G.; Wang, Hwa-Tang T. 2015 2015-08-31 PMC N PMC7119629 25889355.0 10.1016/j.jviromet.2015.04.007 09dm8vu2 0.518833 Dinh_2011, Wang_2018, Vemulapalli_2009, Fan_Q_2012, Lau_L_2003 Zhuang_2019, Wang_2017
116 Peiris_2007 Detection of SARS Coronavirus in Humans and Animals by Conventional and Quantitative (Real Time) Reverse Transcription Polymerase Chain Reactions Peiris, J.S. Malik; Poon, Leo L.M. 2007 2007-11-28 PMC N PMC7120234 19057863.0 10.1007/978-1-59745-181-9_6 ssxq1ns2 0.518081 Dinh_2011, Jiang_2004, Emery_2004 Keyaerts_2006, Poon_2003, Poon_2004
117 Lee_H_2010 Diagnostic Testing for Pandemic Influenza in Singapore A Novel Dual-Gene Quantitative Real-Time RT-PCR for the Detection of Influenza A/H1N1/2009 Lee, Hong Kai; Lee, Chun Kiat; Loh, Tze Ping; Tang, Julian Wei-Tze; Chiu, Lily; Tambyah, Paul A.; Sethi, Sunil K.; Koay, Evelyn Siew-Chuan 2010 2010-09-30 PMC N 10.2353/jmoldx.2010.100010 gjek77ny 0.517257 Dinh_2011
118 Chen_2015 Development and Evaluation of a SYBR Green–Based Real-Time Multiplex RT-PCR Assay for Simultaneous Detection and Serotyping of Dengue and Chikungunya Viruses Chen, Huixin; Parimelalagan, Mariya; Lai, Yee Ling; Lee, Kim Sung; Koay, Evelyn Siew-Chuan; Hapuarachchi, Hapuarachchige C.; Ng, Lee Ching; Ho, Phui San; Chu, Justin Jang Hann 2015 2015-11-30 PMC N PMC7106138 26455921.0 10.1016/j.jmoldx.2015.06.008 z3js3mr4 0.514995 Yang_2009, Nemoto_2015, Neeraja_2015
119 Wang_2019 Development and evaluation of recombinase-aided amplification assays incorporating competitive internal controls for detection of human adenovirus serotypes 3 and 7 Wang, Rui-huan; Zhang, Hong; Zhang, Yi; Li, Xin-na; Shen, Xin-xin; Qi, Ju-ju; Fan, Guo-hao; Xiang, Xing-yu; Zhan, Zhi-fei; Chen, Zi-wei; Ma, Xue-jun 2019 2019-07-01 COMM-USE N PMC6604330 31262315.0 10.1186/s12985-019-1178-9 kt5f672s 0.514612 Dinh_2011, Kang_2010, Jiang_2004, Lau_L_2003, Chen_2010 Moore_2017, Reddy_2011, Ma_L_2018
120 Clancy_2015 Development of a rapid recombinase polymerase amplification assay for the detection of Streptococcus pneumoniae in whole blood Clancy, Eoin; Higgins, Owen; Forrest, Matthew S.; Boo, Teck Wee; Cormican, Martin; Barry, Thomas; Piepenburg, Olaf; Smith, Terry J. 2015 2015-10-29 COMM-USE N PMC4625855 26515409.0 10.1186/s12879-015-1212-5 hr1f3g28 0.514511 Benson_2008, Vemulapalli_2009
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122 Corman_2016 Assay optimization for molecular detection of Zika virus Corman, Victor M; Rasche, Andrea; Baronti, Cecile; Aldabbagh, Souhaib; Cadar, Daniel; Reusken, Chantal BEM; Pas, Suzan D; Goorhuis, Abraham; Schinkel, Janke; Molenkamp, Richard; Kümmerer, Beate M; Bleicker, Tobias; Brünink, Sebastian; Eschbach-Bludau, Monika; Eis-Hübinger, Anna M; Koopmans, Marion P; Schmidt-Chanasit, Jonas; Grobusch, Martin P; de Lamballerie, Xavier; Drosten, Christian; Drexler, Jan Felix 2016 2016-12-01 COMM-USE N PMC5153932 27994281.0 10.2471/blt.16.175950 ylqcql0i 0.510301 Dinh_2011, Vemulapalli_2009, Benson_2008, Falcone_1997, Fan_Q_2012 Nemoto_2015
123 Asano_2010 Multiplex semi-nested RT-PCR with exogenous internal control for simultaneous detection of bovine coronavirus and group A rotavirus Asano, Karen Miyuki; de Souza, Sibele Pinheiro; de Barros, Iracema Nunes; Ayres, Giselle Razera; Silva, Sheila Oliveira Souza; Richtzenhain, Leonardo José; Brandão, Paulo E. 2010 2010-11-30 PMC N PMC7119652 20723564.0 10.1016/j.jviromet.2010.08.008 zw0my8cq 0.507191 Dinh_2011, Falcone_1997, Escutenaire_2006, Vemulapalli_2009, Lau_L_2003 Takiuchi_2006
124 Benson_2008 Development and Evaluation of a Novel Multiplex PCR Technology for Molecular Differential Detection of Bacterial Respiratory Disease Pathogens Benson, Robert; Tondella, Maria L.; Bhatnagar, Julu; Carvalho, Maria da Glória S.; Sampson, Jacquelyn S.; Talkington, Deborah F.; Whitney, Anne M.; Mothershed, Elizabeth; McGee, Lesley; Carlone, George; McClee, Vondguraus; Guarner, Jeannette; Zaki, Sherif; Dejsiri, Surang; Cronin, K.; Han, Jian; Fields, Barry S. 2008 2008-04-09 None N PMC2446872 18400916.0 10.1128/jcm.01858-07 z73pxely 0.506183 Lau_L_2003, Wang_2018, Vemulapalli_2009, Li_H_2019 Li_J_2012
125 LIU_D_2018 One-step triplex PCR/RT-PCR to detect canine distemper virus, canine parvovirus and canine kobuvirus LIU, Dafei; LIU, Fei; GUO, Dongchun; HU, Xiaoliang; LI, Zhijie; LI, Zhigang; MA, Jianzhang; LIU, Chunguo 2018 2018-01-23 NONCOMM N PMC6656820 29367517.0 10.1292/jvms.17-0442 ocdlh310 0.505277 Wang_2017
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135 Brown_2020 Comparison of SARS-CoV2 N gene real-time RT-PCR targets and commercially available mastermixes Julianne R Brown; Denise O’Sullivan; Rui PA Pereira; Alexandra S Whale; Eloise Busby; Jim Huggett; Kathryn Harris 2020 2020-04-19 BioRxiv Y 10.1101/2020.04.17.047118 z6qqy858 0.496443 Lau_L_2003, Wang_2018, Jiang_2004, Thiel_2002
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144 Juang_2004 Coupling multiplex RT-PCR to a gene chip assay for sensitive and semiquantitative detection of severe acute respiratory syndrome-coronavirus Juang, Jyh-Lyh; Chen, Tsan-Chi; Jiang, Shih Sheng; Hsiung, Chao A; Chen, Wei-Chen; Chen, Guang-Wu; Lin, Shiang-Ming; Lin, Jih-Hui; Chiu, Shu-Chun; Lai, Yiu-Kay 2004 2004-06-14 PMC N PMC7100734 15195120.0 10.1038/labinvest.3700136 r8vfssev 0.483529 Jiang_2004, Dinh_2011, Lau_L_2003, Emery_2004 Nemoto_2015
145 Jones_2011 Development and Validation of RT‐PCR Tests for the Detection and S1 Genotyping of Infectious Bronchitis Virus and Other Closely Related Gammacoronaviruses Within Clinical Samples Jones, R. M.; Ellis, R. J.; Cox, W. J.; Errington, J.; Fuller, C.; Irvine, R. M.; Wakeley, P. R. 2011 2011-04-07 PMC N PMC7169724 21477114.0 10.1111/j.1865-1682.2011.01222.x yjt3q9ph 0.483190 Dinh_2011, Vemulapalli_2009, Falcone_1997, Benson_2008
146 Wu_M_2018 Rapid detection of three rabbit pathogens by use of the Luminex x-TAG assay Wu, Miaoli; Zhu, Yujun; Cong, Feng; Rao, Dan; Yuan, Wen; Wang, Jing; Huang, Bihong; Lian, Yuexiao; Zhang, Yu; Huang, Ren; Guo, Pengju 2018 2018-04-07 COMM-USE N PMC5889542 29625588.0 10.1186/s12917-018-1438-8 ssmfhoew 0.482680 Dinh_2011, Benson_2008, Wang_2018, Vemulapalli_2009, Lau_L_2003 Wu_M_2019, Chen_2012
