Topic 26 -- Abstracts with Biological Entities (English) - 75 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Hellewell_2020 Feasibility of controlling 2019-nCoV outbreaks by isolation of cases and contacts Joel Hellewell; Sam Abbott; Amy Gimma; Nikos I Bosse; Christopher I Jarvis; Timothy W Russell; James D Munday; Adam J Kucharski; W John Edmunds; CMMID nCoV working group; Sebastian Funk; Rosalind M Eggo 2020 2020-02-11 BioRxiv Y 10.1101/2020.02.08.20021162 a8ig607t 0.896935 Polverino_2017, Li_C_2018, Mondor_2012, Chen_2018, Wu_Q_2014 Hellewell_2020, Kretzschmar_2020, Tang_2020, Xia_W_2020
2 Sjödin_2020 Only strict quarantine measures can curb the coronavirus disease (COVID-19) outbreak in Italy, 2020 Sjödin, Henrik; Wilder-Smith, Annelies; Osman, Sarah; Farooq, Zia; Rocklöv, Joacim 2020 2020-04-02 None Y PMC7140595 32265005.0 10.2807/1560-7917.es.2020.25.13.2000280 agnbus8b 0.874198 Fielding_2014, Mack_2007, Atkinson_2020, Coker_2007, Griffiths_2010 Corman_2019, Jiang_2020, Park_2007
3 Hellewell_2020 Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts Hellewell, Joel; Abbott, Sam; Gimma, Amy; Bosse, Nikos I; Jarvis, Christopher I; Russell, Timothy W; Munday, James D; Kucharski, Adam J; Edmunds, W John; Funk, Sebastian; Eggo, Rosalind M 2020 2020-02-28 None Y PMC7097845 32119825.0 10.1016/s2214-109x(20)30074-7 ueb7mjnv 0.859517 Polverino_2017, Li_C_2018, Mondor_2012, Wu_Q_2014, Welch_2011 Kretzschmar_2020, Hellewell_2020, Xia_W_2020
4 Tindale_2020 Transmission interval estimates suggest pre-symptomatic spread of COVID-19 Lauren Tindale; Michelle Coombe; Jessica E Stockdale; Emma Garlock; Wing Yin Venus Lau; Manu Saraswat; Yen-Hsiang Brian Lee; Louxin Zhang; Dongxuan Chen; Jacco Wallinga; Caroline Colijn 2020 2020-03-06 BioRxiv Y 10.1101/2020.03.03.20029983 66ulqu11 0.848866 Muniz-Rodriguez_2020, Tomie_2020, Muniz-Rodriguez_2020, Lim_T_2012 Ganyani_2020, Xia_W_2020, Yuan_2020, Li_M_2020
5 Quilty_2020 Effectiveness of airport screening at detecting travellers infected with novel coronavirus (2019-nCoV) Quilty, Billy J; Clifford, Sam; Flasche, Stefan; Eggo, Rosalind M 2020 2020-02-06 None Y PMC7014668 32046816.0 10.2807/1560-7917.es.2020.25.5.2000080 626ch774 0.773339 Blendon_2008, Mack_2007, Rusoke-Dierich_2018, Mondor_2012 Quilty_2020, Kuan_2012, Gostic_2020, Rabaa_2015
6 Quilty_2020 Effectiveness of airport screening at detecting travellers infected with 2019-nCoV Billy Quilty; Sam Clifford; Stefan Flasche; Rosalind M Eggo 2020 2020-02-02 BioRxiv Y 10.1101/2020.01.31.20019265 2wshgzjk 0.754508 Stenseth_2008, Mack_2007, Rusoke-Dierich_2018, Polverino_2017, Pai_M_2006 Quilty_2020, Kuan_2012, Rabaa_2015, Tang_2020
7 Jarvis_2020 Quantifying the impact of physical distance measures on the transmission of COVID-19 in the UK Christopher I Jarvis; Kevin Van Zandvoort; Amy Gimma; Kiesha Prem; Petra Klepac; G James Rubin; W John Edmunds 2020 2020-04-03 BioRxiv Y 10.1101/2020.03.31.20049023 8do4tojk 0.735090 Polverino_2017, Mack_2007, Looker_2006, Rusoke-Dierich_2018, Stenseth_2008 Kretzschmar_2020, Soucy_2020, Kraemer_2020, Stein_2014
8 Clifford_2020 Interventions targeting air travellers early in the pandemic may delay local outbreaks of SARS-CoV-2 Samuel J Clifford; Carl A B Pearson; Petra Klepac; Kevin Van Zandvoort; Billy J Quilty; Rosalind M Eggo; Stefan Flasche 2020 2020-02-13 BioRxiv Y 10.1101/2020.02.12.20022426 y7d3ux28 0.723814 Rusoke-Dierich_2018, Atkinson_2020, Mondor_2012, Pai_M_2006, Blendon_2008 Koo_J_2020, Mukherjee_2010, Kretzschmar_2020, Cho_S_2016
9 Cowling_2020 Epidemiological research priorities for public health control of the ongoing global novel coronavirus (2019-nCoV) outbreak Cowling, Benjamin J; Leung, Gabriel M 2020 2020-02-13 COMM-USE Y PMC7029449 32046814.0 10.2807/1560-7917.es.2020.25.6.2000110 belin2jq 0.715125 Polverino_2017, Lauro_2020, Sadun_2020, Pearson_2020, Li_C_2018 Xia_W_2020, Ma_S_2020, Nemoto_2014, Baier_2018
10 Day_T_2006 When Is Quarantine a Useful Control Strategy for Emerging Infectious Diseases? Day, Troy; Park, Andrew; Madras, Neal; Gumel, Abba; Wu, Jianhong 2006 2006-03-01 PMC N PMC7109638 16421244.0 10.1093/aje/kwj056 e350kj7m 0.684484 Mack_2007, Stenseth_2008, Looker_2006, Lauro_2020, Atkinson_2020 Safi_2011, Safi_2013, Rabaa_2015, Dénes_2019
11 Xia_W_2020 Transmission of corona virus disease 2019 during the incubation period may lead to a quarantine loophole Wei Xia; Jiaqiang Liao; Chunhui Li; Yuanyuan Li; Xi Qian; Xiaojie Sun; Hongbo Xu; Gaga Mahai; Xin Zhao; Lisha Shi; Juan Liu; Ling Yu; Meng Wang; Qianqian Wang; Asmagvl Namat; Ying Li; Jingyu Qu; Qi Liu; Xiaofang Lin; Shuting Cao; Shu Huan; Jiying Xiao; Fengyu Ruan; Hanjin Wang; Qing Xu; Xingjuan Ding; Xingjie Fang; Feng Qiu; Jiaolong Ma; Yu Zhang; Aizhen Wang; Yuling Xing; Shunqing Xu 2020 2020-03-08 BioRxiv Y 10.1101/2020.03.06.20031955 v3gww4iv 0.676370 Mondor_2012, Pearson_2020, Polverino_2017, Linton_2020, McBryde_2006 Nemoto_2014, Munywoki_2015
12 Matrajt_2020 Evaluating the effectiveness of social distancing interventions against COVID-19 Laura Matrajt; Tiffany Leung 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.27.20044891 0a49okho 0.671288 Mack_2007, Atkinson_2020, Stenseth_2008, Blendon_2008, Ropeik_2004 Kissler_2020, Zhang_2020, Milne_2020, Chowell_2020
13 Nishiura_2020 Serial interval of novel coronavirus (COVID-19) infections Nishiura, Hiroshi; Linton, Natalie M.; Akhmetzhanov, Andrei R. 2020 2020-01-01 None Y 32145466.0 10.1016/j.ijid.2020.02.060 8n4vklsf 0.669656 Largo_2016, Choudhury_2011, David_2013, Abou-Hamdan_2018, Polverino_2017 Nishiura_2020, Xia_W_2020, Du_Z_2020, Agoti_2019
14 Li_D_2020 Estimating the Efficacy of Traffic Blockage and Quarantine for the Epidemic Caused by 2019-nCoV (COVID-19) Deqiang Li; Zhicheng Liu; Qinghe Liu; Zefei Gao; Junkai Zhu; Junyan Yang; Qiao Wang 2020 2020-02-17 BioRxiv Y 10.1101/2020.02.14.20022913 6f6t558e 0.665472 Mack_2007, Stenseth_2008, Li_C_2018, Polverino_2017, Coker_2007 Yuan_2020, Tang_2020, Tang_2020
15 Caley_2007 The Waiting Time for Inter-Country Spread of Pandemic Influenza Caley, Peter; Becker, Niels G.; Philp, David J. 2007 2007-01-03 COMM-USE N PMC1764036 17206278.0 10.1371/journal.pone.0000143 nzh87aux 0.665259 Mack_2007, Cinti_2005, UNKNOWN_2010, Mondor_2012, Lu_J_2020 Nishiura_2007, Kretzschmar_2020, Ribeiro_2020, Ng_T_2003
16 Xu_x_2020 Close contacts and household transmission of SARS-CoV-2 in China: a content analysis based on local Heath Commissions' public disclosures. xiaoke Xu; Xiaofan Liu; Ye Wu; Sheikh Taslim ALI 2020 2020-03-06 BioRxiv N 10.1101/2020.03.02.20029868 b10yokyu 0.662249 Griffiths_2010, Stenseth_2008, Coker_2007, Atkinson_2020, Fielding_2014 Lau_J_2004, Wang_2020, Otomaru_2019, Desclaux_2016
17 Li_M_2020 Transmission characteristics of the COVID-19 outbreak in China: a study driven by data Meili Li; Pian Chen; Qianqian Yuan; Baojun Song; Junling Ma 2020 2020-03-01 BioRxiv Y 10.1101/2020.02.26.20028431 px0twvhs 0.660138 Mondor_2012, Atkinson_2020, Rusoke-Dierich_2018, Mack_2007 Xia_W_2020, Yuan_2020, Kretzschmar_2020
18 Teslya_2020 Impact of self-imposed prevention measures and short-term government intervention on mitigating and delaying a COVID-19 epidemic Alexandra Teslya; Thi Mui Pham; Noortje E. Godijk; Mirjam E. Kretzschmar; Martin C.J. Bootsma; Ganna Rozhnova 2020 2020-03-16 BioRxiv Y 10.1101/2020.03.12.20034827 xfjexm5b 0.657062 Mack_2007, Coker_2007, Mwabu_2008, Wei_B_2011, Kruk_2008 Milne_2020, Anderson_2020, Yuan_2020, Shetty_2019
19 Wilder-Smith_2006 Experience of Severe Acute Respiratory Syndrome in Singapore: Importation of Cases, and Defense Strategies at the Airport Wilder-Smith, Annelies; Goh, Kee Tai; Paton, Nicholas I 2006 2006-03-08 PMC N PMC7107530 14531977.0 10.2310/7060.2003.2676 qz9msrl7 0.656579 UNKNOWN_2010, Rodier_2007, Buseh_2015, Griffiths_2010, Lim_T_2012 WIN_M_2016, Leung_2004, Balkhy_2016
20 Toth_2015 Estimates of Outbreak Risk from New Introductions of Ebola with Immediate and Delayed Transmission Control Toth, Damon J.A.; Gundlapalli, Adi V.; Khader, Karim; Pettey, Warren B.P.; Rubin, Michael A.; Adler, Frederick R.; Samore, Matthew H. 2015 2015-08-23 None N PMC4517734 26196264.0 10.3201/eid2108.150170 gl2gbqi9 0.653391 Buseh_2015, Azman_2016, Cinti_2005, Brucker_2020, Mack_2007 Yuan_2020, Jiménez-Morillas_2019, Sikakulya_2019
21 Mizumoto_2020 Transmission potential of the novel coronavirus (COVID-19) onboard the Diamond Princess Cruises Ship, 2020 Kenji Mizumoto; Gerardo Chowell 2020 2020-02-27 BioRxiv Y 10.1101/2020.02.24.20027649 eoxrh2sl 0.647903 Li_C_2018, Mondor_2012, Chen_2018, Wu_Q_2014, UNKNOWN_2010 Mizumoto_2020, Adney_2019, Crameri_2015, Sekizuka_2020
22 Thompson_2020 2019-20 Wuhan coronavirus outbreak: Intense surveillance is vital for preventing sustained transmission in new locations R.N. Thompson 2020 2020-01-25 BioRxiv Y 10.1101/2020.01.24.919159 qpaig5tm 0.646106 Cinti_2005, UNKNOWN_2010, Wang_2014, Lu_P_2016, Buseh_2015 Thompson_2020, Ralph_2020, Bassetti_2020
23 Lee_V_2020 Interrupting transmission of COVID-19: lessons from containment efforts in Singapore Lee, Vernon J; Chiew, Calvin J; Khong, Wei Xin 2020 2020-03-13 PMC Y PMC7107552 32167146.0 10.1093/jtm/taaa039 kk2zu9gq 0.645413 Stenseth_2008, Mack_2007, Buseh_2015, Griffiths_2010, Guery_2014 Wiboonchutikul_2017, Yuan_2020
24 Porco_2004 Logistics of community smallpox control through contact tracing and ring vaccination: a stochastic network model Porco, Travis C; Holbrook, Karen A; Fernyak, Susan E; Portnoy, Diane L; Reiter, Randy; Aragón, Tomás J 2004 2004-08-06 COMM-USE N PMC520756 15298713.0 10.1186/1471-2458-4-34 sgmk96vr 0.645394 Mack_2007, Stenseth_2008, Coker_2007, Rusoke-Dierich_2018, Apisarnthanarak_2007 Kretzschmar_2004, Kretzschmar_2020, House_2010, Hellewell_2020
25 Leung_2020 The difference in the incubation period of 2019 novel coronavirus (SARS-CoV-2) infection between travelers to Hubei and non-travelers: The need of a longer quarantine period Leung, Char 2020 2020-03-18 PMC N PMC7137532 32183920.0 10.1017/ice.2020.81 n0vmb946 0.642855 Mondor_2012, Tomie_2020, Polverino_2017, Trigger_2020 Li_P_2020, Xu_D_2005, Xia_W_2020
26 Linton_2020 Incubation Period and Other Epidemiological Characteristics of 2019 Novel Coronavirus Infections with Right Truncation: A Statistical Analysis of Publicly Available Case Data Linton, M. Natalie; Kobayashi, Tetsuro; Yang, Yichi; Hayashi, Katsuma; Akhmetzhanov, R. Andrei; Jung, Sung-mok; Yuan, Baoyin; Kinoshita, Ryo; Nishiura, Hiroshi 2020 2020-01-01 COMM-USE Y PMC7074197 32079150.0 10.3390/jcm9020538 4vrqzbof 0.642182 Mondor_2012, Linton_2020, Kenah_2012, Chen_2018, batista_2020 Linton_2020, Xia_W_2020, Jing_2020, Ma_S_2020
27 Wilder-Smith_2020 Isolation, quarantine, social distancing and community containment: pivotal role for old-style public health measures in the novel coronavirus (2019-nCoV) outbreak Wilder-Smith, A; Freedman, D O 2020 2020-02-13 PMC Y PMC7107565 32052841.0 10.1093/jtm/taaa020 ophojm43 0.639812 Mack_2007, Stenseth_2008, Coker_2007, Atkinson_2020, Blendon_2008 Rabaa_2015, Wiboonchutikul_2017, Tognotti_2013, Al-Tawfiq_2014
28 Cowling_2010 Entry screening to delay local transmission of 2009 pandemic influenza A (H1N1) Cowling, Benjamin J; Lau, Lincoln LH; Wu, Peng; Wong, Helen WC; Fang, Vicky J; Riley, Steven; Nishiura, Hiroshi 2010 2010-03-30 COMM-USE N PMC3152767 20353566.0 10.1186/1471-2334-10-82 dc6xbxha 0.637009 UNKNOWN_2010, Walker_2010, Apisarnthanarak_2007, Coker_2007, Amirov_2007 Selvey_2015, Xia_W_2020, van_der_Sande_2012
29 Sugishita_2020 Forecast of the COVID-19 outbreak, collapse of medical facilities, and lockdown effects in Tokyo, Japan Yoshiyuki Sugishita; Junko Kurita; Tamie Sugawara; Yasushi Ohkusa 2020 2020-04-06 BioRxiv Y 10.1101/2020.04.02.20051490 86ovj7xg 0.634301 Stenseth_2008, Mack_2007, Griffiths_2010, Rusoke-Dierich_2018, Polverino_2017 Filho_2020, Siraj_2020, Chintalapudi_2020
30 Sugishita_2020 Preliminary evaluation of voluntary event cancellation as a countermeasure against the COVID-19 outbreak in Japan as of 11 March, 2020 Yoshiyuki Sugishita; Junko Kurita; Tamie Sugawara; Yasushi Ohkusa 2020 2020-03-16 BioRxiv N 10.1101/2020.03.12.20035220 zowo5ojd 0.632323 Abou-Hamdan_2018, Choudhury_2011, David_2013, Largo_2016, Muniz-Rodriguez_2020 Sugishita_2020, Kurita_2020, Ohkusa_2005, Klausner_2020
31 Tuite_2020 Mathematical modeling of COVID-19 transmission and mitigation strategies in the population of Ontario, Canada Ashleigh Tuite; David N Fisman; Amy L Greer 2020 2020-03-26 BioRxiv Y 10.1101/2020.03.24.20042705 e4pr78n0 0.616513 Mack_2007, Griffiths_2010, Amirov_2007, Coker_2007, Mwabu_2008 Milne_2020, Lai_S_2020, Kretzschmar_2020
32 Davies_2020 The effect of non-pharmaceutical interventions on COVID-19 cases, deaths and demand for hospital services in the UK: a modelling study Nicholas G Davies; Adam J Kucharski; Rosalind M Eggo; Amy Gimma; W. John Edmunds 2020 2020-04-06 BioRxiv Y 10.1101/2020.04.01.20049908 g0pxqqga 0.614782 Mwabu_2008, Coker_2007, Atkinson_2020, Mack_2007, Amirov_2007 Tuite_2020, Lai_S_2020, Gardner_2020
33 Zhang_2020 Estimating the presymptomatic transmission of COVID19 using incubation period and serial interval data Weituo Zhang 2020 2020-04-06 BioRxiv Y 10.1101/2020.04.02.20051318 nkhjona0 0.611444 Li_C_2018, Griette_2020, Pearson_2020, Kenah_2012 Li_P_2020
34 Donsimoni_2020 Should contact bans be lifted in Germany? A quantitative prediction of its effects Jean Roch Donsimoni; René Glawion; Bodo Plachter; Constantin Weiser; Klaus Wälde 2020 2020-04-14 BioRxiv Y 10.1101/2020.04.10.20060301 h86mpz6o 0.611255 Stenseth_2008, Mack_2007, Coker_2007, van_Helden_2013, Griffiths_2010 Pike_2020, Bayham_2020, Camitz_2006, Porco_2004
35 Banholzer_2020 Estimating the impact of non-pharmaceutical interventions on documented infections with COVID-19: A cross-country analysis Nicolas Banholzer; Eva van Weenen; Bernhard Kratzwald; Arne Seeliger; Daniel Tschernutter; Pierluigi Bottrighi; Alberto Cenedese; Joan Puig Salles; Stefan Feuerriegel; Werner Vach 2020 2020-04-21 BioRxiv Y 10.1101/2020.04.16.20062141 mds06a8i 0.609447 Fielding_2014, Mack_2007, Griffiths_2010, Kruk_2008, Buseh_2015
36 Nishiura_2020 Backcalculating the Incidence of Infection with COVID-19 on the Diamond Princess Nishiura, Hiroshi 2020 2020-02-29 None Y PMC7141332 32121356.0 10.3390/jcm9030657 5pqkuwb2 0.604223 Pearson_2020, Scheuerl_2020, Win_K_2011, batista_2020, Tomie_2020 Timoney_1984, Victor_2020, Fauci_2020, Yuan_2020
37 Koo_J_2020 Interventions to mitigate early spread of SARS-CoV-2 in Singapore: a modelling study Koo, Joel R; Cook, Alex R; Park, Minah; Sun, Yinxiaohe; Sun, Haoyang; Lim, Jue Tao; Tam, Clarence; Dickens, Borame L 2020 2020-03-23 PMC Y 10.1016/s1473-3099(20)30162-6 o3bp0837 0.604184 Pearson_2020, Win_K_2011, Mondor_2012, Pai_M_2006, Wu_Z_2013 Wang_2020, Kim_K_2020, Skums_2020
38 Rocklöv_2020 COVID-19 outbreak on the Diamond Princess cruise ship: estimating the epidemic potential and effectiveness of public health countermeasures Rocklöv, J; Sjödin, H; Wilder-Smith, A 2020 2020-02-28 None Y PMC7107563 32109273.0 10.1093/jtm/taaa030 7hkowm2y 0.602519 Lipsitch_2014, Mack_2007, UNKNOWN_2010, Griffiths_2010, Mondor_2012 Xu_P_2020, Marshall_2016, Ribeiro_2020, Kretzschmar_2020
39 Boldog_2020 Risk assessment of novel coronavirus COVID-19 outbreaks outside China Peter Boldog; Tamas Tekeli; Zsolt Vizi; Attila Denes; Ferenc Bartha; Gergely Rost 2020 2020-02-05 BioRxiv Y 10.1101/2020.02.04.20020503 ecu579el 0.602377 Buseh_2015, Griffiths_2010, Li_C_2018, Pai_M_2006, Zhou_2020 Rabaa_2015, He_J_2020, Yuan_2020
40 Jombart_2020 Inferring the number of COVID-19 cases from recently reported deaths Thibaut Jombart; Kevin van Zandvoort; Tim Russell; Christopher Jarvis; Amy Gimma; Sam Abbott; Samuel Clifford; Sebastian Funk; Hamish Gibbs; Yang Liu; Carl Pearson; Nikos Bosse; Rosalind M Eggo; Adam J Kucharski; John Edmunds 2020 2020-03-13 BioRxiv Y 10.1101/2020.03.10.20033761 tvxaxfqv 0.601714 Stenseth_2008, Nelson_2012, Nelson_2012, Vazquez_2020 Lachmann_2020, He_X_2020, magal_2020, Raheem_2020
41 Sugishita_2020 Insignificant effect of counter measure for coronavirus infectious disease -19 in Japan Yoshiyuki Sugishita; Junko Kurita; Tamie Sugawara; Yasushi Ohkusa 2020 2020-03-23 BioRxiv N 10.1101/2020.03.19.20037945 qljywb1t 0.596272 Abou-Hamdan_2018, Choudhury_2011, David_2013, Largo_2016, Gogineni_2015 Xia_W_2020, Marlier_2006, Nemoto_2014
42 Ge_Y_2020 Assessing the impact of a symptom-based mass screening and testing intervention during a novel infectious disease outbreak: The case of COVID-19 Yang Ge; Brian Kenneth McKay; Shengzhi Sun; Feng Zhang; Andreas Handel 2020 2020-02-23 BioRxiv Y 10.1101/2020.02.20.20025973 4gaa14ly 0.595880 van_der_Weijden_2010, Wu_Q_2014, Lauro_2020, Handel_2006, Pai_M_2006 Baier_2018, Moon_2017, Zingone_2020, Gostic_2020
43 Nishiura_2020 Serial interval of novel coronavirus (2019-nCoV) infections Hiroshi Nishiura; Natalie M Linton; Andrei R. Akhmetzhanov 2020 2020-02-13 BioRxiv Y 10.1101/2020.02.03.20019497 vspnuxz9 0.594497 David_2013, Abou-Hamdan_2018, Largo_2016, Choudhury_2011, Polverino_2017 Nishiura_2020, Xia_W_2020, Agoti_2019
44 Mizumoto_2020 Estimating the Asymptomatic Proportion of 2019 Novel Coronavirus onboard the Princess Cruises Ship, 2020 Kenji Mizumoto; Katsushi Kagaya; Alexander Zarebski; Gerardo Chowell 2020 2020-02-23 BioRxiv Y 10.1101/2020.02.20.20025866 atnz63pk 0.593224 Win_K_2011, Pai_M_2006, Li_C_2018, Choi_2017, Mondor_2012 Mizumoto_2020, Rabaa_2015, Grant_2019
45 Abouk_2020 The Immediate Effect of COVID-19 Policies on Social Distancing Behavior in the United States Rahi Abouk; Babak Heydari 2020 2020-04-10 BioRxiv N 10.1101/2020.04.07.20057356 2jd7aa2d 0.592027 Coker_2007, Griffiths_2010, Wei_B_2011, Martin_2008, Fielding_2014 Klausner_2020, Adolph_2020, Pike_2020, Milne_2020
46 Lee_V_2007 Effectiveness of Neuraminidase Inhibitors for Preventing Staff Absenteeism during Pandemic Influenza Lee, Vernon J.; Chen, Mark I. 2007 2007-03-23 None N PMC2725890 17552099.0 10.3201/eid1303.060309 rv59i9r1 0.591895 Atkinson_2020, To_K_2010, Apisarnthanarak_2007, Blendon_2008 Liu_X_2020, Lee_F_2011, Berry_2014, Enria_2008
47 Enanoria_2016 The Effect of Contact Investigations and Public Health Interventions in the Control and Prevention of Measles Transmission: A Simulation Study Enanoria, Wayne T. A.; Liu, Fengchen; Zipprich, Jennifer; Harriman, Kathleen; Ackley, Sarah; Blumberg, Seth; Worden, Lee; Porco, Travis C. 2016 2016-12-12 COMM-USE N PMC5152814 27941976.0 10.1371/journal.pone.0167160 cvmnmg04 0.590268 Griffiths_2010, Fielding_2014, Wei_B_2011, Apisarnthanarak_2007, Buseh_2015 Porco_2004, Gastañaduy_2019, Robert_2020
48 Quilty_2020 The effect of inter-city travel restrictions on geographical spread of COVID-19: Evidence from Wuhan, China Billy J Quilty; Charlie Diamond; Yang Liu; Hamish Gibbs; Timothy W Russell; Christopher I Jarvis; Kiesha Prem; Carl A B Pearson; Samuel J Clifford; Stefan Flasche; Petra Klepac; Rosalind M Eggo; Mark Jit 2020 2020-04-21 BioRxiv Y 10.1101/2020.04.16.20067504 6kiv3qi5 0.586837 Lim_T_2012, Fielding_2014, Lin_T_2011, Griffiths_2010, Pirie_2006
49 Hsieh_2005 Quarantine for SARS, Taiwan Hsieh, Ying-Hen; King, Chwan-Chuan; Chen, Cathy W. S.; Ho, Mei-Shang; Lee, Jen-Yu; Liu, Feng-Chi; Wu, Yi-Chun 2005 2005-02-23 PMC N PMC3320446 15752447.0 10.3201/eid1102.040190 64igat2s 0.586541 Deng_2015, Atkinson_2020, Mondor_2012, Lu_P_2016, Walker_2010 Xu_D_2005, Xing_2020, Rockx_2020, Li_C_2009
