Topic 04 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 29 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Chen_2013 Inhibitory and combinatorial effect of diphyllin, a v-ATPase blocker, on influenza viruses Chen, Hui-Wen; Cheng, Jenna Xiao; Liu, Ming-Tsan; King, Kevin; Peng, Ju-Yi; Zhang, Xin-Quan; Wang, Ching-Ho; Shresta, Sujan; Schooley, Robert T.; Liu, Yu-Tsueng 2013 2013-09-30 None N PMC3787953 23820269.0 10.1016/j.antiviral.2013.06.014 8mf49adq 0.755750
2 Potel_2013 EWI‐2wint promotes CD81 clustering that abrogates Hepatitis C Virus entry Potel, Julie; Rassam, Patrice; Montpellier, Claire; Kaestner, Laura; Werkmeister, Elisabeth; Tews, Birke A.; Couturier, Cyril; Popescu, Costin‐Ioan; Baumert, Thomas F.; Rubinstein, Eric; Dubuisson, Jean; Milhiet, Pierre‐Emmanuel; Cocquerel, Laurence 2013 2013-02-16 PMC N PMC7162402 23351194.0 10.1111/cmi.12112 raqapqg0 0.737904 Greene_2012
3 Yang_2020 Trypsin promotes porcine deltacoronavirus mediating cell-to-cell fusion in a cell type-dependent manner Yang, Yue-Lin; Meng, Fandan; Qin, Pan; Herrler, Georg; Huang, Yao-Wei; Tang, Yan-Dong 2020 2020-02-24 COMM-USE N PMC7054919 32090689.0 10.1080/22221751.2020.1730245 69pgy833 0.701620 Compton_2014
4 Vausselin_2013 The antimalarial ferroquine is an inhibitor of hepatitis C virus, Vausselin, Thibaut; Calland, Noémie; Belouzard, Sandrine; Descamps, Véronique; Douam, Florian; Helle, François; François, Catherine; Lavillette, Dimitri; Duverlie, Gilles; Wahid, Ahmed; Fénéant, Lucie; Cocquerel, Laurence; Guérardel, Yann; Wychowski, Czeslaw; Biot, Christophe; Dubuisson, Jean 2013 2013-05-14 PMC N PMC7165689 23348596.0 10.1002/hep.26273 v5a2jeg0 0.655597
5 Jeon_2018 Cholesterol is important for the entry process of porcine deltacoronavirus Jeon, Ji Hyun; Lee, Changhee 2018 2018-07-26 PMC N PMC7087128 30051343.0 10.1007/s00705-018-3967-7 sac6wrbf 0.653666 Compton_2014
6 Sha_Y_2008 A convenient cell fusion assay for the study of SARS‐CoV entry and inhibition Sha, YongGang; Wu, YingLiang; Cao, ZhiJian; Xu, XiuLing; Wu, WenLan; Jiang, DaHe; Mao, Xin; Liu, Hui; Zhu, Ying; Gong, Rui; Li, WenXin 2008 2008-01-03 PMC N PMC7165495 16916786.0 10.1080/15216540600820974 fvtpau89 0.641553
7 Sánchez-Felipe_2012 α2-3- and α2-6- N-linked sialic acids allow efficient interaction of Newcastle Disease Virus with target cells Sánchez-Felipe, Lorena; Villar, Enrique; Muñoz-Barroso, Isabel 2012 2012-08-07 PMC N PMC7088266 22869099.0 10.1007/s10719-012-9431-0 s1hj89kj 0.630006 Compton_2014
8 Tartour_2014 IFITM proteins are incorporated onto HIV-1 virion particles and negatively imprint their infectivity Tartour, Kevin; Appourchaux, Romain; Gaillard, Julien; Nguyen, Xuan-Nhi; Durand, Stéphanie; Turpin, Jocelyn; Beaumont, Elodie; Roch, Emmanuelle; Berger, Gregory; Mahieux, Renaud; Brand, Denys; Roingeard, Philippe; Cimarelli, Andrea 2014 2014-11-25 COMM-USE N PMC4251951 25422070.0 10.1186/s12977-014-0103-y 987w6ypg 0.602854 Compton_2014 Yu_J_2015, Compton_2014
9 Ramanathan_2020 A Sensitive Yellow Fever Virus Entry Reporter Identifies Valosin-Containing Protein (VCP/p97) as an Essential Host Factor for Flavivirus Uncoating Ramanathan, Harish N.; Zhang, Shuo; Douam, Florian; Mar, Katrina B.; Chang, Jinhong; Yang, Priscilla L.; Schoggins, John W.; Ploss, Alexander; Lindenbach, Brett D. 2020 2020-04-14 COMM-USE N PMC7157815 32291299.0 10.1128/mbio.00467-20 pgcbr38i 0.585955