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152 Yam_W_2005 Clinical evaluation of real-time PCR assays for rapid diagnosis of SARS coronavirus during outbreak and post-epidemic periods Yam, W.C.; Chan, K.H.; Chow, K.H.; Poon, L.L.M.; Lam, H.Y.; Yuen, K.Y.; Seto, W.H.; Peiris, J.S.M. 2005 2005-05-31 PMC N PMC7108323 15797361.0 10.1016/j.jcv.2004.09.029 qxlac437 0.477191 Lau_L_2003, Jiang_2004, Dinh_2011, Kang_2010, Vemulapalli_2009 Poon_2003, Lau_L_2003, Keyaerts_2006
153 Yu_X_2015 Development of a real-time reverse transcription loop-mediated isothermal amplification method for the rapid detection of porcine epidemic diarrhea virus Yu, Xuewu; Shi, Lin; Lv, Xiaoping; Yao, Wei; Cao, Minghui; Yu, Hanxun; Wang, Xiurong; Zheng, Shimin 2015 2015-05-14 COMM-USE N PMC4459462 25972083.0 10.1186/s12985-015-0297-1 cpwmnj3x 0.474677 Dinh_2011, Chen_2010, Chen_2008, Jiang_2004, Fan_Q_2012 Malik_2013, Ren_X_2011, Chen_2009
154 Yu_D_2012 Simultaneous Detection and Differentiation of Human Papillomavirus Genotypes 6, 11, 16 and 18 by AllGlo Quadruplex Quantitative PCR Yu, Daojun; Chen, Yu; Wu, Shenghai; Wang, Baohong; Tang, Yi-Wei; Li, Lanjuan 2012 2012-11-09 COMM-USE N PMC3494670 23152833.0 10.1371/journal.pone.0048972 iylw1bvw 0.472698 Wang_2018, Dinh_2011, Vemulapalli_2009, Jiang_2004, Benson_2008 Reddy_2011, Thuy_Tien_2018
155 Li_H_2019 Development of a reverse transcription-loop-mediated isothermal amplification (RT-LAMP) assay for the detection of porcine pegivirus Li, Hao; Li, Kai; Bi, Zhen; Gu, Jun; Song, Deping; Lei, Dan; Luo, Suoxian; Huang, Dongyan; Wu, Qiong; Ding, Zhen; Wang, Leyi; Ye, Yu; Tang, Yuxin 2019 2019-08-31 PMC N PMC7113777 31022411.0 10.1016/j.jviromet.2019.04.019 98sqovwb 0.471921 Lau_L_2003, Wang_2018, Jiang_2004, Dinh_2011 Nemoto_2015, Chen_2010, Zhang_2014
156 Henriques_2018 Development and validation of a real-time PCR for the detection and quantification of porcine circovirus type 2 Henriques, Ana Margarida; Duarte, Margarida; Barros, Sílvia Carla; Fagulha, Teresa; Ramos, Fernanda; Luís, Tiago; Fevereiro, Miguel 2018 2018-07-17 PMC N PMC6111954 30159371.0 10.1007/s13337-018-0476-y tirod4t6 0.469119 Dinh_2011 Zhao_2011
157 Hull_2008 A duplex real-time reverse transcriptase polymerase chain reaction assay for the detection of St. Louis encephalitis and eastern equine encephalitis viruses Hull, Rene; Nattanmai, Seela; Kramer, Laura D.; Bernard, Kristen A.; Tavakoli, Norma P. 2008 2008-11-30 None N PMC2615585 18715737.0 10.1016/j.diagmicrobio.2008.07.004 xwqd50mu 0.467085 Dinh_2011 Wang_2009
158 Yang_2010 Dual detection of Legionella pneumophila and Legionella species by real-time PCR targeting the 23S-5S rRNA gene spacer region Yang, G.; Benson, R.; Pelish, T.; Brown, E.; Winchell, J.M.; Fields, B. 2010 2010-03-31 PMC N PMC7129662 19438641.0 10.1111/j.1469-0691.2009.02766.x vqu4qhu7 0.462565 Dinh_2011, Benson_2008 Gueudin_2003
159 Malik_2013 Rapid detection of human rotavirus using NSP4 gene specific reverse transcription loop-mediated isothermal amplification assay Malik, Yashpal Singh; Sharma, Kuldeep; Kumar, Naveen; Shivachandra, Sathish B.; Rawat, Vinita; Rakholia, Ritu; Ranjan, Rajeev; Ganesh, Balasubramanian; Parida, ManMohan 2013 2013-07-26 PMC N PMC3784908 24426285.0 10.1007/s13337-013-0147-y 7k8j3y1s 0.460265 Wang_2018, Dinh_2011, Lau_L_2003, Benson_2008, Li_H_2019 Nemoto_2015, Shirato_2007
160 Young_2006 Real-time RT-PCR detection of Bovine Viral Diarrhoea virus in whole blood using an external RNA reference Young, N.J.; Thomas, C.J.; Collins, M.E.; Brownlie, J. 2006 2006-12-31 PMC N PMC7112878 17030066.0 10.1016/j.jviromet.2006.08.008 5er9klxl 0.459940 Falcone_1997, Vemulapalli_2009, Lau_L_2003, Dinh_2011 Gueudin_2003, Decaro_2004, Dye_C_2008
161 SUNAGA_2019 Development of a one-run real-time PCR detection system for pathogens associated with porcine respiratory diseases SUNAGA, Fujiko; TSUCHIAKA, Shinobu; KISHIMOTO, Mai; AOKI, Hiroshi; KAKINOKI, Mari; KURE, Katsumasa; OKUMURA, Hanako; OKUMURA, Maho; OKUMURA, Atsushi; NAGAI, Makoto; OMATSU, Tsutomu; MIZUTANI, Tetsuya 2019 2019-12-23 NONCOMM N PMC7041981 31866601.0 10.1292/jvms.19-0063 0pkbbb99 0.459663 KISHIMOTO_2017, Xiao_2008
162 Hou_P_2017 Rapid detection of infectious bovine Rhinotracheitis virus using recombinase polymerase amplification assays Hou, Peili; Wang, Hongmei; Zhao, Guimin; He, Chengqiang; He, Hongbin 2017 2017-12-13 COMM-USE N PMC5729238 29237466.0 10.1186/s12917-017-1284-0 bgrgzfoo 0.458855 Dinh_2011, Falcone_1997, Vemulapalli_2009, Fan_Q_2012 Wang_2017, Nemoto_2015
163 Fukuda_2012 Development and application of one-step multiplex reverse transcription PCR for simultaneous detection of five diarrheal viruses in adult cattle Fukuda, Masaharu; Kuga, Kazufumi; Miyazaki, Ayako; Suzuki, Tohru; Tasei, Keito; Aita, Tsunehiko; Mase, Masaji; Sugiyama, Makoto; Tsunemitsu, Hiroshi 2012 2012-03-11 PMC N PMC7086690 22407445.0 10.1007/s00705-012-1271-5 al07fo6q 0.457909 Dinh_2011, Vemulapalli_2009, Fan_Q_2012, Falcone_1997, Jiang_2004 Nemoto_2015, Asano_2010
164 Wang_2019 Development of a triplex real-time RT-PCR assay for detection and differentiation of three US genotypes of porcine hemagglutinating encephalomyelitis virus Wang, Leyi; Eggett, Therese E.; Lanka, Saraswathi; Fredrickson, Richard L.; Li, Ganwu; Zhang, Yan; Yoo, Dongwan; Bowman, Andrew S. 2019 2019-07-31 PMC N PMC7113741 30959064.0 10.1016/j.jviromet.2019.04.008 fkg8d6ym 0.455913 Dinh_2011, Nitsche_2004
165 Sun_Y_2019 Simultaneous detection and differentiation of canine parvovirus and feline parvovirus by high resolution melting analysis Sun, Yaru; Cheng, Yuening; Lin, Peng; Zhang, Hewei; Yi, Li; Tong, Mingwei; Cao, Zhigang; Li, Shuang; Cheng, Shipeng; Wang, Jianke 2019 2019-05-10 COMM-USE N PMC6511188 31077252.0 10.1186/s12917-019-1898-5 4rc5qbcb 0.454850 Dinh_2011
166 Adachi_2004 Comprehensive detection and identification of human coronaviruses, including the SARS-associated coronavirus, with a single RT-PCR assay Adachi, D.; Johnson, G.; Draker, R.; Ayers, M.; Mazzulli, T.; Talbot, P.J.; Tellier, R. 2004 2004-12-01 PMC N PMC7112817 15488617.0 10.1016/j.jviromet.2004.07.008 nvilxnzl 0.453708 Pyrc_2011
167 Lu_X_2016 Quantitative real-time PCR assays for detection and type-specific identification of the endemic species C human adenoviruses Lu, Xiaoyan; Erdman, Dean D. 2016 2016-11-30 PMC N 27363737.0 10.1016/j.jviromet.2016.05.020 pu8gjv7q 0.450998 Dinh_2011, Falcone_1997
