Topic 05 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 12 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Stoecklin_2012 Relationship of GW/P-Bodies with Stress Granules Stoecklin, Georg; Kedersha, Nancy 2012 2012-11-02 PMC N PMC4317337 23224972.0 10.1007/978-1-4614-5107-5_12 z6alrae1 0.848440 Dubois_2016, Hurley_2014, Emmott_2009 Kedersha_2009, Thomas_2011
2 Palangi_2017 Effects of oxidative and thermal stresses on stress granule formation in human induced pluripotent stem cells Palangi, Freshteh; Samuel, Samson M.; Thompson, I. Richard; Triggle, Chris R.; Emara, Mohamed M. 2017 2017-07-26 COMM-USE N PMC5528897 28746394.0 10.1371/journal.pone.0182059 riwplymp 0.803097 Stoecklin_2012, Haasnoot_2010, Volmer_2010, Trobaugh_2017
3 Mollet_2008 Translationally Repressed mRNA Transiently Cycles through Stress Granules during Stress Mollet, Stephanie; Cougot, Nicolas; Wilczynska, Ania; Dautry, François; Kress, Michel; Bertrand, Edouard; Weil, Dominique 2008 2008-10-01 PMC N PMC2555929 18632980.0 10.1091/mbc.e08-05-0499 rdb4xpyc 0.768600 Stoecklin_2012, Dubois_2016, Volmer_2010 Stoecklin_2012
4 Ivanova_2015 Alu RNA regulates the cellular pool of active ribosomes by targeted delivery of SRP9/14 to 40S subunits Ivanova, Elena; Berger, Audrey; Scherrer, Anne; Alkalaeva, Elena; Strub, Katharina 2015 2015-03-11 None N PMC4357698 25697503.0 10.1093/nar/gkv048 64cnoqpi 0.739019 Yasuda-Inoue_2013, Stork_2011, Masaki_2015 Sasvari_2011
5 Alam_2019 Rasputin a decade on and more promiscuous than ever? A review of G3BPs Alam, Umber; Kennedy, Derek 2019 2019-03-31 PMC N PMC7114234 30595162.0 10.1016/j.bbamcr.2018.09.001 4uyodkt8 0.683023 Haasnoot_2010, Trobaugh_2017, Berkhout_2006, Shi_J_2012 Zhang_2015, Sun_D_2016
6 Poblete-Durán_2016 Who Regulates Whom? An Overview of RNA Granules and Viral Infections Poblete-Durán, Natalia; Prades-Pérez, Yara; Vera-Otarola, Jorge; Soto-Rifo, Ricardo; Valiente-Echeverría, Fernando 2016 2016-06-28 COMM-USE N PMC4974515 27367717.0 10.3390/v8070180 w4puwpat 0.681049 Herbert_2016, den_Boon_2010, Tsai_2014, Yasuda-Inoue_2013, Trobaugh_2017 Montero_2011, Tsai_2014, Zhang_2019
7 Aulas_2015 Alterations in stress granule dynamics driven by TDP-43 and FUS: a link to pathological inclusions in ALS? Aulas, Anaïs; Vande Velde, Christine 2015 2015-10-23 COMM-USE N PMC4615823 26557057.0 10.3389/fncel.2015.00423 vrnonccy 0.678539 Haasnoot_2010, Emmott_2009, Stoecklin_2012, Trobaugh_2017 Monahan_2016
8 Thomas_2011 RNA granules: The good, the bad and the ugly Thomas, María Gabriela; Loschi, Mariela; Desbats, María Andrea; Boccaccio, Graciela Lidia 2011 2011-02-28 None N PMC3001194 20813183.0 10.1016/j.cellsig.2010.08.011 fxvwxkd2 0.673235 Stoecklin_2012, Hurley_2014, Dubois_2016, Tsai_2014 Stoecklin_2012, Zhang_2019
