Topic 08 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 21 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Shcherbik_2014 Application of real time RT-PCR for the genetic homogeneity and stability tests of the seed candidates for live attenuated influenza vaccine production Shcherbik, Svetlana; Sergent, Sheila B.; Davis, William G.; Shu, Bo; Barnes, John; Kiseleva, Irina; Larionova, Natalie; Klimov, Alexander; Bousse, Tatiana 2014 2014-01-01 PMC N PMC4607041 24056261.0 10.1016/j.jviromet.2013.09.003 m517te1g 0.688067
2 WEI_Y_2016 A duplex RT-PCR assay for detection of H9 subtype avian influenza viruses and infectious bronchitis viruses WEI, Yan-di; GAO, Wei-hua; SUN, Hong-lei; YU, Chen-fang; PEI, Xing-yao; SUN, Yi-peng; LIU, Jin-hua; PU, Juan 2016 2016-09-30 PMC N PMC7128909 10.1016/s2095-3119(15)61316-8 3yfcwwye 0.620896
3 Nakauchi_2011 Rapid discrimination of oseltamivir‐resistant 275Y and ‐susceptible 275H substitutions in the neuraminidase gene of pandemic influenza A/H1N1 2009 virus by duplex one‐step RT‐PCR assay Nakauchi, Mina; Ujike, Makoto; Obuchi, Masatsugu; Takashita, Emi; Takayama, Ikuyo; Ejima, Miho; Oba, Kunihiro; Konomi, Nami; Odagiri, Takato; Tashiro, Masato; Kageyama, Tsutomu 2011 2011-05-12 PMC N PMC7167129 21567417.0 10.1002/jmv.22101 qa58kts6 0.589014
4 OKINO_2018 Rapid detection and differentiation of avian infectious bronchitis virus: an application of Mass genotype by melting temperature analysis in RT-qPCR using SYBR Green I OKINO, Cintia Hiromi; MONTASSIER, Maria de Fátima Silva; de OLIVEIRA, Andressa Peres; MONTASSIER, Helio José 2018 2018-02-27 NONCOMM N PMC5938207 29491226.0 10.1292/jvms.17-0566 8bssrn9o 0.546661 Dinh_2011, Falcone_1997 Nemoto_2015
5 Carr_2009 Development of a real-time RT-PCR for the detection of Swine-lineage Influenza A (H1N1) virus infections Carr, Michael J.; Gunson, Rory; Maclean, Alasdair; Coughlan, Suzie; Fitzgerald, Margaret; Scully, Mary; O’Herlihy, Brian; Ryan, John; O’Flanagan, Darina; Connell, Jeff; Carman, William F.; Hall, William W. 2009 2009-07-31 PMC N 19540799.0 10.1016/j.jcv.2009.06.001 px9h96wp 0.545492
6 Yuk_S_2016 Comparison between dot-immunoblotting assay and clinical sign determination method for quantifying avian infectious bronchitis virus vaccine by titration in embryonated eggs Yuk, Seong-su; Kwon, Jung-Hoon; Noh, Jin-Yong; Hong, Woo-tack; Gwon, Gyeong-Bin; Jeong, Jei-Hyun; Jeong, Sol; Youn, Ha-Na; Heo, Yong-Hwan; Lee, Joong-Bok; Park, Seung-Yong; Choi, In-Soo; Song, Chang-Seon 2016 2016-04-30 PMC N PMC7119534 26802454.0 10.1016/j.jviromet.2016.01.008 ujabzic4 0.537605 Dinh_2011
7 Carr_2008 Rapid molecular detection of the H275Y oseltamivir resistance gene mutation in circulating influenza A (H1N1) viruses Carr, Michael J.; Sayre, Naomi; Duffy, Margaret; Connell, Jeff; Hall, William W. 2008 2008-11-30 PMC N PMC7112815 18718489.0 10.1016/j.jviromet.2008.07.011 yvmdh7xh 0.536392 Dinh_2011
