Topic 12 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 12 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Li_Z_2018 Cellular hnRNP A1 Interacts with Nucleocapsid Protein of Porcine Epidemic Diarrhea Virus and Impairs Viral Replication Li, Zhonghua; Zeng, Wei; Ye, Shiyi; Lv, Jian; Nie, Axiu; Zhang, Bingzhou; Sun, Yumei; Han, Heyou; He, Qigai 2018 2018-03-13 COMM-USE N PMC5869520 29534017.0 10.3390/v10030127 prgorr3d 0.907578 Shi_S_2000, Volmer_2010, Li_C_2013, Yasuda-Inoue_2013 Zhang_2015
2 Zhang_2014 EF1A interacting with nucleocapsid protein of transmissible gastroenteritis coronavirus and plays a role in virus replication Zhang, Xin; Shi, Hongyan; Chen, Jianfei; Shi, Da; Li, Changlong; Feng, Li 2014 2014-08-27 PMC N PMC7117464 24974120.0 10.1016/j.vetmic.2014.05.034 lrzshhjd 0.873350 Li_C_2013, Li_C_2014 Zhang_2015
3 Zhao_2015 The DEAD-box RNA helicase 5 positively regulates the replication of porcine reproductive and respiratory syndrome virus by interacting with viral Nsp9 in vitro Zhao, Shuangcheng; Ge, Xinna; Wang, Xiaolong; Liu, Aijing; Guo, Xin; Zhou, Lei; Yu, Kangzhen; Yang, Hanchun 2015 2015-01-02 PMC N PMC7114378 25449571.0 10.1016/j.virusres.2014.10.021 syh53l6q 0.831128 Yasuda-Inoue_2013, Li_C_2013, Liu_H_2009
4 Luo_H_2005 The nucleocapsid protein of SARS coronavirus has a high binding affinity to the human cellular heterogeneous nuclear ribonucleoprotein A1 Luo, Haibin; Chen, Qing; Chen, Jing; Chen, Kaixian; Shen, Xu; Jiang, Hualiang 2005 2005-05-09 PMC N PMC7094256 15862300.0 10.1016/j.febslet.2005.03.080 cxv3m4u1 0.804910 Shi_S_2000, Volmer_2010, Yasuda-Inoue_2013
5 Song_2019 EIF4A2 interacts with the membrane protein of transmissible gastroenteritis coronavirus and plays a role in virus replication Song, Zhenhui; Yang, Yang; Wang, Li; Wang, Kai; Ran, Ling; Xie, Yilu; Huang, LeiShi; Yang, Zhou; Yuan, Peng; Yu, Qiuhan 2019 2019-04-30 PMC N PMC7111847 30583231.0 10.1016/j.rvsc.2018.12.005 sd5izamc 0.767673 Volmer_2010, Li_C_2013, Li_C_2014 Zhang_2015
6 Li_S_2015 eEF1A Interacts with the NS5A Protein and Inhibits the Growth of Classical Swine Fever Virus Li, Su; Feng, Shuo; Wang, Jing-Han; He, Wen-Rui; Qin, Hua-Yang; Dong, Hong; Li, Lian-Feng; Yu, Shao-Xiong; Li, Yongfeng; Qiu, Hua-Ji 2015 2015-08-10 COMM-USE N PMC4576194 26266418.0 10.3390/v7082833 iv2dcpqj 0.755303 Yasuda-Inoue_2013, Stork_2011 Yan_J_2020
7 Sharma_2014 Influenza A viral nucleoprotein interacts with cytoskeleton scaffolding protein α‐actinin‐4 for viral replication Sharma, Shipra; Mayank, Adarsh K.; Nailwal, Himani; Tripathi, Shashank; Patel, Jenish R.; Bowzard, John B.; Gaur, Pratibha; Donis, Ruben O.; Katz, Jacqueline M.; Cox, Nancy J.; Lal, Renu B.; Farooqi, Humaira; Sambhara, Suryaprakash; Lal, Sunil K. 2014 2014-06-02 PMC N PMC7164065 24802111.0 10.1111/febs.12828 ql6bdnkw 0.724015 Volmer_2010, Li_C_2013