9 Wang_2014 Switch from Cap- to Factorless IRES-Dependent 0 and +1 Frame Translation during Cellular Stress and Dicistrovirus Infection Wang, Qing S.; Jan, Eric 2014 2014-08-04 COMM-USE N PMC4121135 25089704.0 10.1371/journal.pone.0103601 0if5z3xp 0.669379 Ivanova_2015 Sasvari_2011
10 Brownsword_2019 Infectious bronchitis virus regulates cellular stress granule signaling Matthew J. Brownsword; Nicole Doyle; Michèle Brocard; Nicolas Locker; Helena J. Maier 2019 2019-10-28 BioRxiv N 10.1101/819482 ak7hbwr7 0.642715 Trobaugh_2017, Berkhout_2006, Gaucherand_2019, Herbert_2016, Klein_2011 Lutz_2019
11 Lloyd_2013 Regulation of Stress Granules and P-Bodies During RNA Virus Infection Lloyd, Richard E. 2013 2013-04-03 None N PMC3652661 23554219.0 10.1002/wrna.1162 fmkcvhkh 0.642697 den_Boon_2010, Yasuda-Inoue_2013, Tsai_2014, Trobaugh_2017, Herbert_2016 Tsai_2014, Zhang_2019, Reineke_2013
12 Gilbertson_2018 Changes in mRNA abundance drive shuttling of RNA binding proteins, linking cytoplasmic RNA degradation to transcription Gilbertson, Sarah; Federspiel, Joel D; Hartenian, Ella; Cristea, Ileana M; Glaunsinger, Britt 2018 2018-10-03 COMM-USE N PMC6203436 30281021.0 10.7554/elife.37663 cv7rrjxe 0.625725 Trobaugh_2017, Abernathy_2015, Ivanova_2015 Shi_S_2000
13 Drummond_2011 Diauxic shift-dependent relocalization of decapping activators Dhh1 and Pat1 to polysomal complexes Drummond, Sheona P.; Hildyard, John; Firczuk, Helena; Reamtong, Onrapak; Li, Ning; Kannambath, Shichina; Claydon, Amy J.; Beynon, Robert J.; Eyers, Claire E.; McCarthy, John E. G. 2011 2011-06-28 NONCOMM N PMC3177209 21712243.0 10.1093/nar/gkr474 1jdcdwxo 0.625677 Yasuda-Inoue_2013, Ivanova_2015, Dubois_2016 Sasvari_2011, Li_Z_2009
14 Fitzgerald_2013 Poliovirus infection induces the co-localization of cellular protein SRp20 with TIA-1, a cytoplasmic stress granule protein Fitzgerald, Kerry D.; Semler, Bert L. 2013 2013-09-30 None N PMC3742715 23830997.0 10.1016/j.virusres.2013.06.012 x1hisc0s 0.619026 Volmer_2010, Stoecklin_2012, Trobaugh_2017, Dubois_2016, Yasuda-Inoue_2013
15 Tsai_2014 Cytoplasmic RNA Granules and Viral Infection Tsai, Wei-Chih; Lloyd, Richard E. 2014 2014-11-03 PMC N PMC4867093 26958719.0 10.1146/annurev-virology-031413-085505 mbsemrty 0.608866 Yasuda-Inoue_2013, Trobaugh_2017, den_Boon_2010, Herbert_2016 Zhang_2019, Lloyd_2013, Reineke_2013
16 Abernathy_2015 Viral Nucleases Induce an mRNA Degradation-Transcription Feedback Loop in Mammalian Cells Abernathy, Emma; Gilbertson, Sarah; Alla, Ravi; Glaunsinger, Britt 2015 2015-08-12 None N PMC4538998 26211836.0 10.1016/j.chom.2015.06.019 rybce5bj 0.602942 Ivanova_2015, Yasuda-Inoue_2013 Hartenian_2019, Shi_S_2000