50 Yuan_2019 Assessing dengue control in Tokyo, 2014 Yuan, Baoyin; Lee, Hyojung; Nishiura, Hiroshi 2019 2019-06-21 COMM-USE N PMC6588210 31226116.0 10.1371/journal.pntd.0007468 nx2wrguu 0.586196 Li_C_2018, Mondor_2012, Polverino_2017, Wu_Q_2014, Chen_2018 Yuan_2020, Poletti_2011, Rabaa_2015, dos_Santos_2018
51 Yang_2011 Analysis of CDC social control measures using an agent-based simulation of an influenza epidemic in a city Yang, Yong; Atkinson, Peter M; Ettema, Dick 2011 2011-07-18 COMM-USE N PMC3151229 21767379.0 10.1186/1471-2334-11-199 grmef7ab 0.586036 Li_C_2018, Zhou_2020, Mondor_2012, Wei_B_2011, Griffiths_2010 dos_Santos_2018, Enanoria_2016, Porco_2004, Milne_2020
52 McBryde_2006 Bayesian modelling of an epidemic of severe acute respiratory syndrome McBryde, E. S.; Gibson, G.; Pettitt, A. N.; Zhang, Y.; Zhao, B.; McElwain, D. L. S. 2006 2006-04-08 PMC N PMC7089340 16802088.0 10.1007/s11538-005-9005-4 hd079dox 0.581786 Muniz-Rodriguez_2020, Choi_2017, Win_K_2011, Pearson_2020 Eifan_2017, Virlogeux_2016, Loubet_2017
53 Adams_2020 Quantifying the roles of vomiting, diarrhea, and residents vs. staff in norovirus transmission in U.S. nursing home outbreaks Adams, Carly; Young, David; Gastañaduy, Paul A.; Paul, Prabasaj; Marsh, Zach; Hall, Aron J.; Lopman, Benjamin A. 2020 2020-03-25 None N PMC7135310 32210423.0 10.1371/journal.pcbi.1007271 q6jh7oaf 0.581503 Choi_2017, Win_K_2011, Pearson_2020, Lim_D_2017, Muniz-Rodriguez_2020 Adams_2019, Turcios-Ruiz_2008, Kabwama_2017, Timoney_1984
54 Fukutome_2013 Mathematical Modeling of Severe Acute Respiratory Syndrome Nosocomial Transmission in Japan: The Dynamics of Incident Cases and Prevalent Cases Fukutome, Ayako; Watashi, Koichi; Kawakami, Norito; Ishikawa, Hirofumi 2013 2013-11-14 PMC N PMC7168393 17895599.0 10.1111/j.1348-0421.2007.tb03978.x 4bd0ph43 0.579773 Li_C_2018, Scheuerl_2020, Tomie_2020, Mondor_2012, Chen_2018
55 Burns_2020 Symptom-Based Isolation Policies: Evidence from a Mathematical Model of Outbreaks of Influenza and COVID-19 Adam Burns; Alexander Gutfraind 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.26.20044750 d13j2pt5 0.576450 Mack_2007, Stenseth_2008, Apisarnthanarak_2007, Coker_2007, Lu_J_2020 Baier_2018, Glennon_2020, Kretzschmar_2020
56 Tariq_2020 Real-time monitoring the transmission potential of COVID-19 in Singapore, February 2020 Amna Tariq; Yiseul Lee; Kimberlyn Roosa; Seth Blumberg; Ping Yan; Stefan Ma; Gerardo Chowell 2020 2020-02-25 BioRxiv Y 10.1101/2020.02.21.20026435 vw3h1m5y 0.574160 Li_C_2018, Mondor_2012, Pearson_2020, Tao_Y_2020, Scheuerl_2020 Yuan_2020, Hou_J_2020, Siraj_2020, Roosa_2020
57 Anderson_2020 How will country-based mitigation measures influence the course of the COVID-19 epidemic? Anderson, Roy M; Heesterbeek, Hans; Klinkenberg, Don; Hollingsworth, T Déirdre 2020 2020-03-27 None Y PMC7158572 32164834.0 10.1016/s0140-6736(20)30567-5 lbcxl6w9 0.573489 Mack_2007, Stenseth_2008, Looker_2006, Kruk_2008, Li_C_2018 Yuan_2020, He_J_2020, Milne_2020
58 Bondy_2009 Quantifying the impact of community quarantine on SARS transmission in Ontario: estimation of secondary case count difference and number needed to quarantine Bondy, Susan J; Russell, Margaret L; Laflèche, Julie ML; Rea, Elizabeth 2009 2009-12-24 COMM-USE N PMC2808319 20034405.0 10.1186/1471-2458-9-488 73yg1bi1 0.571768 Coker_2007, Stenseth_2008, Griffiths_2010, Mwabu_2008, Mack_2007 Gupta_2005, Hsieh_2007, Ooi_P_2005, Hsieh_2005
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65 Chen_2018 The Effect of School Closure on Hand, Foot, and Mouth Disease Transmission in Singapore: A Modeling Approach Chen, Yirong; Badaruddin, Hishamuddin; Lee, Vernon J.; Cutter, Jeffery; Cook, Alex R. 2018 2018-10-22 COMM-USE N PMC6283473 30350767.0 10.4269/ajtmh.18-0099 mkv1jc7u 0.563451 Griffiths_2010, Mondor_2012, Fielding_2014, Atkinson_2020, Wei_B_2011 Yang_2017, Wu_P_2018, Hii_Y_2011
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69 Peak_2020 Modeling the Comparative Impact of Individual Quarantine vs. Active Monitoring of Contacts for the Mitigation of COVID-19 Corey M Peak; Rebecca Kahn; Yonatan H Grad; Lauren M Childs; Ruoran Li; Marc Lipsitch; Caroline O Buckee 2020 2020-03-08 BioRxiv Y 10.1101/2020.03.05.20031088 e2p46wa8 0.559572 Coker_2007, Mack_2007, Mwabu_2008, Stenseth_2008, Zhou_2020 Kretzschmar_2020, Dénes_2019, Yuan_2020, Safi_2011
70 Tsang_2020 Effect of changing case definitions for COVID-19 on the epidemic curve and transmission parameters in mainland China: a modelling study Tsang, Tim K; Wu, Peng; Lin, Yun; Lau, Eric H Y; Leung, Gabriel M; Cowling, Benjamin J 2020 2020-04-21 PMC Y 10.1016/s2468-2667(20)30089-x bctb0ewu 0.558118 Lipsitch_2014, Murray_2017, UNKNOWN_2010, Rodier_2007, Stenseth_2008
71 Adams_2019 Quantifying the roles of vomiting, diarrhea, and residents vs. staff in norovirus transmission in U.S. nursing home outbreaks Carly Adams; David Young; Paul A Gastañaduy; Prabasaj Paul; Zach Marsh; Aron J Hall; Benjamin A Lopman 2019 2019-07-18 BioRxiv N 10.1101/707356 ghihvjj3 0.554644 Atkinson_2020, Mack_2007, Blendon_2008, Amirov_2007, Ly_S_2007 Adams_2020, Turcios-Ruiz_2008, Kabwama_2017, Timoney_1984
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73 Bitzegeio_2020 Two measles clusters in connection with short inner-European air travels indicating impediments to effective measles control: A cluster analysis Bitzegeio, Julia; Bukowski, Britta; Hausner, Marius; Sissolak, Dagmar; Rasmussen, Lasse D.; Andersen, Peter H.; Katz, Katharina; Englund, Hélène; Hagstam, Per; Sagebiel, Daniel; Werber, Dirk 2020 2020-02-29 PMC N PMC7110584 31786281.0 10.1016/j.tmaid.2019.101542 qmh9l7qy 0.544180 Fielding_2014, Griffiths_2010, Buseh_2015, Kruk_2008, Atkinson_2020 Otomaru_2019, Robert_2020, Tuite_2020, dos_Santos_2018
74 Zhang_2020 Age profile of susceptibility, mixing, and social distancing shape the dynamics of the novel coronavirus disease 2019 outbreak in China Juanjuan Zhang; Maria Litvinova; Yuxia Liang; Yan Wang; Wei Wang; Shanlu Zhao; Qianhui Wu; Stefano Merler; Cecile Viboud; Alessandro Vespignani; Marco Ajelli; Hongjie Yu 2020 2020-03-20 BioRxiv Y 10.1101/2020.03.19.20039107 y8o5j2be 0.542659 Mack_2007, Griffiths_2010, Rusoke-Dierich_2018, Blendon_2008, Buseh_2015 Kretzschmar_2020, Hilton_2020, Xia_W_2020, Yuan_2020
75 Ejima_2020 Inferring Timing of Infection Using Within-host SARS-CoV-2 Infection Dynamics Model: Are "Imported Cases" Truly Imported? Keisuke Ejima; Kwang Su Kim; Yusuke Ito; Shoya Iwanami; Hirofumi Ohashi; Yoshiki Koizumi; Koichi Watashi; Ana I Bento; Kazuyuki Aihara; Shingo Iwami 2020 2020-03-31 BioRxiv Y 10.1101/2020.03.30.20040519 gb9rkv9c 0.541580 Pai_M_2006, Polverino_2017, Mondor_2012, Lumby_2018, Li_C_2018 Kretzschmar_2020, Nishiura_2007, Yuan_2020
76 Prem_2020 The effect of control strategies to reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China: a modelling study Prem, Kiesha; Liu, Yang; Russell, Timothy W; Kucharski, Adam J; Eggo, Rosalind M; Davies, Nicholas; Jit, Mark; Klepac, Petra; Flasche, Stefan; Clifford, Samuel; Pearson, Carl A B; Munday, James D; Abbott, Sam; Gibbs, Hamish; Rosello, Alicia; Quilty, Billy J; Jombart, Thibaut; Sun, Fiona; Diamond, Charlie; Gimma, Amy; van Zandvoort, Kevin; Funk, Sebastian; Jarvis, Christopher I; Edmunds, W John; Bosse, Nikos I; Hellewell, Joel 2020 2020-03-25 PMC Y 10.1016/s2468-2667(20)30073-6 rvxkt60m 0.540912 Griffiths_2010, Rodier_2007, UNKNOWN_2010, Mondor_2012, Fielding_2014 Prem_2020, Kraemer_2020, Zhang_2020, Yuan_2020
77 Keeling_2020 The Efficacy of Contact Tracing for the Containment of the 2019 Novel Coronavirus (COVID-19). Matt J Keeling; T. Deirdre Hollingsworth; Jonathan M Read 2020 2020-02-17 BioRxiv Y 10.1101/2020.02.14.20023036 rgzmpoxv 0.537631 Mack_2007, Polverino_2017, Li_C_2018, Stenseth_2008, Rusoke-Dierich_2018 Kretzschmar_2020, Xia_W_2020, de_Sousa_2014, Grant_2019
78 Nishiura_2009 Quarantine for pandemic influenza control at the borders of small island nations Nishiura, Hiroshi; Wilson, Nick; Baker, Michael G 2009 2009-03-11 COMM-USE N PMC2670846 19284571.0 10.1186/1471-2334-9-27 i2acghft 0.537509 Mondor_2012, Stenseth_2008, Mack_2007, Rusoke-Dierich_2018, Cinti_2005 Yuan_2020, Poletti_2011, Rabaa_2015
79 Chinazzi_2020 The effect of travel restrictions on the spread of the 2019 novel coronavirus (2019-nCoV) outbreak Matteo Chinazzi; Jessica T. Davis; Marco Ajelli; Corrado Gioannini; Maria Litvinova; Stefano Merler; Ana Pastore y Piontti; Luca Rossi; Kaiyuan Sun; Cécile Viboud; Xinyue Xiong; Hongjie Yu; M. Elizabeth Halloran; Ira M. Longini; Alessandro Vespignani 2020 2020-02-11 BioRxiv Y 10.1101/2020.02.09.20021261 f87h5qh6 0.537236 Griffiths_2010, Chinazzi_2020, Fielding_2014, Mondor_2012, Pirie_2006 Chinazzi_2020, He_J_2020, Teles_2020, Ji_X_2020
80 Linton_2020 Incubation Period and Other Epidemiological Characteristics of 2019 Novel Coronavirus Infections with Right Truncation: A Statistical Analysis of Publicly Available Case Data Natalie M. Linton; Tetsuro Kobayashi; Yichi Yang; Katsuma Hayashi; Andrei R. Akhmetzhanov; Sung-mok Jung; Baoyin Yuan; Ryo Kinoshita; Hiroshi Nishiura 2020 2020-01-28 BioRxiv Y 10.1101/2020.01.26.20018754 ykofrn9i 0.536286 batista_2020, Kenah_2012, Linton_2020, Mondor_2012 Linton_2020, Xia_W_2020, Jing_2020
81 Bogaards_2007 The potential of targeted antibody prophylaxis in SARS outbreak control: A mathematic analysis Bogaards, Johannes Antonie; Putter, Hein; Jan Weverling, Gerrit; ter Meulen, Jan; Goudsmit, Jaap 2007 2007-03-31 PMC N PMC7106269 17298911.0 10.1016/j.tmaid.2006.01.007 rafcdzhm 0.533807 Apisarnthanarak_2007, Atkinson_2020, Cinti_2005, Mondor_2012, Afilalo_2012 Baier_2018, Enria_2008
82 Xu_P_2020 Transmission routes of Covid-19 virus in the Diamond Princess Cruise ship Pengcheng Xu; Hua Qian; Te Miao; Hui-ling Yen; Hongwei Tan; Benjamin J. Cowling; Yuguo J Li 2020 2020-04-14 BioRxiv Y 10.1101/2020.04.09.20059113 00rq0ggi 0.532161 UNKNOWN_2010, Mondor_2012, Atkinson_2020, Pirie_2006, Mack_2007 Yuan_2020, Sekizuka_2020, Ribeiro_2020, Xia_W_2020
83 Kucharski_2020 Early dynamics of transmission and control of COVID-19: a mathematical modelling study Adam J Kucharski; Timothy W Russell; Charlie Diamond; Yang Liu; John Edmunds; Sebastian Funk; Rosalind M Eggo 2020 2020-02-02 BioRxiv Y 10.1101/2020.01.31.20019901 gmi1ewc2 0.528219 Mondor_2012, Pearson_2020, Li_C_2018, Blumberg_2020, Chen_2018 Kretzschmar_2020, Kucharski_2020, Yuan_2020, Xia_W_2020
84 Goldsztejn_2020 Public policy and economic dynamics of COVID-19 spread: a mathematical modeling study Uri Goldsztejn; David Schwartzman; Arye Nehorai 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.13.20062802 r044iimd 0.527930 Mack_2007, Stenseth_2008, Coker_2007, Griffiths_2010, Kruk_2008
85 Nishiura_2014 Cost-effective length and timing of school closure during an influenza pandemic depend on the severity Nishiura, Hiroshi; Ejima, Keisuke; Mizumoto, Kenji; Nakaoka, Shinji; Inaba, Hisashi; Imoto, Seiya; Yamaguchi, Rui; Saito, Masaya M 2014 2014-01-21 COMM-USE N PMC3901768 24447310.0 10.1186/1742-4682-11-5 aj1ufof6 0.525782 Walker_2010, Cinti_2005, Atkinson_2020, UNKNOWN_2010, Stenseth_2008 Liu_F_2014, Nishiura_2007, Kretzschmar_2020, Kim_S_2020
86 Feehan_2020 Quantifying interpersonal contact in the United States during the spread of COVID-19: first results from the Berkeley Interpersonal Contact Study Dennis Feehan; Ayesha Mahmud 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.13.20064014 3e4hdfir 0.525162 Mack_2007, Coker_2007, Stenseth_2008, Griffiths_2010, Looker_2006
87 Wickramage_2019 Airport Entry and Exit Screening during the Ebola Virus Disease Outbreak in Sierra Leone, 2014 to 2016 Wickramage, Kolitha 2019 2019-10-20 COMM-USE N PMC6930773 31915689.0 10.1155/2019/3832790 aidohvlu 0.524814 Lim_T_2012, Esswein_2004, Ma_X_2020, Rodier_2007 Quilty_2020, Kuan_2012, Turner_2010, Ribeiro_2020
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89 Lasher_2004 Contacting passengers after exposure to measles on an international flight: Implications for responding to new disease threats and bioterrorism. Lasher, Lara E.; Ayers, Tracy L.; Amornkul, Pauli N.; Nakatab, Michele N.; Effler, Paul V. 2004 2004-09-01 PMC N PMC1497663 15313108.0 10.1016/j.phr.2004.07.002 41otw3ly 0.523931 Rodier_2007, Esswein_2004, Murray_2017, Lim_T_2012, UNKNOWN_2010 Wilder-Smith_2006, Racelis_2015, Segura_2019
90 Malone_2009 U.S. airport entry screening in response to pandemic influenza: Modeling and analysis Malone, John D.; Brigantic, Robert; Muller, George A.; Gadgil, Ashok; Delp, Woody; McMahon, Benjamin H.; Lee, Russell; Kulesz, Jim; Mihelic, F. Matthew 2009 2009-07-31 PMC N 19717097.0 10.1016/j.tmaid.2009.02.006 bhgw44iv 0.522827 Lim_T_2012, Pearson_2020, Win_K_2011, Pirie_2006, Wu_Z_2013 Kuan_2012, Ribeiro_2020, Chung_2015
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92 Odendaal_2020 Method for Active Pandemic Curve Management (MAPCM) Willem G Odendaal 2020 2020-04-13 BioRxiv Y 10.1101/2020.04.06.20055699 a6ldr0mn 0.521879 Coker_2007, Mack_2007, Stenseth_2008, Mwabu_2008, van_der_Weijden_2010 Djidjou-Demasse_2020, Nicolau_2020, Heymann_2004
93 Li_R_2020 Substantial undocumented infection facilitates the rapid dissemination of novel coronavirus (COVID-19) Ruiyun Li; Sen Pei; Bin Chen; Yimeng Song; Tao Zhang; Wan Yang; Jeffrey Shaman 2020 2020-02-17 BioRxiv Y 10.1101/2020.02.14.20023127 3nipr212 0.521859 Brucker_2020, Fauci_2006, Pai_M_2006, Mack_2007, Karlsson_2012 Li_R_2020, Rabaa_2015, Agoti_2019, Rockx_2011
94 Domenico_2020 Expected impact of lockdown in Île-de-France and possible exit strategies Laura Di Domenico; Giulia Pullano; Chiara E. Sabbatini; Pierre-Yves Boëlle; Vittoria Colizza 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.13.20063933 xd82jjun 0.520921 Mack_2007, Mwabu_2008, Wei_B_2011, Zhou_2020, Coker_2007
95 Siedner_2020 Social distancing to slow the U.S. COVID-19 epidemic: an interrupted time-series analysis Mark J Siedner; Guy Harling; Zahra Reynolds; Rebecca F Gilbert; Atheendar Venkataramani; Alexander C Tsai 2020 2020-04-08 BioRxiv Y 10.1101/2020.04.03.20052373 ls408b2b 0.518460 Griffiths_2010, Mondor_2012, Wei_B_2011, Knapp_2008, Fielding_2014 Adolph_2020, Klausner_2020, Pike_2020, Abouk_2020
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97 Gardner_2020 Intervention strategies against COVID-19 and their estimated impact on Swedish healthcare capacity Jasmine M Gardner; Lander Willem; Wouter van der Wijngaart; Shina Caroline Lynn Kamerlin; Nele Brusselaers; Peter Kasson 2020 2020-04-15 BioRxiv Y 10.1101/2020.04.11.20062133 ass2u6y8 0.516645 Griffiths_2010, Fielding_2014, Rodier_2007, Atkinson_2020, Amirov_2007 Davies_2020, Moss_2020, Yang_2020
98 Haber_2007 Effectiveness of Interventions to Reduce Contact Rates during a Simulated Influenza Pandemic Haber, Michael J.; Shay, Davis K.; Davis, Xiaohong M.; Patel, Rajan; Jin, Xiaoping; Weintraub, Eric; Orenstein, Evan; Thompson, William W. 2007 2007-04-23 PMC N PMC2725959 17553273.0 10.3201/eid1304.060828 ehp0q0ry 0.516449 Atkinson_2020, Amirov_2007, Blendon_2008, Mack_2007, Stenseth_2008 Enanoria_2016, Porco_2004, Scott_2019, Shetty_2019
99 Kang_2016 Contact Tracing for Imported Case of Middle East Respiratory Syndrome, China, 2015 Kang, Min; Song, Tie; Zhong, Haojie; Hou, Jie; Wang, Jun; Li, Jiansen; Wu, Jie; He, Jianfeng; Lin, Jinyan; Zhang, Yonghhui 2016 2016-09-23 PMC N PMC4994337 27532887.0 10.3201/eid2209.152116 68z2pxfz 0.516076 Deng_2015, Kim_D_2016, Lu_P_2016, Brucker_2020 Mollers_2015, WANG_2016, Yavarian_2015, Yang_2015
100 Eichner_2009 Small islands and pandemic influenza: Potential benefits and limitations of travel volume reduction as a border control measure Eichner, Martin; Schwehm, Markus; Wilson, Nick; Baker, Michael G 2009 2009-09-29 COMM-USE N PMC2761921 19788751.0 10.1186/1471-2334-9-160 qf8fxbpt 0.515867 Mack_2007, Cinti_2005, UNKNOWN_2010, Walker_2010, Santos-Preciado_2009 Camitz_2006, Boyd_2017, Wood_2007, Ribeiro_2020
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102 Chang_2020 Modeling the impact of human mobility and travel restrictions on the potential spread of SARS-CoV-2 in Taiwan Meng-Chun Chang; Rebecca Kahn; Yu-An Li; Cheng-Sheng Lee; Caroline O Buckee; Hsiao-Han Chang 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.07.20053439 7vh5ipro 0.515531 Zhou_2020, Mack_2007, Stenseth_2008, Griffiths_2010, Fielding_2014 Liu_H_2020, Kraemer_2020, Camitz_2006, Bjørnstad_2019
103 Ward_2010 Outbreaks of Pandemic (H1N1) 2009 and Seasonal Influenza A (H3N2) on Cruise Ship Ward, Kate A.; Armstrong, Paul; McAnulty, Jeremy M.; Iwasenko, Jenna M.; Dwyer, Dominic E. 2010 2010-11-23 PMC N PMC3294517 21029531.0 10.3201/eid1611.100477 ks1l11ot 0.514603 Walker_2010, Lu_P_2016, Yasui_2016, Hong-Wu_2015 Monamele_2017, Li_H_2015, Van_Hoeven_2009
104 Liu_Z_2020 Predicting the cumulative number of cases for the COVID-19 epidemic in China from early data Zhihua Liu; pierre magal; Ousmane Seydi; Glenn Webb 2020 2020-03-13 BioRxiv Y 10.1101/2020.03.11.20034314 pvb5c4ih 0.514424 Guery_2014, Mondor_2012, Li_C_2018, Zhou_2020 magal_2020, Lin_Q_2020, He_X_2020, Xu_B_2020
105 Lai_S_2020 Effect of non-pharmaceutical interventions for containing the COVID-19 outbreak in China Shengjie Lai; Nick W Ruktanonchai; Liangcai Zhou; Olivia Prosper; Wei Luo; Jessica R Floyd; Amy Wesolowski; Mauricio Santillana; Chi Zhang; Xiangjun Du; Hongjie Yu; Andrew J Tatem 2020 2020-03-06 BioRxiv Y 10.1101/2020.03.03.20029843 jtwb17u8 0.512152 Mondor_2012, Stenseth_2008, Griffiths_2010, Zhou_2020, Buseh_2015 Yuan_2020, He_J_2020, Filho_2020
106 Pung_2020 Investigation of three clusters of COVID-19 in Singapore: implications for surveillance and response measures Pung, Rachael; Chiew, Calvin J; Young, Barnaby E; Chin, Sarah; Chen, Mark I-C; Clapham, Hannah E; Cook, Alex R; Maurer-Stroh, Sebastian; Toh, Matthias P H S; Poh, Cuiqin; Low, Mabel; Lum, Joshua; Koh, Valerie T J; Mak, Tze M; Cui, Lin; Lin, Raymond V T P; Heng, Derrick; Leo, Yee-Sin; Lye, David C; Lee, Vernon J M; Kam, Kai-qian; Kalimuddin, Shirin; Tan, Seow Yen; Loh, Jiashen; Thoon, Koh Cheng; Vasoo, Shawn; Khong, Wei Xin; Suhaimi, Nur-Afidah; Chan, Sherlynn JH; Zhang, Emma; Oh, Olivia; Ty, Albert; Tow, Charlene; Chua, Yi Xian; Chaw, Wei Liang; Ng, Yixiang; Abdul-Rahman, Farid; Sahib, Shafiq; Zhao, Zheng; Tang, Cheryl; Low, Constance; Goh, Ee Hui; Lim, Georgina; Hou, Yan'an; Roshan, Imran; Tan, James; Foo, Kelly; Nandar, Khine; Kurupatham, Lalitha; Chan, Pei Pei; Raj, Pream; Lin, Yijun; Said, Zubaidah; Lee, Anne; See, Cherie; Markose, Jessey; Tan, Joanna; Chan, Guanhao; See, Wanhan; Peh, Xinyi; Cai, Vincent; Chen, Wen Kai; Li, Zongbin; Soo, Roy; Chow, Angela LP; Wei, Wycliffe; Farwin, Aysha; Ang, Li Wei 2020 2020-04-03 PMC Y 32192580.0 10.1016/s0140-6736(20)30528-6 0hnh4n9e 0.511080 Mondor_2012, Griffiths_2010, Rusoke-Dierich_2018, UNKNOWN_2010, Fielding_2014 Xu_D_2005, Xing_2020, Wang_2020
107 James_2020 Suppression and Mitigation Strategies for Control of COVID-19 in New Zealand Alex James; Shaun C Hendy; Michael J Plank; Nicholas Steyn 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.26.20044677 gc5ieskk 0.510628 Mack_2007, Coker_2007, Mwabu_2008, Stenseth_2008, Kruk_2008 Yuan_2020, Yang_2020, Yang_2020, Heymann_2004
108 Anzai_2020 Assessing the impact of reduced travel on exportation dynamics of novel coronavirus infection (COVID-19) Asami Anzai; Tetsuro Kobayashi; Natalie M. Linton; Ryo Kinoshita; Katsuma Hayashi; Ayako Suzuki; Yichi Yang; Sungmok Jung; Takeshi Miyama; Andrei R. Akhmetzhanov; Hiroshi Nishiura 2020 2020-02-17 BioRxiv Y 10.1101/2020.02.14.20022897 j1yqn9xg 0.509484 Pearson_2020, Li_C_2018, Scheuerl_2020, batista_2020, Tomie_2020 Anzai_2020, Chinazzi_2020, Chinazzi_2020, Xia_W_2020
