Topic 10 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 35 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Li_Y_2010 EST analysis reveals putative genes involved in glycyrrhizin biosynthesis Li, Ying; Luo, Hong-Mei; Sun, Chao; Song, Jing-Yuan; Sun, Yong-Zhen; Wu, Qiong; Wang, Ning; Yao, Hui; Steinmetz, André; Chen, Shi-Lin 2010 2010-04-28 COMM-USE N PMC2886062 20423525.0 10.1186/1471-2164-11-268 yqv02aav 0.831210 Yu_H_2007
2 Chen_2015 Transcriptome Analysis Reveals the Mechanism Underlying the Production of a High Quantity of Chlorogenic Acid in Young Leaves of Lonicera macranthoides Hand.-Mazz Chen, Zexiong; Tang, Ning; You, Yuming; Lan, Jianbin; Liu, Yiqing; Li, Zhengguo 2015 2015-09-18 COMM-USE N PMC4575056 26381882.0 10.1371/journal.pone.0137212 cgi710bl 0.825912 Wang_2007, Zhang_2016, Li_Y_2010
3 Zhu_L_2008 ESTs analyses of Lampetra japonica liver and comparation transcriptome with the jawed vertebrates Zhu, LiNa; Dai, YaLi; Ma, Fei; Li, QingWei 2008 2008-01-01 PMC N PMC7089351 18176788.0 10.1007/s11427-008-0002-3 52kxbzl3 0.710396 Wang_2007
4 Tchitchek_2014 Sequencing, Annotation and Analysis of the Syrian Hamster (Mesocricetus auratus) Transcriptome Tchitchek, Nicolas; Safronetz, David; Rasmussen, Angela L.; Martens, Craig; Virtaneva, Kimmo; Porcella, Stephen F.; Feldmann, Heinz; Ebihara, Hideki; Katze, Michael G. 2014 2014-11-14 COMM-USE N PMC4232415 25398096.0 10.1371/journal.pone.0112617 4ueabl9p 0.698313 Zhu_L_2008
5 Zhang_2016 De Novo Assembly and Comparative Transcriptome Analysis Provide Insight into Lysine Biosynthesis in Toona sinensis Roem Zhang, Xia; Song, Zhenqiao; Liu, Tian; Guo, Linlin; Li, Xingfeng 2016 2016-06-07 COMM-USE N PMC4914729 27376077.0 10.1155/2016/6735209 jjzts6a7 0.640634 Zhu_L_2008, Wang_2007
6 ZHOU_2016 Methylation profile of bovine Oct4 gene coding region in relation to three germ layers ZHOU, Xin-yu; LIU, Liang-liang; JIA, Wen-chao; PAN, Chuan-ying 2016 2016-03-31 PMC N PMC7128269 10.1016/s2095-3119(15)61100-5 tffqvpas 0.622381 Wang_2007, Bedadala_2007 Zhang_2015
7 Espindola_2018 Inferring the presence of aflatoxin-producing Aspergillus flavus strains using RNA sequencing and electronic probes as a transcriptomic screening tool Andres S. Espindola; William Schneider; Kitty F. Cardwell; Yisel Carrillo; Peter R. Hoyt; Stephen M. Marek; Hassan Melouk; Carla D. Garzon 2018 2018-07-09 BioRxiv N 10.1101/365254 hdwn2fkj 0.593632 Yu_H_2007
8 Hakmé_2007 The macroPARP genes parp‐9 and parp‐14 are developmentally and differentially regulated in mouse tissues Hakmé, Antoinette; Huber, Aline; Dollé, Pascal; Schreiber, Valérie 2007 2007-12-10 PMC N PMC7163462 18069692.0 10.1002/dvdy.21399 bg8nvgim 0.584993 Haasnoot_2010, Wang_2007, Trobaugh_2017, Atianand_2014
9 Li_W_2013 Molecular cloning, genomic structure, polymorphism and expression analysis of major histocompatibility complex class IIA gene of swamp eel Monopterus albus Li, Wei; Sun, Wen-xiu; Meng, Liang; Hong, Deng-wei 2013 2013-12-20 PMC N PMC7089440 10.2478/s11756-013-0307-y qi9ex3l5 0.576319
10 Gong_2011 Disease embryo development network reveals the relationship between disease genes and embryo development genes Gong, Binsheng; Liu, Tao; Zhang, Xiaoyu; Chen, Xi; Li, Jiang; Lv, Hongchao; Zou, Yi; Li, Xia; Rao, Shaoqi 2011 2011-10-21 PMC N PMC7094120 21824480.0 10.1016/j.jtbi.2011.07.018 cs0eifdc 0.548336 Haasnoot_2010, Trobaugh_2017, Atianand_2014 Zhong_2017