17 Reineke_2013 Diversion of stress granules and P-bodies during viral infection Reineke, Lucas C.; Lloyd, Richard E. 2013 2013-02-20 PMC N PMC3611887 23290869.0 10.1016/j.virol.2012.11.017 o24zvqj5 0.602488 den_Boon_2010, Trobaugh_2017, Herbert_2016, Tsai_2014 Lloyd_2013, Tsai_2014, Zhang_2019
18 Hartenian_2019 Herpesvirus infection reduces Pol II occupancy of host promoters but spares viral promoters Ella N Hartenian; Britt A Glaunsinger 2019 2019-03-26 BioRxiv N 10.1101/585984 i51almnu 0.599286 Yasuda-Inoue_2013 Abernathy_2015
19 Covarrubias_2011 Coordinated Destruction of Cellular Messages in Translation Complexes by the Gammaherpesvirus Host Shutoff Factor and the Mammalian Exonuclease Xrn1 Covarrubias, Sergio; Gaglia, Marta M.; Kumar, G. Renuka; Wong, Wesley; Jackson, Andrew O.; Glaunsinger, Britt A. 2011 2011-10-27 COMM-USE N PMC3203186 22046136.0 10.1371/journal.ppat.1002339 8aybjsq6 0.599214 Yasuda-Inoue_2013, Ivanova_2015, Abernathy_2015 Sasvari_2011, Abernathy_2015
20 Ohn_T_2010 The role of posttranslational modifications in the assembly of stress granules Ohn, Takbum; Anderson, Paul 2010 2010-06-14 PMC N PMC7169689 21956944.0 10.1002/wrna.23 aohmw1ol 0.595562 Trobaugh_2017, Yasuda-Inoue_2013, Hurley_2014, Dubois_2016
21 Kedersha_2009 Chapter 4 Regulation of Translation by Stress Granules and Processing Bodies Kedersha, Nancy; Anderson, Paul 2009 2009-12-31 PMC N PMC7102815 20374741.0 10.1016/s1877-1173(09)90004-7 8vrcwwll 0.589867 Stoecklin_2012, Dubois_2016, Hurley_2014, Emmott_2009, Brown_2008 Stoecklin_2012, Thomas_2011
22 Abernathy_2015 Emerging roles for RNA degradation in viral replication and antiviral defense Abernathy, Emma; Glaunsinger, Britt 2015 2015-05-31 PMC N PMC4424162 25721579.0 10.1016/j.virol.2015.02.007 dkwcheu0 0.583177 Trobaugh_2017, Herbert_2016, Haasnoot_2010, Berkhout_2006 Gaucherand_2019, Chemudupati_2019, Masaki_2015
23 Guerrero_2015 HIV-1 Replication and the Cellular Eukaryotic Translation Apparatus Guerrero, Santiago; Batisse, Julien; Libre, Camille; Bernacchi, Serena; Marquet, Roland; Paillart, Jean-Christophe 2015 2015-01-19 COMM-USE N PMC4306834 25606970.0 10.3390/v7010199 yozk08w4 0.579650 Yasuda-Inoue_2013, Trobaugh_2017, Stork_2011 de_Breyne_2018, Sasvari_2011
24 Kozak_1986 Regulation of Protein Synthesis in Virus-Infected Animal Cells Kozak, Marilyn 1986 1986-12-31 PMC N PMC7131717 3019107.0 10.1016/s0065-3527(08)60265-1 oetrdm8g 0.578927 Trobaugh_2017, Moon_2012, Haasnoot_2010, Abernathy_2015 de_Breyne_2018, Roberts_2009
25 Zhang_2019 Viral Regulation of RNA Granules in Infected Cells Zhang, Qiang; Sharma, Nishi R.; Zheng, Zhi-Ming; Chen, Mingzhou 2019 2019-04-29 COMM-USE N PMC6513825 31037644.0 10.1007/s12250-019-00122-3 9jgg8ukr 0.564911 Herbert_2016, Trobaugh_2017, den_Boon_2010, Berkhout_2006, Tsai_2014 Tsai_2014, Wulan_2015