8 Li_C_2013 The DEAD-box RNA helicase DDX5 acts as a positive regulator of Japanese encephalitis virus replication by binding to viral 3′ UTR Li, Chen; Ge, Ling-ling; Li, Peng-peng; Wang, Yue; Sun, Ming-xia; Huang, Li; Ishag, Hassan; Di, Dong-dong; Shen, Zhi-qiang; Fan, Wei-xing; Mao, Xiang 2013 2013-11-30 PMC N PMC7113685 24035833.0 10.1016/j.antiviral.2013.09.002 1cy15tny 0.699228 Yasuda-Inoue_2013, Li_C_2014, Liu_H_2009 Yasuda-Inoue_2013, Li_C_2014
9 zhao_2018 Host protein CD63 enhances viral RNA replication by interacting with human astrovirus nonstructural protein nsP1a/4 wei zhao; Nian liu; Xiao Li Tao; Chun hong Zheng; Xiang yu Li; Man Yu; Yong gang Li 2018 2018-05-27 BioRxiv N 10.1101/331835 8r1zb4oc 0.673747 Volmer_2010, Li_C_2013, Li_C_2014 Zhang_2015
10 Xue_Q_2019 The DEAD-Box RNA Helicase DDX1 Interacts with the Viral Protein 3D and Inhibits Foot-and-Mouth Disease Virus Replication Xue, Qiao; Liu, Huisheng; Zeng, Qiaoying; Zheng, Haixue; Xue, Qinghong; Cai, Xuepeng 2019 2019-07-29 PMC N PMC6888807 31359346.0 10.1007/s12250-019-00148-7 9pw9191b 0.656068 Li_C_2013, Yasuda-Inoue_2013, Li_C_2014 Li_C_2013, Yasuda-Inoue_2013
11 Gao_W_2010 Identification of NCAM that interacts with the PHE-CoV spike protein Gao, Wei; He, Wenqi; Zhao, Kui; Lu, Huijun; Ren, Wenzhi; Du, Chongtao; Chen, Keyan; Lan, Yungang; Song, Deguang; Gao, Feng 2010 2010-09-24 COMM-USE N PMC2955716 20863409.0 10.1186/1743-422x-7-254 ss1upwwo 0.590814 Trobaugh_2017, Volmer_2010 Zhang_2015
12 Gao_X_2010 Tudor-SN interacts with and co-localizes with G3BP in stress granules under stress conditions Gao, Xingjie; Ge, Lin; Shao, Jie; Su, Chao; Zhao, Hong; Saarikettu, Juha; Yao, Xuyang; Yao, Zhi; Silvennoinen, Olli; Yang, Jie 2010 2010-08-20 PMC N PMC7127458 20643132.0 10.1016/j.febslet.2010.07.022 2inmn7lb 0.580357 Yasuda-Inoue_2013, Volmer_2010 Fitzgerald_2013, Aulas_2015, Jayabalan_2019
13 Li_C_2014 Cellular DDX3 regulates Japanese encephalitis virus replication by interacting with viral un-translated regions Li, Chen; Ge, Ling-ling; Li, Peng-peng; Wang, Yue; Dai, Juan-juan; Sun, Ming-xia; Huang, Li; Shen, Zhi-qiang; Hu, Xiao-chun; Ishag, Hassan; Mao, Xiang 2014 2014-01-20 PMC N PMC7111930 24418539.0 10.1016/j.virol.2013.11.008 wwkdum94 0.569757 Yasuda-Inoue_2013, Li_C_2013 Li_C_2013
14 Kaewborisuth_2019 Porcine Epidemic Diarrhea Virus (PEDV) ORF3 Interactome Reveals Inhibition of Virus Replication by Cellular VPS36 Protein Kaewborisuth, Challika; Yingchutrakul, Yodying; Roytrakul, Sittiruk; Jongkaewwattana, Anan 2019 2019-04-24 COMM-USE N PMC6521123 31022991.0 10.3390/v11040382 uabg37n0 0.530559 Volmer_2010, Trobaugh_2017 zhao_2018
15 Trincone_2015 Looking for a needle in a haystack: Cellular proteins that may interact with the tyrosine-based sorting signal of the TGEV S protein Trincone, Anna; Schwegmann-Weßels, Christel 2015 2015-04-16 PMC N PMC7114463 25481285.0 10.1016/j.virusres.2014.11.029 elway9lp 0.526017 Volmer_2010, Wodrich_2010, Li_C_2014 Zhang_2015
16 Yan_J_2020 Involvement of VCP/UFD1/Nucleolin in the viral entry of Enterovirus A species Yan, Jingjing; Wang, Meng; Wang, Min; Dun, Ying; Zhu, Liuyao; Yi, Zhigang; Zhang, Shuye 2020 2020-07-02 PMC N 10.1016/j.virusres.2020.197974 lqu8wm88 0.519964 Yasuda-Inoue_2013 Phongphaew_2017, Sun_D_2016
