1 |
virus |
sars-cov |
binding |
dubs |
ISG15 |
dimer |
PRRSV |
macro |
nsp10 |
cleavage |
M1 |
= |
3cpro |
chapter |
cathepsin |
2 |
activity |
respiratory |
site |
ubiquitin |
DUB |
m(pro |
proteinase |
macro domain |
mtase |
furin |
peptidases |
crystals |
3C |
chapters |
cathepsin l |
3 |
replication |
syndrome |
active site |
enzymes |
ub |
dimerization |
nsp4 |
toxin |
nsp16 |
trypsin |
cathepsins |
nsp15 |
EV71 |
subject |
nipah |
4 |
viral |
severe |
active |
cellular |
plpro |
pl(pro |
nsp11 |
bacterial |
methylation |
substrate |
aminopeptidases |
Å |
HAV |
edition |
mnsp15 |
5 |
protease |
acute |
structure |
modification |
deubiquitinating |
monomer |
cleavage |
clan |
cap |
position |
aminopeptidase |
space |
HEV |
chemistry |
cscatl |
6 |
amino |
coronavirus |
crystal |
probes |
interferon |
dynamics |
predicted |
FAN1 |
RNA |
cleavage site |
USP2 |
asymmetric |
‘ |
sections |
s-crystallin |
7 |
mutations |
SARS |
catalytic |
review |
innate |
MD |
IBV |
nuclease |
nsp14 |
gln |
USP14 |
unit |
DHAV |
biological aspects |
cathepsin h |
8 |
nsp2 |
3clpro |
enzyme |
adp-ribosylation |
ubiquitin |
extra |
reproductive |
endou |
methyltransferase |
positions |
serine |
space group |
x-domain |
preparation |
cscatd |
9 |
RNA |
inhibitors |
structures |
proteins |
immune |
dimeric |
MHV |
superfamily |
mrna |
P3 |
enhance |
parameters |
2A |
cleave proteins |
catalytic site |
10 |
in vitro |
protease |
complex |
processes |
isgylation |
catalytic machinery |
3c-like proteinase |
domains |
polymerase |
peptide |
tissue |
resolution |
dhav 3c protease |
third edition |
WT |
11 |
vitro |
3cl(pro |
pocket |
DNA |
ubiquitin-like |
simulations |
1a |
bacteria |
SAM |
cov‐hku1 |
hemoglobin |
unit-cell |
+ |
handbook |
antigen |
12 |
CHIKV |
mers-cov |
substrate |
functions |
OTU |
extra domain |
MHV-A59 |
iga1 |
nsp8 |
nia |
TEB4 |
asymmetric unit |
ORF1 |
distinguishing |
trme |
13 |
mutant |
compounds |
mechanism |
discuss |
responses |
molecular dynamics |
deletion |
proteases |
rdrp |
ser |
neurodegenerative |
unit-cell parameters |
RAP80 |
aims |
tap |
14 |
amino acids |
assay |
interactions |
macrodomain |
response |
analytical |
ORF |
systems |
nsp12 |
P2 |
m1 aminopeptidases |
crystallized |
transcriptional activity |
reference |
gsp |
15 |
enzymatic |
drug |
structural |
recent |
signaling |
ACE2 |
respiratory syndrome virus |
identity |
methyltransferases |
P4 |
families |
crystallization |
3AB |
history |
P102 |
16 |
protein |
design |
reaction |
including |
chains |
interface |
p28 |
newly |
nsp7 |
cleaved |
inhibitors |
diffracted |
hev-protease |
keywords |
gspa |
17 |
polyprotein |
acute respiratory syndrome |
crystal structures |
protein |
IFN |
ultracentrifugation |
porcine |
classification |
n7-guanine |
P5 |
family |
belonged |
hepatitis |
peptidase |
feline |
18 |
residues |
main |
crystal structure |
E3 |
infection |
protomer |
sites |
macro domains |
capping |
vpg-pro |
cancer |
° |
transcriptional |
organized |
ctfs |
19 |
proteins |
inhibitory |
bound |
ligases |
USP18 |
dimer interface |
3clpro |
rv0888 |
helicase |
ZT |
proteases |
β |
3c protease |
structural chemistry |
trifluoroketone |
20 |
mutants |
development |
bond |
target |
species |
loop |
nsp1α |
eukaryotes |
replication/transcription |
pro |
degradation |
Å. |
FMDV |
800 |
APP |
21 |
acids |
inhibitor |
model |
cellular processes |
MERS |
machinery |
arterivirus |
eukaryotic |
rlmm |
P1 |
UPS |
group |
enterovirus |
work |
CHES |
22 |
viruses |
target |
report |
regulation |
viral infection |
form |
nsps |
proteins |
rna-cap |
arg |
fatty |
α |
cys172 |
describing |
SCF-I2 |
23 |
mutation |
3CL |
group |
marylation |
polyub |
mers-cov pl(pro |
infectious bronchitis virus |
iga1 proteases |
surface |
p2 position |
APN |
γ |
luciferase |
peptides |
induces |
24 |
acid |
attractive |
molecular |
UB |
tumor |
N214A |
bronchitis |
VEEV |
VI |
substrates |
proteasome |
belong |
picornaviral |
aspects |
L. |
25 |
expression |
acute respiratory syndrome coronavirus |
pockets |
therapeutic |
interferon-stimulated |
dynamic |
processing |
flap |
2′-O |
sites |
membrane |
escherichia |
octahydroisochromene |
comprehensive |
catfish |
26 |
virus replication |
sars-cov 3clpro |
inhibitor |
important |