26 Perez-Pepe_2012 BUHO: A MATLAB Script for the Study of Stress Granules and Processing Bodies by High-Throughput Image Analysis Perez-Pepe, Marcelo; Slomiansky, Victoria; Loschi, Mariela; Luchelli, Luciana; Neme, Maximiliano; Thomas, María Gabriela; Boccaccio, Graciela Lidia 2012 2012-12-20 COMM-USE N PMC3527446 23284702.0 10.1371/journal.pone.0051495 rdpsxb4n 0.558411 Volmer_2010, Stoecklin_2012, Dubois_2016, Emmott_2009, Moon_2012 Thomas_2011, Stoecklin_2012
27 Gaete-Argel_2019 Strategies for Success. Viral Infections and Membraneless Organelles Gaete-Argel, Aracelly; Márquez, Chantal L.; Barriga, Gonzalo P.; Soto-Rifo, Ricardo; Valiente-Echeverría, Fernando 2019 2019-10-11 COMM-USE N PMC6797609 31681621.0 10.3389/fcimb.2019.00336 3xof6e7g 0.534526 Trobaugh_2017, Herbert_2016, Yasuda-Inoue_2013, Haasnoot_2010, Moon_2012 Zhang_2019, Diaz_2012, Neufeldt_2016, Wulan_2015
28 White_2012 Regulation of stress granules in virus systems White, James P.; Lloyd, Richard E. 2012 2012-04-30 None N PMC3322245 22405519.0 10.1016/j.tim.2012.02.001 v9xo446h 0.526060 Trobaugh_2017, Herbert_2016, den_Boon_2010, Berkhout_2006 Miller_2011, Tsai_2014, Zhang_2019
29 Miller_2011 Stress Granules and Virus Replication Miller, Cathy L. 2011 2011-11-01 PMC N PMC4574952 26388931.0 10.2217/fvl.11.108 pzuff2al 0.517722 Trobaugh_2017, Yasuda-Inoue_2013, Ivanova_2015 Montero_2011
30 Lai_M_2009 Functional interplay between viral and cellular SR proteins in control of post‐transcriptional gene regulation Lai, Ming‐Chih; Peng, Tsui‐Yi; Tarn, Woan‐Yuh 2009 2009-02-10 PMC N PMC7164074 19220464.0 10.1111/j.1742-4658.2009.06894.x llngs3v5 0.517045 Trobaugh_2017, Herbert_2016, Haasnoot_2010, Abernathy_2015, Yasuda-Inoue_2013
31 Raaben_2007 Mouse hepatitis coronavirus replication induces host translational shutoff and mRNA decay, with concomitant formation of stress granules and processing bodies Raaben, Matthijs; Groot Koerkamp, Marian J. A.; Rottier, Peter J. M.; De Haan, Cornelis A. M. 2007 2007-04-13 PMC N PMC7162177 17490409.0 10.1111/j.1462-5822.2007.00951.x tgp51aos 0.511496 Trobaugh_2017, Herbert_2016, Yasuda-Inoue_2013, Berkhout_2006
32 Li_M_2015 To translate, or not to translate: viral and host mRNA regulation by interferon-stimulated genes Li, Melody M.H.; MacDonald, Margaret R.; Rice, Charles M. 2015 2015-06-30 None N PMC4441850 25748385.0 10.1016/j.tcb.2015.02.001 tdmkph8r 0.509961 Trobaugh_2017, Herbert_2016, Haasnoot_2010, Berkhout_2006, Abernathy_2015 de_Breyne_2018, Sasvari_2011
33 Onomoto_2014 Antiviral innate immunity and stress granule responses Onomoto, Koji; Yoneyama, Mitsutoshi; Fung, Gabriel; Kato, Hiroki; Fujita, Takashi 2014 2014-09-30 PMC N 25153707.0 10.1016/j.it.2014.07.006 o3ipzn05 0.503158 Berkhout_2006, Mao_J_2019, Shi_J_2012