8 Laconi_2020 Infectious bronchitis virus Mass-type (GI-1) and QX-like (GI-19) genotyping and vaccine differentiation using SYBR green RT-qPCR paired with melting curve analysis Laconi, Andrea; Berends, Alinda J.; de Laat, Esther C.H.; Urselmann, Tara A.P.M.P.; Verheije, Hélène M. 2020 2020-01-31 PMC N PMC7113787 31712091.0 10.1016/j.jviromet.2019.113771 n9q99hdn 0.531474 Dinh_2011
9 Nakauchi_2011 One-step real-time reverse transcription-PCR assays for detecting and subtyping pandemic influenza A/H1N1 2009, seasonal influenza A/H1N1, and seasonal influenza A/H3N2 viruses Nakauchi, Mina; Yasui, Yoshihiro; Miyoshi, Tatsuya; Minagawa, Hiroko; Tanaka, Tomoyuki; Tashiro, Masato; Kageyama, Tsutomu 2011 2011-01-31 PMC N 21029748.0 10.1016/j.jviromet.2010.10.018 d6125u1b 0.508424 Dinh_2011, Kang_2010
10 Saito_2019 Development and evaluation of a new real‐time RT‐PCR assay for detecting the latest H9N2 influenza viruses capable of causing human infection Saito, Shinji; Takayama, Ikuyo; Nakauchi, Mina; Nagata, Shiho; Oba, Kunihiro; Odagiri, Takato; Kageyama, Tsutomu 2019 2019-01-30 NONCOMM N PMC6590187 30599081.0 10.1111/1348-0421.12666 n5i3ecy2 0.505048 Choudhary_2013
11 Hatano_2011 Mobile and accurate detection system for infection by the 2009 pandemic influenza A (H1N1) virus with a pocket‐warmer reverse‐transcriptase loop‐mediated isothermal amplification Hatano, Ben; Goto, Megumi; Fukumoto, Hitomi; Obara, Takeyuki; Maki, Takayuki; Suzuki, Go; Yamamoto, Tetsuo; Hagisawa, Kohsuke; Matsushita, Yoshitaro; Fujii, Tatsuya; Imakiire, Toshihiko; Kikuchi, Yuichi; Takahashi, Ryota; Kanai, Mie; Tamura, Kaku; Izumi, Tomoko; Takahashi, Yukihiro; Iwamoto, Yujiro; Mimura, Satoshi; Mukai, Yasuo; Takita, Kazue; Takeo, Hiroki; Kitamura, Ryuichi; Shimizu, Eiichi; Fukushima, Koji; Hakozaki, Yukiya; Uehata, Akimi; Sakai, Masao; Ohshima, Satoshi; Shirotani, Toshiki; Oba, Kunihiro; Hasegawa, Hideki; Sata, Tetsutaro; Katano, Harutaka 2011 2011-02-15 PMC N PMC7166801 21328369.0 10.1002/jmv.22031 zqhpkhfz 0.491767
12 Inui_2019 A field‐deployable insulated isothermal RT‐PCR assay for identification of influenza A (H7N9) shows good performance in the laboratory Inui, Ken; Nguyen, Tung; Tseng, Hsin‐Jou; Tsai, ChuanFu Mark; Tsai, Yun‐Long; Chung, Simon; Padungtod, Pawin; Zhu, Huachen; Guan, Yi; Kalpravidh, Wantanee; Claes, Filip 2019 2019-09-05 COMM-USE N PMC6800302 31487118.0 10.1111/irv.12646 q2ilk6gs 0.485237
13 Naguib_2017 New real time and conventional RT-PCRs for updated molecular diagnosis of infectious bronchitis virus infection (IBV) in chickens in Egypt associated with frequent co-infections with avian influenza and Newcastle Disease viruses Naguib, Mahmoud M.; El-Kady, Magdy F.; Lüschow, Dörte; Hassan, Kareem E.; Arafa, Abdel-Satar; El-Zanaty, Ali; Hassan, Mohamed K.; Hafez, Hafez M.; Grund, Christian; Harder, Timm C. 2017 2017-07-31 PMC N PMC7113857 28336367.0 10.1016/j.jviromet.2017.02.018 k23engcx 0.470800 Dinh_2011, Falcone_1997
