Topic 14 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 21 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Cornelissen_2017 Mycoplasma detection by triplex real-time PCR in bronchoalveolar lavage fluid from bovine respiratory disease complex cases Cornelissen, Jan B. W. J.; de Bree, Freddy M.; van der Wal, Fimme J.; Kooi, Engbert A.; Koene, Miriam G. J.; Bossers, Alex; Smid, Bregtje; Antonis, Adriaan F.; Wisselink, Henk J. 2017 2017-04-08 COMM-USE N PMC5385097 28390431.0 10.1186/s12917-017-1023-6 a0r4xh1c 0.685088 Gueudin_2003
2 Enora_2019 Novel tetraplex qPCR assays for simultaneous detection and identification of Xylella fastidiosa subspecies in plant tissues Dupas Enora; Briand Martial; Jacques Marie-Agnès; Cesbron Sophie 2019 2019-07-11 BioRxiv N 10.1101/699371 65qpcsiq 0.625919 Najafzadeh_2018
3 Bergallo_2016 Development of a degenerated TaqMan real‐time Q‐PCR for detection of bacteria‐free DNA in dialysis fluid Bergallo, Massimiliano; Loiacono, Elisa; Rizzo, Giovanna; Caiazzo, Marialuisa; Palladino, Giuseppe; Amore, Alessandro 2016 2016-12-15 PMC N PMC7161787 27067406.0 10.1002/bab.1498 suq8e7s7 0.584309 Hofmann_1993
4 Bai_J_2018 Comparison data of a two-target real-time PCR assay with and without an internal control in detecting Salmonella enterica from cattle lymph nodes Bai, Jianfa; Trinetta, Valentina; Shi, Xiaorong; Noll, Lance W.; Magossi, Gabriela; Zheng, Wanglong; Porter, Elizabeth P.; Cernicchiaro, Natalia; Renter, David G.; Nagaraja, Tiruvoor G. 2018 2018-04-22 COMM-USE N PMC5998743 29904683.0 10.1016/j.dib.2018.04.051 3ejfxj6r 0.540429 Thiel_2002, Borja_1992, Wang_2018 Decaro_2004, Vemulapalli_2009, Nemoto_2015
5 Zheng_2019 A multiplex real-time PCR assay for the detection and differentiation of five bovine pinkeye pathogens Zheng, Wanglong; Porter, Elizabeth; Noll, Lance; Stoy, Colin; Lu, Nanyan; Wang, Yin; Liu, Xuming; Purvis, Tanya; Peddireddi, Lalitha; Lubbers, Brian; Hanzlicek, Gregg; Henningson, Jamie; Liu, Zongping; Bai, Jianfa 2019 2019-05-31 PMC N PMC7114150 30930057.0 10.1016/j.mimet.2019.03.024 97pvtq8e 0.535132
6 Yang_2010 Dual detection of Legionella pneumophila and Legionella species by real-time PCR targeting the 23S-5S rRNA gene spacer region Yang, G.; Benson, R.; Pelish, T.; Brown, E.; Winchell, J.M.; Fields, B. 2010 2010-03-31 PMC N PMC7129662 19438641.0 10.1111/j.1469-0691.2009.02766.x vqu4qhu7 0.524504 Dinh_2011, Benson_2008 Gueudin_2003
7 Xiu_L_2019 Simultaneous detection of eleven sexually transmitted agents using multiplexed PCR coupled with MALDI-TOF analysis Xiu, Leshan; Zhang, Chi; Li, Yamei; Wang, Feng; Peng, Junping 2019 2019-08-28 NONCOMM N PMC6717854 31695443.0 10.2147/idr.s219580 in7he5o4 0.496470 Lee_G_2013, Dinh_2011
8 Thiessen_2018 Development of a quantitative loop-mediated isothermal amplification assay for the field detection of Erysiphe necator Thiessen, Lindsey D.; Neill, Tara M.; Mahaffee, Walter F. 2018 2018-04-20 COMM-USE N PMC5912203 29692952.0 10.7717/peerj.4639 zwvesrct 0.495108 Benson_2008, Wang_2018, Borja_1992, Li_H_2019 Zhang_2014, Rivera_2013, Nemoto_2015
9 Dupas_2019 Comparison of real-time PCR and droplet digital PCR for the detection of Xylella fastidiosa in plants Enora Dupas; Bruno Legendre; Valérie Olivier; Françoise Poliakoff; Charles Manceau; Amandine Cunty 2019 2019-03-20 BioRxiv N 10.1101/582288 0xc02kkb 0.491513 Benson_2008, Wang_2018, Thiel_2002, Borja_1992 Rodrigues_2011, Nemoto_2015
10 Cruz-Flores_2019 Multiplex SYBR Green and duplex TaqMan real-time PCR assays for the detection of Photorhabdus Insect-Related (Pir) toxin genes pirA and pirB Cruz-Flores, Roberto; Mai, Hung Nam; Dhar, Arun K. 2019 2019-02-28 PMC N PMC7127373 30576786.0 10.1016/j.mcp.2018.12.004 32hlvdku 0.488259 Benson_2008, Thiel_2002, Vemulapalli_2009, Nitsche_2004 Njiru_2008, Gumaa_2019, Zhang_2014
11 Yang_2016 Two Multiplex Real-Time PCR Assays to Detect and Differentiate Acinetobacter baumannii and Non- baumannii Acinetobacter spp. Carrying bla(NDM), bla(OXA-23-Like), bla(OXA-40-Like), bla(OXA-51-Like), and bla(OXA-58-Like) Genes Yang, Qiu; Rui, Yongyu 2016 2016-07-08 COMM-USE N PMC4938629 27391234.0 10.1371/journal.pone.0158958 qyb8er14 0.482578 Lau_L_2003, Jiang_2004, Benson_2008, Wang_2018 Li_P_2015, Njiru_2008