168 Li_H_2015 Survey and Visual Detection of Zaire ebolavirus in Clinical Samples Targeting the Nucleoprotein Gene in Sierra Leone Li, Huan; Wang, Xuesong; Liu, Wei; Wei, Xiao; Lin, Weishi; Li, Erna; Li, Puyuan; Dong, Derong; Cui, Lifei; Hu, Xuan; Li, Boxing; Ma, Yanyan; Zhao, Xiangna; Liu, Chao; Yuan, Jing 2015 2015-12-01 COMM-USE N PMC4664619 26648918.0 10.3389/fmicb.2015.01332 3yze821v 0.450462 Dinh_2011, Chen_2010, Fan_Q_2012, Kang_2010, Lau_L_2003 Stranieri_2017, Mu_Y_2014, Njiru_2008, Nemoto_2015
169 Le_T_2020 Development of a Multiplex RT-qPCR for the Detection of Different Clades of Avian Influenza in Poultry Le, Tran Bac; Kim, Hye Kwon; Na, Woonsung; Le, Van Phan; Song, Min-Suk; Song, Daesub; Jeong, Dae Gwin; Yoon, Sun-Woo 2020 2020-01-15 COMM-USE N PMC7019278 31952218.0 10.3390/v12010100 5dub8nv7 0.448693 Dinh_2011 Nemoto_2015
170 Chen_2010 Comparison of reverse transcription loop-mediated isothermal amplification, conventional PCR and real-time PCR assays for Japanese encephalitis virus Chen, Zhiyong; Liao, Yuxue; Ke, Xuemei; Zhou, Jie; Chen, Yixiong; Gao, LuLu; Chen, Qing; Yu, Shouyi 2010 2010-11-30 PMC N PMC7089266 21116858.0 10.1007/s11033-010-0525-0 rujylmib 0.446808 Dinh_2011, Fan_Q_2012, Ren_X_2011, Chen_2008 Li_H_2019, Nemoto_2015, Zhang_2011
171 Shirato_2014 Detection of Middle East respiratory syndrome coronavirus using reverse transcription loop-mediated isothermal amplification (RT-LAMP) Shirato, Kazuya; Yano, Takuya; Senba, Syouhei; Akachi, Shigehiro; Kobayashi, Takashi; Nishinaka, Takamichi; Notomi, Tsugunori; Matsuyama, Shutoku 2014 2014-08-08 COMM-USE N PMC4132226 25103205.0 10.1186/1743-422x-11-139 6dvpqgf5 0.441999 Dinh_2011, Chen_2010 Shirato_2007, Nemoto_2015
172 Zhang_2019 Development and application of a multiplex PCR method for the simultaneous detection and differentiation of feline panleukopenia virus, feline bocavirus, and feline astrovirus Zhang, Qian; Niu, Jiangting; Yi, Shushuai; Dong, Guoying; Yu, Dejing; Guo, Yanbing; Huang, Hailong; Hu, Guixue 2019 2019-09-10 PMC N PMC7086731 31506786.0 10.1007/s00705-019-04394-8 rbp1u43t 0.441840 Dinh_2011, Pulford_2004, Falcone_1997 Stranieri_2017
173 Cardoso_2008 Validation of an Immunohistochemistry Assay to Detect Turkey Coronavirus: A Rapid and Simple Screening Tool for Limited Resource Settings Cardoso, T. C.; Castanheira, T. L. L.; Teixeira, M. C. B.; Rosa, A. C. G.; Hirata, K. Y.; Astolphi, R. D.; Luvizotto, M. C. R. 2008 2008-07-23 PMC N PMC7107114 18577614.0 10.3382/ps.2008-00042 iq2bjn3n 0.440484 Ha_S_2004, Vemulapalli_2009, Falcone_1997, Dinh_2011
174 Stefańska_2013 Application of three duplex real-time PCR assays for simultaneous detection of human seasonal and avian influenza viruses Stefańska, Ilona; Dzieciatkowski, Tomasz; Brydak, Lidia B.; Romanowska, Magdalena 2013 2013-03-21 PMC N PMC7086839 23515874.0 10.1007/s00705-013-1648-0 t847pji4 0.440313 Dinh_2011, Kang_2010 Kang_2010, Huang_2009
175 Mo_J_2020 Validation of specific quantitative real-time RT-PCR assay panel for Infectious Bronchitis using synthetic DNA standards and clinical specimens Mo, Jongseo; Angelichio, Michael; Gow, Lisa; Leathers, Valerie; Jackwood, Mark W. 2020 2020-02-29 PMC N PMC7113781 31712094.0 10.1016/j.jviromet.2019.113773 q9nkqg87 0.439076 Dinh_2011, Benson_2008, Lau_L_2003, Vemulapalli_2009, Wang_2018 Nemoto_2015, Gueudin_2003, Yuk_S_2016
176 Neeraja_2015 Rapid detection and differentiation of dengue virus serotypes by NS1 specific reverse transcription loop-mediated isothermal amplification (RT-LAMP) assay in patients presenting to a tertiary care hospital in Hyderabad, India Neeraja, M.; Lakshmi, V.; Lavanya, Vanjari; Priyanka, E.N.; Parida, M.M.; Dash, P.K.; Sharma, Shashi; Rao, P.V. Lakshmana; Reddy, Gopal 2015 2015-01-31 PMC N PMC7119600 25455901.0 10.1016/j.jviromet.2014.10.005 3lujp0oy 0.437932 Dinh_2011, Chen_2010, Ren_X_2011 Shirato_2007, Nemoto_2015
177 Zhao_2018 A lateral flow dipstick combined with reverse transcription recombinase polymerase amplification for rapid and visual detection of the bovine respirovirus 3 Zhao, Guimin; Wang, Hongmei; Hou, Peili; Xia, Xianzhu; He, Hongbin 2018 2018-10-31 PMC N PMC7126874 30138696.0 10.1016/j.mcp.2018.08.004 odhpuj3b 0.437604 Dinh_2011, Benson_2008, Chen_2010, Wang_2018, Li_H_2019 Nemoto_2015, Mu_Y_2014, Wang_2017, Malik_2013
178 Hirotsu_2020 Double-Quencher Probes Improved the Detection Sensitivity of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) by One-Step RT-PCR Yosuke Hirotsu; Hitoshi Mochizuki; Masao Omata 2020 2020-03-20 BioRxiv Y 10.1101/2020.03.17.20037903 2gokv7id 0.436628 Lau_L_2003, Chen_2016, Jiang_2004, Vemulapalli_2009, Dinh_2011 Keyaerts_2006, Nemoto_2015
179 Coudray-Meunier_2016 A Novel High-Throughput Method for Molecular Detection of Human Pathogenic Viruses Using a Nanofluidic Real-Time PCR System Coudray-Meunier, Coralie; Fraisse, Audrey; Martin-Latil, Sandra; Delannoy, Sabine; Fach, Patrick; Perelle, Sylvie 2016 2016-01-29 COMM-USE N PMC4732599 26824897.0 10.1371/journal.pone.0147832 7bjhobg7 0.435987 Dinh_2011, Benson_2008, Lau_L_2003, Vemulapalli_2009, Jiang_2004 Nemoto_2015, Mikel_2015
180 Li_C_2020 High sensitivity detection of coronavirus SARS-CoV-2 using multiplex PCR and a multiplex-PCR-based metagenomic method Chenyu Li; David N. Debruyne; Julia Spencer; Vidushi Kapoor; Lily Y. Liu; Bo Zhou; Lucie Lee; Rounak Feigelman; Grayson Burdon; Jeffrey Liu; Alejandra Oliva; Adam Borcherding; Hongdong Tan; Alexander E. Urban; Guoying Liu; Zhitong Liu 2020 2020-03-14 BioRxiv Y 10.1101/2020.03.12.988246 0hxan9rw 0.432247 Nemoto_2015, Malik_2013
181 Hosmillo_2010 Development of universal SYBR Green real-time RT-PCR for the rapid detection and quantitation of bovine and porcine toroviruses Hosmillo, Myra D.T.; Jeong, Young-Ju; Kim, Hyun-Jeong; Collantes, Therese Marie; Alfajaro, Mia Madel; Park, Jun-Gyu; Kim, Ha-Hyun; Kwon, Hyung-Jun; Park, Su-Jin; Kang, Mun-Il; Park, Sang-Ik; Cho, Kyoung-Oh 2010 2010-09-30 PMC N PMC7112831 20558206.0 10.1016/j.jviromet.2010.06.001 c9e93h0u 0.430612 Park_2009, Jiang_2004, Lau_L_2003, Hanaki_2014 Kumar_2010, Wang_2018, Nemoto_2015