17 Chen_2009 Interaction between SARS-CoV helicase and a multifunctional cellular protein (Ddx5) revealed by yeast and mammalian cell two-hybrid systems Chen, Jin-Yan; Chen, Wan-Nan; Poon, Kwok-Man Vincent; Zheng, Bo-Jian; Lin, Xu; Wang, Yong-Xiang; Wen, Yu-Mei 2009 2009-02-18 PMC N PMC7087151 19224332.0 10.1007/s00705-009-0323-y 238e30ii 0.518315 Li_C_2013, Yasuda-Inoue_2013, Li_C_2014
18 Kwak_2011 Annexin A2 Binds RNA and Reduces the Frameshifting Efficiency of Infectious Bronchitis Virus Kwak, Hoyun; Park, Min Woo; Jeong, Sunjoo 2011 2011-08-30 COMM-USE N PMC3168876 21918681.0 10.1371/journal.pone.0024067 uqrwq5qk 0.489446 Yasuda-Inoue_2013, Stork_2011, Liu_H_2009 Zhang_2015
19 Sungsuwan_2020 Nucleocapsid proteins from other swine enteric coronaviruses differentially modulate PEDV replication Sungsuwan, Suttipun; Jongkaewwattana, Anan; Jaru-Ampornpan, Peera 2020 2020-01-15 PMC N PMC7112109 31756532.0 10.1016/j.virol.2019.11.007 lkd2mj27 0.487595 Zhang_2015
20 Jiang_2009 Polypyrimidine tract-binding protein influences negative strand RNA synthesis of dengue virus Jiang, Linbin; Yao, Huiling; Duan, Xiaoqun; Lu, Xi; Liu, Yongming 2009 2009-07-24 PMC N PMC7117538 19450550.0 10.1016/j.bbrc.2009.05.036 0pq2vgwo 0.475155 Li_C_2014, Yasuda-Inoue_2013 Zhang_2015
21 Zhang_2015 Identification of the interaction between vimentin and nucleocapsid protein of transmissible gastroenteritis virus Zhang, Xin; Shi, HongYan; Chen, JianFei; Shi, Da; Dong, Hui; Feng, Li 2015 2015-03-16 PMC N PMC7114421 25533531.0 10.1016/j.virusres.2014.12.013 wrztpeb8 0.467284 Volmer_2010, Shi_S_2005, Trobaugh_2017 Sun_D_2016
22 Guan_2010 Interaction of Hsp40 with influenza virus M2 protein: implications for PKR signaling pathway Guan, Zhenhong; Liu, Di; Mi, Shuofu; Zhang, Jie; Ye, Qinong; Wang, Ming; Gao, George F.; Yan, Jinghua 2010 2010-10-01 PMC N PMC4875119 21204021.0 10.1007/s13238-010-0115-x 8x83dx6k 0.452342 Volmer_2010 Zhang_2015, Aweya_2013
23 Shi_S_2000 Heterogeneous nuclear ribonucleoprotein A1 regulates RNA synthesis of a cytoplasmic virus Shi, Stephanie T.; Huang, Peiyong; Li, Hsin-Pai; Lai, Michael M.C. 2000 2000-09-01 PMC N PMC302072 10970862.0 10.1093/emboj/19.17.4701 6lvn10f4 0.451971 Yasuda-Inoue_2013, Stork_2011
24 Tan_Y_2012 Binding of the 5′-untranslated region of coronavirus RNA to zinc finger CCHC-type and RNA-binding motif 1 enhances viral replication and transcription Tan, Yong Wah; Hong, Wanjin; Liu, Ding Xiang 2012 2012-02-22 NONCOMM N PMC3367200 22362731.0 10.1093/nar/gks165 d1sgnxc0 0.432311 Stork_2011, Volmer_2010
25 Wang_2010 Interactions of SARS Coronavirus Nucleocapsid Protein with the host cell proteasome subunit p42 Wang, Qin; Li, Chuan; Zhang, Quanfu; Wang, Tao; Li, Jiandong; Guan, Wuxiang; Yu, Jianshi; Liang, Mifang; Li, Dexin 2010 2010-05-17 COMM-USE N PMC2894783 20478047.0 10.1186/1743-422x-7-99 al8irm9i 0.425741 Volmer_2010 Zhang_2015
