| 1 |
Wu_T_2011 |
GmPHD5 acts as an important regulator for crosstalk between histone H3K4 di-methylation and H3K14 acetylation in response to salinity stress in soybean |
Wu, Tao; Pi, Er-Xu; Tsai, Sau-Na; Lam, Hon-Ming; Sun, Sai-Ming; Kwan, Yiu Wa; Ngai, Sai-Ming |
2011 |
2011-12-15 |
COMM-USE |
N |
PMC3288756 |
22168212.0 |
10.1186/1471-2229-11-178 |
ue2zl8yl |
0.829685 |
Bedadala_2007 |
|
| 2 |
Jia_Z_2020 |
Tandem CTCF sites function as insulators to balance spatial chromatin contacts and topological enhancer-promoter selection |
Jia, Zhilian; Li, Jingwei; Ge, Xiao; Wu, Yonghu; Guo, Ya; Wu, Qiang |
2020 |
2020-03-23 |
COMM-USE |
N |
PMC7087399 |
|
10.1186/s13059-020-01984-7 |
jvbcau6m |
0.749789 |
Wang_2007 |
|
| 3 |
Chen_2010 |
Alternative splicing of CD200 is regulated by an exonic splicing enhancer and SF2/ASF |
Chen, Zhiqi; Ma, Xuezhong; Zhang, Jianhua; Hu, Jim; Gorczynski, Reginald M. |
2010 |
2010-06-17 |
NONCOMM |
N |
PMC2965252 |
20558599.0 |
10.1093/nar/gkq554 |
812uc4w7 |
0.723668 |
Wang_2007, Bedadala_2007 |
|
| 4 |
Hu_F_2017 |
Expression profile and promoter analysis of HEPIS |
Hu, Fen; Zhang, Yunfeng |
2017 |
2017-10-25 |
PMC |
N |
PMC5763650 |
29399063.0 |
10.3892/etm.2017.5374 |
ih0z0ohw |
0.711305 |
Bedadala_2007, Wang_2007, Brake_2008 |
Wang_2009, Haddad_2011 |
| 5 |
Dinh_2020 |
Hotspots of aberrant enhancer activity in fibrolamellar carcinoma reveal molecular mechanisms of oncogenesis and intrinsic drug resistance |
Timothy A. Dinh; Ramja Sritharan; F. Donelson Smith; Adam B. Francisco; Rosanna K. Ma; Rodica P. Bunaciu; Matt Kanke; Charles G. Danko; Andrew P. Massa; John D. Scott; Praveen Sethupathy |
2020 |
2020-01-18 |
BioRxiv |
N |
|
|
10.1101/2020.01.18.911297 |
bf4qpsy7 |
0.673423 |
Haasnoot_2010, Trobaugh_2017, Atianand_2014 |
|
| 6 |
Kim_T_2013 |
Escherichia coli YmdB regulates biofilm formation independently of its role as an RNase III modulator |
Kim, Taeyeon; Lee, Juyeon; Kim, Kwang-sun |
2013 |
2013-11-24 |
COMM-USE |
N |
PMC4222554 |
24267348.0 |
10.1186/1471-2180-13-266 |
zz3taimh |
0.661698 |
Haasnoot_2010, Trobaugh_2017 |
|
| 7 |
Fei_T_2009 |
Genome-wide mapping of SMAD target genes reveals the role of BMP signaling in embryonic stem cell fate determination |
Fei, Teng; Xia, Kai; Li, Zhongwei; Zhou, Bing; Zhu, Shanshan; Chen, Hua; Zhang, Jianping; Chen, Zhang; Xiao, Huasheng; Han, Jing-Dong J.; Chen, Ye-Guang |
2009 |
2009-11-19 |
None |
N |
PMC2798829 |
19926752.0 |
10.1101/gr.092114.109 |
t014t7do |
0.635406 |
|
|
| 8 |
Yang_2019 |
miR-1306 Mediates the Feedback Regulation of the TGF-β/SMAD Signaling Pathway in Granulosa Cells |
Yang, Liu; Du, Xing; Liu, Lu; Cao, Qiuyu; Pan, Zengxiang; Li, Qifa |
2019 |
2019-03-31 |
COMM-USE |
N |
PMC6523565 |
30935128.0 |
10.3390/cells8040298 |
16qix4ab |
0.537765 |
Bedadala_2007 |
|
| 9 |
Chang_2006 |