182 Chen_2008 Reverse transcription loop-mediated isothermal amplification for the detection of highly pathogenic porcine reproductive and respiratory syndrome virus Chen, Hao-tai; Zhang, Jie; Sun, De-hui; Ma, Li-na; Liu, Xiang-tao; Quan, Kai; Liu, Yong-sheng 2008 2008-11-30 PMC N PMC7112790 18706931.0 10.1016/j.jviromet.2008.07.006 kylki373 0.429170 Dinh_2011, Lau_L_2003, Jiang_2004, Chen_2010 Nemoto_2015, Ren_X_2011, Shirato_2007, Hanaki_2013
183 Cha_Y_2013 Performance evaluation of ExiStation HBV diagnostic system for hepatitis B virus DNA quantitation Cha, Young Joo; Yoo, Soo Jin; Sohn, Yong-Hak; Kim, Hyun Soo 2013 2013-11-30 PMC N PMC7119692 23892129.0 10.1016/j.jviromet.2013.07.027 ad5tnawc 0.428894 Vemulapalli_2009, Wang_2018, Lau_L_2003
184 Elf_S_2018 Molecular Detection of Streptococcus pyogenes by Strand Invasion Based Amplification Assay Elf, Sonja; Olli, Jenni; Hirvonen, Sanna; Auvinen, Pauliina; Eboigbodin, Kevin E. 2018 2018-07-03 PMC N PMC7099210 29967988.0 10.1007/s40291-018-0346-8 43xf39gw 0.428864 Benson_2008, Dinh_2011, Vemulapalli_2009, Wang_2018 Reddy_2011
185 Liu_Q_2007 Microarray-in-a-Tube for Detection of Multiple Viruses Liu, Quanjun; Bai, Yunfei; Ge, Qinyu; Zhou, Shixin; Wen, Tian; Lu, Zuhong 2007 2007-02-01 PMC N PMC7108471 17158198.0 10.1373/clinchem.2006.071720 101lnq4f 0.428864 Dinh_2011, Wang_2018, Lau_L_2003 Li_J_2012
186 Hasan_2019 A novel real-time PCR assay panel for detection of common respiratory pathogens in a convenient, strip-tube array format Hasan, Mohammad Rubayet; Al Mana, Hassan; Young, Virginia; Tang, Patrick; Thomas, Eva; Tan, Rusung; Tilley, Peter 2019 2019-03-31 PMC N PMC7113679 30578898.0 10.1016/j.jviromet.2018.12.013 iy10z1kj 0.427129 Benson_2008, Wang_2018, Lau_L_2003, Jiang_2004, Nitsche_2004 Hasan_2018, Li_J_2013, Zhao_2019
187 Elf_S_2018 Development and evaluation of a rapid nucleic acid amplification method to detect influenza A and B viruses in human respiratory specimens Elf, Sonja; Auvinen, Pauliina; Jahn, Lisa; Liikonen, Karoliina; Sjöblom, Solveig; Saavalainen, Päivi; Mäki, Minna; Eboigbodin, Kevin E. 2018 2018-09-30 PMC N PMC7127616 29778563.0 10.1016/j.diagmicrobio.2018.04.006 6k73rf0g 0.426095 Dinh_2011, Benson_2008, Vemulapalli_2009, Wang_2018, Li_H_2019 Eboigbodin_2017
188 Hasan_2018 A novel real-time PCR assay panel for detection of common respiratory pathogens in a convenient, strip-tube array format Mohammad Rubayet Hasan; Hassan Al Mana; Virginia Young; Patrick Tang; Eva Thomas; Rusung Tan; Peter Tilley 2018 2018-10-29 BioRxiv N 10.1101/455568 aluuvve7 0.425347 Benson_2008, Wang_2018, Lau_L_2003, Jiang_2004, Vemulapalli_2009 Hasan_2019, Zhao_2019, Nemoto_2015
189 Huang_2005 Rapid and sensitive detection of multiple genes from the SARS‐Coronavirus using quantitative RT‐PCR with dual systems Huang, Jau‐Ling; Lin, Hui‐Tsu; Wang, Yu‐Ming; Yeh, Yi‐Chien; Peck, Konan; Lin, Bai‐Ling; Liu, Huan‐Wun; Chen, Ann; Lin, Chang‐Shen 2005 2005-08-24 PMC N PMC7166502 16121372.0 10.1002/jmv.20432 6rrs2qsq 0.424901 Lau_L_2003, Benson_2008, Wang_2018, Vemulapalli_2009, Nitsche_2004
190 Zhu_Z_2013 Development and Evaluation of a SYBR Green-Based Real Time RT-PCR Assay for Detection of the Emerging Avian Influenza A (H7N9) Virus Zhu, Zheng; Fan, Huan; Qi, Xian; Qi, Yuhua; Shi, Zhiyang; Wang, Hua; Cui, Lunbiao; Zhou, Minghao 2013 2013-11-20 COMM-USE N PMC3835827 24278234.0 10.1371/journal.pone.0080028 ajqkc91q 0.423887 Dinh_2011 Kumar_2010
191 Alfaro-Núñez_2014 Validation of a sensitive PCR assay for the detection of Chelonid fibropapilloma-associated herpesvirus in latent turtle infections Alfaro-Núñez, Alonzo; Gilbert, M. Thomas P. 2014 2014-09-15 None N PMC7119791 24882497.0 10.1016/j.jviromet.2014.05.019 exge1suy 0.420722 Benson_2008, Dinh_2011, Lee_W_2008
192 Houng_2004 Development and evaluation of an efficient 3′-noncoding region based SARS coronavirus (SARS-CoV) RT-PCR assay for detection of SARS-CoV infections Houng, Huo-Shu H; Norwood, David; Ludwig, George V; Sun, Wellington; Lin, Minta; Vaughn, David W 2004 2004-09-01 PMC N PMC7119649 15234807.0 10.1016/j.jviromet.2004.04.008 o9glkhyv 0.419841 Dinh_2011, Lau_L_2003, Emery_2004, Falcone_1997 Keyaerts_2006
193 Carr_2009 Development of a real-time RT-PCR for the detection of Swine-lineage Influenza A (H1N1) virus infections Carr, Michael J.; Gunson, Rory; Maclean, Alasdair; Coughlan, Suzie; Fitzgerald, Margaret; Scully, Mary; O’Herlihy, Brian; Ryan, John; O’Flanagan, Darina; Connell, Jeff; Carman, William F.; Hall, William W. 2009 2009-07-31 PMC N 19540799.0 10.1016/j.jcv.2009.06.001 px9h96wp 0.419618
194 Soltan_2016 Comparison of electron microscopy, ELISA, real time RT-PCR and insulated isothermal RT-PCR for the detection of Rotavirus group A (RVA) in feces of different animal species Soltan, Mohamed A.; Tsai, Yun-Long; Lee, Pei-Yu A.; Tsai, Chuan-Fu; Chang, Hsiao-Fen G.; Wang, Hwa-Tang T.; Wilkes, Rebecca P. 2016 2016-09-30 PMC N PMC7113751 27180038.0 10.1016/j.jviromet.2016.05.006 6lxc2rj2 0.419234 Dinh_2011, Benson_2008, Vemulapalli_2009, Wang_2018, Fan_Q_2012 Gueudin_2003, Decaro_2004
195 Wang_2014 Rapid and real-time detection of Porcine Sapelovirus by reverse transcription loop-mediated isothermal amplification assay Wang, Chunyan; Yu, Dayi; Cui, Li; Hua, Xiuguo; Yuan, Congli; Sun, Huan; Liu, Yuxiao 2014 2014-07-31 PMC N PMC7113659 24667302.0 10.1016/j.jviromet.2014.03.011 0ik6ems8 0.418464 Lau_L_2003, Chen_2008, Wang_2018, Jiang_2004, Dinh_2011 Nemoto_2015, Zhang_2011, Li_H_2019, Malik_2013
196 Dinh_2011 An Updated Loop-Mediated Isothermal Amplification Method for Rapid Diagnosis of H5N1 Avian Influenza Viruses Dinh, Duc Tuan; Le, Mai Thi Quynh; Vuong, Cuong Duc; Hasebe, Futoshi; Morita, Kouichi 2011 2011-03-24 PMC N PMC3153145 22028606.0 10.2149/tmh.2010-21 sdlls3ry 0.418030 Kang_2010, Chen_2010 Shirato_2007, Nemoto_2015, Stranieri_2017, Pyrc_2011
197 Broeders_2020 A new multiplex RT-qPCR method for the simultaneous detection and discrimination of Zika and chikungunya viruses Broeders, Sylvia; Garlant, Linda; Fraiture, Marie-Alice; Vandermassen, Els; Suin, Vanessa; Vanhomwegen, Jessica; Dupont-Rouzeyrol, Myrielle; Rousset, Dominique; Van Gucht, Steven; Roosens, Nancy 2020 2020-03-31 PMC N PMC7129992 31884173.0 10.1016/j.ijid.2019.12.028 2v6nxruk 0.416693 Dinh_2011 Zhang_2014, Kurosaki_2017, da_Silva_2019, Njiru_2008