26 Lai_M_2015 DDX3 functions in antiviral innate immunity through translational control of PACT Lai, Ming‐Chih; Sun, H. Sunny; Wang, Shainn‐Wei; Tarn, Woan‐Yuh 2015 2015-10-31 PMC N PMC7164078 26454002.0 10.1111/febs.13553 ploi4wh2 0.418019 Yasuda-Inoue_2013
27 Wendt_2020 The Ebola Virus Nucleoprotein Recruits the Nuclear RNA Export Factor NXF1 into Inclusion Bodies to Facilitate Viral Protein Expression Wendt, Lisa; Brandt, Janine; Bodmer, Bianca S.; Reiche, Sven; Schmidt, Marie Luisa; Traeger, Shelby; Hoenen, Thomas 2020 2020-01-11 COMM-USE N PMC7017048 31940815.0 10.3390/cells9010187 fbw99knd 0.412709 Yasuda-Inoue_2013, Li_C_2014, Stork_2011, Volmer_2010 Wulan_2015, Yan_J_2020
28 Carissimo_2019 VCP/p97 Is a Proviral Host Factor for Replication of Chikungunya Virus and Other Alphaviruses Carissimo, Guillaume; Chan, Yi-Hao; Utt, Age; Chua, Tze-Kwang; Bakar, Farhana Abu; Merits, Andres; Ng, Lisa F. P. 2019 2019-09-24 COMM-USE N PMC6787436 31636613.0 10.3389/fmicb.2019.02236 jj18fyaj 0.346970 Li_C_2014 Yan_J_2020, Sun_D_2016, Phongphaew_2017
29 Pan_W_2017 EIF3i affects vesicular stomatitis virus growth by interacting with matrix protein Pan, Wei; Song, Deguang; He, Wenqi; Lu, Huijun; Lan, Yungang; Li, Hongli; Gao, Feng; Zhao, Kui 2017 2017-12-31 PMC N PMC7117458 29173589.0 10.1016/j.vetmic.2017.10.021 9t8hf89d 0.341961 Trobaugh_2017, Volmer_2010, Yasuda-Inoue_2013 Zhang_2015
30 Aweya_2013 The p7 protein of the hepatitis C virus induces cell death differently from the influenza A virus viroporin M2 Aweya, Jude Juventus; Mak, Tze Minn; Lim, Seng Gee; Tan, Yee-Joo 2013 2013-03-31 PMC N PMC7114515 23246447.0 10.1016/j.virusres.2012.12.005 5wiyjvrc 0.340199 Volmer_2010, Aweya_2015 Zhang_2015
31 Cheng_2015 Severe acute respiratory syndrome coronavirus protein 6 mediates ubiquitin-dependent proteosomal degradation of N-Myc (and STAT) interactor Cheng, Weijia; Chen, Shiyou; Li, Ruiling; Chen, Yu; Wang, Min; Guo, Deyin 2015 2015-04-17 PMC N PMC7091177 25907116.0 10.1007/s12250-015-3581-8 8g6pcfvo 0.335197
32 Kou_Y_2006 Hepatitis C virus NS4A inhibits cap-dependent and the viral IRES-mediated translation through interacting with eukaryotic elongation factor 1A Kou, Yi-Hen; Chou, Shang-Min; Wang, Yi-Ming; Chang, Ya-Tzu; Huang, Shao-Yong; Jung, Mei-Ying; Huang, Yu-Hsu; Chen, Mei-Ru; Chang, Ming-Fu; Chang, Shin C. 2006 2006-08-23 PMC N PMC7088589 16927014.0 10.1007/s11373-006-9104-8 u2lwgyyf 0.319362 Yasuda-Inoue_2013, Stork_2011
33 Brunner_2010 Delayed kinetics of poliovirus RNA synthesis in a human cell line with reduced levels of hnRNP C proteins Brunner, Jo Ellen; Ertel, Kenneth J.; Rozovics, Janet M.; Semler, Bert L. 2010 2010-05-10 None N PMC2844484 20189623.0 10.1016/j.virol.2010.01.031 0eqauqje 0.310476 Shi_S_2000, Volmer_2010, Yasuda-Inoue_2013, Liu_H_2009 Shi_S_2000
34 Shi_D_2014 Molecular Characterizations of Subcellular Localization Signals in the Nucleocapsid Protein of Porcine Epidemic Diarrhea Virus Shi, Da; Lv, Maojie; Chen, Jianfei; Shi, Hongyan; Zhang, Sha; Zhang, Xin; Feng, Li 2014 2014-03-13 COMM-USE N PMC3970149 24632575.0 10.3390/v6031253 mameyzih 0.303485 Volmer_2010, Shi_S_2000, Li_C_2013 Zhang_2015