10 Mori_2011 Tamiflu-Resistant but HA-Mediated Cell-to-Cell Transmission through Apical Membranes of Cell-Associated Influenza Viruses Mori, Kotaro; Haruyama, Takahiro; Nagata, Kyosuke 2011 2011-11-30 COMM-USE N PMC3227662 22140536.0 10.1371/journal.pone.0028178 36gbl7tu 0.554201 Compton_2014 Fuller_1985, Krzyzaniak_2013
11 Kempf_1987 A novel method for the detection of early events in cell-cell fusion of Semliki Forest virus infected cells growing in monolayer cultures Kempf, C.; Michel, M. R.; Kohler, U.; Koblet, H. 1987 1987-01-01 PMC N PMC7087209 3606395.0 10.1007/bf01310786 lu62noak 0.534579 Izumida_2016, Greene_2012, Compton_2014 Mori_2011, Krzyzaniak_2013, Whiteley_2017
12 Gunaratne_2018 NAADP-dependent Ca2+ signaling regulates Middle East respiratory syndrome-coronavirus pseudovirus translocation through the endolysosomal system Gunaratne, Gihan S.; Yang, Yang; Li, Fang; Walseth, Timothy F.; Marchant, Jonathan S. 2018 2018-11-30 PMC N PMC6251489 30121440.0 10.1016/j.ceca.2018.08.003 4ftedh1a 0.533932 Greene_2012, Amini-Bavil-Olyaee_2013
13 Federico_2011 HIV-protease inhibitors block the replication of both vesicular stomatitis and influenza viruses at an early post-entry replication step Federico, Maurizio 2011 2011-08-15 PMC N PMC7111985 21620431.0 10.1016/j.virol.2011.05.002 arz8r204 0.516798 Compton_2014
14 Jurgeit_2012 Niclosamide Is a Proton Carrier and Targets Acidic Endosomes with Broad Antiviral Effects Jurgeit, Andreas; McDowell, Robert; Moese, Stefan; Meldrum, Eric; Schwendener, Reto; Greber, Urs F. 2012 2012-10-25 None N PMC3486884 23133371.0 10.1371/journal.ppat.1002976 zlygzsm1 0.499114 Compton_2014
15 Smieszek_2020 Amantadine disrupts lysosomal gene expression; potential therapy for COVID19 Sandra Smieszek; Bart Przychodzen; Mihael H Polymeropoulos 2020 2020-04-05 BioRxiv Y 10.1101/2020.04.05.026187 xwmr7up9 0.489723
16 Lin_L_2013 Broad-spectrum antiviral activity of chebulagic acid and punicalagin against viruses that use glycosaminoglycans for entry Lin, Liang-Tzung; Chen, Ting-Ying; Lin, Song-Chow; Chung, Chueh-Yao; Lin, Ta-Chen; Wang, Guey-Horng; Anderson, Robert; Lin, Chun-Ching; Richardson, Christopher D 2013 2013-08-07 COMM-USE N PMC3750913 23924316.0 10.1186/1471-2180-13-187 ibvbowl0 0.489451
17 Sánchez-Felipe_2014 Entry of Newcastle Disease Virus into the host cell: Role of acidic pH and endocytosis Sánchez-Felipe, Lorena; Villar, Enrique; Muñoz-Barroso, Isabel 2014 2014-01-31 PMC N PMC7094467 23994097.0 10.1016/j.bbamem.2013.08.008 or95ro64 0.476557 Greene_2012, Compton_2014, Zhao_2013 Krzyzaniak_2013, Regan_2013
18 Xia_Y_2017 Secreted Interferon-Inducible Factors Restrict Hepatitis B and C Virus Entry In Vitro Xia, Yuchen; Cheng, Xiaoming; Blossey, Christoph K.; Wisskirchen, Karin; Esser, Knud; Protzer, Ulrike 2017 2017-03-06 COMM-USE N PMC5358466 28367455.0 10.1155/2017/4828936 vbbewppa 0.451488 Compton_2014
19 Bright_2016 Natural Virucidal Compounds in Foods Bright, Kelly R.; Gilling, Damian H. 2016 2016-08-26 PMC N PMC7123660 10.1007/978-3-319-30723-7_16 3zhrz08m 0.448771