34 López‐Lastra_2010 Translation initiation of viral mRNAs López‐Lastra, Marcelo; Ramdohr, Pablo; Letelier, Alejandro; Vallejos, Maricarmen; Vera‐Otarola, Jorge; Valiente‐Echeverría, Fernando 2010 2010-04-26 PMC N PMC7169124 20440748.0 10.1002/rmv.649 mycpozhk 0.497494 Trobaugh_2017, Berkhout_2006, Herbert_2016, Abernathy_2015, Moon_2012
35 Dickson_2011 Strategies for viral RNA stability: live long and prosper Dickson, Alexa M.; Wilusz, Jeffrey 2011 2011-07-31 None N PMC3123725 21640425.0 10.1016/j.tig.2011.04.003 7nyo34vq 0.490993 Trobaugh_2017, Herbert_2016, Berkhout_2006 Diaz_2012, Sun_D_2016
36 Hyde_2015 Innate immune restriction and antagonism of viral RNA lacking 2׳-O methylation Hyde, Jennifer L.; Diamond, Michael S. 2015 2015-05-31 PMC N PMC4424151 25682435.0 10.1016/j.virol.2015.01.019 sa3fms13 0.489192 Yasuda-Inoue_2013, Trobaugh_2017, Herbert_2016, Stork_2011
37 Monahan_2016 Stress granules at the intersection of autophagy and ALS Monahan, Zachary; Shewmaker, Frank; Pandey, Udai Bhan 2016 2016-10-01 PMC N PMC5055418 27181519.0 10.1016/j.brainres.2016.05.022 zbxx3k0f 0.483025 Hurley_2014, Dubois_2016, Stoecklin_2012, Emmott_2009, Haasnoot_2010 Aulas_2015
38 Reineke_2011 Animal virus schemes for translation dominance Reineke, Lucas C; Lloyd, Richard E 2011 2011-11-30 None N PMC3272495 22319551.0 10.1016/j.coviro.2011.10.009 5jnuhpp9 0.480838 Trobaugh_2017, den_Boon_2010, Yasuda-Inoue_2013 Roberts_2009, Guerrero_2015
39 Cotton_2006 The VPgPro protein of Turnip mosaic virus: In vitro inhibition of translation from a ribonuclease activity Cotton, Sophie; Dufresne, Philippe J.; Thivierge, Karine; Ide, Christine; Fortin, Marc G. 2006 2006-07-20 PMC N 16647732.0 10.1016/j.virol.2006.03.019 sxhrkozi 0.479586 Stork_2011, Yasuda-Inoue_2013, Li_Z_2010
40 Lutz_2019 Mammalian orthoreovirus infection is enhanced in cells pre-treated with sodium arsenite Michael M. Lutz; Megan P. Worth; Meleana M. Hinchman; John S. L. Parker; Emily D. Ledgerwood 2019 2019-02-20 BioRxiv N 10.1101/555367 cpfwzudq 0.478672 Berkhout_2006, Trobaugh_2017, Volmer_2010
41 Neidermyer_2019 Global analysis of polysome-associated mRNA in vesicular stomatitis virus infected cells Neidermyer, William J.; Whelan, Sean P. J. 2019 2019-06-21 COMM-USE N PMC6608984 31226162.0 10.1371/journal.ppat.1007875 jld1ygxt 0.475382 Trobaugh_2017, Masaki_2015, Stork_2011, Herbert_2016 Wulan_2015, Brunner_2010
42 Jayabalan_2019 Alphavirus nsP3 ADP-ribosylhydrolase Activity Disrupts Stress Granule Formation Aravinth Kumar Jayabalan; Diane E. Griffin; Anthony K. L. Leung 2019 2019-06-20 BioRxiv N 10.1101/629881 n8sjpcbs 0.465457 Yasuda-Inoue_2013, Stork_2011 Zhang_2015