109 Anzai_2020 Assessing the Impact of Reduced Travel on Exportation Dynamics of Novel Coronavirus Infection (COVID-19) Anzai, Asami; Kobayashi, Tetsuro; Linton, M. Natalie; Kinoshita, Ryo; Hayashi, Katsuma; Suzuki, Ayako; Yang, Yichi; Jung, Sung-mok; Miyama, Takeshi; Akhmetzhanov, R. Andrei; Nishiura, Hiroshi 2020 2020-01-01 COMM-USE Y PMC7073579 32102279.0 10.3390/jcm9020601 imexhlwn 0.505062 Li_C_2018, Pearson_2020, Scheuerl_2020, Mondor_2012, batista_2020 Anzai_2020, Chinazzi_2020, Chinazzi_2020, Xia_W_2020
110 Ma_S_2020 Epidemiological parameters of coronavirus disease 2019: a pooled analysis of publicly reported individual data of 1155 cases from seven countries Shujuan Ma; Jiayue Zhang; Minyan Zeng; Qingping Yun; Wei Guo; Yixiang Zheng; Shi Zhao; Maggie H Wang; Zuyao Yang 2020 2020-03-24 BioRxiv Y 10.1101/2020.03.21.20040329 56zhxd6e 0.503493 Polverino_2017, Pearson_2020, Mondor_2012, batista_2020, Kenah_2012 Lescure_2020, Xia_W_2020, Klem_2014
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130 Ferretti_2020 Quantifying SARS-CoV-2 transmission suggests epidemic control with digital contact tracing Ferretti, Luca; Wymant, Chris; Kendall, Michelle; Zhao, Lele; Nurtay, Anel; Abeler-Dörner, Lucie; Parker, Michael; Bonsall, David; Fraser, Christophe 2020 2020-03-31 None Y PMC7164555 32234805.0 10.1126/science.abb6936 zueghgx5 0.488546 Mack_2007, Coker_2007, Stenseth_2008, Polverino_2017, Looker_2006
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132 Lee_B_2010 Simulating School Closure Strategies to Mitigate an Influenza Epidemic Lee, Bruce Y.; Brown, Shawn T.; Cooley, Philip; Potter, Maggie A.; Wheaton, William D.; Voorhees, Ronald E.; Stebbins, Samuel; Grefenstette, John J.; Zimmer, Shanta M.; Zimmerman, Richard; Assi, Tina-Marie; Bailey, Rachel R.; Wagener, Diane K.; Burke, Donald S. 2010 2010-05-01 PMC N PMC2901099 20035236.0 10.1097/phh.0b013e3181ce594e qac68abi 0.487241 Atkinson_2020, Griffiths_2010, UNKNOWN_2010, Mack_2007, Amirov_2007 Mniszewski_2008, Nishiura_2014, Mao_L_2011
133 Ganem_2020 The impact of early social distancing at COVID-19 Outbreak in the largest Metropolitan Area of Brazil. Fabiana Ganem; Fabio Macedo Mendes; Silvano Barbosa Oliveira; Victor Bertolo Gomes Porto; Wildo Araujo; Helder Nakaya; Fredi A Diaz-Quijano; Julio Croda 2020 2020-04-08 BioRxiv Y 10.1101/2020.04.06.20055103 9bi6pobg 0.486686 Fielding_2014, Griffiths_2010, Buseh_2015, Coelho_2020 Coelho_2020, Filho_2020, Chin_2019, Campbell_2020
134 Prem_2020 The effect of control strategies that reduce social mixing on outcomes of the COVID-19 epidemic in Wuhan, China Kiesha Prem; Yang Liu; Tim Russell; Adam J Kucharski; Rosalind M Eggo; Nicholas Davies; Mark Jit; Petra Klepac 2020 2020-03-12 BioRxiv Y 10.1101/2020.03.09.20033050 fn9b7adi 0.486532 Mondor_2012, Li_C_2018, Griffiths_2010, Buseh_2015, Tomie_2020 Kraemer_2020, Yuan_2020, Prem_2020, Hou_J_2020
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139 Kucharski_2020 Early dynamics of transmission and control of COVID-19: a mathematical modelling study Kucharski, Adam J; Russell, Timothy W; Diamond, Charlie; Liu, Yang; Edmunds, John; Funk, Sebastian; Eggo, Rosalind M; Sun, Fiona; Jit, Mark; Munday, James D; Davies, Nicholas; Gimma, Amy; van Zandvoort, Kevin; Gibbs, Hamish; Hellewell, Joel; Jarvis, Christopher I; Clifford, Sam; Quilty, Billy J; Bosse, Nikos I; Abbott, Sam; Klepac, Petra; Flasche, Stefan 2020 2020-03-11 PMC Y 10.1016/s1473-3099(20)30144-4 uvavdk6n 0.482281 Lim_T_2012, Ma_X_2020, Rodier_2007, Georgiev_2009, Lin_Q_2020 Kucharski_2020, Kretzschmar_2020, Hou_J_2020, Yuan_2020
140 Wang_2020 Phase-adjusted estimation of the number of Coronavirus Disease 2019 cases in Wuhan, China Wang, Huwen; Wang, Zezhou; Dong, Yinqiao; Chang, Ruijie; Xu, Chen; Yu, Xiaoyue; Zhang, Shuxian; Tsamlag, Lhakpa; Shang, Meili; Huang, Jinyan; Wang, Ying; Xu, Gang; Shen, Tian; Zhang, Xinxin; Cai, Yong 2020 2020-01-01 COMM-USE Y PMC7039910 32133152.0 10.1038/s41421-020-0148-0 bd8onwue 0.480117 Tomie_2020, Li_C_2018, Mondor_2012, Xu_L_2020, Pai_M_2006 Wang_2020, Wang_2020, Liu_T_2020
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142 Cheng_2020 High transmissibility of COVID-19 near symptom onset Hao-Yuan Cheng; Shu-Wan Jian; Ding-Ping Liu; Ta-Chou Ng; Wan-Ting Huang; Hsien-Ho Lin 2020 2020-03-19 BioRxiv Y 10.1101/2020.03.18.20034561 xsqgrd5l 0.473151 Rossi_2020, Muniz-Rodriguez_2020, Choi_2017, Muniz-Rodriguez_2020, Russell_2020 Xia_W_2020, Marchese-Ragona_2020, Chen_2020, Wang_2020
143 Wang_2020 Phase adjusted estimation of the number of 2019 novel coronavirus cases in Wuhan, China Huwen Wang; Zezhou Wang; Yinqiao Dong; Ruijie Chang; Chen Xu; Xiaoyue Yu; Shuxian Zhang; Lhakpa Tsamlag; Meili Shang; Jinyan Huang; Ying Wang; Gang Xu; Tian Shen; Xinxin Zhang; Yong Cai 2020 2020-02-23 BioRxiv Y 10.1101/2020.02.18.20024281 uo7fb10k 0.472245 Tomie_2020, Li_C_2018, Mondor_2012, Xu_L_2020, Pai_M_2006 Wang_2020, Wang_2020, Liu_T_2020
144 Malik_2020 COVID-19 related social distancing measures and reduction in city mobility Amyn Abdul Malik; Chandra Couzens; Saad B Omer 2020 2020-04-06 BioRxiv Y 10.1101/2020.03.30.20048090 71b6ai77 0.471727 Pearson_2020, Muniz-Rodriguez_2020, Win_K_2011, Griffiths_2010 Liu_H_2020, Soucy_2020, dos_Santos_2018, Milne_2020
145 Abbott_2020 The transmissibility of novel Coronavirus in the early stages of the 2019-20 outbreak in Wuhan: Exploring initial point-source exposure sizes and durations using scenario analysis Abbott, Sam; Hellewell, Joel; Munday, James; Funk, Sebastian 2020 2020-02-03 COMM-USE Y PMC7156988 10.12688/wellcomeopenres.15718.1 2wof34vi 0.469606 Kenah_2012, Polverino_2017, Li_C_2018, Lloyd-Smith_2007, Welch_2011
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151 Jackson_2020 Effects of weather-related social distancing on city-scale transmission of respiratory viruses Michael L Jackson; Gregory R Hart; Denise J McCulloch; Amanda Adler; Elisabeth Brandstetter; Kairsten Fay; Peter Han; Kirsten Lacombe; Jover Lee; Thomas Sibley; Deborah A Nickerson; Mark Rieder; Lea Starita; Janet A Englund; Trevor Bedford; Helen Chu; Michael Famulare 2020 2020-03-03 BioRxiv N 10.1101/2020.03.02.20027599 ngbfiws5 0.466604 Deng_2015, Atkinson_2020, Afilalo_2012, Brucker_2020, Mondor_2012 Scott_2019, Zhang_2019, Firestone_2012, dos_Santos_2018
152 Bernstein_2020 Further analysis of the impact of distancing upon the COVID-19 pandemic Daniel J. Bernstein 2020 2020-04-16 BioRxiv Y 10.1101/2020.04.14.20048025 qjf23a7e 0.466402 Mooney_2013, Lipsitch_2014, Mack_2007, UNKNOWN_2010, Stenseth_2008
153 Park_2020 The time scale of asymptomatic transmission affects estimates of epidemic potential in the COVID-19 outbreak Sang Woo Park; Daniel M Cornforth; Jonathan Dushoff; Joshua S Weitz 2020 2020-03-13 BioRxiv Y 10.1101/2020.03.09.20033514 50zrnau8 0.465431 Li_C_2018, O'Dea_2010, Welch_2011, Wu_Q_2014, Sadun_2020 Kucharski_2015, Kretzschmar_2020, Aguilar_2020, Hellewell_2020
154 Eastman_2020 Mathematical modeling of COVID-19 containment strategies with considerations for limited medical resources Brydon Eastman; Cameron Meaney; Michelle Przedborski; Mohammad Kohandel 2020 2020-04-22 BioRxiv Y 10.1101/2020.04.17.20068585 51g3vhcx 0.463775 Coker_2007, Mack_2007, Stenseth_2008, Mwabu_2008, Martin_2008
155 Wang_2020 Impact of Social Distancing Measures on COVID-19 Healthcare Demand in Central Texas Xutong Wang; Remy F Pasco; Zhanwei Du; Michaela Petty; Spencer J Fox; Alison P Galvani; Michael Pignone; S. Claiborne Johnston; Lauren Ancel Meyers 2020 2020-04-22 BioRxiv Y 10.1101/2020.04.16.20068403 n0nch8he 0.459929 Atkinson_2020, Amirov_2007, Griffiths_2010, Coker_2007, Fielding_2014
156 Eilersen_2020 Estimating cost-benefit of quarantine length for Covid-19 mitigation Andreas Eilersen; Kim Sneppen 2020 2020-04-14 BioRxiv Y 10.1101/2020.04.09.20059790 b8a78ym6 0.459784 Mack_2007, Stenseth_2008, Coker_2007, Mwabu_2008, Martin_2008 Gupta_2005, Yuan_2020, Peak_2020, Milne_2020
157 Hossain_2020 The effects of border control and quarantine measures on global spread of COVID-19 M. Pear Hossain; Alvin Junus; Xiaolin Zhu; Pengfei Jia; Tzai-Hung Wen; Dirk Pfeiffer; Hsiang-Yu Yuan 2020 2020-03-17 BioRxiv Y 10.1101/2020.03.13.20035261 lwe7whmg 0.457959 Li_C_2018, Welch_2011, Wu_Q_2014, Pacheco_2017, Stenseth_2008 Yuan_2020, Poletti_2011, Ribeiro_2020, Kretzschmar_2020
158 Zhang_2020 What is required to prevent a second major outbreak of the novel coronavirus SARS-CoV-2 upon lifting the metropolitan-wide quarantine of Wuhan city, China Lei Zhang; Mingwang Shen; Xiaomeng Ma; Shu Su; Wenfeng Gong; Jing Wang; Yusha Tao; Zhuoru Zou; Rui Zhao; Joseph Lau; Wei Li; Feng Liu; Kai Ye; Youfa Wang; Guihua Zhuang; Christopher K Fairley 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.24.20042374 vw4vul5j 0.452659 Mack_2007, Griffiths_2010, Fielding_2014, UNKNOWN_2010, Atkinson_2020 Zhao_2007, Devaux_2020, Rockx_2020, Zhou_2018
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161 Donnelly_2003 Epidemiological determinants of spread of causal agent of severe acute respiratory syndrome in Hong Kong Donnelly, Christl A; Ghani, Azra C; Leung, Gabriel M; Hedley, Anthony J; Fraser, Christophe; Riley, Steven; Abu-Raddad, Laith J; Ho, Lai-Ming; Thach, Thuan-Quoc; Chau, Patsy; Chan, King-Pan; Lam, Tai-Hing; Tse, Lai-Yin; Tsang, Thomas; Liu, Shao-Haei; Kong, James HB; Lau, Edith MC; Ferguson, Neil M; Anderson, Roy M 2003 2003-05-24 PMC N PMC7112380 12781533.0 10.1016/s0140-6736(03)13410-1 7ocseuz3 0.451266 Mondor_2012, Pearson_2020, Atkinson_2020, Choi_2011, Scheuerl_2020 Balkhy_2016, Aleanizy_2017
162 Perez-Reche_2020 Importance of untested infectious individuals for the suppression of COVID-19 epidemics Francisco Perez-Reche; Norval Strachan 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.13.20064022 i2rmc37q 0.451189 Stenseth_2008, Li_C_2018, Welch_2011, Wu_Q_2014, Pai_M_2006
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164 Pitzer_2007 Estimating Variability in the Transmission of Severe Acute Respiratory Syndrome to Household Contacts in Hong Kong, China Pitzer, Virginia E.; Leung, Gabriel M.; Lipsitch, Marc 2007 2007-08-01 PMC N PMC7110150 17493952.0 10.1093/aje/kwm082 cq1sxqlj 0.449645 Mondor_2012, Chen_2018, Li_C_2018, Scheuerl_2020 ZENG_2009, Racelis_2015
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166 Klinkenberg_2006 The Effectiveness of Contact Tracing in Emerging Epidemics Klinkenberg, Don; Fraser, Christophe; Heesterbeek, Hans 2006 2006-12-20 COMM-USE N PMC1762362 17183638.0 10.1371/journal.pone.0000012 1n0rg5vd 0.448194 Polverino_2017, Mack_2007, Looker_2006, O'Dea_2010, van_der_Weijden_2010 Kretzschmar_2020, House_2010, Armbruster_2007, Hellewell_2020
167 Yuen_2015 Turning off the tap: stopping tuberculosis transmission through active case-finding and prompt effective treatment Yuen, Courtney M; Amanullah, Farhana; Dharmadhikari, Ashwin; Nardell, Edward A; Seddon, James A; Vasilyeva, Irina; Zhao, Yanlin; Keshavjee, Salmaan; Becerra, Mercedes C 2015 2015-12-11 PMC N PMC7138065 26515675.0 10.1016/s0140-6736(15)00322-0 tggxfk8a 0.448132 Pai_M_2006, Weiss_2003, Coker_2007, Kreiss_2007 Fan_X_2019, Wang_2007, Poh_K_2019
168 UNKNOWN_2020 Coronavirus Disease-19: Summary of 2,370 Contact Investigations of the First 30 Cases in the Republic of Korea None 2020 2020-04-23 NONCOMM Y PMC7104686 10.24171/j.phrp.2020.11.2.04 1585stal 0.448042 Muniz-Rodriguez_2020, Rossi_2020, Zhuang_2020, Muniz-Rodriguez_2020, Russell_2020 Li_P_2020, Lescure_2020
169 Boyd_2017 Protecting an island nation from extreme pandemic threats: Proof-of-concept around border closure as an intervention Boyd, Matt; Baker, Michael G.; Mansoor, Osman D.; Kvizhinadze, Giorgi; Wilson, Nick 2017 2017-06-16 COMM-USE N PMC5473559 28622344.0 10.1371/journal.pone.0178732 wapjx1nw 0.447674 Mack_2007, Kruk_2008, Atkinson_2020, Stenseth_2008, Griffiths_2010 Mwacalimba_2016, Walldorf_2017, Ribeiro_2020, Singh_2010
170 Wu_J_2016 Fractional Dosing of Yellow Fever Vaccine to Extend Supply: A Modeling Study Joseph T. Wu; Corey M. Peak; Gabriel M. Leung; Marc Lipsitch 2016 2016-05-14 BioRxiv N 10.1101/053421 ejqq2wmi 0.447674 Tripp_2014, Bradbury_2003, Cinti_2005, Czako_2015, Mooney_2013 Wu_J_2016, Buttigieg_2014, Gerber_1990
171 Steffen_2010 Influenza in Travelers: Epidemiology, Risk, Prevention, and Control Issues Steffen, Robert 2010 2010-04-28 PMC N PMC7088976 21308527.0 10.1007/s11908-010-0100-9 a2w8yxye 0.447463 Brucker_2020, Walker_2010, Apisarnthanarak_2007, Mack_2007, Stenseth_2008 Korzeniewski_2014, Zambon_2005, Turner_2010, Shetty_2019
172 Tang_2020 Stochastic discrete epidemic modeling of COVID-19 transmission in the Province of Shaanxi incorporating public health intervention and case importation Sanyi Tang; Biao Tang; Nicola Luigi Bragazzi; Fan Xia; Tangjuan Li; Sha He; Pengyu Ren; Xia Wang; Zhihang Peng; Yanni Xiao; Jianhong Wu 2020 2020-02-29 BioRxiv Y 10.1101/2020.02.25.20027615 aoqyx8mk 0.445896 Li_C_2018, Polverino_2017, Wu_Q_2014, UNKNOWN_2010, Stenseth_2008 Yuan_2020, Hou_J_2020, Peng_2020
173 Adekunle_2020 Delaying the COVID-19 epidemic in Australia: Evaluating the effectiveness of international travel bans Adeshina Israel Adekunle; Michael Meehan; Diana Rojaz Alvarez; James Trauer; Emma McBryde 2020 2020-03-27 BioRxiv Y 10.1101/2020.03.22.20041244 c1eemq9v 0.445515 Griffiths_2010, Buseh_2015, Rodier_2007, Fielding_2014, Mack_2007 Wiboonchutikul_2017, Yong_2016, Gao_H_2016, Al-Tawfiq_2014
174 Hsieh_2007 Impact of quarantine on the 2003 SARS outbreak: A retrospective modeling study Hsieh, Ying-Hen; King, Chwan-Chuan; Chen, Cathy W.S; Ho, Mei-Shang; Hsu, Sze-Bi; Wu, Yi-Chun 2007 2007-02-21 PMC N PMC7094157 17055533.0 10.1016/j.jtbi.2006.09.015 5c579tli 0.444068 Walker_2010, Cinti_2005, Atkinson_2020, UNKNOWN_2010, Lu_P_2016 Hsieh_2005, Gupta_2005, Gumel_2004, Ooi_P_2005
175 Lover_2020 Sentinel Event Surveillance to Estimate Total SARS-CoV-2 Infections, United States Andrew A. Lover; Thomas McAndrew 2020 2020-03-20 BioRxiv Y 10.1101/2020.03.17.20037648 we62087x 0.443403 Rodier_2007, Brucker_2020, Buseh_2015, Griffiths_2010, Fielding_2014 OKBA_2020, Xing_2020, Rabaa_2015
176 Omori_2020 Ascertainment rate of novel coronavirus disease (COVID-19) in Japan Ryosuke Omori; Kenji Mizumoto; Hiroshi Nishiura 2020 2020-03-10 BioRxiv Y 10.1101/2020.03.09.20033183 0d6o5w8z 0.443201 Pearson_2020, Win_K_2011, Rossi_2020, Muniz-Rodriguez_2020 Wu_J_2020, Lescure_2020, Tian_2020, Wang_2020
177 Handel_2020 If containment is not possible, how do we minimize mortality for COVID-19 and other emerging infectious disease outbreaks? Andreas Handel; Joel Miller; Yang Ge; Isaac Chun-Hai Fung 2020 2020-03-17 BioRxiv Y 10.1101/2020.03.13.20034892 czpz3yh2 0.443201 Mack_2007, Coker_2007, Ropeik_2004, Atkinson_2020 Gursel_2020, Landelle_2013, Shakoor_2020
178 Brooks_2020 The impact of unplanned school closure on children’s social contact: rapid evidence review Brooks, Samantha K; Smith, Louise E; Webster, Rebecca K; Weston, Dale; Woodland, Lisa; Hall, Ian; Rubin, G James 2020 2020-04-02 COMM-USE N PMC7140596 32265006.0 10.2807/1560-7917.es.2020.25.13.2000188 cf5srzrv 0.441515 Griffiths_2010, Knapp_2008, Atkinson_2020, Wei_B_2011, Fielding_2014 Brooks_2020, Shetty_2019, Churchill_1997, Bayham_2020
179 Bayham_2020 The Impact of School Closure for COVID-19 on the US Healthcare Workforce and the Net Mortality Effects Jude Bayham; Eli P Fenichel 2020 2020-03-13 BioRxiv Y 10.1101/2020.03.09.20033415 98jz8tox 0.441096 Atkinson_2020, Griffiths_2010, Fielding_2014, Wei_B_2011, Coker_2007 Bayham_2020, Chin_2020, Brooks_2020, Churchill_1997
180 Yezli_2020 COVID-19 social distancing in the Kingdom of Saudi Arabia: Bold measures in the face of political, economic, social and religious challenges Yezli, Saber; Khan, Anas 2020 2020-04-21 PMC Y 10.1016/j.tmaid.2020.101692 44kpu8nw 0.440575 Fielding_2014, Griffiths_2010, Coker_2007, Wei_B_2011, Ng_N_2014
181 Bi_Q_2020 Epidemiology and Transmission of COVID-19 in Shenzhen China: Analysis of 391 cases and 1,286 of their close contacts Qifang Bi; Yongsheng Wu; Shujiang Mei; Chenfei Ye; Xuan Zou; Zhen Zhang; Xiaojian Liu; Lan Wei; Shaun A Truelove; Tong Zhang; Wei Gao; Cong Cheng; Xiujuan Tang; Xiaoliang Wu; Yu Wu; Binbin Sun; Suli Huang; Yu Sun; Juncen Zhang; Ting Ma; Justin Lessler; Teijian Feng 2020 2020-03-04 BioRxiv Y 10.1101/2020.03.03.20028423 hnx213kp 0.439457 Li_C_2018, Mondor_2012, Zhang_2019, Scheuerl_2020, Pai_M_2006 Wen_Y_2020, Wu_J_2020, Wang_2020
182 Mao_Z_2020 The enlightenment from two cases of asymptomatic infection with SARS-CoV-2: is it safe after 14 days of isolation? Mao, Zhi-Qun; Wan, Ren; He, Li-Yi; Hu, Yue-Chun; Chen, Wei 2020 2020-04-03 PMC N 10.1016/j.ijid.2020.03.041 h3imi4tk 0.438695 Atkinson_2020, Shah_2017, Hu_F_2020, Navascués_2018 Timoney_1984, Ouattara_2011, Marlier_2006, Xu_D_2005
183 Javan_2020 Probability of current COVID-19 outbreaks in all US counties Emily Javan; Spencer J. Fox; Lauren Ancel Meyers 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.06.20053561 ciak3b36 0.438216 Mack_2007, Stenseth_2008, Coker_2007, Atkinson_2020, Kruk_2008 Siraj_2020, Einian_2020, Wilder-Smith_2020
184 Swaan_2019 Timeliness of infectious disease reporting, the Netherlands, 2003 to 2017: law change reduced reporting delay, disease identification delay is next Swaan, Corien M; Wong, Albert; Bonačić Marinović, Axel; Kretzschmar, Mirjam EE; van Steenbergen, Jim E 2019 2019-12-05 COMM-USE N PMC6905299 31822327.0 10.2807/1560-7917.es.2019.24.49.1900237 n3lh1v3k 0.437826 Rodier_2007, Mondor_2012, Griffiths_2010, UNKNOWN_2010, Oleske_2009 Sáez-López_2019, Alhamlan_2017, Glennon_2020, Park_2016
185 Shayak_2020 A Path to the End of COIVD-19 - a Mathematical Model B Shayak; Richard H Rand 2020 2020-04-22 BioRxiv Y 10.1101/2020.04.17.20069443 vep95ff1 0.436962 Polverino_2017, Mack_2007, Looker_2006, Mooney_2013, Zheng_2020
186 MacIntyre_2019 Health system capacity in Sydney, Australia in the event of a biological attack with smallpox MacIntyre, Chandini Raina; Costantino, Valentina; Kunasekaran, Mohana Priya 2019 2019-06-14 COMM-USE N PMC6568391 31199825.0 10.1371/journal.pone.0217704 m4xba78g 0.436888 Atkinson_2020, Mack_2007, Amirov_2007, Coker_2007, Wei_B_2011 Porco_2004, Lloyd-Smith_2003, Ohkusa_2005
187 Shuler_2020 Partial unlock model for COVID-19 or similar pandemic averts medical and economic disaster Robert L Shuler 2020 2020-04-06 BioRxiv Y 10.1101/2020.03.30.20048082 lmmrnitr 0.436884 Mack_2007, Coker_2007, Stenseth_2008, Looker_2006, Pang_2004 Einian_2020, Nicolau_2020, Siraj_2020
188 Ferguson_2006 Strategies for mitigating an influenza pandemic Ferguson, Neil M.; Cummings, Derek A. T.; Fraser, Christophe; Cajka, James C.; Cooley, Philip C.; Burke, Donald S. 2006 2006-04-26 None N PMC7095311 16642006.0 10.1038/nature04795 qydo3yr9 0.436780 Mack_2007, Coker_2007, Stenseth_2008, Atkinson_2020, Kruk_2008 Singh_2010, Hollingsworth_2011, Oshitani_2006, Berry_2014
189 Mueller_2020 Using random testing to manage a safe exit from the COVID-19 lockdown Markus Mueller; Peter Derlet; Christopher Mudry; Gabriel Aeppli 2020 2020-04-14 BioRxiv Y 10.1101/2020.04.09.20059360 loi1vs5y 0.436710 Polverino_2017, Looker_2006, Mwabu_2008, van_Helden_2013, Monga_2006 Shayak_2020, Zhigljavsky_2020, Zhang_2020