20 Cagno_2018 Novel broad spectrum virucidal molecules against enveloped viruses Cagno, Valeria; Tintori, Cristina; Civra, Andrea; Cavalli, Roberta; Tiberi, Marika; Botta, Lorenzo; Brai, Annalaura; Poli, Giulio; Tapparel, Caroline; Lembo, David; Botta, Maurizio 2018 2018-12-07 COMM-USE N PMC6285983 30532192.0 10.1371/journal.pone.0208333 8ak2tths 0.442378
21 Yin_X_2019 Hepatitis E Virus Entry Yin, Xin; Feng, Zongdi 2019 2019-09-20 COMM-USE N PMC6832200 31547135.0 10.3390/v11100883 gs75ebo4 0.427660
22 Harada_2005 The broad anti-viral agent glycyrrhizin directly modulates the fluidity of plasma membrane and HIV-1 envelope Harada, Shinji 2005 2005-11-08 PMC N PMC1317678 16053446.0 10.1042/bj20051069 pg1s7lva 0.424228 Compton_2014, Clapham_1991 Ashkenazi_2012
23 Spiegel_2016 The Role of Phlebovirus Glycoproteins in Viral Entry, Assembly and Release Spiegel, Martin; Plegge, Teresa; Pöhlmann, Stefan 2016 2016-07-21 COMM-USE N PMC4974537 27455305.0 10.3390/v8070202 669k72bv 0.420273
24 Gallagher_1992 Cell receptor-independent infection by a neurotropic murine coronavirus Gallagher, Thomas M.; Buchmeier, Michael J.; Perlman, Stanley 1992 1992-11-30 PMC N PMC7131763 1413526.0 10.1016/0042-6822(92)90223-c pi2xq0b2 0.419421 Compton_2014
25 Zhao_2015 Domain I and II from newly emerging goose tembusu virus envelope protein functions as a dominant-negative inhibitor of virus infectivity Zhao, Dongmin; Huang, Xinmei; Liu, Yuzhuo; Han, Kaikai; Zhang, Jingfeng; Yang, Jing; Xie, Xingxing; Li, Yin 2015 2015-02-28 PMC N 10.1016/j.rvsc.2014.11.003 dt9d90t3 0.416905 Compton_2014
26 Maisa_2009 Inhibition of Lassa Virus Glycoprotein Cleavage and Multicycle Replication by Site 1 Protease-Adapted α(1)-Antitrypsin Variants Maisa, Anna; Ströher, Ute; Klenk, Hans-Dieter; Garten, Wolfgang; Strecker, Thomas 2009 2009-06-02 COMM-USE N PMC2685025 19488405.0 10.1371/journal.pntd.0000446 wk9oxl4n 0.414167 Compton_2014, Greene_2012
27 Yang_2012 Phosphatidylinositol 4-Kinase IIIβ Is Required for Severe Acute Respiratory Syndrome Coronavirus Spike-mediated Cell Entry Yang, Ning; Ma, Ping; Lang, Jianshe; Zhang, Yanli; Deng, Jiejie; Ju, Xiangwu; Zhang, Gongyi; Jiang, Chengyu 2012 2012-01-17 PMC N PMC3318727 22253445.0 10.1074/jbc.m111.312561 1i12ff55 0.408999 Greene_2012 Du_L_2007
28 Makhortova_2007 Neurokinin-1 enables measles virus trans-synaptic spread in neurons Makhortova, Nina; Askovich, Peter; Patterson, Catherine E.; Gechman, Lisa A.; Gerard, Norma P.; Rall, Glenn F. 2007 2007-05-01 PMC N PMC1945128 17434199.0 10.1016/j.virol.2007.02.033 xnraof0f 0.408220 Greene_2012
29 Teissier_2011 Mechanism of Inhibition of Enveloped Virus Membrane Fusion by the Antiviral Drug Arbidol Teissier, Elodie; Zandomeneghi, Giorgia; Loquet, Antoine; Lavillette, Dimitri; Lavergne, Jean-Pierre; Montserret, Roland; Cosset, François-Loïc; Böckmann, Anja; Meier, Beat H.; Penin, François; Pécheur, Eve-Isabelle 2011 2011-01-25 COMM-USE N PMC3026800 21283579.0 10.1371/journal.pone.0015874 pamxy4av 0.408066 Greene_2012, Gnirß_2014 Harada_2005, Park_2017
30 Solomon_Tsegaye_2013 Platelet activation suppresses HIV-1 infection of T cells Solomon Tsegaye, Theodros; Gnirß, Kerstin; Rahe-Meyer, Niels; Kiene, Miriam; Krämer-Kühl, Annika; Behrens, Georg; Münch, Jan; Pöhlmann, Stefan 2013 2013-05-01 COMM-USE N PMC3660175 23634812.0 10.1186/1742-4690-10-48 6olhl2pk 0.402697 Compton_2014 Ma_G_2004