ifn-β |
catalytic |
ibv-infected |
adp-ribose |
2′-o-methyltransferase |
tag |
cell |
content |
chaperone |
IV |
cpnanicd |
27 |
viral replication |
mpro |
comparison |
deubiquitinating enzymes |
ovarian |
structure |
encoded |
PA |
N7 |
vpg |
result |
escherichia coli |
ORF3 |
enzymes |
protoplasts |
28 |
motif |
coronaviruses |
observed |
TARG1 |
deubiquitinating activity |
R298A |
products |
nucleases |
mrnas |
S1′ |
members |
cloned |
ev71 3cpro |
features |
lens |
29 |
papain-like |
coronaviral |
papain |
post-translational |
votus |
homodimer |
demonstrated |
comprises |
s-adenosyl-l-methionine |
iprot-sub |
natural |
90 |
foot-and-mouth |
biological |
lepidoptera |
30 |
domain |
antiviral |
fold |
pathways |
viral |
STI/A |
nonstructural |
CLN2 |
mtases |
sequence |
natural products |
diffraction |
azaglutamine |
cleave |
endoribonuclease-u |
31 |
processing |
potent |
residues |
activity-based |
type |
m(pro)-c |
nucleotides |
β-hairpin |
2'-O |
fusion |
prostate |
endoribonuclease |
β-ribbon |
NP |
cathepsin l. |
32 |
function |
PEDV |
S2 |
regulates |
host |
catalysis |
3c-like |
includes |
genetics |
site |
n-acyl |
Å(3 |
biosensor |
DPP |
USP12 |
33 |
wild-type |
activity |
recognition |
repair |
plps |
stable |
dipeptide |
human |
2′O |
TV |
cysteine cathepsins |
da(−1 |
1-position |
dsrna |
niv |
34 |
proteolytic activity |
kinetic |
hydrogen |
targets |
isg15s |
enzyme |
flanking |
common |
gtase |
specificities |
falcipain-2 |
molecules |
coxsackie |
specificity |
long-range |
35 |
study |
cov |
cysteine |
chains |
nairovirus |
conformation |
arteriviridae |
nsp9 |
cap methylation |
fusion proteins |
falciparum |
coli |
chaperone activity |
proteinase |
fusion |
36 |
dicer |
sars-cov mpro |
S1 |
parps |
15 |
active |
1a/1b |
TSHSV |
RTC |
hemagglutinin |
FAAH |
collected |
acidic domain |
proteolytic |
GST |
37 |
processed |
peptide |
oxyanion |
human |
USP9X |
dissociation |
beaudette |
tas |
l protein |
ELP |
calpain |
uridylate |
acidic |
publisher |
catalyzes |
38 |
analysis |
enzyme |
mpro |
ubiquitylation |
innate immune response |
covmpro |
ZF |
secretory |
tetrad |
tetrapeptide |
caspase-6 |
encodes |
alpha |
lassa |
% |
39 |
non-structural proteins |
viral |
substrate binding |
PARP |
votu |
dimers |
mutagenesis |
positive-strand rna viruses |
domain |
RV |
cysteine |
diffract |
NEMO |
specific |
neu5ac |
40 |
studies |
east |
catalytically |
E1 |
UL36-DUB |
active dimer |
cells |
prokaryotic |
conserved |
nia protease |
inhibition |
antiviral drug design |
picornain |
lassa virus |
subunits |
41 |
essential |
3c-like protease |
water |
dna damage |
gene |
SARS |
domains |
clan proteases |
complex |
P(1 |
aptamers |
NP-NTD |
kinetic analysis |
DAP |
protein |
42 |
exhibited |
essential |
2H |
mono-adp-ribosylation |
otus |
main |
mhv 3clpro |
CDI |
protein |
P2′ |
m1 family |
precipitant |
firefly |
pmdap |
acid |
43 |
PRO |
IC50 |
warhead |
role |
USP15 |
fold |
nsp10a |
α(h |
exoribonuclease |
tags |
phenformin |
cubic |
benserazide |
exonucleases |
13-fold |
44 |
chikungunya |
optimization |
catalytic dyad |
substrates |
isopeptidase |
domain |
290-kda |
widespread |
(+)RNA |
trans-activity |
subtilase |
BSA |
a.a |
ivs |
2’-5 |
45 |
dicer protein |
inhibitory activity |
results |
biological |
deisgylating |
polyproteins |
ibv-infected cells |
hfan1 |
methylated |
P(2 |
plasma |
120 |
rupintrivir |
dipeptidyl |
anion |
46 |
virus-encoded |
peptidomimetic |
propose |
addition |
deisgylase |
residues |
zf domain |
SUKH |
structure |
kexin |
secreted |
hcov-hku1 |
picornavirus |
850 |
melanin |
47 |
VV |
antivirals |
cys145 |
parylation |
USP25 |
mutation |
PRRS |
phosphate |
region |
P(4 |
RING |
calculated |
protease |
silver |
2.35-Å |
48 |
catalytic |
study |
specificity |
UBL |
CCHFV |
allostery |
frame |
toxins |
sinefungin |
H5N1 |
falcipain-3 |
% |
yeast cells |
fly |
week |
49 |
found |
therapeutics |
inhibitors |
biology |
deubiquitinating enzyme |
n-finger |
1a/1b polyproteins |
DNA |
s-adenosylmethionine-dependent |
met |
FP-2 |
PEG |
v(max |
pestivirus |
exquisite |
50 |
nsp1 |
resonance |
decahydroisoquinolin |
ZUFSP |
activity |
x‐ray |
swine |
conserved |
nsp10/nsp16 |
occupied |
lysosomal |
genome-encoded |
S10 |
494 |
blocker |