198 Dedkov_2019 Development and Evaluation of a One-Step Quantitative RT-PCR Assay for Detection of Lassa Virus Dedkov, Vladimir G.; Magassouba, N.’Faly; Safonova, Marina V.; Naydenova, Ekaterina V.; Ayginin, Andrey A.; Soropogui, Barre; Kourouma, Fode; Camara, Amara B.; Camara, Jacob; Kritzkiy, Andrey A.; Tuchkov, Igor V.; Shchelkanov, Mikhail Yu.; Maleev, Victor V. 2019 2019-09-30 PMC N PMC7113850 31170468.0 10.1016/j.jviromet.2019.113674 iqwojhq2 0.416691 Hakhverdyan_2005
199 McClenahan_2009 A capsid gene-based real-time reverse transcription polymerase chain reaction assay for the detection of marine vesiviruses in the Caliciviridae McClenahan, Shasta D.; Bok, Karin; Neill, John D.; Smith, Alvin W.; Rhodes, Crystal R.; Sosnovtsev, Stanislav V.; Green, Kim Y.; Romero, Carlos H. 2009 2009-10-31 PMC N 19410604.0 10.1016/j.jviromet.2009.04.026 68du67lw 0.414374 Dinh_2011, Pulford_2004
200 Zhao_2019 A multiplex RT-PCR assay for rapid and simultaneous detection of four RNA viruses in swine Zhao, Yan; Liu, Feifei; Li, Qingmei; Wu, Mengfan; Lei, Lei; Pan, Zishu 2019 2019-07-31 PMC N PMC7113762 30951787.0 10.1016/j.jviromet.2019.04.001 l8s762ab 0.414018 Dinh_2011, Falcone_1997 Huang_2009
201 An_D_2008 An immunochromatography assay for rapid antemortem diagnosis of dogs suspected to have canine distemper An, Dong-Jun; Kim, Tae-Young; Song, Dae-Sub; Kang, Bo-Kyu; Park, Bong-Kyun 2008 2008-02-29 PMC N PMC7119767 17950910.0 10.1016/j.jviromet.2007.09.006 o4hsr4pm 0.413748 Fan_Q_2012, Benson_2008, Vemulapalli_2009, Dinh_2011, Lau_L_2003 Chen_2012
202 Kang_2012 Development of an ELISA-array for simultaneous detection of five encephalitis viruses Kang, Xiaoping; Li, Yuchang; Fan, Li; Lin, Fang; Wei, Jingjing; Zhu, Xiaolei; Hu, Yi; Li, Jing; Chang, Guohui; Zhu, Qingyu; Liu, Hong; Yang, Yinhui 2012 2012-02-27 COMM-USE N PMC3305475 22369052.0 10.1186/1743-422x-9-56 rya9w6sh 0.413736 Dinh_2011 Wang_2018
203 Moore_2017 Development of a Recombinase Polymerase Amplification Assay for Detection of Epidemic Human Noroviruses Moore, Matthew D.; Jaykus, Lee-Ann 2017 2017-01-09 COMM-USE N PMC5220337 28067278.0 10.1038/srep40244 03a6hq3t 0.411664 Dinh_2011, Benson_2008, Vemulapalli_2009, Wang_2018, Chen_2010 Malik_2013, Nemoto_2015, Ma_L_2018
204 Decaro_2010 Development and validation of a real-time PCR assay for specific and sensitive detection of canid herpesvirus 1 Decaro, Nicola; Amorisco, Francesca; Desario, Costantina; Lorusso, Eleonora; Camero, Michele; Bellacicco, Anna Lucia; Sciarretta, Rossana; Lucente, Maria Stella; Martella, Vito; Buonavoglia, Canio 2010 2010-10-31 PMC N PMC7112867 20674611.0 10.1016/j.jviromet.2010.07.021 dash9udv 0.411240 Vemulapalli_2009, Dinh_2011, Benson_2008, Falcone_1997 Reddy_2011, Decaro_2008, Nemoto_2015
205 Chui_2005 Comparison of 9 different PCR primers for the rapid detection of severe acute respiratory syndrome coronavirus using 2 RNA extraction methods Chui, Linda; Drebot, Michael; Andonov, Anton; Petrich, Astrid; Glushek, Martin; Mahony, James 2005 2005-09-30 PMC N PMC7125917 15994050.0 10.1016/j.diagmicrobio.2005.03.007 6h094fqh 0.409462 Lau_L_2003, Dinh_2011, Falcone_1997, Wang_2018, Jiang_2004 Gueudin_2003
206 Zheng_2019 A multiplex real-time PCR assay for the detection and differentiation of five bovine pinkeye pathogens Zheng, Wanglong; Porter, Elizabeth; Noll, Lance; Stoy, Colin; Lu, Nanyan; Wang, Yin; Liu, Xuming; Purvis, Tanya; Peddireddi, Lalitha; Lubbers, Brian; Hanzlicek, Gregg; Henningson, Jamie; Liu, Zongping; Bai, Jianfa 2019 2019-05-31 PMC N PMC7114150 30930057.0 10.1016/j.mimet.2019.03.024 97pvtq8e 0.408708
207 Zhang_2011 Rapid and sensitive detection of PRRSV by a reverse transcription-loop-mediated isothermal amplification assay Zhang, Lei; Liu, Ye-bing; Chen, Lei; Wang, Jian-huan; Ning, Yi-bao 2011 2011-08-17 PMC N PMC7091248 21847756.0 10.1007/s12250-011-3185-x vqss7z7m 0.408582 Dinh_2011, Chen_2008, Chen_2010, Fan_Q_2012, Ren_X_2011 Nemoto_2015, Malik_2013, Shirato_2007
208 Hu_S_2015 Development of reverse-transcription loop-mediated isothermal amplification assay for rapid detection and differentiation of dengue virus serotypes 1–4 Hu, Sheng-feng; Li, Miao; Zhong, Lan-lan; Lu, Shi-miao; Liu, Ze-xia; Pu, Jie-ying; Wen, Jin-sheng; Huang, Xi 2015 2015-11-14 COMM-USE N PMC4647581 26572227.0 10.1186/s12866-015-0595-1 btnwcf6q 0.407229 Dinh_2011, Chen_2010, Fan_Q_2012 Neeraja_2015, Zhang_2014
209 Zhou_2020 Development and evaluation of a rapid detection assay for severe fever with thrombocytopenia syndrome virus based on reverse-transcription recombinase polymerase amplification Zhou, Jingyu; Wang, Qiujing; Zhu, Lijun; Li, Shibo; Li, Wei; Fu, Yongfeng; Cheng, Xunjia 2020 2020-04-21 PMC N 10.1016/j.mcp.2020.101580 f9zmztef 0.407137 Lau_L_2003, Jiang_2004, Li_H_2019, Wang_2018, Dinh_2011
210 Butt_2020 Development of a dual-gene loop-mediated isothermal amplification (LAMP) detection assay for SARS-CoV-2: A preliminary study Azeem Mehmood Butt; Shafiqa Siddique; Xiaoping An; Yigang Tong 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.08.20056986 fc338qdt 0.406242 Dinh_2011, Jiang_2004, Lau_L_2003, Fan_Q_2012, Benson_2008 Kim_J_2019, Nemoto_2015, Keyaerts_2006
211 Xing_2016 Ultrasensitive Detection of Porcine Epidemic Diarrhea Virus from Fecal Samples Using Functionalized Nanoparticles Xing, Na; Guan, Xiaoxiao; An, Bin; Cui, Beibei; Wang, Zengguo; Wang, Xiaoya; Zhang, Xiujuan; Du, Qian; Zhao, Xiaomin; Huang, Yong; Tong, Dewen 2016 2016-12-09 COMM-USE N PMC5147876 27936019.0 10.1371/journal.pone.0167325 mkrpls2f 0.405360 Dinh_2011 Yuan_2015, Xu_F_2020
212 Briese_2005 Diagnostic System for Rapid and Sensitive Differential Detection of Pathogens Briese, Thomas; Palacios, Gustavo; Kokoris, Mark; Jabado, Omar; Liu, Zhiqiang; Renwick, Neil; Kapoor, Vishal; Casas, Inmaculada; Pozo, Francisco; Limberger, Ron; Perez-Brena, Pilar; Ju, Jingyue; Lipkin, W. Ian 2005 2005-02-23 PMC N PMC3320438 15752453.0 10.3201/eid1102.040492 jk983q4p 0.404360