31 Filone_2006 Development and characterization of a Rift Valley fever virus cell–cell fusion assay using alphavirus replicon vectors Filone, Claire Marie; Heise, Mark; Doms, Robert W.; Bertolotti-Ciarlet, Andrea 2006 2006-12-20 PMC N PMC7134558 16945399.0 10.1016/j.virol.2006.07.035 93ze2qmt 0.392991 Compton_2014
32 Leikina_1992 Acidic pH induces fusion of cells infected with baculovirus to form syncytia Leikina, Evgenia; Onaran, H.Ongun; Zimmerberg, Joshua 1992 1992-06-15 PMC N 1618326.0 10.1016/0014-5793(92)80623-o gnnh8mt0 0.388259 Compton_2014 Pastey_2000, Krzyzaniak_2013
33 TSURUTA_2015 The requirement of environmental acidification for Ibaraki virus infection to host cells TSURUTA, Yuya; SHIBUTANI, Shusaku T.; WATANABE, Rie; IWATA, Hiroyuki 2015 2015-08-28 NONCOMM N PMC4751137 26321298.0 10.1292/jvms.15-0222 xvzhb7ix 0.381732 Compton_2014, Greene_2012
34 Hilimire_2015 N-Methylation as a Strategy for Enhancing the Affinity and Selectivity of RNA-binding Peptides: Application to the HIV-1 Frameshift-Stimulating RNA Hilimire, Thomas\nA.; Bennett, Ryan P.; Stewart, Ryan A.; Garcia-Miranda, Pablo; Blume, Alex; Becker, Jordan; Sherer, Nathan; Helms, Eric D.; Butcher, Samuel E.; Smith, Harold C.; Miller, Benjamin L. 2015 2015-10-23 None N PMC4720131 26496521.0 10.1021/acschembio.5b00682 rx90f66k 0.381358
35 Ashfaq_2011 Lysosomotropic agents as HCV entry inhibitors Ashfaq, Usman A; Javed, Tariq; Rehman, Sidra; Nawaz, Zafar; Riazuddin, Sheikh 2011 2011-04-12 COMM-USE N PMC3090357 21481279.0 10.1186/1743-422x-8-163 lcuma3eh 0.377480 Compton_2014, Greene_2012
36 Lemaitre_2005 Defining Drug Interactions with the Viral Membrane Protein Vpu from HIV-1 Lemaitre, V.; Kim, C. G.; Fischer, D.; Lam, Y. H.; Watts, A.; Fischer, W. B. 2005 2005-01-01 PMC N PMC7120575 10.1007/0-387-28146-0_14 eg35zyo6 0.370372 Greene_2012 Ma_G_2004, Guillén_2009
37 Li_Q_2006 Insulin Degrading Enzyme Is a Cellular Receptor Mediating Varicella-Zoster Virus Infection and Cell-to-Cell Spread Li, Qingxue; Ali, Mir A.; Cohen, Jeffrey I. 2006 2006-10-20 None N PMC7125743 17055432.0 10.1016/j.cell.2006.08.046 swfmcswh 0.369170 Compton_2014 Li_Q_2010, Mori_2011
38 Garcia_2006 Virological Synapse for Cell-Cell Spread of Viruses Garcia, Eduardo; Piguet, Vincent 2006 2006-01-01 PMC N PMC7121336 10.1007/978-0-387-46957-7_22 2zms2oyx 0.368675 Mori_2011
39 Zhang_2018 Transferrin receptor 1 is a supplementary receptor that assists transmissible gastroenteritis virus entry into porcine intestinal epithelium Zhang, Shuai; Hu, Weiwei; Yuan, Lvfeng; Yang, Qian 2018 2018-10-20 COMM-USE N PMC6196004 30342530.0 10.1186/s12964-018-0283-5 beb8k075 0.359092
40 Kang_2020 Inhibition of PIKfyve kinase prevents infection by EBOV and SARS-CoV-2 Yuan-Lin Kang; Yi-Ying Chou; Paul W Rothlauf; Zhuoming Liu; Silvia Piccinotti; Timothy K Soh; David Cureton; James Brett Case; Rita E Chen; Michael S Diamond; Sean P.J. Whelan; Tom Kirchhausen 2020 2020-04-21 BioRxiv Y 10.1101/2020.04.21.053058 uu883ofc 0.353244 Greene_2012, Compton_2014
