Topic 13 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 55 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Zhou_2017 Assessing activity of Hepatitis A virus 3C protease using a cyclized luciferase-based biosensor Zhou, Junwei; Wang, Dang; Xi, Yongqiang; Zhu, Xinyu; Yang, Yuting; Lv, Mengting; Luo, Chuanzhen; Chen, Jiyao; Ye, Xu; Fang, Liurong; Xiao, Shaobo 2017 2017-07-08 None N PMC7092888 28501618.0 10.1016/j.bbrc.2017.05.063 0afohen0 0.664091 van_der_Linden_2014, Saraswat_2020, Deng_2019
2 Parvez_2014 Molecular modeling and analysis of hepatitis E virus (HEV) papain-like cysteine protease Parvez, Mohammad Khalid; Khan, Azmat Ali 2014 2014-01-22 PMC N PMC7114377 24321124.0 10.1016/j.virusres.2013.11.016 ok5fi567 0.607315 Rozanov_1995, Someya_2008
3 Parvez_2015 The hepatitis E virus ORF1 ‘X-domain’ residues form a putative macrodomain protein/Appr-1″-pase catalytic-site, critical for viral RNA replication Parvez, Mohammad Khalid 2015 2015-07-15 PMC N PMC7127128 25870943.0 10.1016/j.gene.2015.04.026 ogsazued 0.556502 Parvez_2013
4 Sun_D_2019 Biochemical characterization of recombinant Avihepatovirus 3C protease and its localization Sun, Di; Wang, Mingshu; Wen, Xingjian; Mao, Sai; Cheng, Anchun; Jia, Renyong; Yang, Qiao; Wu, Ying; Zhu, Dekang; Chen, Shun; Liu, Mafeng; Zhao, Xinxin; Zhang, Shaqiu; Chen, Xiaoyue; Liu, Yunya; Yu, Yanling; Zhang, Ling 2019 2019-04-29 COMM-USE N PMC6489322 31036013.0 10.1186/s12985-019-1155-3 rlzh9u6v 0.529718 Yang_2010 van_der_Linden_2014, Pastorino_2008
5 Yang_2010 Enterovirus type 71 2A protease functions as a transcriptional activator in yeast Yang, Chee-Hing; Li, Hui-Chun; Jiang, Jeng-Geng; Hsu, Che-Fang; Wang, Yi-Jen; Lai, Meng-Jiun; Juang, Yue-Li; Lo, Shih-Yen 2010 2010-08-04 COMM-USE N PMC2923119 20682079.0 10.1186/1423-0127-17-65 ums99z8p 0.499784 van_der_Linden_2014, Someya_2008
6 Tang_2014 The identification and characterization of nucleic acid chaperone activity of human enterovirus 71 nonstructural protein 3AB Tang, Fenfen; Xia, Hongjie; Wang, Peipei; Yang, Jie; Zhao, Tianyong; Zhang, Qi; Hu, Yuanyang; Zhou, Xi 2014 2014-09-30 PMC N PMC7112070 25113906.0 10.1016/j.virol.2014.07.037 wefxs64p 0.450925 van_der_Linden_2014
7 Yin_J_2005 Dual Modes of Modification of Hepatitis A Virus 3C Protease by a Serine-derived β-Lactone: Selective Crystallization and Formation of a Functional Catalytic Triad in the Active Site Yin, Jiang; Bergmann, Ernst M.; Cherney, Maia M.; Lall, Manjinder S.; Jain, Rajendra P.; Vederas, John C.; James, Michael N.G. 2005 2005-12-09 PMC N PMC7118759 16288920.0 10.1016/j.jmb.2005.09.074 bcs73g1b 0.447778 Yang_2010 Grazioso_2012, Someya_2008, Kanitz_2019
8 Cui_S_2011 Crystal Structure of Human Enterovirus 71 3C Protease Cui, Sheng; Wang, Jing; Fan, Tingting; Qin, Bo; Guo, Li; Lei, Xiaobo; Wang, Jianwei; Wang, Meitian; Jin, Qi 2011 2011-05-06 PMC N PMC7094522 21396941.0 10.1016/j.jmb.2011.03.007 ar1yjoux 0.430803
9 Parvez_2013 Molecular characterization of hepatitis E virus ORF1 gene supports a papain-like cysteine protease (PCP)-domain activity Parvez, Mohammad Khalid 2013 2013-12-26 PMC N PMC7125709 23978667.0 10.1016/j.virusres.2013.07.020 o439iy1p 0.425702 Yang_2010
10 Huang_1999 Synthesis and testing of azaglutamine derivatives as inhibitors of Hepatitis A Virus (HAV) 3C proteinase Huang, Yanting; Malcolm, Bruce A; Vederas, John C 1999 1999-04-30 PMC N 10353640.0 10.1016/s0968-0896(99)00006-1 l33tpv54 0.418761 Yang_2010, Vaughan_2012
11 Yoshizawa_2020 Evaluation of an octahydroisochromene scaffold used as a novel SARS 3CL protease inhibitor Yoshizawa, Shin-ichiro; Hattori, Yasunao; Kobayashi, Kazuya; Akaji, Kenichi 2020 2020-02-15 PMC N PMC7127348 31926775.0 10.1016/j.bmc.2019.115273 c5m4dj9m 0.374807 Schlieker_2007, Sato_2019 Shimamoto_2015
12 Yan_J_2007 RAP80 interacts with the SUMO-conjugating enzyme UBC9 and is a novel target for sumoylation Yan, Jun; Yang, Xiao-Ping; Kim, Yong-Sik; Joo, Joung Hyuck; Jetten, Anton M. 2007 2007-10-01 PMC N PMC2049087 17698038.0 10.1016/j.bbrc.2007.07.158 1yjd3rky 0.341283 Sato_2019 Sato_2019
13 Lee_C_2007 Structural basis of mercury- and zinc-conjugated complexes as SARS-CoV 3C-like protease inhibitors Lee, Cheng-Chung; Kuo, Chih-Jung; Hsu, Min-Feng; Liang, Po-Huang; Fang, Jim-Min; Shie, Jiun-Jie; Wang, Andrew H.-J. 2007 2007-11-27 PMC N PMC7094272 17981158.0 10.1016/j.febslet.2007.10.048 9lw756zk 0.338476 Sato_2019, Schlieker_2007 Grazioso_2012, Lee_C_2009
14 Anang_2016 Identification of critical residues in Hepatitis E virus macro domain involved in its interaction with viral methyltransferase and ORF3 proteins Anang, Saumya; Subramani, Chandru; Nair, Vidya P.; Kaul, Sheetal; Kaushik, Nidhi; Sharma, Chandresh; Tiwari, Ashutosh; Ranjith-Kumar, CT; Surjit, Milan 2016 2016-04-26 COMM-USE N PMC4844956 27113483.0 10.1038/srep25133 e3r0flt6 0.338129
15 Huitema_2008 Heteroaromatic ester inhibitors of hepatitis A virus 3C proteinase: Evaluation of mode of action Huitema, Carly; Zhang, Jianmin; Yin, Jiang; James, Michael N.G.; Vederas, John C.; Eltis, Lindsay D. 2008 2008-05-15 PMC N PMC7125897 18407505.0 10.1016/j.bmc.2008.03.059 r1mkkg54 0.329758 Yang_2010 Grazioso_2012, Kuo_C_2008, van_der_Linden_2014, Becker_2016