14 Lau_L_2004 Nucleic acid sequence-based amplification methods to detect avian influenza virus Lau, Lok-Ting; Banks, Jill; Aherne, Rebecca; Brown, Ian H.; Dillon, Natalie; Collins, Richard A.; Chan, Ka-Yun; Fung, Yin-Wan Wendy; Xing, Jun; Yu, Albert C.H. 2004 2004-01-09 PMC N PMC7111163 14684165.0 10.1016/j.bbrc.2003.11.131 g8v47wrz 0.468726
15 Jones_2011 Development and Validation of RT‐PCR Tests for the Detection and S1 Genotyping of Infectious Bronchitis Virus and Other Closely Related Gammacoronaviruses Within Clinical Samples Jones, R. M.; Ellis, R. J.; Cox, W. J.; Errington, J.; Fuller, C.; Irvine, R. M.; Wakeley, P. R. 2011 2011-04-07 PMC N PMC7169724 21477114.0 10.1111/j.1865-1682.2011.01222.x yjt3q9ph 0.448779 Dinh_2011, Vemulapalli_2009, Falcone_1997, Benson_2008
16 Sakurai_2013 Broad-Spectrum Detection of H5 Subtype Influenza A Viruses with a New Fluorescent Immunochromatography System Sakurai, Akira; Takayama, Katsuyoshi; Nomura, Namiko; Munakata, Tsubasa; Yamamoto, Naoki; Tamura, Tsuruki; Yamada, Jitsuho; Hashimoto, Masako; Kuwahara, Kazuhiko; Sakoda, Yoshihiro; Suda, Yoshihiko; Kobayashi, Yukuharu; Sakaguchi, Nobuo; Kida, Hiroshi; Kohara, Michinori; Shibasaki, Futoshi 2013 2013-11-06 COMM-USE N PMC3819354 24223117.0 10.1371/journal.pone.0076753 g7ouajja 0.440272 Thuy_Tien_2018
17 Xiao_2019 Development of oligonucleotide microarray for accurate and simultaneous detection of avian respiratory viral diseases Xiao, Qian; Yan, Liping; Yao, Lu; Lei, Jing; Bi, Zhenwei; Hu, Jianhua; Chen, Yuqing; Fang, An; Li, Hui; Li, Yuan; Yan, Yan; Zhou, Jiyong 2019 2019-07-19 COMM-USE N PMC6642548 31324180.0 10.1186/s12917-019-1985-7 wryr7qhc 0.438245
18 Stefańska_2013 Application of three duplex real-time PCR assays for simultaneous detection of human seasonal and avian influenza viruses Stefańska, Ilona; Dzieciatkowski, Tomasz; Brydak, Lidia B.; Romanowska, Magdalena 2013 2013-03-21 PMC N PMC7086839 23515874.0 10.1007/s00705-013-1648-0 t847pji4 0.429208 Dinh_2011, Kang_2010 Kang_2010, Huang_2009
19 Komissarov_2017 Development of a realtime RT-PCR assay for the rapid detection of influenza A(H2) viruses Komissarov, Andrey; Fadeev, Artem; Kosheleva, Anna; Sintsova, Kseniya; Grudinin, Mikhail 2017 2017-10-31 PMC N PMC7126497 28652020.0 10.1016/j.mcp.2017.06.005 ozv0zp7r 0.408244 Dinh_2011 Shirato_2007
20 Chutinimitkul_2007 H5N1 Oseltamivir-resistance detection by real-time PCR using two high sensitivity labeled TaqMan probes Chutinimitkul, Salin; Suwannakarn, Kamol; Chieochansin, Thaweesak; Mai, Le Quynh; Damrongwatanapokin, Sudarat; Chaisingh, Arunee; Amonsin, Alongkorn; Landt, Olfert; Songserm, Thaweesak; Theamboonlers, Apiradee; Poovorawan, Yong 2007 2007-01-31 PMC N PMC7112789 17055070.0 10.1016/j.jviromet.2006.09.007 rjp2d1u9 0.406269 Dinh_2011 Carr_2008