190 Hochberg_2020 Importance of suppression and mitigation measures in managing COVID-19 outbreaks Michael E. Hochberg 2020 2020-04-02 BioRxiv Y 10.1101/2020.03.31.20048835 4fkb1udl 0.436631 Polverino_2017, Wu_Q_2014, Li_C_2018, Mack_2007, Welch_2011 Kretzschmar_2020, Kretzschmar_2004, Safi_2011, Kucharski_2015
191 Brooks-Pollock_2020 The Population Attributable Fraction (PAF) of cases due to gatherings and groups with relevance to COVID-19 mitigation strategies Ellen Brooks-Pollock; Jonathan M Read; Thomas House; Graham Medley; Matt J Keeling; Leon Danon 2020 2020-03-23 BioRxiv Y 10.1101/2020.03.20.20039537 mzcajw8c 0.436210 Win_K_2011, Pearson_2020, Wu_Z_2013, Li_C_2018, Mack_2007 Cousien_2019, Wang_2020, Lo_Iacono_2015, Berto_2018
192 Chao_2020 Modeling layered non-pharmaceutical interventions against SARS-CoV-2 in the United States with Corvid Dennis L Chao; Assaf P Oron; Devabhaktuni Srikrishna; Michael Famulare 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.08.20058487 3oovwwem 0.436191 Mack_2007, Stenseth_2008, Coker_2007, Mwabu_2008, Zhou_2020 Kim_K_2020, Rockx_2020, Wu_F_2020, Bukreyeva_2020
193 Grubaugh_2018 International travelers and genomics uncover a ‘hidden’ Zika outbreak Nathan D. Grubaugh; Sharada Saraf; Karthik Gangavarapu; Alexander Watts; Amanda L. Tan; Rachel J. Oidtman; Jason T. Ladner; Glenn Oliveira; Nathaniel L. Matteson; Moritz U.G. Kraemer; Chantal B.F. Vogels; Aaron Hentoff; Deepit Bhatia; Danielle Stanek; Blake Scott; Vanessa Landis; Ian Stryker; Marshall R. Cone; Edgar W. Kopp; Andrew C. Cannons; Lea Heberlein-Larson; Stephen White; Leah D. Gillis; Michael J. Ricciardi; Jaclyn Kwal; Paola K. Lichtenberger; Diogo M. Magnani; David I. Watkins; Gustavo Palacios; Davidson H. Hamer; Lauren M. Gardner; T. Alex Perkins; Guy Baele; Kamran Khan; Andrea Morrison; Sharon Isern; Scott F. Michael; Kristian G. Andersen 2018 2018-12-14 BioRxiv N 10.1101/496901 lh6zul8l 0.436123 Lu_P_2016, Cinti_2005, Wang_2014, Buseh_2015, Webster_2006 Grubaugh_2019, Rabaa_2015, Shi_W_2017, O’Reilly_2018
194 Goh_D_2004 Secondary Household Transmission of SARS, Singapore Goh, Denise Li-Meng; Lee, Bee Wah; Chia, Kee Seng; Heng, Bee Hoon; Chen, Mark; Ma, Stefan; Tan, Chorh Chuan 2004 2004-02-23 PMC N PMC3322927 15030688.0 10.3201/eid1002.030676 3tvue16i 0.436025 Rossi_2020, Muniz-Rodriguez_2020, Angraal_2018, Torner_2015 Ha_L_2004, Lau_J_2004, Chen_2004, Wang_2020
195 Cui_F_2011 Transmission of Pandemic Influenza A (H1N1) Virus in a Train in China Cui, Fuqiang; Luo, Huiming; Zhou, Lei; Yin, Dapeng; Zheng, Canjun; Wang, Dingming; Gong, Jian; Fang, Gang; He, Jianfeng; McFarland, Jeffrey; Yu, Hongjie 2011 2011-07-05 COMM-USE N PMC3899419 21646746.0 10.2188/jea.je20100119 qwe1hni0 0.433856 Walker_2010, Choi_2011, Lekana-Douki_2013, Marchand-Austin_2009, UNKNOWN_2010 Nougairède_2010
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199 Deng_2020 A Genomic Survey of SARS-CoV-2 Reveals Multiple Introductions into Northern California without a Predominant Lineage Xianding Deng; Wei Gu; Scot Federman; Louis Du Plessis; Oliver Pybus; Nuno Faria; Candace Wang; Guixia Yu; Chao-Yang Pan; Hugo Guevara; Alicia Sotomayor-Gonzalez; Kelsey Zorn; Allan Gopez; Venice Servellita; Elaine Hsu; Steve Miller; Trevor Bedford; Alexander Greninger; Pavitra Roychoudhury; Michael Famulare; Helen Y Chu; Jay Shendure; Lea Starita; Catie Anderson; Karthik Gangavarapu; Mark Zeller; Emily Spencer; Kristian Andersen; Duncan MacCannell; Suxiang Tong; Gregory Armstrong; Clinton Paden; Yan Li; Ying Zhang; Scott Morrow; Matthew Willis; Bela Matyas; Sundari Mase; Olivia Kasirye; Maggie Park; Curtis Chan; Alexander Yu; Shua Chai; Elsa Villarino; Brandon Bonin; Debra Wadford; Charles Y Chiu 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.27.20044925 cbc98t7x 0.431896 Lim_T_2012, Kim_D_2016, Wang_2014, Lee_S_2014, Eden_2020 Rockx_2020, Niemeyer_2018, Boni_2020, OKBA_2020
200 Nishiura_2007 Time variations in the transmissibility of pandemic influenza in Prussia, Germany, from 1918–19 Nishiura, Hiroshi 2007 2007-06-04 COMM-USE N PMC1892008 17547753.0 10.1186/1742-4682-4-20 evyniq0v 0.431253 Polverino_2017, Li_C_2018, Kenah_2012, Sadun_2020, Tao_Y_2020 Nishiura_2006, Mostaço-Guidolin_2011, Poletti_2011
201 Costantino_2020 The effectiveness of full and partial travel bans against COVID-19 spread in Australia for travellers from China. Valentina Costantino; David James Heslop; Chandini Raina MacIntyre 2020 2020-03-12 BioRxiv Y 10.1101/2020.03.09.20032045 pxymczn2 0.430739 Griffiths_2010, Fielding_2014, Stenseth_2008, Pirie_2006 Camitz_2006, Brynildsrud_2020, Yuan_2020, Segura_2019
202 Kim_S_2020 School Opening Delay Effect on Transmission Dynamics of Coronavirus Disease 2019 in Korea: Based on Mathematical Modeling and Simulation Study Kim, Soyoung; Kim, Yae-Jean; Peck, Kyong Ran; Jung, Eunok 2020 2020-04-01 NONCOMM Y PMC7131906 32242349.0 10.3346/jkms.2020.35.e143 ndscdqcb 0.430563 Pearson_2020, Mondor_2012, Tay_K_2020, Tomie_2020, Cowling_2008 Kim_Y_2016, Tang_2020, Shi_P_2020, Yuan_2020
203 Jiang_2020 Is a 14-day quarantine period optimal for effectively controlling coronavirus disease 2019 (COVID-19)? Xue Jiang; Yawei Niu; Xiong Li; Lin Li; Wenxiang Cai; Yucan Chen; Bo Liao; Edwin Wang 2020 2020-03-18 BioRxiv Y 10.1101/2020.03.15.20036533 djq0lvr2 0.429909 Pearson_2020, Klem_2013, Scheuerl_2020, Chowell_2020, Cowling_2008 Xu_D_2005, Xing_2020, Xia_W_2020, Lescure_2020
204 Tsang_2016 Household Transmission of Influenza Virus Tsang, Tim K.; Lau, Lincoln L.H.; Cauchemez, Simon; Cowling, Benjamin J. 2016 2016-02-29 None N PMC4733423 26612500.0 10.1016/j.tim.2015.10.012 phkw82yl 0.427421 Brucker_2020, Lu_P_2016, Walker_2010, Karlsson_2012, Yin_J_2013 Munywoki_2015, Zambon_2005, Scott_2019, Smith_2012
205 Yen_M_2009 Taipei's Use of a Multi-Channel Mass Risk Communication Program to Rapidly Reverse an Epidemic of Highly Communicable Disease Yen, Muh-Yong; Wu, Tsung-Shu Joseph; Chiu, Allen Wen-Hsiang; Wong, Wing-Wai; Wang, Po-En; Chan, Ta-Chien; King, Chwan-Chuen 2009 2009-11-23 COMM-USE N PMC2776508 19956722.0 10.1371/journal.pone.0007962 5iejckwx 0.427059 Lim_T_2012, Ma_X_2020, Griffiths_2010, Fielding_2014, Laurens_2019 Hsu_Y_2017, Yuan_2020, dos_Santos_2018
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211 Hegde_2016 Investigating Rare Risk Factors for Nipah Virus in Bangladesh: 2001–2012 Hegde, Sonia T.; Sazzad, Hossain M. S.; Hossain, M. Jahangir; Alam, Mahbub-Ul; Kenah, Eben; Daszak, Peter; Rollin, Pierre; Rahman, Mahmudur; Luby, Stephen P.; Gurley, Emily S. 2016 2016-10-13 PMC N PMC5164848 27738775.0 10.1007/s10393-016-1166-0 jw20mrcy 0.423510 Mack_2007, Rusoke-Dierich_2018, Pai_M_2006, Stenseth_2008 Ceylan_2013, Kabwama_2017, Aleanizy_2017, Sazzad_2013
212 Toth_2016 Estimates of the risk of large or long-lasting outbreaks of Middle East respiratory syndrome after importations outside the Arabian Peninsula Toth, Damon J.A.; Tanner, Windy D.; Khader, Karim; Gundlapalli, Adi V. 2016 2016-09-30 PMC N PMC5047297 27663788.0 10.1016/j.epidem.2016.04.002 i1egk513 0.422754 Lim_T_2012, Pearson_2020, Muniz-Rodriguez_2020, Du_Z_2020 Eifan_2017, Wiboonchutikul_2017, Al-Tawfiq_2016, Alkhamis_2018
213 Yu_P_2020 A Familial Cluster of Infection Associated With the 2019 Novel Coronavirus Indicating Possible Person-to-Person Transmission During the Incubation Period Yu, Ping; Zhu, Jiang; Zhang, Zhengdong; Han, Yingjun 2020 2020-02-18 PMC Y PMC7107453 32067043.0 10.1093/infdis/jiaa077 qxhujttt 0.421123 Lu_P_2016, Walker_2010, Wiwanitkit_2014, Wang_2014 Li_P_2020, Chan_2020, Chua_2011
214 Roy_S_2020 COVID-19 pandemic: Impact of lockdown, contact and non-contact transmissions on infection dynamics Shovonlal Roy 2020 2020-04-07 BioRxiv Y 10.1101/2020.04.04.20050328 61ta81iy 0.419980 Polverino_2017, Li_C_2018, Mack_2007, Wu_Q_2014, Lumby_2018 Kretzschmar_2020, Rockx_2020, Yuan_2020
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216 Tang_2020 Estimation of the Transmission Risk of the 2019-nCoV and Its Implication for Public Health Interventions Tang, Biao; Wang, Xia; Li, Qian; Bragazzi, Nicola Luigi; Tang, Sanyi; Xiao, Yanni; Wu, Jianhong 2020 2020-01-01 COMM-USE Y PMC7074281 32046137.0 10.3390/jcm9020462 lgphvgar 0.419297 Li_C_2018, Stenseth_2008, Wu_Q_2014, Pai_M_2006, Rusoke-Dierich_2018 Rabaa_2015, Tang_2020, Yuan_2020, Wang_2020
217 Chen_2020 Mitigating COVID-19 outbreak via high testing capacity and strong transmission-intervention in the United States Shi Chen; Qin Li; Song Gao; Yuhao Kang; Xun Shi 2020 2020-04-07 BioRxiv Y 10.1101/2020.04.03.20052720 c84ybwve 0.419256 Coker_2007, Mack_2007, Stenseth_2008, Kruk_2008, Mwabu_2008 Kretzschmar_2020, Yuan_2020, Siraj_2020
218 Hortacsu_2020 Estimating the Fraction of Unreported Infections in Epidemics with a Known Epicenter: an Application to COVID-19 Ali Hortacsu; Jiarui Liu; Timothy Schwieg 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.13.20063511 pv9risbr 0.419200 Li_C_2018, Pearson_2020, Scheuerl_2020, Mondor_2012, Liu_Z_2020
219 Bui_L_2020 EARLY ESTIMATION OF REPRODUCTION NUMBER OF COVID-19 IN VIETNAM Long Viet Bui; Truong Thanh Nguyen; Ha Nguyen 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.28.20046136 i62celun 0.419000 Walker_2010, Lu_P_2016, UNKNOWN_2010, Cinti_2005 Zhao_2020, Zhang_2020, Moon_2017
220 Morimoto_2009 Assessment of intervention strategies against a novel influenza epidemic using an individual-based model Morimoto, Tomoko; Ishikawa, Hirofumi 2009 2009-11-26 PMC N PMC2854337 19941171.0 10.1007/s12199-009-0122-9 9z37ob31 0.418666 Griffiths_2010, Knapp_2008, Amirov_2007, UNKNOWN_2010, Buseh_2015 Milne_2020, Enanoria_2016, Chin_2019
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222 Paternina-Caicedo_2020 Social interventions can lower COVID-19 deaths in middle-income countries Angel Jose Paternina-Caicedo; Marc Choisy; Christian Garcia-Calavaro; Guido Camargo-España; José Rojas-Suarez; Carmelo Dueñas; Adrian Smith; Fernando Pio De la Hoz-Restrepo 2020 2020-04-21 BioRxiv Y 10.1101/2020.04.16.20063727 wolrseqc 0.418191 Atkinson_2020, Griffiths_2010, Fielding_2014, Kruk_2008, Amirov_2007
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232 Chinazzi_2020 The effect of travel restrictions on the spread of the 2019 novel coronavirus (COVID-19) outbreak Chinazzi, Matteo; Davis, Jessica T.; Ajelli, Marco; Gioannini, Corrado; Litvinova, Maria; Merler, Stefano; Pastore y Piontti, Ana; Mu, Kunpeng; Rossi, Luca; Sun, Kaiyuan; Viboud, Cécile; Xiong, Xinyue; Yu, Hongjie; Halloran, M. Elizabeth; Longini, Ira M.; Vespignani, Alessandro 2020 2020-03-06 None Y PMC7164386 32144116.0 10.1126/science.aba9757 pq75mafr 0.414433 Lim_T_2012, Griffiths_2010, Pirie_2006, Fielding_2014 Chinazzi_2020, Yuan_2020, He_J_2020, Zhao_2007
233 Zhao_2020 COVID-19 and gender-specific difference: Analysis of public surveillance data in Hong Kong and Shenzhen, China, from January 10 to February 15, 2020 Zhao, Shi; Cao, Peihua; Chong, Marc K.C.; Gao, Daozhou; Lou, Yijun; Ran, Jinjun; Wang, Kai; Wang, Weiming; Yang, Lin; He, Daihai; Wang, Maggie H. 2020 2020-03-09 PMC Y PMC7113032 32146921.0 10.1017/ice.2020.64 1mchg5yg 0.414273 Lim_T_2012, Georgiev_2009, Tomie_2020, UNKNOWN_2010, Griffiths_2010 He_J_2020, Ping_2020, Tian_2020, Lescure_2020
234 Mark_2020 Coronavirus disease (COVID-19) Community Testing Team in Scotland: A 14-day review, 6 to 20 February 2020 Mark, Kate; Steel, Katie; Stevenson, Janet; Evans, Christine; McCormick, Duncan; Willocks, Lorna; McCallum, Alison; Jones, Laura; Johannessen, Ingolfur; Templeton, Kate; Koch, Oliver; Mackintosh, Claire 2020 2020-03-26 COMM-USE Y PMC7118345 32234116.0 10.2807/1560-7917.es.2020.25.12.2000217 4feo08nh 0.413400 Atkinson_2020, Amirov_2007, Coker_2007, Fielding_2014, Mwabu_2008 Nicastri_2020, Chen_2020, Cho_S_2016, Alfaraj_2019
235 Zhang_2020 Estimation of the reproductive number of Novel Coronavirus (COVID-19) and the probable outbreak size on the Diamond Princess cruise ship: A data-driven analysis Zhang, Sheng; Diao, MengYuan; Yu, Wenbo; Pei, Lei; Lin, Zhaofen; Chen, Dechang 2020 2020-01-01 None Y PMC7110591 32097725.0 10.1016/j.ijid.2020.02.033 yuppix3r 0.413212 batista_2020, Kenah_2012, Polverino_2017, Pearson_2020, Tao_Y_2020 Linton_2020, Ma_S_2020, Khosravi_2020, Jing_2020
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247 Klausner_2020 A single holiday was the turning point of the COVID-19 policy of Israel Ziv Klausner; Eyal Fattal; Eitan Hirsch; Shmuel C Shapira 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.26.20044412 32hjzdum 0.408539 Mack_2007, Griffiths_2010, Coker_2007, Stenseth_2008, Wei_B_2011 Chin_2019, Yuan_2020, Milne_2020, Filho_2020
248 Qiu_S_2015 Whole-genome Sequencing for Tracing the Transmission Link between Two ARD Outbreaks Caused by a Novel HAdV Serotype 7 Variant, China Qiu, Shaofu; Li, Peng; Liu, Hongbo; Wang, Yong; Liu, Nan; Li, Chengyi; Li, Shenlong; Li, Ming; Jiang, Zhengjie; Sun, Huandong; Li, Ying; Xie, Jing; Yang, Chaojie; Wang, Jian; Li, Hao; Yi, Shengjie; Wu, Zhihao; Jia, Leili; Wang, Ligui; Hao, Rongzhang; Sun, Yansong; Huang, Liuyu; Ma, Hui; Yuan, Zhengquan; Song, Hongbin 2015 2015-09-04 COMM-USE N PMC4559894 26338697.0 10.1038/srep13617 gqnsg2en 0.407919 Lu_P_2016, Puranaveja_2009, Walker_2010, Lee_S_2014 Mi_Z_2013, Agoti_2017, Ren_X_2008
249 Kretzschmar_2004 Ring Vaccination and Smallpox Control Kretzschmar, Mirjam; van den Hof, Susan; Wallinga, Jacco; van Wijngaarden, Jan 2004 2004-05-23 PMC N PMC3323203 15200816.0 10.3201/eid1005.030419 qwq46b8a 0.407619 Stenseth_2008, Mack_2007, Coker_2007, Wu_Q_2014, Looker_2006 Porco_2004, Kucharski_2015, Safi_2011, Ohkusa_2005
250 Ngonghala_2020 Mathematical assessment of the impact of non-pharmaceutical interventions on curtailing the 2019 novel Coronavirus Calistus N Ngonghala; Enahoro Iboi; Steffen Eikenberry; Matthew Scotch; Chandini Raina MacIntyre; Matthew H Bonds; Abba B Gumel 2020 2020-04-18 BioRxiv Y 10.1101/2020.04.15.20066480 yp8x5zwi 0.407468 Stenseth_2008, Coker_2007, Mack_2007, Mwabu_2008, Wei_B_2011
251 Zou_Y_2020 Outbreak analysis with a logistic growth model shows COVID-19 suppression dynamics in China Yi Zou; Stephen Pan; Peng Zhao; Lei Han; Xiaoxiang Wang; Johannes Knops; Wopke van der Werf; Lia Hemerik 2020 2020-03-27 BioRxiv Y 10.1101/2020.03.25.20043539 b4zr1g04 0.405199 Tomie_2020, Mondor_2012, batista_2020, Li_C_2018, Pearson_2020 Xia_W_2020
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270 Lin_S_2020 Which Measures are Effective in Containing COVID-19? Empirical Research Based on Prevention and Control Cases in China Shanlang Lin; Junpei Huang; Ziwen He; Dandan Zhan 2020 2020-03-30 BioRxiv N 10.1101/2020.03.28.20046110 z470rn66 0.395788 Coker_2007, Griffiths_2010, Mack_2007, Mwabu_2008, Wei_B_2011 Maharaj_2012, Prem_2020, Kraemer_2020, Anderson_2020
271 Al_Hosani_2019 Serologic Follow-up of Middle East Respiratory Syndrome Coronavirus Cases and Contacts—Abu Dhabi, United Arab Emirates Al Hosani, Farida Ismail; Kim, Lindsay; Khudhair, Ahmed; Pham, Huong; Al Mulla, Mariam; Al Bandar, Zyad; Pradeep, Krishna; Elkheir, Kheir Abou; Weber, Stefan; Khoury, Mary; Donnelly, George; Younis, Naima; El Saleh, Feda; Abdalla, Muna; Imambaccus, Hala; Haynes, Lia M; Thornburg, Natalie J; Harcourt, Jennifer L; Miao, Congrong; Tamin, Azaibi; Hall, Aron J; Russell, Elizabeth S; Harris, Aaron M; Kiebler, Craig; Mir, Roger A; Pringle, Kimberly; Alami, Negar N; Abedi, Glen R; Gerber, Susan I 2019 2019-02-01 PMC N PMC7108211 29905769.0 10.1093/cid/ciy503 qtlevnbt 0.395251 Kim_D_2016, Al_Hammadi_2015, Wang_2014, Deng_2015, Ly_S_2007 Müller_2015, Harcourt_2018, Aleanizy_2017, Khalid_2014
272 Pellis_2020 Challenges in control of Covid-19: short doubling time and long delay to effect of interventions Lorenzo Pellis; Francesca Scarabel; Helena B Stage; Christopher E Overton; Lauren H K Chappell; Katrina A Lythgoe; Elizabeth Fearon; Emma Bennett; Jacob Curran-Sebastian; Rajenki Das; Martyn Fyles; Hugo Lewkowicz; Xiaoxi Pang; Bindu Vekaria; Luke Webb; Thomas A House; Ian Hall 2020 2020-04-15 BioRxiv Y 10.1101/2020.04.12.20059972 k5q07y4b 0.394763 Stenseth_2008, UNKNOWN_2019, Mack_2007, Coker_2007, Rusoke-Dierich_2018 Ke_R_2020, Siraj_2020, Kretzschmar_2020, Shayak_2020
273 UNKNOWN_2006 Nonpharmaceutical Interventions for Pandemic Influenza, National and Community Measures None 2006 2006-01-23 PMC N PMC3291415 16494723.0 10.3201/eid1201.051371 bb6lv6yg 0.393030 Coker_2007, Stenseth_2008, Mack_2007, Amirov_2007, Atkinson_2020 UNKNOWN_2006, Bing-Yuan_2018, Shetty_2019, Berry_2014
274 Wang_2020 Strongly heterogeneous transmission of COVID-19 in mainland China: local and regional variation Yuke Wang; Peter F.M. Teunis 2020 2020-03-16 BioRxiv Y 10.1101/2020.03.10.20033852 j181i5pr 0.392994 Lim_T_2012, Jin_G_2020, Tomie_2020, Lin_Q_2020, Sun_H_2020 He_J_2020, Yuan_2020, Ping_2020, Xia_W_2020
275 Kwok_2006 Using models to identify routes of nosocomial infection: a large hospital outbreak of SARS in Hong Kong Kwok, Kin On; Leung, Gabriel M; Lam, Wai Yee; Riley, Steven 2006 2006-12-12 PMC N PMC2197207 17254984.0 10.1098/rspb.2006.0026 r6bzrkhg 0.392725 Li_C_2018, Lumby_2018, Guery_2014, Stenseth_2008, Wu_Q_2014 Park_2016, UNKNOWN_2015
276 Bae_J_2015 Surveillance operation for the 141st confirmed case of Middle East Respiratory Syndrome coronavirus in response to the patient’s prior travel to Jeju Island Bae, Jong-Myon 2015 2015-08-07 NONCOMM N PMC4546987 26300437.0 10.4178/epih/e2015035 qxlypgcj 0.392089 Lim_T_2012, Kim_D_2016, Wang_2014, Deng_2015, GHSA_2015 UNKNOWN_2015, Aleanizy_2017, Oh_M_2015
277 Wells_2020 Impact of international travel and border control measures on the global spread of the novel 2019 coronavirus outbreak Wells, Chad R.; Sah, Pratha; Moghadas, Seyed M.; Pandey, Abhishek; Shoukat, Affan; Wang, Yaning; Wang, Zheng; Meyers, Lauren A.; Singer, Burton H.; Galvani, Alison P. 2020 2020-03-31 None Y PMC7132249 32170017.0 10.1073/pnas.2002616117 okryb7ea 0.391087 Lim_T_2012, Win_K_2011, Mondor_2012, Pirie_2006, Pearson_2020 Chinazzi_2020, Chinazzi_2020, Yuan_2020, He_J_2020
278 Sousa-Pinto_2020 Is scaling-up COVID-19 testing cost-saving? Bernardo Sousa-Pinto; Joao Almeida Fonseca; Altamiro Costa-Pereira; Francisco Nuno Rocha-Goncalves 2020 2020-03-27 BioRxiv Y 10.1101/2020.03.22.20041137 s4kfza3o 0.390747 Stenseth_2008, Coker_2007, Rodier_2007, Blendon_2008 Ugarov_2020, Grech_2020, Zhang_2020, Ceylan_2013
279 Guzzetta_2020 Potential short-term outcome of an uncontrolled COVID-19 epidemic in Lombardy, Italy, February to March 2020 Guzzetta, Giorgio; Poletti, Piero; Ajelli, Marco; Trentini, Filippo; Marziano, Valentina; Cereda, Danilo; Tirani, Marcello; Diurno, Giulio; Bodina, Annalisa; Barone, Antonio; Crottogini, Lucia; Gramegna, Maria; Melegaro, Alessia; Merler, Stefano 2020 2020-03-26 COMM-USE Y PMC7118340 32234117.0 10.2807/1560-7917.es.2020.25.12.2000293 sga5is3q 0.390747 Laurens_2019, Atkinson_2020, Rossi_2020, Muniz-Rodriguez_2020, Zhuang_2020 Chen_2020, Ko_J_2018, Chen_2020, Hedrich_2020
280 Yang_2020 Feasibility Study of Mitigation and Suppression Intervention Strategies for Controlling COVID-19 Outbreaks in London and Wuhan Po Yang; Jun Qi; Shuhao Zhang; Xulong Wang; Gaoshan Bi; Yun Yang; Bin Sheng 2020 2020-04-04 BioRxiv Y 10.1101/2020.04.01.20043794 7yzib4j0 0.390266 Stenseth_2008, Mack_2007, Griffiths_2010, UNKNOWN_2019, Li_C_2018 Yang_2020, Yuan_2020, He_J_2020, Lai_S_2020