12 Li_P_2015 Rapid detection of Acinetobacter baumannii and molecular epidemiology of carbapenem-resistant A. baumannii in two comprehensive hospitals of Beijing, China Li, Puyuan; Niu, Wenkai; Li, Huan; Lei, Hong; Liu, Wei; Zhao, Xiangna; Guo, Leijing; Zou, Dayang; Yuan, Xin; Liu, Huiying; Yuan, Jing; Bai, Changqing 2015 2015-09-23 COMM-USE N PMC4585070 26441924.0 10.3389/fmicb.2015.00997 txezrbv5 0.419925 Mukai_2006
13 Dobhal_2019 Comparative genomics reveals signature regions used to develop a robust and sensitive multiplex TaqMan real-time qPCR assay to detect the genus Dickeya and Dickeya dianthicola Shefali Dobhal; Gamze Boluk; Brooke Babler; Michael J. Stulberg; John Rascoe; Mark Nakhla; Toni A. Chapman; Alex B. Crockford; Michael Melzer; Anne M. Alvarez; Mohammad Arif 2019 2019-11-20 BioRxiv N 10.1101/847590 lgeu4id0 0.384870 Enora_2019, Benson_2008 Njiru_2008, Dale_2016, Nemoto_2015
14 Lee_G_2013 A comparison of oligonucleotide-based microarray and real-time PCR for the detection of sexually transmitted infections Lee, Gyeong-In; Yoen, Jong Pil; Kang, Jin Seok; Hwang, Seung Yong; Hong, Yu-Min; Yang, Jeong-Ha; Yoon, Hyun Kyu 2013 2013-03-20 PMC N PMC7096812 10.1007/s13206-013-7111-1 78du7c1s 0.375750 Dinh_2011 Li_J_2012, Giles_2015, Fallahi_2015
15 Wang_2019 Development and evaluation of recombinase-aided amplification assays incorporating competitive internal controls for detection of human adenovirus serotypes 3 and 7 Wang, Rui-huan; Zhang, Hong; Zhang, Yi; Li, Xin-na; Shen, Xin-xin; Qi, Ju-ju; Fan, Guo-hao; Xiang, Xing-yu; Zhan, Zhi-fei; Chen, Zi-wei; Ma, Xue-jun 2019 2019-07-01 COMM-USE N PMC6604330 31262315.0 10.1186/s12985-019-1178-9 kt5f672s 0.357833 Dinh_2011, Kang_2010, Jiang_2004, Lau_L_2003, Chen_2010 Moore_2017, Reddy_2011, Ma_L_2018
16 Reddy_2011 Loop-mediated isothermal amplification assay for the diagnosis of retinitis caused by herpes simplex virus-1 Reddy, A.K.; Balne, P.K.; Reddy, R.K.; Mathai, A.; Kaur, I. 2011 2011-02-28 PMC N PMC7128213 20298270.0 10.1111/j.1469-0691.2010.03216.x zvrfqkol 0.355994 Dinh_2011, Chen_2010, Falcone_1997 Shirato_2007
17 Hull_2008 A duplex real-time reverse transcriptase polymerase chain reaction assay for the detection of St. Louis encephalitis and eastern equine encephalitis viruses Hull, Rene; Nattanmai, Seela; Kramer, Laura D.; Bernard, Kristen A.; Tavakoli, Norma P. 2008 2008-11-30 None N PMC2615585 18715737.0 10.1016/j.diagmicrobio.2008.07.004 xwqd50mu 0.348735 Dinh_2011 Wang_2009
18 Oyhenart_2013 Loop mediated isothermal amplification of 5.8S rDNA for specific detection of Tritrichomonas foetus Oyhenart, Jorge; Martínez, Florencia; Ramírez, Rosana; Fort, Marcelo; Breccia, Javier D. 2013 2013-03-31 PMC N PMC7116945 23265811.0 10.1016/j.vetpar.2012.11.034 enof432p 0.341731 Fallahi_2015, Benson_2008 Njiru_2008, Stranieri_2017, Rivera_2013
19 Dale_2016 Enhancement of wildlife disease surveillance using multiplex quantitative PCR: development of qPCR assays for major pathogens in UK squirrel populations Dale, Timothy D.; Watts, Phillip C.; Jones, David; Pounder, Kieran; Everest, David J.; Begon, Michael E.; Chantrey, Julian 2016 2016-07-28 COMM-USE N PMC7088385 10.1007/s10344-016-1031-z 9xelf8oh 0.325756 Benson_2008, Dinh_2011 Njiru_2008
20 Dabisch-Ruthe_2012 Comparison of three multiplex PCR assays for the detection of respiratory viral infections: evaluation of xTAG respiratory virus panel fast assay, RespiFinder 19 assay and RespiFinder SMART 22 assay Dabisch-Ruthe, Mareike; Vollmer, Tanja; Adams, Ortwin; Knabbe, Cornelius; Dreier, Jens 2012 2012-07-24 COMM-USE N PMC3519643 22828244.0 10.1186/1471-2334-12-163 zntwwqod 0.321370 Vemulapalli_2009, Dinh_2011, Falcone_1997, Kang_2010, Benson_2008 Gueudin_2003, Rheem_2012
21 Wang_2009 A duplex real-time reverse transcriptase polymerase chain reaction assay for the detection of California serogroup and Cache Valley viruses Wang, Heng; Nattanmai, Seela; Kramer, Laura D.; Bernard, Kristen A.; Tavakoli, Norma P. 2009 2009-10-31 None N PMC2774246 19748425.0 10.1016/j.diagmicrobio.2009.07.001 ut7dlyh8 0.300577 Dinh_2011, Falcone_1997 Hull_2008, Malik_2013