11 Camp_2012 De-Novo Transcriptome Sequencing of a Normalized cDNA Pool from Influenza Infected Ferrets Camp, Jeremy V.; Svensson, Thomas L.; McBrayer, Alexis; Jonsson, Colleen B.; Liljeström, Peter; Bruder, Carl E. 2012 2012-05-11 COMM-USE N PMC3350496 22606336.0 10.1371/journal.pone.0037104 26wvtnvd 0.534423 Trobaugh_2017, Haasnoot_2010
12 Liu_S_2015 Comparative Analysis of Transcriptional Profiles of Adult Schistosoma japonicum from Different Laboratory Animals and the Natural Host, Water Buffalo Liu, Shuai; Zhou, Xiaosu; Piao, Xianyu; Wu, Chuang; Hou, Nan; Chen, Qijun 2015 2015-08-18 COMM-USE N PMC4540470 26285138.0 10.1371/journal.pntd.0003993 nv6943pm 0.507746 Haasnoot_2010, Trobaugh_2017, Etebari_2016
13 Ying_2015 Transcriptome sequencing and development of an expression microarray platform for liver infection in adenovirus type 5-infected Syrian golden hamsters Ying, Baoling; Toth, Karoly; Spencer, Jacqueline F.; Aurora, Rajeev; Wold, William S.M. 2015 2015-11-30 PMC N PMC4619110 26319212.0 10.1016/j.virol.2015.07.024 zf7us6mu 0.453597 Trobaugh_2017, Haasnoot_2010
14 Razvi_2007 Transcriptional oncogenomic hot spots in Barrett's adenocarcinomas: Serial analysis of gene expression Razvi, Mohammad H.; Peng, Dunfa; Dar, Altaf A.; Powell, Steven M.; Frierson, Henry F.; Moskaluk, Christopher A.; Washington, Kay; El‐Rifai, Wael 2007 2007-07-17 PMC N PMC7165894 17636545.0 10.1002/gcc.20479 w4tps34p 0.413418 Wang_2007, Yu_H_2007
15 Xu_Y_2012 Transcriptome and Comparative Gene Expression Analysis of Sogatella furcifera (Horváth) in Response to Southern Rice Black-Streaked Dwarf Virus Xu, Yi; Zhou, Wenwu; Zhou, Yijun; Wu, Jianxiang; Zhou, Xueping 2012 2012-04-27 COMM-USE N PMC3338671 22558400.0 10.1371/journal.pone.0036238 i05h8csb 0.412945 Trobaugh_2017 Thibivilliers_2009
16 Silveyra_2014 Knockdown of Drosha in human alveolar type II cells alters expression of SP-A in culture: a pilot study Silveyra, Patricia; Chroneos, Zissis C; DiAngelo, Susan L; Thomas, Neal J; Noutsios, Georgios T; Tsotakos, Nikolaos; Howrlylak, Judie A; Umstead, Todd M; Floros, Joanna 2014 2014-07-24 PMC N PMC4197128 25058539.0 10.3109/01902148.2014.929757 22h4242g 0.411055 Trobaugh_2017, Haasnoot_2010, Wang_2007, Herbert_2016
17 Zhong_2017 Host genes regulate transcription of sperm-introduced hepatitis B virus genes in embryo Zhong, Ying; Liu, Dong-Ling; Ahmed, Mohamed Morsi. M.; Li, Peng-Hao; Zhou, Xiao-Ling; Xie, Qing-Dong; Xu, Xiao-Qing; Han, Ting-Ting; Hou, Zhi-Wei; Zhong, Chen-Yao; Huang, Ji-Hua; Zeng, Fei; Huang, Tian-Hua 2017 2017-10-31 PMC N PMC7127588 28822827.0 10.1016/j.reprotox.2017.08.009 8r851j4t 0.353003 Trobaugh_2017, Wang_2007, Brake_2008 Haddad_2011
18 Kim_J_2017 Characterization of the Transcriptome and Gene Expression of Brain Tissue in Sevenband Grouper (Hyporthodus septemfasciatus) in Response to NNV Infection Kim, Jong-Oh; Kim, Jae-Ok; Kim, Wi-Sik; Oh, Myung-Joo 2017 2017-01-13 COMM-USE N PMC5295026 28098800.0 10.3390/genes8010031 flbibrcm 0.336271 Trobaugh_2017
19 Wang_2019 Identification of DNA methylation regulated novel host genes relevant to inhibition of virus replication in porcine PK15 cell using double stranded RNA mimics and DNA methyltransferase inhibitor Wang, Xiaoshuo; Ao, Hong; Song, Minyan; Bai, Lijing; He, Weiyong; Wang, Chuduan; Yu, Ying 2019 2019-12-31 None N PMC7125705 30315899.0 10.1016/j.ygeno.2018.09.020 cwlo3qpg 0.330174 Trobaugh_2017, Haasnoot_2010, Herbert_2016 Trypsteen_2016, Zhong_2017