281 Routledge_2020 Tracking progress towards malaria elimination in China: Individual-level estimates of transmission and its spatiotemporal variation using a diffusion network approach Routledge, Isobel; Lai, Shengjie; Battle, Katherine E.; Ghani, Azra C.; Gomez-Rodriguez, Manuel; Gustafson, Kyle B.; Mishra, Swapnil; Unwin, Juliette; Proctor, Joshua L.; Tatem, Andrew J.; Li, Zhongjie; Bhatt, Samir 2020 2020-03-23 COMM-USE N PMC7117777 32203520.0 10.1371/journal.pcbi.1007707 44mvuunh 0.388880 Li_C_2018, Pai_M_2006, Chen_2018, Welch_2011, Wu_Z_2013 Routledge_2019, Chapman_2020, Prem_2019, Spear_2012
282 Herrera-Diestra_2019 Local risk perception enhances epidemic control Herrera-Diestra, José L.; Meyers, Lauren Ancel 2019 2019-12-03 COMM-USE N PMC6890219 31794551.0 10.1371/journal.pone.0225576 9c0zrp7p 0.388873 Mack_2007, Coker_2007, Stenseth_2008, Kruk_2008, Ropeik_2004 Porco_2004, Enanoria_2016, Maharaj_2012
283 Chen_2020 COVID-19 control in China during mass population movements at New Year Chen, Simiao; Yang, Juntao; Yang, Weizhong; Wang, Chen; Bärnighausen, Till 2020 2020-03-13 PMC Y PMC7159085 32105609.0 10.1016/s0140-6736(20)30421-9 6kuigenh 0.388870 Fielding_2014, Mack_2007, Griffiths_2010, Coker_2007, Tulchinsky_2014 Liu_H_2020, Chin_2019, Yuan_2020
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285 Kim_K_2015 Epidemiologic features of the first MERS outbreak in Korea: focus on Pyeongtaek St. Mary’s Hospital Kim, Kyung Min; Ki, Moran; Cho, Sung-il; Sung, Minki; Hong, Jin Kwan; Cheong, Hae-Kwan; Kim, Jong-Hun; Lee, Sang-Eun; Lee, Changhwan; Lee, Keon-Joo; Park, Yong-Shik; Kim, Seung Woo; Choi, Bo Youl 2015 2015-09-17 None N PMC4652064 26725225.0 10.4178/epih/e2015041 oy3e63ym 0.387225 Lim_T_2012, Laurens_2019, Ma_X_2020, Georgiev_2009, Kim_D_2016 Park_2016, Hwang_2018
286 Coelho_2020 Assessing the potential impacts of COVID-19 in Brasil: Mobility, Morbidity and Impact to the Health System Flavio Codeco Coelho; Raquel Martins Lana; Oswaldo G Cruz; Claudia T Codeco; Daniel Villela; Leonardo S Bastos; Ana Pastory y Piontti; Jessica T Davis; Alessandro Vespignani; Marcelo F.C. Gomes 2020 2020-03-23 BioRxiv Y 10.1101/2020.03.19.20039131 h1b0s2wy 0.386909 Fielding_2014, Griffiths_2010, Buseh_2015, Wei_B_2011 dos_Santos_2018, Filho_2020, Dattilo_2020, Liu_H_2020
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288 Hale_2012 Screening for Influenza A(H1N1)pdm09, Auckland International Airport, New Zealand Hale, Michael J.; Hoskins, Richard S.; Baker, Michael G. 2012 2012-05-23 PMC N PMC3358051 22516105.0 10.3201/eid1805.111080 pqpqayuv 0.385993 Lim_T_2012, Lekana-Douki_2013, Kim_D_2016, Song_2018 Marx_2013, Yang_2013, Thongpan_2019, Li_H_2015
289 Lee_S_2015 Probable transmission chains of Middle East respiratory syndrome coronavirus and the multiple generations of secondary infection in South Korea Lee, Shui Shan; Wong, Ngai Sze 2015 2015-09-30 PMC N PMC7110481 26216766.0 10.1016/j.ijid.2015.07.014 65s09sk5 0.385583 Walker_2010, Kim_D_2016, Lu_P_2016, Buseh_2015, Wang_2014 UNKNOWN_2015, Park_2016, Al-Tawfiq_2016
290 Aleta_2020 A data-driven assessment of early travel restrictions related to the spreading of the novel COVID-19 within mainland China Alberto Aleta; Qitong Hu; Jiachen Ye; Peng Ji; Yamir Moreno 2020 2020-03-08 BioRxiv Y 10.1101/2020.03.05.20031740 k13cchxn 0.385304 Stenseth_2008, Mack_2007, Li_C_2018, Looker_2006, van_der_Weijden_2010 Yuan_2020, Chinazzi_2020, He_J_2020, Hilton_2020
291 Gloeckner_2020 Now-casting the COVID-19 epidemic: The use case of Japan, March 2020 Stephan Gloeckner; Gerard Krause; Michael Hoehle 2020 2020-03-23 BioRxiv Y 10.1101/2020.03.18.20037473 4fyihdkv 0.384991 Mondor_2012, UNKNOWN_2013, Kreiss_2007, Guery_2014, UNKNOWN_2010 Siraj_2020, Roosa_2020, Ghaffarzadegan_2020, Ke_R_2020
292 Muller_2020 Mobility traces and spreading of COVID-19 Sebastian Alexander Muller; Michael Balmer; Andreas Neumann; Kai Nagel 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.27.20045302 ejdbx7q7 0.384044 Mack_2007, Stenseth_2008, Mooney_2013, Zheng_2020, Looker_2006 Pepe_2020, Shayak_2020, Kraemer_2020, Siraj_2020
293 Choi_2015 Epidemiological investigation of the 119th confirmed Middle East Respiratory Syndrome coronavirus case with an indefinite mode of transmission during the Pyeongtaek outbreak in Korea Choi, Jong Hyuk; Yoo, Byoungin; Lee, Soon Young; Lee, Eun Gyu; Ki, Moran; Lee, Woncheol; Jung, Jong Rak; Chang, Kyujin 2015 2015-12-10 COMM-USE N PMC4789606 26971695.0 10.4178/epih/e2015054 nj5w6eb1 0.383231 Rusoke-Dierich_2018, Stenseth_2008, Griffiths_2010, Buseh_2015, Mondor_2012 Aleanizy_2017, Balkhy_2016, Park_2016, El-Kafrawy_2019
294 Pourbohloul_2009 Initial human transmission dynamics of the pandemic (H1N1) 2009 virus in North America Pourbohloul, Babak; Ahued, Armando; Davoudi, Bahman; Meza, Rafael; Meyers, Lauren A.; Skowronski, Danuta M.; Villaseñor, Ignacio; Galván, Fernando; Cravioto, Patricia; Earn, David J. D.; Dushoff, Jonathan; Fisman, David; Edmunds, W. John; Hupert, Nathaniel; Scarpino, Samuel V.; Trujillo, Jesús; Lutzow, Miguel; Morales, Jorge; Contreras, Ada; Chávez, Carolina; Patrick, David M.; Brunham, Robert C. 2009 2009-08-18 PMC N PMC3122129 19702583.0 10.1111/j.1750-2659.2009.00100.x 1vvlzuue 0.383163 Walker_2010, Marchand-Austin_2009, Lekana-Douki_2013, Choi_2011, Yang_2010 Arellano-Llamas_2017, Guertler_2010
295 Li_Q_2020 Early Transmission Dynamics in Wuhan, China, of Novel Coronavirus–Infected Pneumonia Li, Qun; Guan, Xuhua; Wu, Peng; Wang, Xiaoye; Zhou, Lei; Tong, Yeqing; Ren, Ruiqi; Leung, Kathy S.M.; Lau, Eric H.Y.; Wong, Jessica Y.; Xing, Xuesen; Xiang, Nijuan; Wu, Yang; Li, Chao; Chen, Qi; Li, Dan; Liu, Tian; Zhao, Jing; Liu, Man; Tu, Wenxiao; Chen, Chuding; Jin, Lianmei; Yang, Rui; Wang, Qi; Zhou, Suhua; Wang, Rui; Liu, Hui; Luo, Yinbo; Liu, Yuan; Shao, Ge; Li, Huan; Tao, Zhongfa; Yang, Yang; Deng, Zhiqiang; Liu, Boxi; Ma, Zhitao; Zhang, Yanping; Shi, Guoqing; Lam, Tommy T.Y.; Wu, Joseph T.; Gao, George F.; Cowling, Benjamin J.; Yang, Bo; Leung, Gabriel M.; Feng, Zijian 2020 2020-03-26 None Y PMC7121484 31995857.0 10.1056/nejmoa2001316 e9rt7z8d 0.382323 Muniz-Rodriguez_2020, Pearson_2020, Zhuang_2020, Du_Z_2020, Win_K_2011 Xia_W_2020, Kui_L_2020, Wang_2020
296 Willem_2020 SOCRATES: An online tool leveraging a social contact data sharing initiative to assess mitigation strategies for COVID-19 Lander Willem; Thang Van Hoang; Sebastian Funk; Pietro Coletti; Philippe Beutels; Niel Hens 2020 2020-03-06 BioRxiv Y 10.1101/2020.03.03.20030627 d4dnz2lk 0.381003 Zhou_2020, Mwabu_2008, Knapp_2008, Wei_B_2011, Coker_2007 Stein_2015, Chen_2007, Yang_2020, Klepac_2020
297 an_der_Heiden_2009 Breaking the Waves: Modelling the Potential Impact of Public Health Measures to Defer the Epidemic Peak of Novel Influenza A/H1N1 an der Heiden, Matthias; Buchholz, Udo; Krause, Gérard; Kirchner, Göran; Claus, Hermann; Haas, Walter H. 2009 2009-12-21 COMM-USE N PMC2791869 20027293.0 10.1371/journal.pone.0008356 yxtdqjay 0.380695 Li_C_2018, Wu_Q_2014, Chen_2018, Mondor_2012, UNKNOWN_2010 Kretzschmar_2020, dos_Santos_2018, Yuan_2020, Filho_2020
298 Peng_2020 Management and Treatment of COVID-19: The Chinese Experience Peng, Fujun; Tu, Lei; Yang, Yongshi; Hu, Peng; Wang, Runsheng; Hu, Qinyong; Cao, Feng; Jiang, Taijiao; Sun, Jinlyu; Xu, Guogang; Chang, Christopher 2020 2020-04-17 PMC Y 10.1016/j.cjca.2020.04.010 gy0kfhy6 0.378738 Stenseth_2008, Griffiths_2010, Amirov_2007, Coker_2007, Wei_B_2011
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300 Eubank_2020 Commentary on Ferguson, et al., “Impact of Non-pharmaceutical Interventions (NPIs) to Reduce COVID-19 Mortality and Healthcare Demand” Eubank, S.; Eckstrand, I.; Lewis, B.; Venkatramanan, S.; Marathe, M.; Barrett, C. L. 2020 2020-04-08 PMC Y PMC7140590 10.1007/s11538-020-00726-x kqntu6ej 0.378362 Murray_2017, Rodier_2007, UNKNOWN_2020, Lipsitch_2014, UNKNOWN_2016 Mehta_2020, Russell_2020, Cortegiani_2020
301 Kraemer_2020 The effect of human mobility and control measures on the COVID-19 epidemic in China Moritz U.G. Kraemer; Chia-Hung Yang; Bernardo Gutierrez; Chieh-Hsi Wu; Brennan Klein; David M. Pigott; Louis du Plessis; Nuno R Faria; Ruoran Li; William P. Hanage; John S Brownstein; Maylis Layan; Alessandro Vespignani; Huaiyu Tian; Christopher Dye; Simon Cauchemez; Oliver Pybus; Samuel V Scarpino 2020 2020-03-06 BioRxiv Y 10.1101/2020.03.02.20026708 yu89n6rq 0.376763 Griffiths_2010, Buseh_2015, Pai_M_2006, Li_C_2018, Zhou_2020 Liu_H_2020, Yuan_2020, Hou_J_2020, Prem_2020
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303 Diaz-Quijano_2020 Translating transmissibility measures into recommendations for coronavirus prevention Diaz-Quijano, Fredi Alexander; Rodriguez-Morales, Alfonso Javier; Waldman, Eliseu Alves 2020 2020-04-03 COMM-USE Y PMC7135119 10.11606/s1518-8787.2020054002471 4wlkftda 0.375947 Guery_2014, Mwabu_2008, Weiss_2003, Zhou_2020, von_der_Gracht_2010 de_Sousa_2014, Balasuriya_2013, Berto_2018, He_X_2020
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305 Yang_2020 Feasibility of Controlling COVID-19 Outbreaks in the UK by Rolling Interventions Po Yang; Jun Qi; Shuhao Zhang; Gaoshan Bi; Xulong Wang; Yun Yang; Bin Sheng; Xuxin Mao 2020 2020-04-07 BioRxiv Y 10.1101/2020.04.05.20054429 b6r6j1ek 0.375174 Griffiths_2010, Mondor_2012, Fielding_2014, Wei_B_2011, Buseh_2015 Yang_2020, Lai_S_2020, Kretzschmar_2020, Yuan_2020
306 Timen_2012 Retrospective Evaluation of Control Measures for Contacts of Patient with Marburg Hemorrhagic Fever Timen, Aura; Isken, Leslie D.; Willemse, Patricia; van den Berkmortel, Franchette; Koopmans, Marion P.G.; van Oudheusden, Danielle E.C.; Bleeker-Rovers, Chantal P.; Brouwer, Annemarie E.; Grol, Richard P.T.M.; Hulscher, Marlies E.J.L.; van Dissel, Jaap T. 2012 2012-07-23 PMC N PMC3376788 22710186.0 10.3201/eid1807.101638 mupt0so6 0.374373 Win_K_2011, Abdulrahim_2019, Herman_2007, Choi_2011, Pearson_2020 Le-Viet_2019, Ceylan_2013, Fernandes_2020, Kabwama_2017
307 Torneri_2020 A prospect on the use of antiviral drugs to control local outbreaks of COVID-19 Andrea Torneri; Pieter Jules Karel Libin; Joris Vanderlocht; Anne-Mieke Vandamme; Johan Neyts; Niel Hens 2020 2020-03-20 BioRxiv Y 10.1101/2020.03.19.20038182 9sr5b44k 0.373924 Polverino_2017, Wu_Q_2014, Mondor_2012, Li_C_2018, Lumby_2018 Devaux_2020, Wu_H_2016, Ceylan_2013
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309 Menkir_2020 Estimating the number of undetected COVID-19 cases exported internationally from all of China Tigist Ferede Menkir; Taylor Chin; James A Hay; Erik Surface; Pablo Martinez de Salazar; Caroline Buckee; Michael J Mina; Kamran Khan; Alexander Watts; Marc Lipsitch; Rene Niehus 2020 2020-03-26 BioRxiv Y 10.1101/2020.03.23.20038331 q96nsa22 0.373094 Griffiths_2010, Fielding_2014, Stenseth_2008, Lim_T_2012, Buseh_2015 Sun_H_2020, Tuite_2020, Fauver_2020, Yuan_2020
310 Gostic_2020 Estimated effectiveness of traveller screening to prevent international spread of 2019 novel coronavirus (2019-nCoV) Katelyn Gostic; Ana C. R. Gomez; Riley O. Mummah; Adam J. Kucharski; James O. Lloyd-Smith 2020 2020-01-30 BioRxiv Y 10.1101/2020.01.28.20019224 x22rc60j 0.372707 Mack_2007, Stenseth_2008, Coker_2007, Mooney_2013, Ropeik_2004 Gostic_2020, Rabaa_2015, de_Sousa_2014, Devaux_2020
311 Nakazawa_2020 Chronology of COVID-19 Cases on the Diamond Princess Cruise Ship and Ethical Considerations: A Report From Japan Nakazawa, Eisuke; Ino, Hiroyasu; Akabayashi, Akira 2020 2020-03-24 COMM-USE Y PMC7156812 32207674.0 10.1017/dmp.2020.50 23mtbo84 0.372502 Stenseth_2008, Griffiths_2010, Coker_2007, Rodier_2007, Mack_2007
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313 Hellmich_2017 Contact tracing with a real-time location system: A case study of increasing relative effectiveness in an emergency department Hellmich, Thomas R.; Clements, Casey M.; El-Sherif, Nibras; Pasupathy, Kalyan S.; Nestler, David M.; Boggust, Andy; Ernste, Vickie K.; Marisamy, Gomathi; Koenig, Kyle R.; Hallbeck, M. Susan 2017 2017-12-01 PMC N PMC7115342 28967513.0 10.1016/j.ajic.2017.08.014 rz9cwhm3 0.372133 Atkinson_2020, Mondor_2012, Amirov_2007, Knapp_2008, Laurens_2019 Mohr_2013, Racelis_2015, Breakwell_2015, Choi_2010
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315 Buhat_2020 A mathematical model of COVID-19 transmission between frontliners and the general public Christian Alvin H Buhat; Monica C Torres; Yancee H Olave; Maica Krizna A Gavina; Edd Francis O Felix; Gimelle B Gamilla; Kyrell Vann B Verano; Ariel L Babierra; Jomar Fajardo Rabajante 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.27.20045195 xdjgjeb9 0.370998 Mack_2007, Stenseth_2008, Coker_2007, Wei_B_2011, Looker_2006 Hilton_2020, Yuan_2020, Imran_2018, Kucharski_2015
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317 Cori_2013 A New Framework and Software to Estimate Time-Varying Reproduction Numbers During Epidemics Cori, Anne; Ferguson, Neil M.; Fraser, Christophe; Cauchemez, Simon 2013 2013-09-15 PMC N PMC3816335 24043437.0 10.1093/aje/kwt133 itr3b63z 0.370527 Polverino_2017, Höhle_2007, Bocharov_2018, Lloyd_2009, Cauchemez_2012 Safi_2011, Thompson_2019, Chong_2020, Kucharski_2015
318 Huang_2013 The construction of a hospital disease tracking and control system with a disease infection probability model Huang, Yi Chao; Xie, Qianyi 2013 2013-06-09 PMC N PMC7087954 10.1007/s10845-013-0796-0 4rulshop 0.370493 Mondor_2012, Polverino_2017, Lu_J_2020, Mwabu_2008, Coker_2007 Si_Y_2009, Kretzschmar_2020, Nishiura_2007, Cheng_2018
319 Truelove_2020 COVID-19: Projecting the impact in Rohingya refugee camps and beyond Shaun A Truelove; Orit Abrahim; Chiara Altare; Andrew Azman; Paul B Spiegel 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.27.20045500 6njag0dq 0.369851 Griffiths_2010, Mack_2007, Fielding_2014, Kruk_2008, Atkinson_2020 Chin_2019, Yuan_2020, Ergönül_2020, Shetty_2019
320 Vonnahme_2017 US Federal Travel Restrictions for Persons with Higher-Risk Exposures to Communicable Diseases of Public Health Concern Vonnahme, Laura A.; Jungerman, M. Robynne; Gulati, Reena K.; Illig, Petra; Alvarado-Ramy, Francisco 2017 2017-12-23 PMC N PMC5711296 29155659.0 10.3201/eid2313.170386 31w14qqf 0.369843 Atkinson_2020, Brucker_2020, Apisarnthanarak_2007, Mack_2007, Kruk_2008 Jungerman_2017, Gamage_2005, Garland-Lewis_2017, Shetty_2019
321 Schneider_2015 Evaluation of Patients under Investigation for MERS-CoV Infection, United States, January 2013–October 2014 Schneider, Eileen; Chommanard, Christina; Rudd, Jessica; Whitaker, Brett; Lowe, Luis; Gerber, Susan I. 2015 2015-07-23 PMC N PMC4480388 26079433.0 10.3201/eid2107.141888 86smbov4 0.369806 Lim_T_2012, Kim_D_2016, Wang_2014, Sousou_2015, Buseh_2015 Aleanizy_2017, Rubio_2017, Kim_S_2017
322 Hochberg_2020 Countries should aim to lower the reproduction number R close to 1.0 for the short-term mitigation of COVID-19 outbreaks Michael E. Hochberg 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.14.20065268 f36smzln 0.369443 Mack_2007, Coker_2007, Stenseth_2008, Mwabu_2008, UNKNOWN_2019
323 Zhao_2020 Modelling the coronavirus disease (COVID-19) outbreak on the Diamond Princess ship using the public surveillance data from January 20 to February 20, 2020 Shi Zhao; Peihua Cao; Daozhou Gao; Zian Zhuang; Marc Chong; Yongli Cai; Jinjun Ran; Kai Wang; Yijun Lou; Weiming Wang; Lin Yang; Daihai He; Maggie H Wang 2020 2020-02-29 BioRxiv Y 10.1101/2020.02.26.20028449 onkdv388 0.369344 UNKNOWN_2010, Mack_2007, Polverino_2017, Walker_2010, Wiwanitkit_2014 Yong_2016, Xia_W_2020, Chinazzi_2020, Alagaili_2014
324 Nishiura_2020 The Extent of Transmission of Novel Coronavirus in Wuhan, China, 2020 Nishiura, Hiroshi; Jung, Sung-mok; Linton, Natalie M.; Kinoshita, Ryo; Yang, Yichi; Hayashi, Katsuma; Kobayashi, Tetsuro; Yuan, Baoyin; Akhmetzhanov, Andrei R. 2020 2020-01-01 COMM-USE Y PMC7073674 31991628.0 10.3390/jcm9020330 cg4ess9h 0.369344 Pearson_2020, Scheuerl_2020, Wang_2014, Mavalankar_2008, Hanke_2015 Zhu_N_2020, Cheng_2020, Bassetti_2020, Lachheb_2019
325 Mukherjee_2010 Epidemiology of Travel-associated Pandemic (H1N1) 2009 Infection in 116 Patients, Singapore Mukherjee, Pratik; Lim, Poh Lian; Chow, Angela; Barkham, Timothy; Seow, Eillyne; Win, Mar Kyaw; Chua, Arlene; Leo, Yee Sin; Chen, Mark I-Cheng 2010 2010-01-23 PMC N PMC2874386 20031038.0 10.3201/eid1601.091376 be8v9kuu 0.368420 Lim_T_2012, Esswein_2004, Kim_D_2016, Deng_2015 Park_2016, Assiri_2016, Gamiño‐Arroyo_2016
326 Shen_2020 Modelling the epidemic trend of the 2019 novel coronavirus outbreak in China Mingwang Shen; Zhihang Peng; Yanni Xiao; Lei Zhang 2020 2020-01-25 BioRxiv Y 10.1101/2020.01.23.916726 59rcogfc 0.368419 Mack_2007, Buseh_2015, Weiss_2003, von_der_Gracht_2010, Wiwanitkit_2014 Zhao_2007, Chinazzi_2020, Wang_2020
327 Cao_J_2014 Communicating and Monitoring Surveillance and Response Activities for Malaria Elimination: China's “1-3-7” Strategy Cao, Jun; Sturrock, Hugh J. W.; Cotter, Chris; Zhou, Shuisen; Zhou, Huayun; Liu, Yaobao; Tang, Linhua; Gosling, Roly D.; Feachem, Richard G. A.; Gao, Qi 2014 2014-05-13 COMM-USE N PMC4019513 24824170.0 10.1371/journal.pmed.1001642 evgfkex6 0.368417 Griffiths_2010, Rusoke-Dierich_2018, Buseh_2015, Knapp_2008 Ryu_S_2020, Feng_2018, Ding_2018, Ishtiaq_2018
328 Drake_2006 Societal Learning in Epidemics: Intervention Effectiveness during the 2003 SARS Outbreak in Singapore Drake, John M.; Chew, Suok Kai; Ma, Stefan 2006 2006-12-20 COMM-USE N PMC1762333 17183647.0 10.1371/journal.pone.0000020 odzrco6q 0.366584 Stenseth_2008, Mack_2007, Mondor_2012, Atkinson_2020, UNKNOWN_2010 Loberg_2020, Grubaugh_2018, Colizza_2007, Grubaugh_2019
329 Racelis_2015 Contact tracing the first Middle East respiratory syndrome case in the Philippines, February 2015 Racelis, Sheryl; de los Reyes, Vikki Carr; Sucaldito, Ma Nemia; Deveraturda, Imelda; Roca, John Bobbie; Tayag, Enrique 2015 2015-07-27 PMC N PMC4675163 26668760.0 10.5365/wpsar.2015.6.2.012 ani5jfiz 0.365720 Atkinson_2020, Laurens_2019, Rusoke-Dierich_2018, Shah_2017, UNKNOWN_2010 Reuss_2014, Balkhy_2016, Aleanizy_2017
330 El_Bushra_2017 Outcome of strict implementation of infection prevention control measures during an outbreak of Middle East respiratory syndrome El Bushra, Hassan E.; Al Arbash, Hussain A.; Mohammed, Mutaz; Abdalla, Osman; Abdallah, Mohamed N.; Al-Mayahi, Zayid K.; Assiri, Abdallah M.; BinSaeed, Abdulaziz A. 2017 2017-05-01 PMC N PMC7132728 28189413.0 10.1016/j.ajic.2016.12.020 thcl3h0k 0.365583 Pearson_2020, Mondor_2012, Win_K_2011, Laurens_2019, Ishizaki_2004 Balkhy_2016, Kumar_2017, Aleanizy_2017
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332 Little_2014 Using HIV Networks to Inform Real Time Prevention Interventions Little, Susan J.; Kosakovsky Pond, Sergei L.; Anderson, Christy M.; Young, Jason A.; Wertheim, Joel O.; Mehta, Sanjay R.; May, Susanne; Smith, Davey M. 2014 2014-06-05 COMM-USE N PMC4047027 24901437.0 10.1371/journal.pone.0098443 yxne28f0 0.365013 Naito_2007, Lumby_2018, Zhou_2020, Pai_M_2006 Lau_J_2013, Ye_S_2012, Stein_2014, Zhang_2012
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334 Nah_K_2016 Estimating risks of importation and local transmission of Zika virus infection Nah, Kyeongah; Mizumoto, Kenji; Miyamatsu, Yuichiro; Yasuda, Yohei; Kinoshita, Ryo; Nishiura, Hiroshi 2016 2016-04-05 COMM-USE N PMC4824915 27069825.0 10.7717/peerj.1904 2b2rnkpz 0.364584 Lu_P_2016, Brucker_2020, Webster_2006, Ye_F_2019, Cinti_2005 Napp_2018, Díaz-Menéndez_2017, dos_Santos_2018, Imran_2018
335 Tuomisto_2020 An agent-based epidemic model REINA for COVID-19 to identify destructive policies Jouni T Tuomisto; Juha Yrjölä; Mikko Kolehmainen; Juhani Bonsdorff; Jami Pekkanen; Tero Tikkanen 2020 2020-04-14 BioRxiv Y 10.1101/2020.04.09.20047498 9qdl3jt9 0.364384 Coker_2007, Mwabu_2008, Stenseth_2008, Zhou_2020, Mack_2007 Ng_T_2003, Rabaa_2015, Kretzschmar_2020