21 Nakauchi_2014 Real-time RT-PCR assays for discriminating influenza B virus Yamagata and Victoria lineages Nakauchi, Mina; Takayama, Ikuyo; Takahashi, Hitoshi; Oba, Kunihiro; Kubo, Hideyuki; Kaida, Atsushi; Tashiro, Masato; Kageyama, Tsutomu 2014 2014-09-01 PMC N 24797457.0 10.1016/j.jviromet.2014.04.016 9gtx4bhp 0.404811 Dinh_2011
22 Hourfar_2007 Blood Screening for Influenza Hourfar, Michael Kai; Themann, Anna; Eickmann, Markus; Puthavathana, Pilaipan; Laue, Thomas; Seifried, Erhard; Schmidt, Michael 2007 2007-07-23 PMC N PMC2878216 18214186.0 10.3201/eid1307.060861 oqwevkrb 0.404408
23 Le_T_2020 Development of a Multiplex RT-qPCR for the Detection of Different Clades of Avian Influenza in Poultry Le, Tran Bac; Kim, Hye Kwon; Na, Woonsung; Le, Van Phan; Song, Min-Suk; Song, Daesub; Jeong, Dae Gwin; Yoon, Sun-Woo 2020 2020-01-15 COMM-USE N PMC7019278 31952218.0 10.3390/v12010100 5dub8nv7 0.404121 Dinh_2011 Nemoto_2015
24 Ahn_S_2019 Rapid and simple colorimetric detection of multiple influenza viruses infecting humans using a reverse transcriptional loop-mediated isothermal amplification (RT-LAMP) diagnostic platform Ahn, Su Jeong; Baek, Yun Hee; Lloren, Khristine Kaith S.; Choi, Won-Suk; Jeong, Ju Hwan; Antigua, Khristine Joy C.; Kwon, Hyeok-il; Park, Su-Jin; Kim, Eun-Ha; Kim, Young-il; Si, Young-Jae; Hong, Seung Bok; Shin, Kyeong Seob; Chun, Sungkun; Choi, Young Ki; Song, Min-Suk 2019 2019-08-01 COMM-USE N PMC6669974 31370782.0 10.1186/s12879-019-4277-8 exf1mh36 0.399276 Shirato_2007, Mu_Y_2014, Malik_2013, Sharma_2018
25 Domanska‐Blicharz_2017 Specific detection of GII‐1 lineage of infectious bronchitis virus Domanska‐Blicharz, K.; Lisowska, A.; Pikuła, A.; Sajewicz‐Krukowska, J. 2017 2017-07-03 PMC N PMC7165721 28493279.0 10.1111/lam.12753 2rmtsyns 0.382857 Dinh_2011
26 Fujino_2005 A simple method for the detection of measles virus genome by loop‐mediated isothermal amplification (LAMP) Fujino, Motoko; Yoshida, Naoko; Yamaguchi, Shinya; Hosaka, Norimitsu; Ota, Yoshinori; Notomi, Tsugunori; Nakayama, Tetsuo 2005 2005-05-18 PMC N PMC7166939 15902708.0 10.1002/jmv.20371 uknui1t6 0.382571 Falcone_1997, Dinh_2011
27 Lee_H_2012 A Universal Influenza A and B Duplex Real‐time RT‐PCR Assay Lee, Hong Kai; Loh, Tze Ping; Lee, Chun Kiat; Tang, Julian Wei‐Tze; Chiu, Lily; Koay, Evelyn Siew‐Chuan 2012 2012-08-15 PMC N PMC7166972 22930514.0 10.1002/jmv.23375 eke5pwe3 0.379514 Dinh_2011, Kang_2010
28 Muradrasoli_2010 Broadly targeted triplex real-time PCR detection of influenza A, B and C viruses based on the nucleoprotein gene and a novel “MegaBeacon” probe strategy Muradrasoli, Shaman; Mohamed, Nahla; Belák, Sándor; Czifra, György; Herrmann, Björn; Berencsi, George; Blomberg, Jonas 2010 2010-02-28 PMC N 19879296.0 10.1016/j.jviromet.2009.10.017 i31tvvub 0.370742 Dinh_2011