43 Miras_2017 Non-canonical Translation in Plant RNA Viruses Miras, Manuel; Miller, W. Allen; Truniger, Verónica; Aranda, Miguel A. 2017 2017-04-06 COMM-USE N PMC5382211 28428795.0 10.3389/fpls.2017.00494 2t09zqqi 0.464445 Trobaugh_2017, Herbert_2016, Stork_2011 Sasvari_2011
44 Abernathy_2014 Gammaherpesviral Gene Expression and Virion Composition Are Broadly Controlled by Accelerated mRNA Degradation Abernathy, Emma; Clyde, Karen; Yeasmin, Rukhsana; Krug, Laurie T.; Burlingame, Al; Coscoy, Laurent; Glaunsinger, Britt 2014 2014-01-16 COMM-USE N PMC3894220 24453974.0 10.1371/journal.ppat.1003882 p9bdjni9 0.462361 Trobaugh_2017, Herbert_2016, Haasnoot_2010, Abernathy_2015 Sun_D_2016
45 Herbert_2016 A Tale of Two RNAs during Viral Infection: How Viruses Antagonize mRNAs and Small Non-Coding RNAs in The Host Cell Herbert, Kristina M.; Nag, Anita 2016 2016-06-02 COMM-USE N PMC4926174 27271653.0 10.3390/v8060154 btwn1jy0 0.460965 Trobaugh_2017, Berkhout_2006, Gaucherand_2019 Gaucherand_2019, Abernathy_2015
46 Bansal_2020 An interaction network of RNA-binding proteins involved in Drosophila oogenesis Prashali Bansal; Johannes Madlung; Kristina Schaaf; Boris Macek; Fulvia Bono 2020 2020-01-09 BioRxiv N 10.1101/2020.01.08.899146 2f9nc2to 0.458083 Trobaugh_2017, Haasnoot_2010, Dubois_2016 Zhang_2015, Järvelin_2016, Li_Z_2009
47 de_Breyne_2018 Focus on Translation Initiation of the HIV-1 mRNAs de Breyne, Sylvain; Ohlmann, Théophile 2018 2018-12-28 COMM-USE N PMC6337239 30597859.0 10.3390/ijms20010101 zz4w4jp3 0.450894 Yasuda-Inoue_2013, Trobaugh_2017, Abernathy_2015, Herbert_2016, Haasnoot_2010 Guerrero_2015, Sasvari_2011
48 Amorim_2017 Zika virus inhibits eIF2α-dependent stress granule assembly Amorim, Raquel; Temzi, Abdelkrim; Griffin, Bryan D.; Mouland, Andrew J. 2017 2017-07-17 COMM-USE N PMC5531678 28715409.0 10.1371/journal.pntd.0005775 ec8lu2a3 0.448672 Berkhout_2006, Volmer_2010, Trobaugh_2017, den_Boon_2010
49 Montero_2011 Stress Granules in the Viral Replication Cycle Montero, Hilda; Trujillo-Alonso, Vicenta 2011 2011-11-18 COMM-USE N PMC3230854 22163347.0 10.3390/v3112328 9a56rr1j 0.446352 Berkhout_2006, Trobaugh_2017, den_Boon_2010, Herbert_2016 Miller_2011
50 Brown_2008 The Role of the Plant Nucleolus in Pre-mRNA Processing Brown, J. W. S.; Shaw, P. J. 2008 2008-01-01 PMC N PMC7121088 18630759.0 10.1007/978-3-540-76776-3_16 n3omlvfl 0.440273 Dubois_2016, Yasuda-Inoue_2013, Ivanova_2015 Sirri_2007, Wang_2010
51 Narayanan_2013 Interplay between viruses and host mRNA degradation Narayanan, Krishna; Makino, Shinji 2013 2013-07-31 None N PMC3632658 23274304.0 10.1016/j.bbagrm.2012.12.003 685ro9u0 0.438107 Trobaugh_2017, Herbert_2016, Berkhout_2006, Shi_J_2012 Abernathy_2015, Gaucherand_2019, Berkhout_2006