Influence of intron and exon splicing enhancers on mammalian cell expression of a truncated spike protein of SARS-CoV and its implication for subunit vaccine development |
Chang, Chia-Yin; Hong, Willy W.L.; Chong, Pele; Wu, Suh-Chin |
2006 |
2006-02-20 |
PMC |
N |
PMC7115599 |
16194584.0 |
10.1016/j.vaccine.2005.09.011 |
d9x1wii6 |
0.533252 |
Wang_2007, Brake_2008 |
Wang_2009 |
| 10 |
Keele_2020 |
Integrative QTL analysis of gene expression and chromatin accessibility identifies multi-tissue patterns of genetic regulation |
Keele, Gregory R.; Quach, Bryan C.; Israel, Jennifer W.; Chappell, Grace A.; Lewis, Lauren; Safi, Alexias; Simon, Jeremy M.; Cotney, Paul; Crawford, Gregory E.; Valdar, William; Rusyn, Ivan; Furey, Terrence S. |
2020 |
2020-01-21 |
None |
N |
PMC7010298 |
31961859.0 |
10.1371/journal.pgen.1008537 |
ycbpeud4 |
0.521926 |
Wang_2007, Trobaugh_2017, Atianand_2014, Haasnoot_2010 |
Trypsteen_2016 |
| 11 |
Miaskowski_2019 |
Perturbations in neuroinflammatory pathways are associated with paclitaxel-induced peripheral neuropathy in breast cancer survivors |
Miaskowski, Christine; Topp, Kimberly; Conley, Yvette P.; Paul, Steven M.; Melisko, Michelle; Schumacher, Mark; Chesney, Margaret; Abrams, Gary; Levine, Jon D.; Kober, Kord M. |
2019 |
2019-10-15 |
PMC |
N |
PMC6788784 |
31401418.0 |
10.1016/j.jneuroim.2019.577019 |
yth2uoxm |
0.520360 |
Haasnoot_2010 |
|
| 12 |
Bedadala_2007 |
Early Growth Response gene 1 (Egr-1) regulates HSV-1 ICP4 and ICP22 gene expression |
Bedadala, Gautam R; Pinnoji, Rajeswara C; Hsia, Shao-Chung V |
2007 |
2007-05-15 |
PMC |
N |
PMC7092374 |
17502875.0 |
10.1038/cr.2007.44 |
3sgv0kia |
0.499909 |
|
|
| 13 |
Gomez_2013 |
NeST, a long noncoding RNA, controls microbial susceptibility and epigenetic activation of the Ifng locus |
Gomez, J. Antonio; Wapinski, Orly L.; Yang, Yul W.; Bureau, Jean-François; Gopinath, Smita; Monack, Denise M.; Chang, Howard Y.; Brahic, Michel; Kirkegaard, Karla |
2013 |
2013-02-01 |
PMC |
N |
PMC3577098 |
23415224.0 |
10.1016/j.cell.2013.01.015 |
urddvtta |
0.495304 |
Trobaugh_2017, Herbert_2016, Bedadala_2007, Haasnoot_2010 |
Trypsteen_2016 |
| 14 |
Zhang_2019 |
CRISPR-mediated activation of endogenous BST-2/tetherin expression inhibits wild-type HIV-1 production |
Zhang, Yanzhao; Ozono, Seiya; Yao, Weitong; Tobiume, Minoru; Yamaoka, Shoji; Kishigami, Satoshi; Fujita, Hideaki; Tokunaga, Kenzo |
2019 |
2019-02-28 |
COMM-USE |
N |
PMC6395588 |
30816279.0 |
10.1038/s41598-019-40003-z |
ago3406f |
0.479893 |
Trobaugh_2017 |
Haddad_2011, Baba_2007 |
| 15 |
Gilbertson_2018 |
Changes in mRNA abundance drive shuttling of RNA binding proteins, linking cytoplasmic RNA degradation to transcription |
Gilbertson, Sarah; Federspiel, Joel D; Hartenian, Ella; Cristea, Ileana M; Glaunsinger, Britt |
2018 |
2018-10-03 |
COMM-USE |
N |
PMC6203436 |
30281021.0 |
10.7554/elife.37663 |
cv7rrjxe |
0.477782 |
Trobaugh_2017, Wang_2007 |