213 Yan_C_2020 Rapid and visual detection of 2019 novel coronavirus (SARS-CoV-2) by a reverse transcription loop-mediated isothermal amplification assay Yan, Chao; Cui, Jinghua; Huang, Lei; Du, Bing; Chen, Lu; Xue, Guanhua; Li, Shaoli; Zhang, Weiwei; Zhao, Linqing; Sun, Yu; Yao, Hailan; Li, Nannan; Zhao, Hanqing; Feng, Yanling; Liu, Shiyu; Zhang, Qun; Liu, Di; Yuan, Jing 2020 2020-04-08 PMC Y 10.1016/j.cmi.2020.04.001 4m9p717r 0.404044 Zhang_2011, Wang_2018, Li_H_2019, Lau_L_2003, Thiel_2002 Nemoto_2015, Zhang_2014, Li_H_2019
214 Decaro_2004 Quantitation of canine coronavirus RNA in the faeces of dogs by TaqMan RT-PCR Decaro, Nicola; Pratelli, Annamaria; Campolo, Marco; Elia, Gabriella; Martella, Vito; Tempesta, Maria; Buonavoglia, Canio 2004 2004-08-31 PMC N PMC7119844 15158596.0 10.1016/j.jviromet.2004.03.012 t48y27wg 0.402653 Lau_L_2003, Wang_2018, Vemulapalli_2009, Jiang_2004, Borja_1992 Nemoto_2015, Dye_C_2008
215 Wang_2016 Reverse Transcription Cross-Priming Amplification–Nucleic Acid Test Strip for Rapid Detection of Porcine Epidemic Diarrhea Virus Wang, Feng-Xue; Yuan, Dan-Yi; Jin, Ya-Nan; Hu, Lin; Sun, Zhi-Yong; He, Qian; Zhao, Shi-Hua; Zhan, Shu-Bai; Wen, Yong-Jun 2016 2016-04-19 COMM-USE N PMC4835727 27090105.0 10.1038/srep24702 iq9xqe31 0.399541 Dinh_2011 Malik_2013, Wang_2018, Nemoto_2015
216 Wang_2009 A duplex real-time reverse transcriptase polymerase chain reaction assay for the detection of California serogroup and Cache Valley viruses Wang, Heng; Nattanmai, Seela; Kramer, Laura D.; Bernard, Kristen A.; Tavakoli, Norma P. 2009 2009-10-31 None N PMC2774246 19748425.0 10.1016/j.diagmicrobio.2009.07.001 ut7dlyh8 0.399445 Dinh_2011, Falcone_1997 Hull_2008, Malik_2013
217 Wang_2018 Establishment and optimization of a liquid bead array for the simultaneous detection of ten insect-borne pathogens Wang, Hui-yu; Wu, Shao-qiang; Jiang, Li; Xiao, Rong-hai; Li, Ting; Mei, Lin; Lv, Ji-zhou; Liu, Jia-jia; Lin, Xiang-mei; Han, Xue-qing 2018 2018-07-31 COMM-USE N PMC6069843 30064470.0 10.1186/s13071-018-2996-0 fzz8g3rq 0.399004 Wu_M_2018, Malik_2020, Rivera_2013
218 Chen_2010 Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues Chen, Hao-tai; Zhang, Jie; Ma, Yan-ping; Ma, Li-na; Ding, Yao-zhong; Liu, Xiang-tao; Cai, Xue-peng; Ma, Li-qing; Zhang, Yong-guang; Liu, Yong-sheng 2010 2010-04-30 PMC N PMC7126806 19835950.0 10.1016/j.mcp.2009.10.001 ytaro52p 0.397576 Ren_X_2011, Dinh_2011 Nemoto_2015, Chandrasekar_2015, Shirato_2007, Li_H_2019
219 Kim_Y_2015 A novel diagnostic approach to detecting porcine epidemic diarrhea virus: The lateral immunochromatography assay Kim, Yong Kwan; Lim, Seong-In; Cho, In-Soo; Cheong, Kwang-Myun; Lee, Eun-Jeong; Lee, Sang-Oh; Kim, Joon-Bae; Kim, Jung-Hwa; Jeong, Dong-Soo; An, Byung-Hyun; An, Dong-Jun 2015 2015-12-01 PMC N PMC7119843 26342906.0 10.1016/j.jviromet.2015.08.024 in5n7sed 0.393810 Dinh_2011, Benson_2008, Vemulapalli_2009, Fan_Q_2012, Emery_2004 An_D_2008, Xu_F_2020, Thuy_Tien_2018, Chen_2012
220 Huang_2015 Ultrasensitive Detection of RNA and DNA Viruses Simultaneously Using Duplex UNDP-PCR Assay Huang, Yong; Xing, Na; Wang, Zengguo; Zhang, Xiujuan; Zhao, Xiaomin; Du, Qian; Chang, Lingling; Tong, Dewen 2015 2015-11-06 COMM-USE N PMC4636378 26544710.0 10.1371/journal.pone.0141545 ceatyj3o 0.392825 Falcone_1997 Zambenedetti_2017, Schoenike_1999
221 Han_H_2019 Development of a SYBR green I-based duplex real-time fluorescence quantitative PCR assay for the simultaneous detection of porcine epidemic diarrhea virus and porcine circovirus 3 Han, Hao-Ying; Zheng, Hui-Hua; Zhao, Yu; Tian, Run-Bo; Xu, Peng-Li; Hou, Hua-Lin; Chen, Hong-Ying; Yang, Ming-Fan 2019 2019-04-30 PMC N 30735700.0 10.1016/j.mcp.2019.02.002 i9wsxth3 0.391335 Dinh_2011, Vemulapalli_2009, Fan_Q_2012, Chen_2010, Kang_2010
222 Ma_L_2019 Point‐of‐care diagnostic assay for rapid detection of porcine deltacoronavirus using the recombinase polymerase amplification method Ma, Lei; Zeng, Fanwen; Huang, Bihong; Zhu, Yujun; Wu, Miaoli; Xu, Fengjiao; Xiao, Li; Huang, Ren; Ma, Jingyun; Cong, Feng; Guo, Pengju 2019 2019-04-01 PMC N PMC7168525 30801935.0 10.1111/tbed.13155 6448pl9e 0.391335 Benson_2008, Vemulapalli_2009, Dinh_2011, Lau_L_2003, Li_H_2019
223 Balka_2009 Development of a one-step real-time quantitative PCR assay based on primer-probe energy transfer for the detection of porcine reproductive and respiratory syndrome virus Balka, Gyula; Hornyák, Ákos; Bálint, Ádám; Benyeda, Zsófia; Rusvai, Miklós 2009 2009-06-30 PMC N PMC7112897 19200443.0 10.1016/j.jviromet.2009.01.014 acndx5f9 0.390686 Dinh_2011 Zhang_2014, Cuevas-Romero_2013
224 Jiang_2020 Development and validation of a rapid single-step reverse transcriptase loop-mediated isothermal amplification (RT-LAMP) system potentially to be used for reliable and high-throughput screening of COVID-19 Minghua Jiang; Wenjie Fang; Amir Aratehfar; Xiaojing Li; Liyan ling; Hua Fang; Farnaz Farnaz Daneshnia; Jian Yu; Wanqing Liao; Hao Pei; Weihua Pan; Cornelia Lass-Florl 2020 2020-03-20 BioRxiv Y 10.1101/2020.03.15.20036376 eo2pcgix 0.390115 Dinh_2011, Benson_2008, Li_H_2019, Chen_2010, Erlandsson_2011 Nemoto_2015, Zhang_2014, Li_H_2019
225 Nagy_2010 Development and evaluation of a one-step real-time RT-PCR assay for universal detection of influenza A viruses from avian and mammal species Nagy, Alexander; Vostinakova, Veronika; Pirchanova, Zuzana; Cernikova, Lenka; Dirbakova, Zuzana; Mojzis, Miroslav; Jirincova, Helena; Havlickova, Martina; Dan, Adam; Ursu, Krisztina; Vilcek, Stefan; Hornickova, Jitka 2010 2010-03-13 PMC N PMC7086820 20229116.0 10.1007/s00705-010-0636-x 3bs2y2oe 0.389938 Dinh_2011 Choudhary_2013, Rodrigues_2011, Gueudin_2003
226 Dobhal_2019 Comparative genomics reveals signature regions used to develop a robust and sensitive multiplex TaqMan real-time qPCR assay to detect the genus Dickeya and Dickeya dianthicola Shefali Dobhal; Gamze Boluk; Brooke Babler; Michael J. Stulberg; John Rascoe; Mark Nakhla; Toni A. Chapman; Alex B. Crockford; Michael Melzer; Anne M. Alvarez; Mohammad Arif 2019 2019-11-20 BioRxiv N 10.1101/847590 lgeu4id0 0.388642 Enora_2019, Benson_2008 Njiru_2008, Dale_2016, Nemoto_2015
227 Yang_2016 Two Multiplex Real-Time PCR Assays to Detect and Differentiate Acinetobacter baumannii and Non- baumannii Acinetobacter spp. Carrying bla(NDM), bla(OXA-23-Like), bla(OXA-40-Like), bla(OXA-51-Like), and bla(OXA-58-Like) Genes Yang, Qiu; Rui, Yongyu 2016 2016-07-08 COMM-USE N PMC4938629 27391234.0 10.1371/journal.pone.0158958 qyb8er14 0.386698 Lau_L_2003, Jiang_2004, Benson_2008, Wang_2018 Li_P_2015, Njiru_2008
