Topic 12 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 21 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Lung_2013 Microarray for Identification of the Chiropteran Host Species of Rabies Virus in Canada Lung, Oliver; Nadin-Davis, Susan; Fisher, Mathew; Erickson, Anthony; Knowles, M. Kimberly; Furukawa-Stoffer, Tara; Ambagala, Aruna 2013 2013-05-31 COMM-USE N PMC5003475 27605186.0 10.3390/microarrays2020153 tquokpxk 0.669039
2 Garcia_2005 Scalable Transcriptional Analysis Routine—Multiplexed Quantitative Real-Time Polymerase Chain Reaction Platform for Gene Expression Analysis and Molecular Diagnostics Garcia, Elizabeth P.; Dowding, Lori A.; Stanton, Lawrence W.; Slepnev, Vladimir I. 2005 2005-10-31 PMC N 16237214.0 10.1016/s1525-1578(10)60575-2 qhftb6d7 0.657585 Garcia_2005, Nitsche_2004, Wang_2018, Lau_L_2003 Garcia_2005, Schoenike_1999, Workenhe_2008
3 Garcia_2005 Scalable Transcriptional Analysis Routine—Multiplexed Quantitative Real-Time Polymerase Chain Reaction Platform for Gene Expression Analysis and Molecular Diagnostics Garcia, Elizabeth P.; Dowding, Lori A.; Stanton, Lawrence W.; Slepnev, Vladimir I. 2005 2005-10-23 PMC N PMC1888488 16237214.0 qhftb6d7 0.637257 Garcia_2005, Nitsche_2004, Wang_2018, Lau_L_2003 Garcia_2005, Schoenike_1999, Workenhe_2008
4 Bhadra_2018 Direct nucleic acid analysis of mosquitoes for high fidelity species identification and detection of Wolbachia using a cellphone Bhadra, Sanchita; Riedel, Timothy E.; Saldaña, Miguel A.; Hegde, Shivanand; Pederson, Nicole; Hughes, Grant L.; Ellington, Andrew D. 2018 2018-08-30 COMM-USE N PMC6116922 30161131.0 10.1371/journal.pntd.0006671 xzoizser 0.592401 Bhadra_2018, Njiru_2008, Zhang_2014
5 Bannister_2018 Development and Assessment of a Diagnostic DNA Oligonucleotide Microarray for Detection and Typing of Meningitis-Associated Bacterial Species Bannister, Stephanie A.; Kidd, Stephen P.; Kirby, Elizabeth; Shah, Sonal; Thomas, Anvy; Vipond, Richard; Elmore, Michael J.; Telfer Brunton, Andrew; Marsh, Peter; Green, Steve; Silman, Nigel J.; Kempsell, Karen E. 2018 2018-10-16 COMM-USE N PMC6306750 30332776.0 10.3390/ht7040032 tekezab8 0.574905 Benson_2008, Erlandsson_2011 Shin_2011
6 Horiuchi_2020 A novel loop-mediated isothermal amplification method for efficient and robust detection of EGFR mutations Horiuchi, Sho; Saito, Yuichi; Matsui, Atsuka; Takahashi, Nobumasa; Ikeya, Tomohiko; Hoshi, Eishin; Shimizu, Yoshihiko; Yasuda, Masanori 2020 2020-01-14 NONCOMM N PMC7010225 32124949.0 10.3892/ijo.2020.4961 4sltubqk 0.570290 Dinh_2011, Benson_2008 Reddy_2011, Nemoto_2015
7 Qin_J_2008 Studying copy number variations using a nanofluidic platform Qin, Jian; Jones, Robert C.; Ramakrishnan, Ramesh 2008 2008-08-18 NONCOMM N PMC2566873 18710881.0 10.1093/nar/gkn518 prsvv6l9 0.561811 Giles_2015, Berthet_2008