336 Killeen_2020 Why lockdown? Simplified arithmetic tools for decision-makers, health professionals, journalists and the general public to explore containment options for the novel coronavirus Gerry Killeen; Samson Kiware 2020 2020-04-20 BioRxiv Y 10.1101/2020.04.15.20066845 io2f52kn 0.364370 Mack_2007, Stenseth_2008, Coker_2007, Kruk_2008, Rusoke-Dierich_2018
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338 Ishola_2011 Could influenza transmission be reduced by restricting mass gatherings? Towards an evidence-based policy framework Ishola, David A.; Phin, Nick 2011 2011-12-31 PMC N PMC7104184 23856374.0 10.1016/j.jegh.2011.06.004 peppszqx 0.361293 UNKNOWN_2010, Nelson_2012, Nelson_2012, Walker_2010, Lipsitch_2014 Offeddu_2016, Milne_2020, Jackson-Lee_2016, Halton_2013
339 Shen_2004 Superspreading SARS Events, Beijing, 2003 Shen, Zhuang; Ning, Fang; Zhou, Weigong; He, Xiong; Lin, Changying; Chin, Daniel P.; Zhu, Zonghan; Schuchat, Anne 2004 2004-02-23 PMC N PMC3322930 15030693.0 10.3201/eid1002.030732 ikx68zp0 0.361082 Choi_2017, Win_K_2011, Choi_2011, Azziz-Baumgartner_2012, Pang_2011 Wang_2020, Oh_M_2015, Lau_J_2004
340 Li_P_2020 Transmission of COVID-19 in the terminal stage of incubation period: a familial cluster Li, Peng; Fu, Ji-Bo; Li, Ke-Feng; Chen, Yan; Wang, Hong-Ling; Liu, Lei-Jie; Liu, Jie-Nan; Zhang, Yong-Li; Liu, She-Lan; Tang, An; Tong, Zhen-Dong; Yan, Jian-Bo 2020 2020-03-16 PMC Y 10.1016/j.ijid.2020.03.027 aul6ahww 0.361040 Seong_2016, Walker_2010, Guberina_2013, Mondor_2012 Yu_P_2020, Han_Y_2020, Xia_W_2020, Tilocca_2020
341 Cousien_2019 Assessing Zika Virus Transmission Within Households During an Outbreak in Martinique, 2015–2016 Cousien, Anthony; Abel, Sylvie; Monthieux, Alice; Andronico, Alessio; Calmont, Isabelle; Cervantes, Minerva; Césaire, Raymond; Gallian, Pierre; de Lamballerie, Xavier; Laouénan, Cédric; Najioullah, Fatiha; Pierre-François, Sandrine; Pircher, Mathilde; Salje, Henrik; ten Bosch, Quirine A; Cabié, André; Cauchemez, Simon 2019 2019-04-17 None N PMC6601520 30995296.0 10.1093/aje/kwz091 a2m0mdd1 0.360898 Muniz-Rodriguez_2020, Zhuang_2020, Choi_2017, Gao_Y_2020, Rossi_2020 Otomaru_2019, Berto_2018, Munywoki_2015, Agoti_2019
342 Zhang_2020 Evolving epidemiology of novel coronavirus diseases 2019 and possible interruption of local transmission outside Hubei Province in China: a descriptive and modeling study Juanjuan Zhang; Maria Litvinova; Wei Wang; Yan Wang; Xiaowei Deng; Xinghui Chen; Mei Li; Wen Zheng; Lan Yi; Xinhua Chen; Qianhui Wu; Yuxia Liang; Xiling Wang; Juan Yang; Kaiyuan Sun; Ira M. Longini; M. Elizabeth Halloran; Peng Wu; Benjamin J. Cowling; Stefano Merler; Cecile Viboud; Alessandro Vespignani; Marco Ajelli; Hongjie Yu 2020 2020-02-23 BioRxiv Y 10.1101/2020.02.21.20026328 ragcpbl6 0.360260 Lim_T_2012, Lin_Q_2020, Muniz-Rodriguez_2020, Ma_X_2020, Tomie_2020 Zhang_2020, Wang_2020, Zeng_2017, El-Kafrawy_2019
343 Lauer_2020 The Incubation Period of Coronavirus Disease 2019 (COVID-19) From Publicly Reported Confirmed Cases: Estimation and Application Lauer, Stephen A.; Grantz, Kyra H.; Bi, Qifang; Jones, Forrest K.; Zheng, Qulu; Meredith, Hannah R.; Azman, Andrew S.; Reich, Nicholas G.; Lessler, Justin 2020 2020-03-10 PMC Y PMC7081172 32150748.0 10.7326/m20-0504 8anqfkmo 0.359877 Lim_T_2012, Rodier_2007, Ma_X_2020, Esswein_2004, Howard_2016 Lescure_2020, Xing_2020, Cao_M_2020, Xia_W_2020
344 Jenny_2020 Dynamic Modeling to Identify Mitigation Strategies for Covid-19 Pandemic Patrick Jenny; David F Jenny; Hossein Gorji; Markus Arnoldini; Wolf-Dietrich Hardt 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.27.20045237 ngsstnpr 0.359645 Stenseth_2008, Coker_2007, Mack_2007, Looker_2006, Zheng_2020 Kim_K_2020, Esteban_2020, Einian_2020
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346 Qureshi_2016 Chapter 4 Ebola Virus Disease Epidemic in Light of Other Epidemics Qureshi, Adnan I 2016 2016-12-31 PMC N PMC7149723 10.1016/b978-0-12-804230-4.00004-2 2paevjki 0.358377 Walker_2010, Buseh_2015, Cinti_2005, Weiss_2003 Balasuriya_2013, Santos_2013, Wong_2010, Leroy_2012
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348 Cooper_2009 Transmission of SARS in three Chinese hospitals Cooper, Ben S.; Fang, Li‐Qun; Zhou, Jie‐Ping; Feng, Dan; Lv, Hui; Wei, Mao‐Ti; Wang, Shi‐Xin; Cao, Wu‐Chun; De Vlas, Sake J. 2009 2009-10-07 PMC N PMC7169696 19814763.0 10.1111/j.1365-3156.2009.02346.x c2bmjxx3 0.358042 Pearson_2020, Win_K_2011, Mondor_2012, Choi_2011, Griffiths_2010
349 Utsunomiya_2020 Growth rate and acceleration analysis of the COVID-19 pandemic reveals the effect of public health measures in real time Yuri Tani Utsunomiya; Adam Taiti Harth Utsunomiya; Rafaela Beatriz Pintor Torrecilha; Silvana Cassia Paulan; Marco Milanesi; Jose Fernando Garcia 2020 2020-04-02 BioRxiv Y 10.1101/2020.03.30.20047688 39ywzw6a 0.357671 Li_C_2018, Welch_2011, Wu_Q_2014, Liu_Z_2020, Zhou_2020 Smeets_2020, Filho_2020, Kraemer_2020, Oliveiros_2020
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353 Park_2016 Outbreaks of Middle East Respiratory Syndrome in Two Hospitals Initiated by a Single Patient in Daejeon, South Korea Park, Sun Hee; Kim, Yeon-Sook; Jung, Younghee; Choi, Soo young; Cho, Nam-Hyuk; Jeong, Hye Won; Heo, Jung Yeon; Yoon, Ji Hyun; Lee, Jacob; Cheon, Shinhye; Sohn, Kyung Mok 2016 2016-06-30 NONCOMM N PMC4945733 27433380.0 10.3947/ic.2016.48.2.99 soiimy63 0.356485 Kim_D_2016, Lim_T_2012, Ma_X_2020, Georgiev_2009, Laurens_2019 UNKNOWN_2015, Khalid_2014, Cho_S_2016
354 Shao_2020 Impact of city and residential unit lockdowns on prevention and control of COVID-19 Peng Shao 2020 2020-03-17 BioRxiv Y 10.1101/2020.03.13.20035253 fkwskhfk 0.356266 Fielding_2014, Coker_2007, Zhou_2020, Griffiths_2010, Mwabu_2008 Yuan_2020, Ribeiro_2020, dos_Santos_2018
355 Park_2020 Changes in Subway Ridership in Response to COVID-19 in Seoul, South Korea: Implications for Social Distancing Park, Jewel 2020 2020-04-14 COMM-USE Y PMC7163336 10.7759/cureus.7668 l3rria7o 0.356089 Griffiths_2010, Fielding_2014, Lim_T_2012, Mondor_2012, Ma_X_2020
356 Li_Y_2004 Predicting Super Spreading Events during the 2003 Severe Acute Respiratory Syndrome Epidemics in Hong Kong and Singapore Li, Yuguo; Yu, Ignatius T. S.; Xu, Pengcheng; Lee, J. H. W.; Wong, Tze Wai; Ooi, Peng Lim; Sleigh, Adrian C. 2004 2004-10-15 PMC N PMC7109976 15466494.0 10.1093/aje/kwh273 axns3ukm 0.355623 Li_C_2018, Zhang_2019, Scheuerl_2020, Welch_2011, Knipl_2016 UNKNOWN_2015, Balkhy_2016, Lee_S_2015
357 Zhao_2020 Analysis of the epidemic growth of the early 2019-nCoV outbreak using internationally confirmed cases Qingyuan Zhao; Yang Chen; Dylan S Small 2020 2020-02-09 BioRxiv Y 10.1101/2020.02.06.20020941 ra3t6kmm 0.354934 Griette_2020, batista_2020, Li_C_2018, Kenah_2012, batista_2020 Xia_W_2020, Tang_2020
358 He_Y_2020 Public health might be endangered by possible prolonged discharge of SARS-CoV-2 in stool He, Yu; Wang, Zhengli; Li, Fang; Shi, Yuan 2020 2020-05-31 PMC Y 32145217.0 10.1016/j.jinf.2020.02.031 3pyu8ucs 0.354458 Lu_P_2016, Walker_2010, Stenseth_2008, Li_D_2014, Karlsson_2012 Chen_2020, Xu_D_2005, Nicastri_2020, Xing_2020
359 Gastañaduy_2017 Assessment of the Status of Measles Elimination in the United States, 2001–2014 Gastañaduy, Paul A.; Paul, Prabasaj; Fiebelkorn, Amy Parker; Redd, Susan B.; Lopman, Ben A.; Gambhir, Manoj; Wallace, Gregory S. 2017 2017-04-01 None N PMC7110139 28338902.0 10.1093/aje/kww168 yxcw10bo 0.353771 Largo_2016, Choudhury_2011, David_2013, Abou-Hamdan_2018, Muniz-Rodriguez_2020 Gastañaduy_2019, Chong_2018, Premaratna_2017, Otomaru_2019
360 Munasinghe_2019 Quantifying heterogeneous contact patterns in Japan: a social contact survey Munasinghe, Lankeshwara; Asai, Yusuke; Nishiura, Hiroshi 2019 2019-03-20 COMM-USE N PMC6425701 30890153.0 10.1186/s12976-019-0102-8 zovatjw0 0.353602 Lipsitch_2014, Griffiths_2010, Rusoke-Dierich_2018, UNKNOWN_2010, Polverino_2017 Chen_2007, Stein_2015, Stein_2014, Leung_2017
361 Xu_L_2020 Highland of COVID-19 outside Hubei: epidemic characteristics, control and projections of Wenzhou, China Liangde Xu; Jian Yuan; Yaru Zhang; Guosi Zhang; Fan Lu; Jianzhong Su; Jia Qu 2020 2020-02-29 BioRxiv N 10.1101/2020.02.25.20024398 acmfhbtm 0.353547 Lim_T_2012, Ma_X_2020, Georgiev_2009, Lin_Q_2020 He_J_2020, Ping_2020, Wen_Y_2020, Wang_2020
362 Wood_2020 COVID-19 scenario modelling for the mitigation of capacity-dependent deaths in intensive care: computer simulation study Richard M Wood; Christopher J McWilliams; Matthew J Thomas; Christopher P Bourdeaux; Christos Vasilakis 2020 2020-04-06 BioRxiv Y 10.1101/2020.04.02.20050898 e79k4q76 0.353244 Atkinson_2020, Coker_2007, Mwabu_2008, Amirov_2007, Wei_B_2011 Weissman_2020, Davies_2020, Massonnaud_2020, Zhang_2020
363 Heijne_2009 Enhanced Hygiene Measures and Norovirus Transmission during an Outbreak Heijne, Janneke C.M.; Teunis, Peter; Morroy, Gabriella; Wijkmans, Clementine; Oostveen, Sandy; Duizer, Erwin; Kretzschmar, Mirjam; Wallinga, Jacco 2009 2009-01-23 None N PMC2660689 19116045.0 10.3201/1501.080299 t7004uw2 0.352837 Atkinson_2020, Mack_2007, Pai_M_2006, Brucker_2020, Mondor_2012 Turcios-Ruiz_2008, Alfieri_2016, Turner_1988, Bing-Yuan_2018
364 Zhang_2020 Prevent the resurgence of infectious disease with asymptomatic carriers Zhechun Zhang 2020 2020-04-19 BioRxiv Y 10.1101/2020.04.16.20067652 r2mwzzaw 0.352805 Stenseth_2008, Mack_2007, Coker_2007, Looker_2006, Zheng_2020
365 Cooper_2006 Delaying the International Spread of Pandemic Influenza Cooper, Ben S; Pitman, Richard J; Edmunds, W. John; Gay, Nigel J 2006 2006-05-02 COMM-USE N PMC1450020 16640458.0 10.1371/journal.pmed.0030212 kzhj0efp 0.351537 Mack_2007, Stenseth_2008, Santos-Preciado_2009, Cinti_2005, Brucker_2020 Singh_2010, Van_Hoeven_2009, Stephenson_2004, Wong_2007
366 Hernandez_2020 The Impact of Host-Based Early Warning on Disease Outbreaks Mark Hernandez; Lauren E Milechin; Shakti K Davis; Rich DeLaura; Kajal T Claypool; Albert Swiston 2020 2020-03-08 BioRxiv N 10.1101/2020.03.06.20029793 8874c8jp 0.350256 Zhou_2020, Mwabu_2008, Mack_2007, Wei_B_2011, Kruk_2008 Glennon_2020, Rabaa_2015, Popescu_2019, Tambo_2014
367 Poletto_2016 Risk of MERS importation and onward transmission: a systematic review and analysis of cases reported to WHO Poletto, Chiara; Boëlle, Pierre-Yves; Colizza, Vittoria 2016 2016-08-25 None N PMC5000488 27562369.0 10.1186/s12879-016-1787-5 4q5ttptg 0.350233 Griffiths_2010, Lipsitch_2014, Mondor_2012, Buseh_2015, Wei_B_2011 dos_Santos_2018, Reeves_2015, Díaz-Menéndez_2017, Filho_2020
368 Shen_2020 Lockdown may partially halt the spread of 2019 novel coronavirus in Hubei province, China Mingwang Shen; Zhihang Peng; Yuming Guo; Yanni Xiao; Lei Zhang 2020 2020-02-13 BioRxiv Y 10.1101/2020.02.11.20022236 tzdgc3dw 0.350029 Coker_2007, von_der_Gracht_2010, Mwabu_2008, Wei_B_2011, Alves_2007 Wang_2020, He_J_2020, Yuan_2020, Wu_H_2016
369 Pepe_2020 COVID-19 outbreak response: a first assessment of mobility changes in Italy following national lockdown Emanuele Pepe; Paolo Bajardi; Laetitia Gauvin; Filippo Privitera; Brennan Lake; Ciro Cattuto; Michele Tizzoni 2020 2020-03-27 BioRxiv Y 10.1101/2020.03.22.20039933 sgkuqcq6 0.350015 Griffiths_2010, Fielding_2014, Mondor_2012, Li_C_2018 Ribeiro_2020, Santamaria_2020, Kraemer_2020, Liu_H_2020
370 Zhong_2004 Epidemiology of severe acute respiratory syndrome (SARS): adults and children Zhong, Nan-Shan; Wong, Gary W.K. 2004 2004-12-31 PMC N PMC7106189 15531250.0 10.1016/j.prrv.2004.07.011 ihq2cpe6 0.350010 Kim_D_2016, Lim_T_2012, Georgiev_2009, Deng_2015 Al-Tawfiq_2016, UNKNOWN_2015, Gamiño‐Arroyo_2016
371 SUN_P_2020 An SEIR Model for Assessment of Current COVID-19 Pandemic Situation in the UK Peiliang SUN; Kang Li 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.12.20062588 9mdxid0u 0.349540 Li_C_2018, Wu_Q_2014, Sadun_2020, Guery_2014, Scheuerl_2020
372 Schwartz_2020 Predicting the impact of asymptomatic transmission, non-pharmaceutical intervention and testing on the spread of COVID19 COVID19 Ira B Schwartz; James H Kaufman; Kun Hu; Simone Bianco 2020 2020-04-22 BioRxiv Y 10.1101/2020.04.16.20068387 6okpsuvu 0.349433 Stenseth_2008, Coker_2007, Mack_2007, Mwabu_2008, Lauro_2020
373 Hollingsworth_2007 Frequent Travelers and Rate of Spread of Epidemics Hollingsworth, T. Déirdre; Ferguson, Neil M.; Anderson, Roy M. 2007 2007-09-23 PMC N PMC2857283 18252097.0 10.3201/eid1309.070081 dxo8l9gu 0.349433 Mack_2007, Atkinson_2020, Stenseth_2008, Cinti_2005 Zhang_2019, Korzeniewski_2014, Ruan_2015
374 Rodriguez_2020 A mechanistic population balance model to evaluate the impact of interventions on infectious disease outbreaks: Case for COVID19 Jorge Rodriguez; Juan M Acuna; Joao M Uratani; Mauricio Paton 2020 2020-04-07 BioRxiv Y 10.1101/2020.04.04.20053017 vmsq5hhz 0.348937 Mack_2007, Polverino_2017, Stenseth_2008, Li_C_2018, Looker_2006 Bucini_2019, Rabaa_2015, Safi_2011, Chowell_2015
375 Scarabel_2020 Canada needs to rapidly escalate public health interventions for its COVID-19 mitigation strategies Scarabel, Francesca; Pellis, Lorenzo; Bragazzi, Nicola Luigi; Wu, Jianhong 2020 2020-03-31 PMC Y 10.1016/j.idm.2020.03.004 vwwt70mo 0.348717 Griffiths_2010, Coker_2007, Rodier_2007, Fielding_2014, Wei_B_2011 Ke_R_2020, Tuite_2020
376 Soucy_2020 Estimating the effect of physical distancing on the COVID-19 pandemic using an urban mobility index Jean-Paul R. Soucy; Shelby L. Sturrock; Isha Berry; Nick Daneman; Derek R. MacFadden; Kevin A. Brown 2020 2020-04-07 BioRxiv Y 10.1101/2020.04.05.20054288 radi0wlh 0.348671 Griffiths_2010, Zhou_2020, Wei_B_2011, Fielding_2014, Mwabu_2008 Liu_H_2020, Kraemer_2020, Malik_2020, dos_Santos_2018
377 Ohkusa_2005 Prediction of smallpox outbreak and evaluation of control-measure policy in Japan, using a mathematical model Ohkusa, Yasushi; Taniguchi, Kiyosu; Okubo, Ichiro 2005 2005-12-31 None N PMC7087876 15856374.0 10.1007/s10156-005-0373-3 1kpooq3j 0.347637 Mack_2007, Stenseth_2008, Griffiths_2010, Coker_2007, Kruk_2008 Chin_2019, Yuan_2020, Kretzschmar_2004, Safi_2011
378 zheming_2020 A simple model to assess Wuhan lock-down effect and region efforts during COVID-19 epidemic in China Mainland Yuan zheming; Chen Yuan 2020 2020-03-03 BioRxiv Y 10.1101/2020.02.29.20029561 3kp3ptbn 0.347415 Lim_T_2012, Ma_X_2020, Griffiths_2010, Rodier_2007, Xu_L_2020 Yuan_2020, He_J_2020, Hou_J_2020, Huang_2020
379 Rahimi_2020 Challenges of managing the asymptomatic carriers of SARS-CoV-2 Rahimi, Farid; Bezmin Abadi, Amin Talebi 2020 2020-04-18 PMC Y 10.1016/j.tmaid.2020.101677 c5q7l7en 0.346859 Mack_2007, Atkinson_2020, Kruk_2008, Stenseth_2008, Rusoke-Dierich_2018
380 Oshitani_2006 Potential benefits and limitations of various strategies to mitigate the impact of an influenza pandemic Oshitani, Hitoshi 2006 2006-12-31 None N PMC7088021 16944252.0 10.1007/s10156-006-0453-z msp7p2ef 0.346248 Mooney_2013, Brucker_2020, Walker_2010, Singh_2010, Lu_P_2016 Singh_2010, Berry_2014, Banerjee_2010, De_Clercq_2007
381 Qiu_C_2014 Epidemiologic report and serologic findings for household contacts of three cases of influenza A (H7N9) virus infection Qiu, Chao; Yuan, Songhua; Tian, Di; Yang, Yu; Zhang, Anli; Chen, Qingguo; Wan, Yanmin; Song, Zhigang; He, Jing; Li, Liangzhu; Sun, Jun; Zhou, Mingzhe; Qiu, Chenli; Zhang, Zhiyong; Lu, Shuihua; Zhang, Xiaoyan; Hu, Yunwen; Xu, Jianqing 2014 2014-02-28 PMC N PMC7106538 24388209.0 10.1016/j.jcv.2013.12.004 wau2xq0x 0.345690 Lu_P_2016, Karlsson_2012, Yasui_2016, Tallmadge_2008 Munywoki_2015, Gamiño‐Arroyo_2016
382 Ejima_2014 Probabilistic differential diagnosis of Middle East respiratory syndrome (MERS) using the time from immigration to illness onset among imported cases Ejima, Keisuke; Aihara, Kazuyuki; Nishiura, Hiroshi 2014 2014-04-07 PMC N PMC7094128 24406808.0 10.1016/j.jtbi.2013.12.024 v9hw1cdi 0.345584 Mack_2007, Mondor_2012, van_der_Weijden_2010, Li_C_2018, Light_2009 Alfaraj_2019, Aleanizy_2017, Balkhy_2016
383 Chowell_2014 Synthesizing data and models for the spread of MERS-CoV, 2013: Key role of index cases and hospital transmission Chowell, Gerardo; Blumberg, Seth; Simonsen, Lone; Miller, Mark A.; Viboud, Cécile 2014 2014-12-31 None N PMC4258236 25480133.0 10.1016/j.epidem.2014.09.011 kpbpqsxj 0.345255 Li_C_2018, UNKNOWN_2010, Pai_M_2006, Mondor_2012, Cinti_2005 Breban_2013, Aleanizy_2017, Grant_2019, MacIntyre_2014
384 Wang_2014 How Change of Public Transportation Usage Reveals Fear of the SARS Virus in a City Wang, Kuo-Ying 2014 2014-03-19 COMM-USE N PMC3960095 24647278.0 10.1371/journal.pone.0089405 gymjr9i1 0.344407 Atkinson_2020, Mondor_2012, Griffiths_2010, Fielding_2014, Mack_2007 Kim_C_2017, dos_Santos_2018, Ribeiro_2020, Hung_2018
385 Shlomai_2020 Global versus focused isolation during the SARS-CoV-2 pandemic-A cost-effectiveness analysis Amir Shlomai; Ari Leshno; Ella H Sklan; Moshe Leshno 2020 2020-04-01 BioRxiv Y 10.1101/2020.03.30.20047860 1mpp7sbt 0.344184 Mack_2007, Polverino_2017, Mwabu_2008, Zhou_2020, Griffiths_2010 Skums_2020, Kim_K_2020, Wu_F_2020, Rockx_2011
386 Yang_2017 Estimating the incubation period of hand, foot and mouth disease for children in different age groups Yang, Zhongzhou; Zhang, Qiqi; Cowling, Benjamin J.; Lau, Eric H. Y. 2017 2017-11-28 COMM-USE N PMC5705633 29184105.0 10.1038/s41598-017-16705-7 gkvmjozy 0.343437 Muniz-Rodriguez_2020, Pearson_2020, Win_K_2011, Cowling_2008 Hwang_2018, Haidopoulou_2010, Le-Viet_2019
387 Nishiura_2011 Fever screening during the influenza (H1N1-2009) pandemic at Narita International Airport, Japan Nishiura, Hiroshi; Kamiya, Kazuko 2011 2011-05-03 COMM-USE N PMC3096599 21539735.0 10.1186/1471-2334-11-111 fn4gzsw1 0.342982 Walker_2010, Choi_2011, Choi_2017, Yang_2010, Marchand-Austin_2009 Kuan_2012, Nougairède_2010, Park_2015, Chen_2018
388 Skowronski_2006 Coordinated Response to SARS, Vancouver, Canada Skowronski, Danuta M.; Petric, Martin; Daly, Patricia; Parker, Robert A.; Bryce, Elizabeth; Doyle, Patrick W.; Noble, Michael A.; Roscoe, Diane L.; Tomblin, Joan; Yang, Tung C.; Krajden, Mel; Patrick, David M.; Pourbohloul, Babak; Goh, Swee Han; Bowie, William R.; Booth, Tim F.; Tweed, S. Aleina; Perry, Thomas L.; McGeer, Allison; Brunham, Robert C. 2006 2006-01-23 PMC N PMC3291383 16494736.0 10.3201/eid1201.050327 par4663x 0.341504 Lim_T_2012, Esswein_2004, Rodier_2007, Georgiev_2009 Ha_L_2004, Wilder-Smith_2006
389 Mummert_2013 Get the News Out Loudly and Quickly: The Influence of the Media on Limiting Emerging Infectious Disease Outbreaks Mummert, Anna; Weiss, Howard 2013 2013-08-26 COMM-USE N PMC3753329 23990974.0 10.1371/journal.pone.0071692 6zployed 0.341478 Mack_2007, Stenseth_2008, Atkinson_2020, Kruk_2008, Ropeik_2004 Kim_L_2019, Herrera-Diestra_2019, Grubaugh_2019
390 Harris_2013 Does spatial proximity drive norovirus transmission during outbreaks in hospitals? Harris, John P; Lopman, Ben A; Cooper, Ben S; O'Brien, Sarah J 2013 2013-07-12 None N PMC3710976 23852138.0 10.1136/bmjopen-2013-003060 2rvdedui 0.340629 Polverino_2017, Mondor_2012, Li_C_2018, Scheuerl_2020 dos_Santos_2018, Choi_2010, Robert_2020
391 Pei_S_2018 Inference and control of the nosocomial transmission of methicillin-resistant Staphylococcus aureus Pei, Sen; Morone, Flaviano; Liljeros, Fredrik; Makse, Hernán; Shaman, Jeffrey L 2018 2018-12-18 COMM-USE N PMC6298769 30560786.0 10.7554/elife.40977 0dut9fjn 0.340506 Pai_M_2006, Amirov_2007, Stenseth_2008, Mwabu_2008, Zhou_2020 Andraud_2011, Bing-Yuan_2018, Villacís_2020, Timoney_1984