41 Castilla_1996 Low-pH-induced fusion of Vero cells infected with Junin virus Castilla, V.; Mersich, S. E. 1996 1996-01-01 PMC N PMC7086872 8774689.0 10.1007/bf01718832 4k2aaab6 0.349548 Compton_2014 Castilla_1994, Pastey_2000, Mori_2011
42 Nishikawa_2008 Novel screening systems for HIV-1 fusion mediated by two extra-virion heptad repeats of gp41 Nishikawa, Hiroki; Kodama, Eiichi; Sakakibara, Ayako; Fukudome, Ayako; Izumi, Kazuki; Oishi, Shinya; Fujii, Nobutaka; Matsuoka, Masao 2008 2008-10-31 PMC N PMC7114109 18584890.0 10.1016/j.antiviral.2008.05.006 nh4gf1p2 0.345226 Veiga_2006
43 Millet_2016 Middle East respiratory syndrome coronavirus infection is inhibited by griffithsin Millet, Jean K.; Séron, Karin; Labitt, Rachael N.; Danneels, Adeline; Palmer, Kenneth E.; Whittaker, Gary R.; Dubuisson, Jean; Belouzard, Sandrine 2016 2016-09-30 PMC N PMC7113895 27424494.0 10.1016/j.antiviral.2016.07.011 x2q9vyf2 0.343410 Compton_2014
44 Plegge_2016 Evidence that Processing of the Severe Fever with Thrombocytopenia Syndrome Virus Gn/Gc Polyprotein Is Critical for Viral Infectivity and Requires an Internal Gc Signal Peptide Plegge, Teresa; Hofmann-Winkler, Heike; Spiegel, Martin; Pöhlmann, Stefan 2016 2016-11-17 COMM-USE N PMC5113920 27855227.0 10.1371/journal.pone.0166013 yl1604bj 0.339245 Compton_2014
45 Lee_W_2018 IFITM proteins inhibit HIV-1 protein synthesis Lee, Wing-Yiu Jason; Fu, Rebecca Menhua; Liang, Chen; Sloan, Richard D. 2018 2018-09-28 COMM-USE N PMC6162285 30266929.0 10.1038/s41598-018-32785-5 pgxzeu2x 0.325113 Chutiwitoonchai_2013, Yu_J_2015, Compton_2014
46 Adachi_2007 Inhibition of betanodavirus infection by inhibitors of endosomal acidification Adachi, K.; Ichinose, T.; Takizawa, N.; Watanabe, K.; Kitazato, K.; Kobayashi, N. 2007 2007-09-22 PMC N PMC7086734 17891330.0 10.1007/s00705-007-1061-7 klx95l1j 0.325076 Compton_2014
47 Compton_2014 IFITM Proteins Incorporated into HIV-1 Virions Impair Viral Fusion and Spread Compton, Alex A.; Bruel, Timothée; Porrot, Françoise; Mallet, Adeline; Sachse, Martin; Euvrard, Marine; Liang, Chen; Casartelli, Nicoletta; Schwartz, Olivier 2014 2014-12-10 None N PMC7104936 25464829.0 10.1016/j.chom.2014.11.001 hyh2l51z 0.314186 Yu_J_2015 Yu_J_2015, Tartour_2014, Lee_W_2018
48 Santos_2008 Oropouche virus entry into HeLa cells involves clathrin and requires endosomal acidification Santos, Rodrigo I.M.; Rodrigues, Alcir H.; Silva, Maria Lúcia; Mortara, Renato A.; Rossi, Marcos A.; Jamur, Maria Célia; Oliver, Constance; Arruda, Eurico 2008 2008-12-31 PMC N PMC7114418 18840482.0 10.1016/j.virusres.2008.08.016 48ol3y8d 0.311325 Greene_2012, Rowe_2008 Regan_2013, Krzyzaniak_2013, Nitschke_2008
49 Li_D_1992 Coronavirus IBV-induced membrane fusion occurs at near-neutral pH Li, D.; Cavanagh, D. 1992 1992-01-01 PMC N PMC7086749 1309994.0 10.1007/bf01317192 0bzbywj2 0.309915 Compton_2014 Payne_1990
50 Salata_2015 Amiodarone and metabolite MDEA inhibit Ebola virus infection by interfering with the viral entry process Salata, Cristiano; Baritussio, Aldo; Munegato, Denis; Calistri, Arianna; Ha, Huy Riem; Bigler, Laurent; Fabris, Fabrizio; Parolin, Cristina; Palù, Giorgio; Mirazimi, Ali 2015 2015-05-01 PMC N PMC7108539 25933611.0 10.1093/femspd/ftv032 zm2wfnrv 0.304297 Compton_2014