8 Bhadra_2018 Direct nucleic acid analysis of mosquitoes for high fidelity species identification and detection of Wolbachia using a cellphone Sanchita Bhadra; Timothy E. Riedel; Miguel A. Saldaña; Shivanand Hegde; Nicole Pederson; Grant L. Hughes; Andrew D. Ellington 2018 2018-03-29 BioRxiv N 10.1101/291849 dbd2ndxa 0.557206 Dinh_2011 Bhadra_2018, Njiru_2008, Zhang_2014, Rivera_2013
9 Li_J_2007 s-RT-MELT for rapid mutation scanning using enzymatic selection and real time DNA-melting: new potential for multiplex genetic analysis Li, Jin; Berbeco, Ross; Distel, Robert J.; Jänne, Pasi A.; Wang, Lilin; Makrigiorgos, G. Mike 2007 2007-06-01 NONCOMM N PMC1919510 17545195.0 10.1093/nar/gkm403 lz37rh82 0.547743 Chen_2018, Wu_L_2010 Moser_2012, Horiuchi_2020
10 Pan_Y_2006 Differentially profiling the low-expression transcriptomes of human hepatoma using a novel SSH/microarray approach Pan, Yi-Shin; Lee, Yun-Shien; Lee, Yung-Lin; Lee, Wei-Chen; Hsieh, Sen-Yung 2006 2006-05-31 COMM-USE N PMC1522022 16737534.0 10.1186/1471-2164-7-131 9r62ffew 0.535166
11 Liu_Q_2005 Detection and analysis system for hybridization images of lab-in-a-tube microarray Liu, Quanjun; Zhou, Qin; Bai, Yunfei; Ge, Qinyu; Lu, Zuhong 2005 2005-01-01 PMC N PMC7088752 10.1360/982005-451 bssazy93 0.502434 Jiang_2011, Liu_H_2006, Wu_L_2010, Yang_2008 Nakamura_2011, Yeung_2006, Liu_Q_2007, Hsieh_2013
12 Liu_Q_2007 Microarray-in-a-Tube for Detection of Multiple Viruses Liu, Quanjun; Bai, Yunfei; Ge, Qinyu; Zhou, Shixin; Wen, Tian; Lu, Zuhong 2007 2007-02-01 PMC N PMC7108471 17158198.0 10.1373/clinchem.2006.071720 101lnq4f 0.471823 Dinh_2011, Wang_2018, Lau_L_2003 Li_J_2012
13 Wu_L_2010 Detection of HIV cDNA Point Mutations with Rolling-Circle Amplification Arrays Wu, Lingwei; Liu, Quanjun; Wu, Zhongwei; Lu, Zuhong 2010 2010-01-27 COMM-USE N PMC6256933 20335932.0 10.3390/molecules15020619 2dwjb964 0.451448 Jiang_2011, Liu_H_2006, Lee_J_2019 Kutyavin_2006
14 Nagy_2017 Evaluation of TaqMan qPCR System Integrating Two Identically Labelled Hydrolysis Probes in Single Assay Nagy, Alexander; Vitásková, Eliška; Černíková, Lenka; Křivda, Vlastimil; Jiřincová, Helena; Sedlák, Kamil; Horníčková, Jitka; Havlíčková, Martina 2017 2017-01-25 COMM-USE N PMC5264587 28120891.0 10.1038/srep41392 mne96c9i 0.451159 Jiang_2011, Liu_H_2006, Lee_W_2008 Nemoto_2015, Bhadra_2020, Decaro_2004
15 Bhadra_2018 Multiplex logic processing isothermal diagnostic assays for an evolving virus Sanchita Bhadra; Miguel A. Saldaña; Hannah Grace Han; Grant L. Hughes; Andrew D. Ellington 2018 2018-09-23 BioRxiv N 10.1101/424440 n5liudlg 0.446451 Lee_W_2008, Dinh_2011 Bhadra_2018, da_Silva_2019, Li_J_2012, Nemoto_2015