29 Minosse_2007 Improved detection of human influenza A and B viruses in respiratory tract specimens by hemi-nested PCR Minosse, Claudia; Selleri, Marina; Zaniratti, Maria S.; Lauria, Francesco N.; Puro, Vincenzo; Carletti, Fabrizio; Cappiello, Giuseppina; Gualano, Gina; Bevilacqua, Nazario; Capobianchi, Maria R. 2007 2007-05-31 PMC N PMC7119638 17257688.0 10.1016/j.jviromet.2006.12.010 7aaj8anv 0.364473 Dinh_2011, Kang_2010 Shirato_2007, Gueudin_2003
30 Zhu_Z_2013 Development and Evaluation of a SYBR Green-Based Real Time RT-PCR Assay for Detection of the Emerging Avian Influenza A (H7N9) Virus Zhu, Zheng; Fan, Huan; Qi, Xian; Qi, Yuhua; Shi, Zhiyang; Wang, Hua; Cui, Lunbiao; Zhou, Minghao 2013 2013-11-20 COMM-USE N PMC3835827 24278234.0 10.1371/journal.pone.0080028 ajqkc91q 0.363237 Dinh_2011 Kumar_2010
31 Lee_H_2010 Diagnostic Testing for Pandemic Influenza in Singapore A Novel Dual-Gene Quantitative Real-Time RT-PCR for the Detection of Influenza A/H1N1/2009 Lee, Hong Kai; Lee, Chun Kiat; Loh, Tze Ping; Tang, Julian Wei-Tze; Chiu, Lily; Tambyah, Paul A.; Sethi, Sunil K.; Koay, Evelyn Siew-Chuan 2010 2010-09-30 PMC N 10.2353/jmoldx.2010.100010 gjek77ny 0.362428 Dinh_2011
32 Meir_2010 Development of a real-time TaqMan® RT-PCR assay for the detection of infectious bronchitis virus in chickens, and comparison of RT-PCR and virus isolation Meir, Rosie; Maharat, Ora; Farnushi, Ygal; Simanov, Lubov 2010 2010-02-28 PMC N PMC7112792 19781572.0 10.1016/j.jviromet.2009.09.014 5z91exuk 0.350672 Dinh_2011, Lau_L_2003, Falcone_1997, Jiang_2004 Gueudin_2003, Cuevas-Romero_2013
33 Sun_N_2018 Reverse transcription recombinase polymerase amplification with lateral flow dipsticks for detection of influenza A virus and subtyping of H1 and H3 Sun, Ning; Wang, Weiping; Wang, Jie; Yao, Xinyue; Chen, Fangfang; Li, Xiaojun; Yinglei, Yi; Chen, Bo 2018 2018-12-31 PMC N PMC7127182 30394299.0 10.1016/j.mcp.2018.10.004 z7bd3a91 0.343548 Dinh_2011, Vemulapalli_2009, Kang_2010, Stefańska_2013 Zhang_2014, Nemoto_2015
34 Li_Y_2013 Simultaneous detection of hemagglutinin and neuraminidase genes of novel influenza A (H7N9) by duplex real-time reverse transcription polymerase chain reaction Li, Yan; Wu, Tao; Qi, Xian; Ge, Yiyue; Guo, Xiling; Wu, Bin; Yu, Huiyan; Zhu, Yefei; Shi, Zhiyang; Wang, Hua; Cui, Lunbiao; Zhou, Minghao 2013 2013-12-31 PMC N PMC7113656 24001700.0 10.1016/j.jviromet.2013.08.021 z849jvq5 0.340178 Dinh_2011, Kang_2010 Shirato_2007
35 Chen_2010 Reverse transcription loop-mediated isothermal amplification for the rapid detection of infectious bronchitis virus in infected chicken tissues Chen, Hao-tai; Zhang, Jie; Ma, Yan-ping; Ma, Li-na; Ding, Yao-zhong; Liu, Xiang-tao; Cai, Xue-peng; Ma, Li-qing; Zhang, Yong-guang; Liu, Yong-sheng 2010 2010-04-30 PMC N PMC7126806 19835950.0 10.1016/j.mcp.2009.10.001 ytaro52p 0.335158 Ren_X_2011, Dinh_2011 Nemoto_2015, Chandrasekar_2015, Shirato_2007, Li_H_2019