392 Cowling_2010 The effective reproduction number of pandemic influenza: Prospective estimation Cowling, Benjamin J.; Lau, Max S. Y.; Ho, Lai-Ming; Chuang, Shuk-Kwan; Tsang, Thomas; Liu, Shao-Haei; Leung, Pak-Yin; Lo, Su-Vui; Lau, Eric H. Y. 2010 2010-11-01 PMC N PMC3084966 20805752.0 10.1097/ede.0b013e3181f20977 gkia3rx4 0.340506 Walker_2010, Brucker_2020, Cinti_2005, Lu_P_2016, UNKNOWN_2010 Chowell_2006, Yamauchi_2019, Routledge_2019, Kucharski_2015
393 Pike_2020 An international comparison of the second derivative of COVID-19 deaths after implementation of social distancing measures William Thomas Pike; Vikas Saini 2020 2020-03-25 BioRxiv Y 10.1101/2020.03.25.20041475 ln26bux8 0.339913 Griffiths_2010, Fielding_2014, Wei_B_2011, Stenseth_2008, Buseh_2015 Milne_2020, Klausner_2020, Yuan_2020, Anderson_2020
394 Canabarro_2020 Data-Driven Study of the the COVID-19 Pandemic via Age-Structured Modelling and Prediction of the Health System Failure in Brazil amid Diverse Intervention Strategies Askery Canabarro; Elayne Tenorio; Renato Martins; Lais Martins; Samurai Brito; Rafael Chaves 2020 2020-04-08 BioRxiv Y 10.1101/2020.04.03.20052498 kyy4z4wu 0.339840 Coker_2007, Stenseth_2008, Mack_2007, Mwabu_2008, Wei_B_2011 Smeets_2020, Massonnaud_2020, Filho_2020
395 Eikenberry_2020 To mask or not to mask: Modeling the potential for face mask use by the general public to curtail the COVID-19 pandemic Steffen E. Eikenberry; Marina Mancuso; Enahoro Iboi; Tin Phan; Keenan Eikenberry; Yang Kuang; Eric Kostelich; Abba B. Gumel 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.06.20055624 28utunid 0.339595 Mack_2007, Li_C_2018, Stenseth_2008, Kruk_2008, Wei_B_2011 Worby_2020, MacIntyre_2009, Kenyon_2020
396 Poletto_2016 Quantifying spatiotemporal heterogeneity of MERS-CoV transmission in the Middle East region: A combined modelling approach Poletto, Chiara; Colizza, Vittoria; Boëlle, Pierre-Yves 2016 2016-06-30 PMC N PMC7104927 27266844.0 10.1016/j.epidem.2015.12.001 qejtarkd 0.339477 Li_C_2018, Swift_2007, Lumby_2018, Blumberg_2020, Mondor_2012 Reeves_2015, Routledge_2019, Hou_J_2020, Kretzschmar_2020
397 Zhang_2017 Estimating and modelling the transmissibility of Middle East Respiratory Syndrome CoronaVirus during the 2015 outbreak in the Republic of Korea Zhang, Xu‐Sheng; Pebody, Richard; Charlett, Andre; de Angelis, Daniela; Birrell, Paul; Kang, Hunseok; Baguelin, Marc; Choi, Yoon Hong 2017 2017-08-17 COMM-USE N PMC5598245 28703921.0 10.1111/irv.12467 rla49fx0 0.339371 Li_C_2018, Buseh_2015, Pai_M_2006, Polverino_2017, Zhou_2020 Kim_Y_2016, Eifan_2017, Grant_2019, UNKNOWN_2015
398 Britton_2020 Basic prediction methodology for covid-19: estimation and sensitivity considerations Tom Britton 2020 2020-03-30 BioRxiv N 10.1101/2020.03.27.20045575 hsgzkpg4 0.338981 Bocharov_2018, Li_C_2018, Lloyd_2009, O'Dea_2010, Zheng_2020 Safi_2011, Bucini_2019, Cotta_2020, Loberg_2020
399 Khosravi_2020 The basic reproduction number and prediction of the epidemic size of the novel coronavirus (COVID-19) in Shahroud, Iran Ahmad Khosravi; Reza Chaman; Marzieh Rohani-Rasaf; Fariba Zare; Shiva Mehravaran; Mohammad Hassan Emamian 2020 2020-04-08 BioRxiv Y 10.1101/2020.04.04.20052308 36fbcobw 0.338725 Muniz-Rodriguez_2020, Choudhury_2011, Abou-Hamdan_2018, Largo_2016, David_2013 Sahafizadeh_2020, Zareie_2020
400 Zhang_2019 A hospital cluster combined with a family cluster of avian influenza H7N9 infection in Anhui Province, China Zhang, Wenyan; Zhao, Kefu; Jin, Jing; He, Jun; Zhou, Wei; Wu, Jinju; Tang, Renshu; Ma, Wenbo; Ding, Caiyu; Liu, Wei; Zhang, Lei; Gao, Rongbao 2019 2019-07-31 PMC N PMC7112695 31100362.0 10.1016/j.jinf.2019.05.008 1o6n2lql 0.338279 Lu_P_2016, Walker_2010, Yasui_2016, Hong-Wu_2015, van_den_Brand_2010 Baier_2018, He_J_2015
401 Wilder-Smith_2006 The severe acute respiratory syndrome: Impact on travel and tourism Wilder-Smith, Annelies 2006 2006-03-31 PMC N PMC7106206 16887725.0 10.1016/j.tmaid.2005.04.004 w826suri 0.338082 Mack_2007, Stenseth_2008, Kruk_2008, Coker_2007, Buseh_2015 Segura_2019, Alp_E_2016, Jiménez-Morillas_2019
402 Cauchemez_2014 Middle East respiratory syndrome coronavirus: quantification of the extent of the epidemic, surveillance biases, and transmissibility Cauchemez, Simon; Fraser, Christophe; Van Kerkhove, Maria D; Donnelly, Christl A; Riley, Steven; Rambaut, Andrew; Enouf, Vincent; van der Werf, Sylvie; Ferguson, Neil M 2014 2014-01-31 None N PMC3895322 24239323.0 10.1016/s1473-3099(13)70304-9 ep98r1de 0.338065 UNKNOWN_2010, Lipsitch_2014, Li_C_2018, Polverino_2017, Murray_2017 Grant_2019, Paden_2017, UNKNOWN_2015
403 Wang_2020 Incidence of novel coronavirus (2019-nCoV) infection among people under home quarantine in Shenzhen, China Wang, Jingzhong; Liao, Yi; Wang, Xiaoyang; Li, Yichong; Jiang, Dan; He, Jianfan; Zhang, Shunxiang; Xia, Junjie 2020 2020-04-02 PMC Y 10.1016/j.tmaid.2020.101660 m3nqa321 0.337901 Griffiths_2010, Fielding_2014, Abdullah_2006, Rusoke-Dierich_2018, Knapp_2008 Zhao_2016, Kui_L_2020, Wang_2020, Guo_L_2012
404 Metcalf_2020 Using serology to anticipate measles post-honeymoon period outbreaks Metcalf, C.J.E.; Wesolowski, A.; Winter, A.K.; Lessler, J.; Cauchemez, S.; Moss, W.J.; McLean, A.R.; Grenfell, B.T. 2020 2020-04-20 PMC N 10.1016/j.tim.2020.04.009 ab1hy5z6 0.337372 Mack_2007, Brucker_2020, Kruk_2008, Stenseth_2008, Cinti_2005
405 Stangeland_2020 How to evaluate the success of the COVID-19 measures implemented by the Norwegian government by analyzing changes in doubling time Biljana Stangeland 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.29.20045187 617bm90s 0.337023 Stenseth_2008, Mack_2007, Coker_2007, Griffiths_2010, Pang_2004 Pike_2020, Pedersen_2020, Klausner_2020, Anderson_2020
406 Vierlboeck_2020 The Easter and Passover Blip in New York City Maximilian Vierlboeck; Roshanak R Nilchiani; Christine M Edwards 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.14.20065300 72v6qufw 0.336134 Mack_2007, Polverino_2017, Li_C_2018, Lauro_2020, Looker_2006
407 Ebenso_2020 Can Nigeria contain the COVID-19 outbreak using lessons from recent epidemics? Ebenso, Bassey; Otu, Akaninyene 2020 2020-03-11 PMC Y 32171055.0 10.1016/s2214-109x(20)30101-7 g4mtpn2p 0.336134 Lim_T_2012, Ma_X_2020, Georgiev_2009, Kim_D_2016, Wang_2014 See_K_2020, Hoy_D_2014
408 Muniz-Rodriguez_2020 Transmission potential of COVID-19 in Iran Kamalich Muniz-Rodriguez; Isaac Chun-Hai Fung; Shayesterh R. Ferdosi; Sylvia K. Ofori; Yiseul Lee; Amna Tariq; Gerardo Chowell 2020 2020-03-10 BioRxiv Y 10.1101/2020.03.08.20030643 uq4eobf0 0.334528 Rossi_2020, Muniz-Rodriguez_2020, Gao_Y_2020, Russell_2020 Shim_2020, Sahafizadeh_2020, He_X_2020, Yong_2016
409 Oxford_2006 Influenza is now a preventable disease Oxford, J.S.; Lambkin, R. 2006 2006-04-30 PMC N PMC7134850 16564681.0 10.1016/j.ijantimicag.2006.02.007 f3pteuxr 0.334379 Lu_P_2016, Walker_2010, Cinti_2005, Mooney_2013, Morens_2010 Zambon_2005, Thompson_2009, Berry_2014, Lachheb_2019
410 Backer_2020 The incubation period of 2019-nCoV infections among travellers from Wuhan, China Jantien A. Backer; Don Klinkenberg; Jacco Wallinga 2020 2020-01-28 BioRxiv Y 10.1101/2020.01.27.20018986 u8goc7io 0.334379 Muniz-Rodriguez_2020, Choi_2017, Backer_2020, Rossi_2020 Xia_W_2020, Backer_2020, Park_2007, Ping_2020
411 Wang_2004 Simulating the SARS outbreak in Beijing with limited data Wang, Wendi; Ruan, Shigui 2004 2004-04-07 PMC N PMC7134597 15019504.0 10.1016/j.jtbi.2003.11.014 eb8ysg2b 0.334169 Griette_2020, Bifolchi_2013, Chang_2011, Renna_2020 Gumel_2004, Zhang_2005, Zhang_2007, Chowell_2003
412 Nishiura_2020 Initial Cluster of Novel Coronavirus (2019-nCoV) Infections in Wuhan, China Is Consistent with Substantial Human-to-Human Transmission Nishiura, Hiroshi; Linton, Natalie M.; Akhmetzhanov, Andrei R. 2020 2020-01-01 COMM-USE Y PMC7073724 32054045.0 10.3390/jcm9020488 z9dolxky 0.334030 Stenseth_2008, Mack_2007, Brucker_2020, UNKNOWN_2010, Cinti_2005 Nemoto_2014, Lachheb_2019, Chua_2011, Zhao_2007
413 Nishiura_2010 Assortativity and the Probability of Epidemic Extinction: A Case Study of Pandemic Influenza A (H1N1-2009) Nishiura, Hiroshi; Cook, Alex R.; Cowling, Benjamin J. 2010 2010-12-23 COMM-USE N PMC3017939 21234337.0 10.1155/2011/194507 fzilbgjy 0.333840 Li_C_2018, Fauci_2006, Wu_Q_2014, Swift_2007, Holmes_2007 Safi_2011, Kretzschmar_2020, Kucharski_2015, Lam_T_2008
414 Cai_Q_2006 Refined Estimate of the Incubation Period of Severe Acute Respiratory Syndrome and Related Influencing Factors Cai, Quan-Cai; Xu, Qin-Feng; Xu, Jian-Ming; Guo, Qiang; Cheng, Xiang; Zhao, Gen-Ming; Sun, Qing-Wen; Lu, Jian; Jiang, Qing-Wu 2006 2006-02-01 PMC N PMC7109871 16339050.0 10.1093/aje/kwj034 4h9j9bw2 0.333741 Pearson_2020, batista_2020, Li_C_2018, Scheuerl_2020 Nishiura_2007, ZENG_2009, Virlogeux_2015
415 Wang_2020 Household Transmission of SARS-CoV-2 Wang, Zhongliang; Ma, Wanli; Zheng, Xin; Wu, Gang; Zhang, Ruiguang 2020 2020-04-10 PMC Y 10.1016/j.jinf.2020.03.040 s0zac04y 0.333681 Win_K_2011, Navascués_2018, Yu_H_2007, Pang_2011 Xing_2020, Munywoki_2015, Xu_D_2005
416 Duerr_2007 Influenza pandemic intervention planning using InfluSim: pharmaceutical and non- pharmaceutical interventions Duerr, Hans P; Brockmann, Stefan O; Piechotowski, Isolde; Schwehm, Markus; Eichner, Martin 2007 2007-07-13 COMM-USE N PMC1939851 17629919.0 10.1186/1471-2334-7-76 2ks9iimj 0.333668 Coker_2007, Mack_2007, Mwabu_2008, Stenseth_2008, Amirov_2007 Hollingsworth_2011, Eichner_2007, Oshitani_2006
417 Wang_2020 Evolving Epidemiology and Impact of Non-pharmaceutical Interventions on the Outbreak of Coronavirus Disease 2019 in Wuhan, China Chaolong Wang; Li Liu; Xingjie Hao; Huan Guo; Qi Wang; Jiao Huang; Na He; Hongjie Yu; Xihong Lin; An Pan; Sheng Wei; Tangchun Wu 2020 2020-03-06 BioRxiv Y 10.1101/2020.03.03.20030593 944pn0k9 0.331865 Majumder_2015, Lim_T_2012, Win_K_2011, Pearson_2020, Azziz-Baumgartner_2012 Xia_W_2020, Yan_S_2020, Zhang_2020, Wu_J_2020
418 Massad_2005 Forecasting versus projection models in epidemiology: The case of the SARS epidemics Massad, Eduardo; Burattini, Marcelo N.; Lopez, Luis F.; Coutinho, Francisco A.B. 2005 2005-12-31 PMC N PMC7116954 15893110.0 10.1016/j.mehy.2004.09.029 l0c69uul 0.331102 Griffiths_2010, Li_C_2018, batista_2020, Stenseth_2008, Polverino_2017 Safi_2011, Park_2017, Gumel_2004, Colizza_2007
419 Tan_Y_2004 Management of inpatients exposed to an outbreak of severe acute respiratory syndrome (SARS) Tan, Y.-M.; Chow, P.K.H.; Tan, B.-H.; Kurup, A.; Tan, B.K.T.; Tan, F.L.S.; Seldrup, J.; Heng, D.M.K.; Ang, B.; Green, J.; Wong, C.-Y.; Soo, K.-C. 2004 2004-11-30 PMC N PMC7124218 15501336.0 10.1016/j.jhin.2004.06.013 wf5p0ecl 0.330932 Deng_2015, Laurens_2019, Atkinson_2020, Choi_2011, Walker_2010 Leung_2004, Ciccozzi_2018, Tham_2004
420 Chowell_2020 Getting to zero quickly in the 2019-nCov epidemic with vaccines or rapid testing Gerardo Chowell; Ranu Dhillon; Devabhaktuni Srikrishna 2020 2020-02-05 BioRxiv Y 10.1101/2020.02.03.20020271 4sw1hrnf 0.330932 Heymann_2005, Pearson_2020, Lauro_2020, Chen_2018 Wu_J_2016, Wu_J_2016, Djidjou-Demasse_2020, Tang_2020
421 Fauver_2020 Coast-to-coast spread of SARS-CoV-2 in the United States revealed by genomic epidemiology Joseph R Fauver; Mary E. Petrone; Emma B Hodcroft; Kayoko Shioda; Hanna Y Ehrlich; Alexander G. Watts; Chantal B.F. Vogels; Anderson F. Brito; Tara Alpert; Anthony Muyombwe; Jafar Razeq; Randy Downing; Nagarjuna R. Cheemarla; Anne L Wyllie; Chaney C. Kalinich; Isabel Ott; Josh Quick; Nicholas J. Loman; Karla M. Neugebauer; Alexander L. Greninger; Keith R. Jerome; Pavitra Roychoundhury; Hong Xie; Lasata Shrestha; Meei-Li Huang; Virginia E. Pitzer; Akiko Iwasaki; Saad B. Omer; Kamran Khan; Isaac Bogoch; Richard A. Martinello; Ellen F. Foxman; Marie-Louise Landry; Richard A Neher; Albert I Ko; Nathan D. Grubaugh 2020 2020-03-26 BioRxiv Y 10.1101/2020.03.25.20043828 8m06zdho 0.330660 Lim_T_2012, Wang_2014, Buseh_2015, Eden_2020, Eden_2020 Deng_2020, Boni_2020, Luk_H_2019, Rockx_2020
422 Bruinen_de_Bruin_2020 Initial impacts of global risk mitigation measures taken during the combatting of the COVID-19 pandemic Bruinen de Bruin, Yuri; Lequarre, Anne-Sophie; McCourt, Josephine; Clevestig, Peter; Pigazzani, Filippo; Zare Jeddi, Maryam; Colosio, Claudio; Goulart, Margarida 2020 2020-04-15 PMC Y 10.1016/j.ssci.2020.104773 urkuofmu 0.330582 Coker_2007, Griffiths_2010, Wei_B_2011, Mack_2007, Stenseth_2008 Anderson_2020, Kim_I_2020, Gilbert_2020, Yuan_2020
423 Leavitt_2019 Estimating the Relative Probability of Direct Transmission between Infectious Disease Patients Sarah V Leavitt; Robyn S Lee; Paola Sebastiani; Charles R. Horsburgh; Helen E Jenkins; Laura F White 2019 2019-04-26 BioRxiv N 10.1101/612945 xhffsa77 0.330424 Chang_2011, Bifolchi_2013, Welch_2011, O'Dea_2010, Polverino_2017 Robert_2020, Safi_2011, Thompson_2019
424 Zhao_2020 A Social Network Model of the COVID-19 Pandemic Pei Jun Zhao 2020 2020-03-27 BioRxiv Y 10.1101/2020.03.23.20041798 ogqsi3ns 0.330318 Mack_2007, Li_C_2018, Wu_Q_2014, Lu_J_2020 Milne_2020, Hilton_2020, Zhang_2020
425 Breban_2013 Interhuman transmissibility of Middle East respiratory syndrome coronavirus: estimation of pandemic risk Breban, Romulus; Riou, Julien; Fontanet, Arnaud 2013 2013-08-30 None N PMC7159280 23831141.0 10.1016/s0140-6736(13)61492-0 n2abv3ub 0.330249 Walker_2010, UNKNOWN_2010, Lu_P_2016, Wiwanitkit_2014, Lipsitch_2014 Omrani_2015, Rockx_2020, MacIntyre_2014
426 Zumla_2016 What is the experience from previous mass gathering events? Lessons for Zika virus and the Olympics 2016 Zumla, A.; McCloskey, B.; Bin Saeed, A.A.; Dar, O.; Al Otabi, B.; Perlmann, S.; Gautret, P.; Roy, N.; Blumberg, L.; Azhar, E.I.; Barbeschi, M.; Memish, Z.; Petersen, E. 2016 2016-06-30 PMC N PMC7110488 27321962.0 10.1016/j.ijid.2016.06.010 q0vqlerz 0.328685 Mack_2007, UNKNOWN_2010, Cinti_2005, Lu_P_2016, Stenseth_2008 Chin_2019, Turner_2010
427 Tang_2020 The effectiveness of quarantine and isolation determine the trend of the COVID-19 epidemics in the final phase of the current outbreak in China Tang, Biao; Xia, Fan; Tang, Sanyi; Bragazzi, Nicola Luigi; Li, Qian; Sun, Xiaodan; Liang, Juhua; Xiao, Yanni; Wu, Jianhong 2020 2020-04-17 PMC Y 10.1016/j.ijid.2020.03.018 gdsh8wmv 0.328277 Stenseth_2008, Guery_2014, Mack_2007, Pai_M_2006, Buseh_2015 Yuan_2020
428 Wilson_2020 Modelling the Potential Health Impact of the COVID-19 Pandemic on a Hypothetical European Country Nick Wilson; Lucy Telfar Barnard; Amanda Kvalsig; Ayesha Verrall; Michael G Baker; Markus Schwehm 2020 2020-03-23 BioRxiv Y 10.1101/2020.03.20.20039776 rxv5lgq8 0.327879 Pearson_2020, Win_K_2011, Muniz-Rodriguez_2020, Russell_2020 Pais_2020, Tuite_2020, Esteban_2020, Johnson_2020
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430 Agoti_2017 Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis Agoti, Charles N.; Munywoki, Patrick K.; Phan, My V. T.; Otieno, James R.; Kamau, Everlyn; Bett, Anne; Kombe, Ivy; Githinji, George; Medley, Graham F.; Cane, Patricia A.; Kellam, Paul; Cotten, Matthew; Nokes, D. James 2017 2017-03-11 COMM-USE N PMC5399923 28458916.0 10.1093/ve/vex006 aq3ho77b 0.327250 Lu_P_2016, Puranaveja_2009, Lam_T_2008, Karlsson_2012, Chieochansin_2010 Agoti_2019, Chu_H_2013, Baier_2018
431 Luca_2017 The impact of regular school closure on seasonal influenza epidemics: a data-driven spatial transmission model for Belgium Giancarlo De Luca; Kim Van Kerckhove; Pietro Coletti; Chiara Poletto; Nathalie Bossuyt; Niel Hens; Vittoria Colizza 2017 2017-12-07 BioRxiv N 10.1101/230565 xpbgpsp8 0.327242 Mack_2007, Stenseth_2008, Coker_2007, Zhou_2020, UNKNOWN_2019 Luca_2018, Liu_F_2014, Chowell_2012
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433 Sarkar_2012 Horizontal transmission of novel H1N1/09 influenza virus in a newborn: Myth or fact? Sarkar, Uttam Kumar; Mitra, Utpala; Sarkar, Mamta Chawla; Dutta, Shanta; Roy, Himanish; Chatterjee, Mrinal Kanti; Dutta, Phalguni 2012 2012-12-31 PMC N PMC7147896 10.1016/s2221-6189(13)60042-6 cpy0bscx 0.326736 Lu_P_2016, Walker_2010, Brucker_2020, Deng_2015 Sáez-López_2019, Lachheb_2019, Baier_2018, Van_Hoeven_2009
434 Chen_2007 Incorporating Geographical Contacts into Social Network Analysis for Contact Tracing in Epidemiology: A Study on Taiwan SARS Data Chen, Yi-Da; Tseng, Chunju; King, Chwan-Chuen; Wu, Tsung-Shu Joseph; Chen, Hsinchun 2007 2007-01-01 PMC N PMC7122638 10.1007/978-3-540-72608-1_3 og0b2l6b 0.326734 Pacheco_2017, Li_C_2018, Welch_2011, Zhou_2020, Krause_2007 Yang_2020, Chen_2010, Stein_2014, Stein_2015
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436 Lo_J_2005 Respiratory Infections during SARS Outbreak, Hong Kong, 2003 Lo, Janice Y.C.; Tsang, Thomas H.F.; Leung, Yiu-Hong; Yeung, Eugene Y.H.; Wu, Thomson; Lim, Wilina W.L. 2005 2005-11-23 PMC N PMC3367357 16318726.0 10.3201/eid1111.050729 u8cbx4q5 0.325664 Deng_2015, Walker_2010, Brucker_2020, Kim_D_2016 Ha_L_2004, Moon_2017, Singh_2003, Yavarian_2015
437 Vogt_2006 Risk of Severe Acute Respiratory Syndrome–Associated Coronavirus Transmission Aboard Commercial Aircraft Vogt, Tara M.; Guerra, Marta A.; Flagg, Elaine W.; Ksiazek, Thomas G.; Lowther, Sara A.; Arguin, Paul M. 2006 2006-09-20 PMC N PMC7109856 16987125.0 10.1111/j.1708-8305.2006.00048.x 4qkh3quk 0.325413 Choi_2011, Yu_H_2007, Kaydos-Daniels_2004, Azziz-Baumgartner_2012, Navascués_2018 Aleanizy_2017, Xu_D_2005, Wang_2020, Khan_2020
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441 Cowling_2008 Effects of School Closures, 2008 Winter Influenza Season, Hong Kong Cowling, Benjamin J.; Lau, Eric H.Y.; Lam, Conrad L.H.; Cheng, Calvin K.Y.; Kovar, Jana; Chan, Kwok Hung; Peiris, J.S. Malik; Leung, Gabriel M. 2008 2008-10-23 PMC N PMC2609897 18826841.0 10.3201/eid1410.080646 tn12qqg9 0.324986 Lekana-Douki_2013, Azman_2016, Yu_H_2007, Amonsin_2008 Turner_2010, Azman_2016, Chu_Y_2017, Chin_2019
442 Luca_2018 The impact of regular school closure on seasonal influenza epidemics: a data-driven spatial transmission model for Belgium Luca, Giancarlo De; Kerckhove, Kim Van; Coletti, Pietro; Poletto, Chiara; Bossuyt, Nathalie; Hens, Niel; Colizza, Vittoria 2018 2018-01-10 COMM-USE N PMC5764028 29321005.0 10.1186/s12879-017-2934-3 5xrww1se 0.324299 Mack_2007, Coker_2007, Stenseth_2008, Griffiths_2010, UNKNOWN_2010 Luca_2017, Liu_F_2014, Chowell_2012
443 Reuss_2014 Contact Investigation for Imported Case of Middle East Respiratory Syndrome, Germany Reuss, Annicka; Litterst, Annette; Drosten, Christian; Seilmaier, Michael; Böhmer, Merle; Graf, Petra; Gold, Hermann; Wendtner, Clemens-Martin; Zanuzdana, Arina; Schaade, Lars; Haas, Walter; Buchholz, Udo 2014 2014-04-23 PMC N PMC3966395 24655721.0 10.3201/eid2004.131375 arjtjy53 0.324014 Kim_D_2016, Deng_2015, Yavarian_2015, Durigon_2010, Navascués_2018 Aleanizy_2017, Racelis_2015
444 Rosello_2015 Ebola virus disease in the Democratic Republic of the Congo, 1976-2014 Rosello, Alicia; Mossoko, Mathias; Flasche, Stefan; Van Hoek, Albert Jan; Mbala, Placide; Camacho, Anton; Funk, Sebastian; Kucharski, Adam; Ilunga, Benoit Kebela; Edmunds, W John; Piot, Peter; Baguelin, Marc; Muyembe Tamfum, Jean-Jacques 2015 2015-11-03 COMM-USE N PMC4629279 26525597.0 10.7554/elife.09015 vqoxd64i 0.323112 Pearson_2020, Scheuerl_2020, Win_K_2011, Mondor_2012, Wu_Z_2013 Ceylan_2013, Sikakulya_2019, Halpin_2014