16 Li_C_2007 Construction of a multiplex allele‐specific PCR‐based universal array (ASPUA) and its application to hearing loss screening Li, Cai‐Xia; Pan, Qian; Guo, Yong‐Gang; Li, Yan; Gao, Hua‐Fang; Zhang, Di; Hu, Hao; Xing, Wan‐Li; Mitchelson, Keith; Xia, Kun; Dai, Pu; Cheng, Jing 2007 2007-12-27 PMC N PMC7165727 18161878.0 10.1002/humu.20622 3v7se14x 0.445260
17 Pulford_2004 Amplification refractory mutation system PCR assays for the detection of variola and Orthopoxvirus Pulford, David; Meyer, Hermann; Brightwell, Gale; Damon, Inger; Kline, Richard; Ulaeto, David 2004 2004-04-30 PMC N PMC7119807 15019263.0 10.1016/j.jviromet.2004.01.001 zarq507s 0.443671
18 Lu_Q_2008 A sensitive array-based assay for identifying multiple TMPRSS2:ERG fusion gene variants Lu, Qing; Nunez, Esperanza; Lin, Chunrun; Christensen, Kimberly; Downs, Tracy; Carson, Dennis A.; Wang-Rodriguez, Jessica; Liu, Yu-Tsueng 2008 2008-09-15 NONCOMM N PMC2582611 18794177.0 10.1093/nar/gkn585 nv228vte 0.423026 Horiuchi_2020
19 Bhadra_2018 Simultaneous Detection of Different Zika Virus Lineages via Molecular Computation in a Point-of-Care Assay Bhadra, Sanchita; Saldaña, Miguel A.; Han, Hannah Grace; Hughes, Grant L.; Ellington, Andrew D. 2018 2018-12-14 COMM-USE N PMC6316447 30558136.0 10.3390/v10120714 srxo19hg 0.403723 Lee_W_2008 da_Silva_2019, Bhadra_2018, Kurosaki_2017
20 Chen_2016 Development of a bead-based suspension array for the detection of pathogens in acute respiratory tract infections Chen, Yu-Sheng; Li, Hong-Ru; Zhang, Wei; Hua, Zhi-Dan; Lin, Xiao-Hong; Lin, Meng-Qing; Huang, Wen-Sen; Huang, Li-Ping; Yu, Xiao-Li; Xu, Neng-Luan; Lin, Ming; Xie, Bao-Song; Shen, Xiao-Na; Xie, Jian-Feng; Wang, Yi; Huang, Meng; Wu, Yan-An; Hu, Xin-Lan 2016 2016-07-24 PMC N PMC4994910 27190247.0 10.1177/1535370216647128 5qx6w7dl 0.394774 Benson_2008, Liu_H_2006, Lau_L_2003, Vemulapalli_2009 Riahi_2011, Wang_2018, Wu_M_2018, Goodman_2016
21 Tan_J_2011 An optimized microarray platform for assaying genomic variation in Plasmodium falciparum field populations Tan, John C; Miller, Becky A; Tan, Asako; Patel, Jigar J; Cheeseman, Ian H; Anderson, Tim JC; Manske, Magnus; Maslen, Gareth; Kwiatkowski, Dominic P; Ferdig, Michael T 2011 2011-04-08 COMM-USE N PMC3218861 21477297.0 10.1186/gb-2011-12-4-r35 d3jqgj9k 0.393436 Giles_2015, Wong_2007
22 Black_2002 A rapid RT-PCR method to differentiate six established genotypes of rabies and rabies-related viruses using TaqMan™ technology Black, Elizabeth M; Lowings, J.Paul; Smith, Jemma; Heaton, Paul R; McElhinney, Lorraine M 2002 2002-08-31 PMC N PMC7119615 12176139.0 10.1016/s0166-0934(02)00062-9 muskjaw3 0.392841 Dinh_2011, Falcone_1997, Pulford_2004
23 Long_2004 A universal microarray for detection of SARS coronavirus Long, Wei-Hong; Xiao, Hua-Sheng; Gu, Xiao-Mei; Zhang, Qing-Hua; Yang, Hong-Jun; Zhao, Guo-Ping; Liu, Jian-Hua 2004 2004-10-31 PMC N PMC7112900 15350733.0 10.1016/j.jviromet.2004.06.016 n7zeshh3 0.358716