36 Liu_I_2019 A Novel Immunochromatographic Strip for Antigen Detection of Avian Infectious Bronchitis Virus Liu, I-Li; Lin, Yi-Chun; Lin, Yong-Chong; Jian, Cai-Zhen; Cheng, Ivan-Chen; Chen, Hui-Wen 2019 2019-05-06 COMM-USE N PMC6540333 31064083.0 10.3390/ijms20092216 k0162dg6 0.329514 Chen_2012, Thuy_Tien_2018
37 Sharma_2018 Evaluation of clinical applicability of reverse transcription-loop-mediated isothermal amplification assay for detection and subtyping of Influenza A viruses Sharma, Vikrant; Chaudhry, Dhruva; Kaushik, Samander 2018 2018-03-31 PMC N PMC7113880 29253497.0 10.1016/j.jviromet.2017.12.005 9k2oox64 0.322109 Dinh_2011, Kang_2010 Nemoto_2015, Shirato_2007
38 Sakurai_2011 Rapid typing of influenza viruses using super high-speed quantitative real-time PCR Sakurai, Akira; Nomura, Namiko; Nanba, Reiko; Sinkai, Takayuki; Iwaki, Tsunehito; Obayashi, Taminori; Hashimoto, Kazuhiro; Hasegawa, Michiya; Sakoda, Yoshihiro; Naito, Akihiro; Morizane, Yoshihito; Hosaka, Mitsugu; Tsuboi, Kunio; Kida, Hiroshi; Kai, Akemi; Shibasaki, Futoshi 2011 2011-12-31 PMC N PMC7119501 21889540.0 10.1016/j.jviromet.2011.08.015 84vf5bts 0.313928 Dinh_2011, Kang_2010 Malik_2013, Gueudin_2003
39 Chi_X_2007 Semiquantitative one-step RT-PCR for simultaneous identification of human influenza and respiratory syncytial viruses Chi, X. Sherry; Li, Fenglan; Tam, John S.; Rappaport, Ruth; Cheng, Sheau-Mei 2007 2007-01-31 PMC N PMC7112931 17030067.0 10.1016/j.jviromet.2006.08.015 hj1k1jtu 0.312363 Lau_L_2003, Jiang_2004, Wang_2018, Chen_2008 Gueudin_2003, Shirato_2007, Mu_Y_2014
40 Wang_2018 Development of a sensitive and specific xMAP assay for detection of antibodies against infectious laryngotracheitis and bronchitis viruses Wang, Huanan; Cong, Feng; Guan, Jianchi; Xiao, Li; Zhu, Yujun; Lian, Yuexiao; Huang, Ren; Chen, Meili; Guo, Pengju 2018 2018-09-21 COMM-USE N PMC6151043 30241540.0 10.1186/s12985-018-1048-x eqqvwwh6 0.307885
41 Chi_Y_2017 Multiplex Reverse-Transcription Loop-Mediated Isothermal Amplification Coupled with Cascade Invasive Reaction and Nanoparticle Hybridization for Subtyping of Influenza A Virus Chi, Ying; Ge, Yiyue; Zhao, Kangchen; Zou, Bingjie; Liu, Bin; Qi, Xian; Bian, Qian; Shi, Zhiyang; Zhu, Fengcai; Zhou, Minghao; Cui, Lunbiao; Su, Chuan 2017 2017-03-21 COMM-USE N PMC5359610 28322309.0 10.1038/srep44924 mid2w6yo 0.307222 Dinh_2011, Chen_2010, Wang_2018, Fan_Q_2012 Nemoto_2015, Shirato_2007, Reddy_2011
42 Kang_2010 A duplex real-time RT-PCR assay for detecting H5N1 avian influenza virus and pandemic H1N1 influenza virus Kang, Xiao-ping; Jiang, Tao; Li, Yong-qiang; Lin, Fang; Liu, Hong; Chang, Guo-hui; Zhu, Qing-yu; Qin, E-de; Qin, Cheng-feng; Yang, Yin-hui 2010 2010-06-02 COMM-USE N PMC2892456 20515509.0 10.1186/1743-422x-7-113 lakdi3x8 0.305680 Dinh_2011 Kumar_2010, Gueudin_2003
43 Wang_1999 A multiplex PCR for Massachusetts and Arkansas serotypes of infectious bronchitis virus Wang, X.; Khan, M.I. 1999 1999-02-28 PMC N PMC7135714 10024427.0 10.1006/mcpr.1998.0204 pjmd8mpv 0.301704 Falcone_1997, Dinh_2011