445 Liu_H_2020 Synchronized travel restrictions across cities can be effective in COVID-19 control Haiyan Liu; Xuemei Bai; Huanfeng Shen; Xiaoping Pang; Zeyu Liang; Yue Liu 2020 2020-04-06 BioRxiv Y 10.1101/2020.04.02.20050781 jxj10857 0.323091 Li_C_2018, Griffiths_2010, Fielding_2014, Galea_2005, Jin_G_2020 Kraemer_2020, dos_Santos_2018, Zhang_2019, Ribeiro_2020
446 Wu_J_2020 Nowcasting and forecasting the potential domestic and international spread of the 2019-nCoV outbreak originating in Wuhan, China: a modelling study Wu, Joseph T; Leung, Kathy; Leung, Gabriel M 2020 2020-03-06 PMC Y PMC7159271 32014114.0 10.1016/s0140-6736(20)30260-9 32v44sw9 0.322237 Lim_T_2012, Rodier_2007, Ma_X_2020, Georgiev_2009, Lin_Q_2020 Ji_X_2020, Lin_B_2020, He_J_2020, Wang_2020
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451 Pullano_2020 Novel coronavirus (2019-nCoV) early-stage importation risk to Europe, January 2020 Pullano, Giulia; Pinotti, Francesco; Valdano, Eugenio; Boëlle, Pierre-Yves; Poletto, Chiara; Colizza, Vittoria 2020 2020-01-30 COMM-USE Y PMC7001240 32019667.0 10.2807/1560-7917.es.2020.25.4.2000057 332ey2v1 0.320985 Lim_T_2012, Georgiev_2009, Kim_D_2016, Wang_2014 Bassetti_2020, Zhu_N_2020, Cheng_2020, Miszczak_2014
452 Cowling_2008 Preliminary Findings of a Randomized Trial of Non-Pharmaceutical Interventions to Prevent Influenza Transmission in Households Cowling, Benjamin J.; Fung, Rita O. P.; Cheng, Calvin K. Y.; Fang, Vicky J.; Chan, Kwok Hung; Seto, Wing Hong; Yung, Raymond; Chiu, Billy; Lee, Paco; Uyeki, Timothy M.; Houck, Peter M.; Peiris, J. S. Malik; Leung, Gabriel M. 2008 2008-05-07 None N PMC2364646 18461182.0 10.1371/journal.pone.0002101 543aq9dx 0.319480 Choi_2011, To_K_2010, Atkinson_2020, Mondor_2012, Knapp_2008 Munywoki_2015
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454 Dan_Y_2009 Cost-effectiveness Analysis of Hospital Infection Control Response to an Epidemic Respiratory Virus Threat Dan, Yock Young; Tambyah, Paul A.; Sim, Joe; Lim, Jeremy; Hsu, Li Yang; Chow, Wai Leng; Fisher, Dale A.; Wong, Yue Sie; Ho, Khek Yu 2009 2009-12-23 PMC N PMC3044543 19961669.0 10.3201/eid1512.090902 vl5t4ztc 0.319019 Walker_2010, Lu_P_2016, Brucker_2020, Cinti_2005, Paranthaman_2008 Zambon_2005, Kumar_2017, Gumel_2004, Cillóniz_2012
455 McMichael_2020 Epidemiology of Covid-19 in a Long-Term Care Facility in King County, Washington McMichael, Temet M.; Currie, Dustin W.; Clark, Shauna; Pogosjans, Sargis; Kay, Meagan; Schwartz, Noah G.; Lewis, James; Baer, Atar; Kawakami, Vance; Lukoff, Margaret D.; Ferro, Jessica; Brostrom-Smith, Claire; Rea, Thomas D.; Sayre, Michael R.; Riedo, Francis X.; Russell, Denny; Hiatt, Brian; Montgomery, Patricia; Rao, Agam K.; Chow, Eric J.; Tobolowsky, Farrell; Hughes, Michael J.; Bardossy, Ana C.; Oakley, Lisa P.; Jacobs, Jesica R.; Stone, Nimalie D.; Reddy, Sujan C.; Jernigan, John A.; Honein, Margaret A.; Clark, Thomas A.; Duchin, Jeffrey S. 2020 2020-03-27 None Y PMC7121761 32220208.0 10.1056/nejmoa2005412 ajqbljai 0.318710 Laurens_2019, Griffiths_2010, Rodier_2007, Deng_2015, Atkinson_2020 Balkhy_2016, Turcios-Ruiz_2008
456 Wembri_2008 Severe Infections in the Returning Traveler Wembri, Jacob P.; Schmid, Matthias L. 2008 2008-01-01 PMC N PMC7122235 10.1007/978-1-84628-939-2_9 59gzz4ke 0.318270 Brucker_2020, Mack_2007, Atkinson_2020, Kreiss_2007 Kotlyar_2013, Marks_2020, Trimble_2017, Korzeniewski_2014
457 Brynildsrud_2020 High COVID-19 incidence among Norwegian travellers returned from Lombardy: implications for travel restrictions Ola Brynildsrud; Vegard Eldholm 2020 2020-03-23 BioRxiv Y 10.1101/2020.03.20.20038406 3wegrnyn 0.317850 Lim_T_2012, Pirie_2006, Kim_D_2016, Lee_V_2007, Soliman_2015 Tuite_2020, Yuan_2020, Crameri_2015, Erdem_2016
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462 Yap_W_2020 Time-variant strategies for optimizing the performance of non-pharmaceutical interventions (NPIs) in protecting lives and livelihoods during the COVID-19 pandemic Wei Aun Yap; Dhesi Baha Raja 2020 2020-04-17 BioRxiv N 10.1101/2020.04.13.20063248 180x1fvb 0.316305 Polverino_2017, van_Helden_2013, Monga_2006, Mack_2007, Zhou_2020
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464 Li_R_2020 Substantial undocumented infection facilitates the rapid dissemination of novel coronavirus (SARS-CoV2) Li, Ruiyun; Pei, Sen; Chen, Bin; Song, Yimeng; Zhang, Tao; Yang, Wan; Shaman, Jeffrey 2020 2020-03-16 None Y PMC7164387 32179701.0 10.1126/science.abb3221 xchvlphf 0.315156 Brucker_2020, Pai_M_2006, Fauci_2006, Berrada_2009, Li_C_2018 Li_R_2020, Rockx_2020, Rockx_2011, Rabaa_2015
465 Pourbohloul_2005 Modeling Control Strategies of Respiratory Pathogens Pourbohloul, Babak; Meyers, Lauren Ancel; Skowronski, Danuta M.; Krajden, Mel; Patrick, David M.; Brunham, Robert C. 2005 2005-08-23 PMC N PMC3320482 16102315.0 10.3201/eid1108.040449 qun1kyvw 0.314521 Brucker_2020, Weiss_2003, Mack_2007, Fauci_2006, Lu_P_2016 Rabaa_2015, Bing-Yuan_2018, Popescu_2019, Baier_2018
466 Khailaie_2020 Estimate of the development of the epidemic reproduction number Rt from Coronavirus SARS-CoV-2 case data and implications for political measures based on prognostics Sahamoddin Khailaie; Tanmay Mitra; Arnab Bandyopadhyay; Marta Schips; Pietro Mascheroni; Patrizio Vanella; Berit Lange; Sebastian Binder; Michael Meyer-Hermann 2020 2020-04-07 BioRxiv Y 10.1101/2020.04.04.20053637 0uzma5vr 0.314415 Mack_2007, Polverino_2017, Stenseth_2008, Coker_2007, van_Helden_2013 Devaux_2020, Sims_2008, Rockx_2020
467 Gupta_2005 The economic impact of quarantine: SARS in Toronto as a case study Gupta, Anu G.; Moyer, Cheryl A.; Stern, David T. 2005 2005-06-30 PMC N PMC7112515 15907545.0 10.1016/j.jinf.2004.08.006 kp7qk49p 0.314204 Mack_2007, Coker_2007, Atkinson_2020, Kruk_2008, Stenseth_2008 Ceylan_2013, Hsieh_2007, Rabaa_2015, Ciccozzi_2018
468 Firestone_2012 Adding the spatial dimension to the social network analysis of an epidemic: Investigation of the 2007 outbreak of equine influenza in Australia Firestone, Simon M.; Christley, Robert M.; Ward, Michael P.; Dhand, Navneet K. 2012 2012-09-15 PMC N PMC7126086 22365721.0 10.1016/j.prevetmed.2012.01.020 xftxcgeu 0.314047 Li_C_2018, Welch_2011, Zhang_2019, Pacheco_2017, Wu_Q_2014 dos_Santos_2018, Yang_2020, Chen_2007, Milne_2020
469 Wallinga_2004 Different Epidemic Curves for Severe Acute Respiratory Syndrome Reveal Similar Impacts of Control Measures Wallinga, Jacco; Teunis, Peter 2004 2004-09-15 PMC N PMC7110200 15353409.0 10.1093/aje/kwh255 rl6yum7n 0.313973 Mondor_2012, Cinti_2005, Li_C_2018, Chen_2018, Wu_Q_2014 Gumel_2004, Glennon_2020, Kim_Y_2016, Ng_T_2003
470 Nishiura_2020 The Rate of Underascertainment of Novel Coronavirus (2019-nCoV) Infection: Estimation Using Japanese Passengers Data on Evacuation Flights Nishiura, Hiroshi; Kobayashi, Tetsuro; Yang, Yichi; Hayashi, Katsuma; Miyama, Takeshi; Kinoshita, Ryo; Linton, Natalie M.; Jung, Sung-Mok; Yuan, Baoyin; Suzuki, Ayako; Akhmetzhanov, Andrei R. 2020 2020-01-01 COMM-USE Y PMC7074297 32033064.0 10.3390/jcm9020419 1rcsqyff 0.313841 Choi_2017, Win_K_2011, Muniz-Rodriguez_2020, Li_W_2012, Azziz-Baumgartner_2012 Park_2015, Fry_A_2007
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472 Salomon_2020 Defining high-value information for COVID-19 decision-making Joshua A Salomon 2020 2020-04-08 BioRxiv Y 10.1101/2020.04.06.20052506 iymhykq8 0.313109 Coker_2007, Mooney_2013, Stenseth_2008, Mack_2007, Ropeik_2004 Nicolau_2020, Tuite_2020, Einian_2020, Moss_2020
473 Barnett_2005 Prevention of Travel-Related Infectious Diseases in Families of Internationally Adopted Children Barnett, Elizabeth D.; Chen, Lin H. 2005 2005-10-31 PMC N PMC7118974 16154463.0 10.1016/j.pcl.2005.06.002 jsyz05e6 0.312320 Coker_2007, Amirov_2007, Rusoke-Dierich_2018, Atkinson_2020, Ibrahim_2018 Shetty_2019, Maloney_2004, Beeching_2005, Korzeniewski_2014
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475 Sun_H_2020 Estimating number of global importations of COVID-19 from Wuhan, risk of transmission outside mainland China and COVID-19 introduction index between countries outside mainland China Haoyang Sun; Borame Lee Dickens; Mark Chen; Alex Richard Cook; Hannah Eleanor Clapham 2020 2020-02-20 BioRxiv Y 10.1101/2020.02.17.20024075 2w3bx6p8 0.311668 Lim_T_2012, Wang_2014, Kim_D_2016, Pirie_2006 He_J_2020, Zhuang_2020, Yuan_2020
476 Otomaru_2019 Transmission of Respiratory Syncytial Virus Among Children Under 5 Years in Households of Rural Communities, the Philippines Otomaru, Hirono; Kamigaki, Taro; Tamaki, Raita; Okamoto, Michiko; Alday, Portia Parian; Tan, Alvin Gue; Manalo, Joanna Ina; Segubre-Mercado, Edelwisa; Inobaya, Marianette Tawat; Tallo, Veronica; Lupisan, Socorro; Oshitani, Hitoshi 2019 2019-03-11 NONCOMM N PMC6411217 30882012.0 10.1093/ofid/ofz045 0jfvik7w 0.311668 Azziz-Baumgartner_2012, Pearson_2020, Murray_2015, Choi_2011, Win_K_2011 Chu_H_2013, Munywoki_2015, Gamiño‐Arroyo_2016, Agoti_2019
477 Armbruster_2007 Contact tracing to control infectious disease: when enough is enough Armbruster, Benjamin; Brandeau, Margaret L. 2007 2007-10-03 PMC N PMC3428220 18074967.0 10.1007/s10729-007-9027-6 r3tmfweq 0.311471 Polverino_2017, Looker_2006, Mwabu_2008, Mack_2007 House_2010, Porco_2004, Kretzschmar_2020, Klinkenberg_2006
478 Handel_2006 What is the best control strategy for multiple infectious disease outbreaks? Handel, Andreas; Longini, Ira M; Antia, Rustom 2006 2006-12-19 PMC N PMC2093965 17251095.0 10.1098/rspb.2006.0015 jh3lb6po 0.311183 Mack_2007, Coker_2007, Stenseth_2008, Kruk_2008 Popescu_2019, Rabaa_2015, Glennon_2020
479 Lan_F_2020 Work-related Covid-19 transmission Fan-Yun Lan; Chih-Fu Wei; Yu-Tien Hsu; David C Christiani; Stefanos N Kales 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.08.20058297 0ygaj2hm 0.310915 Atkinson_2020, Griffiths_2010, Fielding_2014, Amirov_2007, Wei_B_2011 Balkhy_2016, Aleanizy_2017, Wang_2020
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481 Sansone_2019 Molecular characterization of a nosocomial outbreak of influenza B virus in an acute care hospital setting Sansone, M.; Wiman, Å.; Karlberg, M.L.; Brytting, M.; Bohlin, L.; Andersson, L-M.; Westin, J.; Nordén, R. 2019 2019-01-31 PMC N PMC7114871 29909095.0 10.1016/j.jhin.2018.06.004 mi3ngq6g 0.309812 Walker_2010, Mondor_2012, UNKNOWN_2010, Amirov_2007, Karlsson_2012 Baier_2018, Chu_H_2014, Gamiño‐Arroyo_2016
482 Song_2020 A considerable proportion of individuals with asymptomatic SARS-CoV-2 infection in Tibetan population Huan Song; Jun Xiao; Jiajun Qiu; Jin Yin; Huazhen Yang; Rui Shi; Wei Zhang 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.27.20043836 bmsmegbs 0.309778 Win_K_2011, Vui_D_2014, Li_W_2012, Puranaveja_2009, Yu_H_2007 Xu_D_2005, Marchese-Ragona_2020, Lei_Y_2020, Xing_2020
483 Ping_2020 Epidemiologic Characteristics of COVID-19 in Guizhou, China Kaike Ping 2020 2020-03-06 BioRxiv Y 10.1101/2020.03.01.20028944 tne83uu0 0.309026 Lim_T_2012, Tomie_2020, Lin_Q_2020, Kim_D_2016, Vui_D_2014 Wu_J_2020, Tian_2020, Xia_W_2020, He_J_2020
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485 Shuler_2020 Partial unlock caseload management for COVID-19 can save 1-2 million lives worldwide Robert L Shuler; Theodore Koukouvitis 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.13.20064139 wkxuup8k 0.307170 Mack_2007, Coker_2007, Stenseth_2008, Looker_2006, van_Helden_2013
486 Donnelly_2019 Worldwide Reduction in MERS Cases and Deaths since 2016 Donnelly, Christl A.; Malik, Mamun R.; Elkholy, Amgad; Cauchemez, Simon; Van Kerkhove, Maria D. 2019 2019-09-23 None N PMC6711233 31264567.0 10.3201/eid2509.190143 ks4y5dur 0.306897 Brucker_2020, Wang_2014, Buseh_2015, Lu_P_2016, Mack_2007 Abroug_2014, Liljander_2016, Aleanizy_2017
487 Mohr_2013 Development of a risk assessment tool for contact tracing people after contact with infectious patients while travelling by bus or other public ground transport: a Delphi consensus approach Mohr, Oliver; Hermes, Julia; Schink, Susanne B; Askar, Mona; Menucci, Daniel; Swaan, Corien; Goetsch, Udo; Monk, Philip; Eckmanns, Tim; Poggensee, Gabriele; Krause, Gérard 2013 2013-10-24 None N PMC3808761 24157815.0 10.1136/bmjopen-2013-002939 99bhj7ft 0.306330 Coker_2007, Polverino_2017, Rusoke-Dierich_2018, Stenseth_2008, Knapp_2008 Hellmich_2017, Chen_2007, Enanoria_2016, Racelis_2015
488 Li_R_2004 Severe Acute Respiratory Syndrome (SARS) and the GDP. Part I: Epidemiology, virology, pathology and general health issues Li, R W K; Leung, K W C; Sun, F C S; Samaranayake, L P 2004 2004-07-24 PMC N PMC7091565 15272339.0 10.1038/sj.bdj.4811469 s9qvrkia 0.306184 Brucker_2020, Lu_P_2016, Atkinson_2020, Mack_2007, Walker_2010 Li_C_2009, Khan_2020
489 Jing_2020 Estimation of incubation period distribution of COVID-19 using disease onset forward time: a novel cross-sectional and forward follow-up study Qin Jing; Chong You; Qiushi Lin; Taojun Hu; Shicheng Yu; Xiao-Hua Zhou 2020 2020-03-10 BioRxiv Y 10.1101/2020.03.06.20032417 it4ka7v0 0.305823 Polverino_2017, batista_2020, Kenah_2012, Pearson_2020, Li_C_2018 Linton_2020, Xia_W_2020, Nishiura_2007, Linton_2020
490 Gold_2019 Health screening strategies for international air travelers during an epidemic or pandemic Gold, Lukas; Balal, Esmaeil; Horak, Tomas; Cheu, Ruey Long; Mehmetoglu, Tugba; Gurbuz, Okan 2019 2019-03-31 PMC N PMC7147844 10.1016/j.jairtraman.2018.11.006 nppps1dh 0.305221 Fielding_2014, Griffiths_2010, Buseh_2015, Kruk_2008, Mack_2007 Kuan_2012, Segura_2019, Clifford_2020, Martin_2018
491 Leung_2020 A Territory-wide study of COVID-19 cases and clusters with unknown source in Hong Kong community: A clinical, epidemiological and phylogenomic investigation Kenneth Siu-Sing Leung; Timothy Ting-Leung Ng; Alan Ka-Lun Wu; Miranda Chong-Yee Yau; Hiu-Yin Lao; Ming-Pan Choi; Kingsley King-Gee Tam; Lam-Kwong Lee; Barry Kin-Chung Wong; Alex Yat-Man Ho; Kam-Tong Yip; Kwok-Cheung Lung; Raymond Wai-To Liu; Eugene Yuk-Keung Tso; Wai-Shing Leung; Man-Chun Chan; Yuk-Yung Ng; Kit-Man Sin; Kitty Sau-Chun Fung; Sandy Ka-Yee Chau; Wing-Kin To; Tak-Lun Que; David Ho-Keung Shum; Shea Ping Yip; Wing-Cheong Yam; Gilman Kit Hang Siu 2020 2020-03-31 BioRxiv Y 10.1101/2020.03.30.20045740 uz91cd6h 0.305205 Kim_D_2016, Lim_T_2012, Vui_D_2014, Lee_S_2014, Puranaveja_2009 El-Kafrawy_2019, Cotten_2013, Memish_2014
492 ZENG_2009 Infectivity of Severe Acute Respiratory Syndrome during Its Incubation Period ZENG, Guang; XIE, Shu-Yun; LI, Qin; OU, Jian-Ming 2009 2009-12-31 PMC N PMC7135585 20337224.0 10.1016/s0895-3988(10)60008-6 0dowtdyw 0.305172 Choi_2011, Yu_H_2007, Navascués_2018, Li_W_2012, Zhang_2020 Xu_D_2005
493 Dandekar_2020 Quantifying the effect of quarantine control in Covid-19 infectious spread using machine learning Raj Dandekar; George Barbastathis 2020 2020-04-06 BioRxiv Y 10.1101/2020.04.03.20052084 222c1jzv 0.304609 Griffiths_2010, Stenseth_2008, UNKNOWN_2010, Buseh_2015, Zhou_2020 Yuan_2020, Rabaa_2015, Mock_2019, Wu_H_2016
494 Lopez_2020 A modified SEIR model to predict the COVID-19 outbreak in Spain: simulating control scenarios and multi-scale epidemics Leonardo R Lopez; Xavier Rodo 2020 2020-03-30 BioRxiv Y 10.1101/2020.03.27.20045005 m27nyzrw 0.303780 Li_C_2018, Wu_Q_2014, Chen_2018, Mondor_2012, Mack_2007 Yuan_2020, Filho_2020
495 Mills_2004 Transmissibility of 1918 pandemic influenza Mills, Christina E.; Robins, James M.; Lipsitch, Marc 2004 2004-01-01 PMC N PMC7095078 15602562.0 10.1038/nature03063 hcrc95bk 0.303673 Walker_2010, Lu_P_2016, Cinti_2005, UNKNOWN_2010, Morens_2010 Zambon_2005, Singh_2010, Wong_2006, Van_Hoeven_2009
496 Gjini_2020 Modeling Covid-19 dynamics for real-time estimates and projections: an application to Albanian data Erida Gjini 2020 2020-03-23 BioRxiv Y 10.1101/2020.03.20.20038141 ela022bo 0.303536 Bocharov_2018, Li_C_2018, Zhou_2020, Stenseth_2008, Chowell_2017 Smeets_2020, Ghaffarzadegan_2020, Tuite_2020
497 Kuan_2012 Airport sentinel surveillance and entry quarantine for dengue infections following a fever screening program in Taiwan Kuan, Mei-Mei; Chang, Feng-Yee 2012 2012-08-06 COMM-USE N PMC3462143 22867003.0 10.1186/1471-2334-12-182 ong6f9al 0.302549 Choi_2011, Lekana-Douki_2013, Phan_2019, Win_K_2011, Cheng_2017 Kuan_2010, Chen_2018, Park_2015
498 Aguirre-Duarte_2020 There are asymptomatic and pre-symptomatic patients infected with COVID-19. So what? Pandemic response implications Nelson Aguirre-Duarte 2020 2020-04-11 BioRxiv Y 10.1101/2020.04.08.20054023 nadzy6lm 0.301591 Lipsitch_2014, Walker_2010, UNKNOWN_2010, UNKNOWN_2020, Griffiths_2010 Al-Tawfiq_2019, Grant_2019, Marchese-Ragona_2020, Moreira_2018
499 Wei_C_2020 The focus and timing of COVID-19 pandemic control measures under healthcare resource constraints Chen Wei; Zhengyang Wang; Zhichao Liang; Quanying Liu 2020 2020-04-19 BioRxiv Y 10.1101/2020.04.16.20067611 5psqro9d 0.301591 Coker_2007, Mwabu_2008, Stenseth_2008, Zhou_2020, Li_C_2018
500 DiGiovanni_2005 Quarantine Stressing Voluntary Compliance DiGiovanni, Cleto; Bowen, Nancy; Ginsberg, Michele; Giles, Gregory 2005 2005-11-23 PMC N PMC3367339 16318738.0 10.3201/eid1111.050661 bu617h9z 0.301197 Esswein_2004, Rodier_2007, Fielding_2014, Griffiths_2010 Xiang_2020
501 Roosa_2020 Short-term Forecasts of the COVID-19 Epidemic in Guangdong and Zhejiang, China: February 13–23, 2020 Roosa, Kimberlyn; Lee, Yiseul; Luo, Ruiyan; Kirpich, Alexander; Rothenberg, Richard; Hyman, James M.; Yan, Ping; Chowell, Gerardo 2020 2020-02-22 COMM-USE Y PMC7073898 32098289.0 10.3390/jcm9020596 5ghslfgt 0.301112 Griffiths_2010, Lim_T_2012, Buseh_2015, UNKNOWN_2010, Rodier_2007 Roosa_2020, Li_M_2020, Distante_2020
502 ISODA_2017 Evaluation of control measures for bovine viral diarrhea implemented in Nemuro District, Hokkaido, Japan, using a scenario tree model ISODA, Norikazu; ASANO, Akihiro; ICHIJO, Michiru; WAKAMORI, Shiho; OHNO, Hiroshi; SATO, Kazuhiko; OKAMOTO, Hirokazu; NAKAO, Shigeru; KATO, Hajime; SAITO, Kazuma; ITO, Naoki; USUI, Akira; TAKAYAMA, Hiroaki; SAKODA, Yoshihiro 2017 2017-05-25 NONCOMM N PMC5559360 28539533.0 10.1292/jvms.17-0108 5qz12dcu 0.301034 Karlsson_2012, Wu_Q_2014, Li_W_2012, Li_C_2018 Nemoto_2014, Tråvén_2001, Pohjola_1986, ISODA_2019
503 Xu_B_2020 Epidemiological data from the COVID-19 outbreak, real-time case information Xu, Bo; Gutierrez, Bernardo; Mekaru, Sumiko; Sewalk, Kara; Goodwin, Lauren; Loskill, Alyssa; Cohn, Emily L.; Hswen, Yulin; Hill, Sarah C.; Cobo, Maria M.; Zarebski, Alexander E.; Li, Sabrina; Wu, Chieh-Hsi; Hulland, Erin; Morgan, Julia D.; Wang, Lin; O’Brien, Katelynn; Scarpino, Samuel V.; Brownstein, John S.; Pybus, Oliver G.; Pigott, David M.; Kraemer, Moritz U. G. 2020 2020-03-24 COMM-USE Y PMC7093412 32210236.0 10.1038/s41597-020-0448-0 l63z3btv 0.300684 Griffiths_2010, Fielding_2014, Rodier_2007, Buseh_2015, UNKNOWN_2010 Ma_S_2020, Ping_2020, Xia_W_2020
504 McCoy_2020 CAN-NPI: A Curated Open Dataset of Canadian Non-Pharmaceutical Interventions in Response to the Global COVID-19 Pandemic Liam G McCoy; Jonathan Smith; Kavya Anchuri; Isha Berry; Joanna Pineda; Vinyas Harish; Andrew T Lam; Seung Eun Yi; Sophie Hu; Benjamin Fine 2020 2020-04-22 BioRxiv Y 10.1101/2020.04.17.20068460 zp4oddrt 0.300399 Coker_2007, Griffiths_2010, Mwabu_2008, Zhou_2020, Wei_B_2011
505 Braithwaite_2020 Automated and semi-automated contact tracing: Protocol for a rapid review of available evidence and current challenges to inform the control of COVID-19 Isobel Braithwaite; Tom Callender; Miriam Bullock; Rob Aldridge 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.14.20063636 xph08fwv 0.300252 Rodier_2007, Murray_2017, Coker_2007, UNKNOWN_2010, Griffiths_2010