228 Wilkes_2014 Rapid and sensitive detection of canine distemper virus by one-tube reverse transcription-insulated isothermal polymerase chain reaction Wilkes, Rebecca P; Tsai, Yun-Long; Lee, Pei-Yu; Lee, Fu-Chun; Chang, Hsiao-Fen Grace; Wang, Hwa-Tang Thomas 2014 2014-09-09 COMM-USE N PMC4172905 25200113.0 10.1186/s12917-014-0213-8 fzi1ilpj 0.386308 Wang_2017, Liu_D_2015
229 Domanska‐Blicharz_2017 Specific detection of GII‐1 lineage of infectious bronchitis virus Domanska‐Blicharz, K.; Lisowska, A.; Pikuła, A.; Sajewicz‐Krukowska, J. 2017 2017-07-03 PMC N PMC7165721 28493279.0 10.1111/lam.12753 2rmtsyns 0.385702 Dinh_2011
230 MINAMI-FUKUDA_2013 Detection of Bovine Group A Rotavirus Using Rapid Antigen Detection Kits, RT-PCR and Next-Generation DNA Sequencing MINAMI-FUKUDA, Fujiko; NAGAI, Makoto; TAKAI, Hikaru; MURAKAMI, Toshiaki; OZAWA, Tadashi; TSUCHIAKA, Shinobu; OKAZAKI, Sachiko; KATAYAMA, Yukie; OBA, Mami; NISHIURA, Naomi; SASSA, Yukiko; OMATSU, Tsutomu; FURUYA, Tetsuya; KOYAMA, Satoshi; SHIRAI, Junsuke; TSUNEMITSU, Hiroshi; FUJII, Yoshiki; KATAYAMA, Kazuhiko; MIZUTANI, Tetsuya 2013 2013-08-02 NONCOMM N PMC3942952 23912876.0 10.1292/jvms.13-0265 vsjy9oaf 0.384249 Dinh_2011, Wang_2018, Vemulapalli_2009 Malik_2013, Decaro_2004
231 Zhang_2010 Oligonucleotide microarray with a minimal number of probes for the detection and identification of thirteen genera of plant viruses Zhang, Yongjiang; Yin, Jun; Li, Guifen; Li, Mingfu; Huang, Xin; Chen, Hongjun; Zhao, Wenjun; Zhu, Shuifang 2010 2010-07-31 PMC N PMC7112823 20304013.0 10.1016/j.jviromet.2010.03.010 j8fqan9x 0.381746 Giles_2015, Engel_2010
232 Geng_2017 Development of real-time recombinase polymerase amplification assay for rapid and sensitive detection of canine parvovirus 2 Geng, Yunyun; Wang, Jianchang; Liu, Libing; Lu, Yan; Tan, Ke; Chang, Yan-Zhong 2017 2017-11-06 COMM-USE N PMC5674863 29110666.0 10.1186/s12917-017-1232-z zs18ez5q 0.381670 Dinh_2011, Wang_2018, Vemulapalli_2009 Wang_2017, Nemoto_2015
233 Wang_2018 Evaluation of an incubation instrument-free reverse transcription recombinase polymerase amplification assay for rapid and point-of-need detection of canine distemper virus Wang, Jianchang; Wang, Jinfeng; Li, Ruiwen; Shi, Ruihan; Liu, Libing; Yuan, Wanzhe 2018 2018-10-31 PMC N PMC7113680 30009850.0 10.1016/j.jviromet.2018.07.007 itvhobbu 0.381102 Dinh_2011, Chen_2010, Lau_L_2003, Vemulapalli_2009, Wang_2018 Wang_2017, Zhang_2014, Nemoto_2015
234 Wu_M_2019 High-throughput Luminex xMAP assay for simultaneous detection of antibodies against rabbit hemorrhagic disease virus, Sendai virus and rabbit rotavirus Wu, Miaoli; Ma, Lei; Cong, Feng; Zhu, Yujun; Xu, Fengjiao; Lian, Yuexiao; Huang, Bihong; Xiao, Li; Chen, Meili; Zhang, Yu; Huang, Ren; Guo, Pengju 2019 2019-04-15 PMC N PMC7087182 30982935.0 10.1007/s00705-019-04226-9 ob9t82y5 0.380814 Benson_2008 Wu_M_2018
235 TSUCHIAKA_2015 Development of a novel detection system for microbes from bovine diarrhea by real-time PCR TSUCHIAKA, Shinobu; MASUDA, Tsuneyuki; SUGIMURA, Satoshi; KOBAYASHI, Suguru; KOMATSU, Natsumi; NAGAI, Makoto; OMATSU, Tsutomu; FURUYA, Tetsuya; OBA, Mami; KATAYAMA, Yukie; KANDA, Shuhei; YOKOYAMA, Tadashi; MIZUTANI, Tetsuya 2015 2015-11-30 NONCOMM N PMC4829504 26616156.0 10.1292/jvms.15-0552 9pau8skk 0.379392 Vemulapalli_2009, Falcone_1997, Benson_2008, Dinh_2011, Fan_Q_2012 Wu_M_2018, Hakhverdyan_2005
236 Naguib_2017 New real time and conventional RT-PCRs for updated molecular diagnosis of infectious bronchitis virus infection (IBV) in chickens in Egypt associated with frequent co-infections with avian influenza and Newcastle Disease viruses Naguib, Mahmoud M.; El-Kady, Magdy F.; Lüschow, Dörte; Hassan, Kareem E.; Arafa, Abdel-Satar; El-Zanaty, Ali; Hassan, Mohamed K.; Hafez, Hafez M.; Grund, Christian; Harder, Timm C. 2017 2017-07-31 PMC N PMC7113857 28336367.0 10.1016/j.jviromet.2017.02.018 k23engcx 0.378962 Dinh_2011, Falcone_1997
237 Wang_2018 A fast and simple one-step duplex PCR assay for canine distemper virus (CDV) and canine coronavirus (CCoV) detection Wang, Jing; Luo, Yakun; Liang, Lin; Li, Jinxiang; Cui, Shangjin 2018 2018-08-23 PMC N PMC7087121 30141131.0 10.1007/s00705-018-3982-8 q068aybo 0.378962 Lau_L_2003, Jiang_2004, Borja_1992, Zhang_2011 Wang_2017, Nemoto_2015
238 Haridas_2010 Optimisation of reverse transcriptase loop-mediated isothermal amplification assay for rapid detection of Macrobrachium rosenbergii noda virus and extra small virus in Macrobrachium rosenbergii Haridas, Divya V.; Pillai, Devika; Manojkumar, B.; Nair, C. Mohanakumaran; Sherief, P.M. 2010 2010-07-31 PMC N PMC7112818 20307575.0 10.1016/j.jviromet.2010.03.011 iih233tm 0.376283 Lau_L_2003, Chen_2008, Wang_2018, Thiel_2002 Zhang_2014, Nemoto_2015, Malik_2013, Stranieri_2017
239 Hourfar_2007 Blood Screening for Influenza Hourfar, Michael Kai; Themann, Anna; Eickmann, Markus; Puthavathana, Pilaipan; Laue, Thomas; Seifried, Erhard; Schmidt, Michael 2007 2007-07-23 PMC N PMC2878216 18214186.0 10.3201/eid1307.060861 oqwevkrb 0.374719
240 Kumar_2010 Development of a SYBR Green based real-time PCR assay for detection and quantitation of canine parvovirus in faecal samples Kumar, Manoj; Nandi, Sukdeb 2010 2010-10-31 PMC N PMC7119530 20599563.0 10.1016/j.jviromet.2010.06.007 xb2f0wdy 0.374113 Lau_L_2003, Vemulapalli_2009, Wang_2018, Falcone_1997 Decaro_2004, Cuevas-Romero_2013, Decaro_2008
241 Wang_2017 Recombinase Polymerase Amplification Assay—A Simple, Fast and Cost-Effective Alternative to Real Time PCR for Specific Detection of Feline Herpesvirus-1 Wang, Jianchang; Liu, Libing; Wang, Jinfeng; Sun, Xiaoxia; Yuan, Wanzhe 2017 2017-01-03 COMM-USE N PMC5207716 28045956.0 10.1371/journal.pone.0166903 lar2m59n 0.373728 Dinh_2011 Hohdatsu_1992, Liu_M_2018
242 Liu_N_2019 Establishment of a simultaneous detection method for ten duck viruses using MALDI-TOF mass spectrometry Liu, Ning; Wang, Lei; Cai, Gaozhe; Zhang, Dabing; Lin, Jianhan 2019 2019-11-30 PMC N PMC7113782 31430495.0 10.1016/j.jviromet.2019.113723 8ih7dqzq 0.372452 Zhang_2014, Wu_M_2018