|
| 16 |
Amlie-Wolf_2015 |
Transcriptomic Changes Due to Cytoplasmic TDP-43 Expression Reveal Dysregulation of Histone Transcripts and Nuclear Chromatin |
Amlie-Wolf, Alexandre; Ryvkin, Paul; Tong, Rui; Dragomir, Isabelle; Suh, EunRan; Xu, Yan; Van Deerlin, Vivianna M.; Gregory, Brian D.; Kwong, Linda K.; Trojanowski, John Q.; Lee, Virginia M.-Y.; Wang, Li-San; Lee, Edward B. |
2015 |
2015-10-28 |
COMM-USE |
N |
PMC4624943 |
26510133.0 |
10.1371/journal.pone.0141836 |
ccn3f78b |
0.444388 |
Wang_2007 |
|
| 17 |
Kikhno_2014 |
Identification of a Conserved Non-Protein-Coding Genomic Element that Plays an Essential Role in Alphabaculovirus Pathogenesis |
Kikhno, Irina |
2014 |
2014-04-16 |
COMM-USE |
N |
PMC3989284 |
24740153.0 |
10.1371/journal.pone.0095322 |
x5vxc3iu |
0.422613 |
|
|
| 18 |
Magold_2009 |
Gene Expression Profiling in Cells with Enhanced γ-Secretase Activity |
Magold, Alexandra I.; Cacquevel, Matthias; Fraering, Patrick C. |
2009 |
2009-09-18 |
COMM-USE |
N |
PMC2739295 |
19763259.0 |
10.1371/journal.pone.0006952 |
0p8lk12m |
0.397174 |
Haasnoot_2010, Trobaugh_2017, Atianand_2014 |
|
| 19 |
Mathur_2016 |
Analysis of chikungunya virus proteins reveals that non-structural proteins nsP2 and nsP3 exhibit RNA interference (RNAi) suppressor activity |
Mathur, Kalika; Anand, Abhishek; Dubey, Sunil Kumar; Sanan-Mishra, Neeti; Bhatnagar, Raj K.; Sunil, Sujatha |
2016 |
2016-11-30 |
COMM-USE |
N |
PMC5128919 |
27901124.0 |
10.1038/srep38065 |
m99amd4y |
0.397024 |
Trobaugh_2017 |
|
| 20 |
Rawlings_2011 |
Viral RNAi suppressor reversibly binds siRNA to outcompete Dicer and RISC via multiple-turnover |
Rawlings, Renata A.; Krishnan, Vishalakshi; Walter, Nils G. |
2011 |
2011-04-01 |
PMC |
N |
PMC3073027 |
21354178.0 |
10.1016/j.jmb.2011.02.038 |
d1lm5w4s |
0.361100 |
|
|
| 21 |
Hu_F_2019 |
Expression and role of HEPIS in breast cancer |
Hu, Fen; Zhang, Yunfeng; Li, Mi; Bai, Yun; Zhang, Xiujun |
2019 |
2019-10-17 |
NONCOMM |
N |
PMC6865829 |
31788121.0 |
10.3892/ol.2019.10993 |
ekjk9ycx |
0.356747 |
|
Hu_F_2017 |
| 22 |
Wex_T_1997 |
The activation-dependent induction of APN-(CD13) in T-cells is controlled at different levels of gene expression |
Wex, Th; Bühling, F; Arndt, M; Frank, K; Ansorge, S; Lendeckel, U |
1997 |
1997-07-21 |
PMC |
N |
|
9257688.0 |
10.1016/s0014-5793(97)00738-2 |
ebhg0v5d |
0.348302 |
Wang_2007, Brake_2008, Bedadala_2007 |
|
| 23 |
Stevenson_2013 |
Development of a Positive-readout Mouse Model of siRNA Pharmacodynamics |
Stevenson, Mark; Carlisle, Robert; Davies, Ben; Preece, Chris; Hammett, Michelle; Liu, Wei-li; Fisher, Kerry David; Ryan, Amy; Scrable, Heidi; Seymour, Leonard William |
2013 |
2013-11-19 |
NONCOMM |
N |
PMC3889190 |
24253258.0 |
10.1038/mtna.2013.63 |
hs7sw4mc |
0.318526 |
Brake_2008, Froelich_2010, Sakamoto_2007 |
Aurisicchio_2002, Haddad_2011, González-González_2008, Hung_2006 |