24 Coudray-Meunier_2016 A Novel High-Throughput Method for Molecular Detection of Human Pathogenic Viruses Using a Nanofluidic Real-Time PCR System Coudray-Meunier, Coralie; Fraisse, Audrey; Martin-Latil, Sandra; Delannoy, Sabine; Fach, Patrick; Perelle, Sylvie 2016 2016-01-29 COMM-USE N PMC4732599 26824897.0 10.1371/journal.pone.0147832 7bjhobg7 0.357778 Dinh_2011, Benson_2008, Lau_L_2003, Vemulapalli_2009, Jiang_2004 Nemoto_2015, Mikel_2015
25 Najafzadeh_2018 Rapid Identification of Seven Waterborne Exophiala Species by RCA DNA Padlock Probes Najafzadeh, M. J.; Vicente, V. A.; Feng, Peiying; Naseri, A.; Sun, Jiufeng; Rezaei-Matehkolaei, A.; de Hoog, G. S. 2018 2018-03-05 COMM-USE N PMC6096892 29504057.0 10.1007/s11046-018-0256-7 3wvuudhd 0.349959 Enora_2019
26 Chen_2011 Detection and Identification of Common Food-Borne Viruses with a Tiling Microarray Chen, Haifeng; Mammel, Mark; Kulka, Mike; Patel, Isha; Jackson, Scott; Goswami, Biswendu B. 2011 2011-05-16 NONCOMM N PMC3109525 21660190.0 10.2174/1874357901105010052 ycs5rtoc 0.345025 Giles_2015, Engel_2010
27 Yoshimura_2015 Controlled Microwave Heating Accelerates Rolling Circle Amplification Yoshimura, Takeo; Suzuki, Takamasa; Mineki, Shigeru; Ohuchi, Shokichi 2015 2015-09-08 COMM-USE N PMC4562646 26348227.0 10.1371/journal.pone.0136532 yvd1n42f 0.342179 Jiang_2011, Liu_H_2006, Thiel_2002 Goo_N_2016, Moser_2012, Mori_2006
28 Goo_N_2016 Rolling circle amplification as isothermal gene amplification in molecular diagnostics Goo, Nam-In; Kim, Dong-Eun 2016 2016-07-29 PMC N PMC7096790 10.1007/s13206-016-0402-6 yir5dia8 0.325094 Wu_L_2010, Thiel_1997, Wang_2018 Wu_L_2010, Fallahi_2015, Kersting_2014, Moser_2012
29 Zhang_2005 Sensitive Detection of SARS Coronavirus RNA by a Novel Asymmetric Multiplex Nested RT-PCR Amplification Coupled With Oligonucleotide Microarray Hybridization Zhang, Zhi-wei; Zhou, Yi-ming; Zhang, Yan; Guo, Yong; Tao, Sheng-ce; Li, Ze; Zhang, Qiong; Cheng, Jing 2005 2005-01-01 PMC N PMC7122606 16156097.0 10.1385/1-59259-923-0:59 e4x8gkd8 0.314022 Lau_L_2003, Wang_2018, Jiang_2004, Liu_H_2006, Benson_2008 Nemoto_2015
30 Bhadra_2020 High-surety isothermal amplification and detection of SARS-CoV-2, including with crude enzymes Sanchita Bhadra; Timothy E Riedel; Simren Lakhotia; Nicholas D Tran; Andrew D Ellington 2020 2020-04-14 BioRxiv Y 10.1101/2020.04.13.039941 ezv6xp16 0.310712 Wang_2018, Lee_W_2008, Wu_L_2010 Nemoto_2015, da_Silva_2019
31 Giles_2015 Development of a DNA-based microarray for the detection of zoonotic pathogens in rodent species Giles, Timothy; Yon, Lisa; Hannant, Duncan; Barrow, Paul; Abu-Median, Abu-Bakr 2015 2015-12-31 PMC N PMC7127396 26188129.0 10.1016/j.mcp.2015.07.005 xo1cyzrg 0.307193 Li_J_2012