243 Rutschke_2015 Hot start reverse transcriptase: an approach for improved real-time RT-PCR performance Rutschke, Nils; Zimmermann, Jan; Möller, Ronny; Klöck, Gerd; Winterhalter, Mathias; Leune, Annika 2015 2015-06-21 COMM-USE N PMC7099353 10.1186/s40543-015-0063-4 wlhmcdcn 0.370629 Thiel_2002, Lau_L_2003, Wang_2018, Jeong_2015, Zhang_2011 Nemoto_2015, Schoenike_1999, Li_H_2019
244 Inui_2019 A field‐deployable insulated isothermal RT‐PCR assay for identification of influenza A (H7N9) shows good performance in the laboratory Inui, Ken; Nguyen, Tung; Tseng, Hsin‐Jou; Tsai, ChuanFu Mark; Tsai, Yun‐Long; Chung, Simon; Padungtod, Pawin; Zhu, Huachen; Guan, Yi; Kalpravidh, Wantanee; Claes, Filip 2019 2019-09-05 COMM-USE N PMC6800302 31487118.0 10.1111/irv.12646 q2ilk6gs 0.369536
245 Yuk_S_2016 Comparison between dot-immunoblotting assay and clinical sign determination method for quantifying avian infectious bronchitis virus vaccine by titration in embryonated eggs Yuk, Seong-su; Kwon, Jung-Hoon; Noh, Jin-Yong; Hong, Woo-tack; Gwon, Gyeong-Bin; Jeong, Jei-Hyun; Jeong, Sol; Youn, Ha-Na; Heo, Yong-Hwan; Lee, Joong-Bok; Park, Seung-Yong; Choi, In-Soo; Song, Chang-Seon 2016 2016-04-30 PMC N PMC7119534 26802454.0 10.1016/j.jviromet.2016.01.008 ujabzic4 0.367977 Dinh_2011
246 Chen_2012 Development and evaluation of an immunochromatographic strip for rapid detection of porcine hemagglutinating encephalomyelitis virus Chen, Keyan; Zhao, Kui; Song, Deguang; He, Wenqi; Gao, Wei; Zhao, Chuanbo; Wang, Chengli; Gao, Feng 2012 2012-08-24 COMM-USE N PMC3508965 22920192.0 10.1186/1743-422x-9-172 u28y1ttw 0.366662 Vemulapalli_2009 Thuy_Tien_2018, An_D_2008, Wang_2019
247 Jiang_2013 Quantification of Hantaan Virus with a SYBR Green Ⅰ-Based One-Step qRT-PCR Assay Jiang, Wei; Yu, Hai-tao; Zhao, Ke; Zhang, Ye; Du, Hong; Wang, Ping-zhong; Bai, Xue-fan 2013 2013-11-21 COMM-USE N PMC3836762 24278449.0 10.1371/journal.pone.0081525 j5mo1hyk 0.364938 Vemulapalli_2009, Dinh_2011, Falcone_1997, Hull_2008, Borja_1992 Nemoto_2015, Keyaerts_2006
248 Ambagala_2016 Field‐Deployable Reverse Transcription‐Insulated Isothermal PCR (RT‐iiPCR) Assay for Rapid and Sensitive Detection of Foot‐and‐Mouth Disease Virus Ambagala, A.; Fisher, M.; Goolia, M.; Nfon, C.; Furukawa‐Stoffer, T.; Ortega Polo, R.; Lung, O. 2016 2016-09-03 PMC N PMC7169878 27589902.0 10.1111/tbed.12554 hp1iw7np 0.364148 Dinh_2011
249 Qin_J_2008 Studying copy number variations using a nanofluidic platform Qin, Jian; Jones, Robert C.; Ramakrishnan, Ramesh 2008 2008-08-18 NONCOMM N PMC2566873 18710881.0 10.1093/nar/gkn518 prsvv6l9 0.363667 Giles_2015, Berthet_2008
250 Wang_2018 Development of a sensitive and specific xMAP assay for detection of antibodies against infectious laryngotracheitis and bronchitis viruses Wang, Huanan; Cong, Feng; Guan, Jianchi; Xiao, Li; Zhu, Yujun; Lian, Yuexiao; Huang, Ren; Chen, Meili; Guo, Pengju 2018 2018-09-21 COMM-USE N PMC6151043 30241540.0 10.1186/s12985-018-1048-x eqqvwwh6 0.363000
251 Xiao_2014 Simultaneous Detection and Differentiation of Highly Virulent and Classical Chinese-Type Isolation of PRRSV by Real-Time RT-PCR Xiao, Shuqi; Chen, Yaosheng; Wang, Liangliang; Gao, Jintao; Mo, Delin; He, Zuyong; Liu, Xiaohong 2014 2014-06-12 COMM-USE N PMC4119655 25114934.0 10.1155/2014/809656 wf0vonkn 0.362798 Dinh_2011, Escutenaire_2006 Xiao_2008, Zhou_2018
252 Koo_B_2017 An isothermal, label-free, and rapid one-step RNA amplification/detection assay for diagnosis of respiratory viral infections Koo, Bonhan; Jin, Choong Eun; Lee, Tae Yoon; Lee, Jeong Hoon; Park, Mi Kyoung; Sung, Heungsup; Park, Se Yoon; Lee, Hyun Jung; Kim, Sun Mi; Kim, Ji Yeun; Kim, Sung-Han; Shin, Yong 2017 2017-04-15 PMC N PMC7127409 27894035.0 10.1016/j.bios.2016.11.051 9kb0b6rq 0.361752 Dinh_2011 Shirato_2007, Mu_Y_2014
253 James_2018 Ebolavirus diagnosis made simple, comparable and faster than molecular detection methods: preparing for the future James, Ameh S.; Todd, Shawn; Pollak, Nina M.; Marsh, Glenn A.; Macdonald, Joanne 2018 2018-04-23 COMM-USE N PMC5914028 29685158.0 10.1186/s12985-018-0985-8 p2qhnt4f 0.361567 Dinh_2011
254 Zhai_2004 Real-Time Polymerase Chain Reaction for Detecting SARS Coronavirus, Beijing, 2003 Zhai, Junhui; Briese, Thomas; Dai, Erhei; Wang, Xiaoyi; Pang, Xin; Du, Zongmin; Liu, Haihong; Wang, Jin; Wang, Hongxia; Guo, Zhaobiao; Chen, Zeliang; Jiang, Lingxiao; Zhou, Dongsheng; Han, Yanping; Jabado, Omar; Palacios, Gustavo; Lipkin, W. Ian; Yang, Ruifu 2004 2004-02-23 PMC N PMC3322935 15030701.0 10.3201/eid1002.030799 gk29idya 0.361325 Escutenaire_2006, Dinh_2011, Emery_2004 Emery_2004, Pyrc_2011, Vemulapalli_2015
255 Poon_2005 Detection of Human Influenza A Viruses by Loop-Mediated Isothermal Amplification Poon, Leo L. M.; Leung, Cynthia S. W.; Chan, Kwok H.; Lee, Jack H. C.; Yuen, Kwok Y.; Guan, Yi; Peiris, Joseph S. M. 2005 2005-01-01 None N PMC540134 15635005.0 10.1128/jcm.43.1.427-430.2005 b471h2u9 0.361325 Dinh_2011, Wang_2018, Li_H_2019, Fan_Q_2012 Pyrc_2011, Dinh_2011, Shirato_2007, Malik_2013
256 Hu_H_2018 Development of a one-step RT-PCR assay for detection of pancoronaviruses (α-, β-, γ-, and δ-coronaviruses) using newly designed degenerate primers for porcine and avian `fecal samples Hu, Hui; Jung, Kwonil; Wang, Qiuhong; Saif, Linda J.; Vlasova, Anastasia N. 2018 2018-06-30 PMC N PMC7113874 29499225.0 10.1016/j.jviromet.2018.02.021 xnp3ytp1 0.359842 Dinh_2011, Falcone_1997, Vemulapalli_2009 Zhou_2018
257 Nakauchi_2011 Rapid discrimination of oseltamivir‐resistant 275Y and ‐susceptible 275H substitutions in the neuraminidase gene of pandemic influenza A/H1N1 2009 virus by duplex one‐step RT‐PCR assay Nakauchi, Mina; Ujike, Makoto; Obuchi, Masatsugu; Takashita, Emi; Takayama, Ikuyo; Ejima, Miho; Oba, Kunihiro; Konomi, Nami; Odagiri, Takato; Tashiro, Masato; Kageyama, Tsutomu 2011 2011-05-12 PMC N PMC7167129 21567417.0 10.1002/jmv.22101 qa58kts6 0.359546
258 Hornyák_2012 Detection of subgenomic mRNA of feline coronavirus by real-time polymerase chain reaction based on primer-probe energy transfer (P-sg-QPCR) Hornyák, Ákos; Bálint, Ádám; Farsang, Attila; Balka, Gyula; Hakhverdyan, Mikhayil; Rasmussen, Thomas Bruun; Blomberg, Jonas; Belák, Sándor 2012 2012-05-31 PMC N PMC7112857 22349594.0 10.1016/j.jviromet.2012.01.022 fvq8hezk 0.359276 Stranieri_2017
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