52 Lloyd_2016 Enterovirus Control of Translation and RNA Granule Stress Responses Lloyd, Richard E. 2016 2016-03-30 COMM-USE N PMC4848588 27043612.0 10.3390/v8040093 y6qw1r8i 0.437591 Trobaugh_2017, Herbert_2016, Berkhout_2006, Abernathy_2015, Haasnoot_2010 Zhang_2015, Sun_D_2016
53 Decroly_2011 Conventional and unconventional mechanisms for capping viral mRNA Decroly, Etienne; Ferron, François; Lescar, Julien; Canard, Bruno 2011 2011-12-05 PMC N PMC7097100 22138959.0 10.1038/nrmicro2675 a08rw6bp 0.436198 Stork_2011, Yasuda-Inoue_2013, Herbert_2016, Trobaugh_2017 Gopinath_2015
54 Au_H_2014 Novel viral translation strategies Au, Hilda HT; Jan, Eric 2014 2014-07-08 PMC N PMC7169809 25045163.0 10.1002/wrna.1246 6zfwwybx 0.434755 Trobaugh_2017, Herbert_2016, Gaucherand_2019, Roberts_2009
55 Du_S_2018 Viral-Mediated mRNA Degradation for Pathogenesis Du, Shujuan; Liu, Xiaoqing; Cai, Qiliang 2018 2018-11-29 COMM-USE N PMC6315618 30501096.0 10.3390/biomedicines6040111 4k5exdes 0.426110 Mao_J_2019, Trobaugh_2017, Kim_S_2018 Abernathy_2015, Gaucherand_2019, Meyers_2011
56 Cross_2019 RNA regulatory processes in RNA virus biology Cross, Shaun T.; Michalski, Daniel; Miller, Megan R.; Wilusz, Jeffrey 2019 2019-04-29 PMC N PMC6697219 31034160.0 10.1002/wrna.1536 w5kcno1b 0.420936 Trobaugh_2017, Haasnoot_2010, Berkhout_2006, Herbert_2016, Abernathy_2015
57 Khaperskyy_2016 Selective Degradation of Host RNA Polymerase II Transcripts by Influenza A Virus PA-X Host Shutoff Protein Khaperskyy, Denys A.; Schmaling, Summer; Larkins-Ford, Jonah; McCormick, Craig; Gaglia, Marta M. 2016 2016-02-05 COMM-USE N PMC4744033 26849127.0 10.1371/journal.ppat.1005427 k87d4amo 0.415227 Yasuda-Inoue_2013, Stork_2011, Herbert_2016 Gaucherand_2019, Gaucherand_2018
58 Sztuba-Solińska_2011 Subgenomic messenger RNAs: Mastering regulation of (+)-strand RNA virus life cycle Sztuba-Solińska, Joanna; Stollar, Victor; Bujarski, Jozef J. 2011 2011-04-10 PMC N PMC7111999 21377709.0 10.1016/j.virol.2011.02.007 g410mavp 0.407697 Stork_2011, Yasuda-Inoue_2013, Trobaugh_2017, den_Boon_2010
59 Muller_2017 Nuclease escape elements protect messenger RNA against cleavage by multiple viral endonucleases Muller, Mandy; Glaunsinger, Britt A. 2017 2017-08-25 COMM-USE N PMC5589255 28841715.0 10.1371/journal.ppat.1006593 3tieiaiq 0.407626 Yasuda-Inoue_2013, Trobaugh_2017, Stork_2011, Herbert_2016 Muller_2017
60 Bercovich-Kinori_2016 A systematic view on influenza induced host shutoff Bercovich-Kinori, Adi; Tai, Julie; Gelbart, Idit Anna; Shitrit, Alina; Ben-Moshe, Shani; Drori, Yaron; Itzkovitz, Shalev; Mandelboim, Michal; Stern-Ginossar, Noam 2016 2016-08-15 COMM-USE N PMC5028189 27525483.0 10.7554/elife.18311 zvemg1hc 0.404591 Trobaugh_2017, Haasnoot_2010, Berkhout_2006, Herbert_2016, Abernathy_2015 Gaucherand_2019, Gaucherand_2018
61 Mohr_2012 Host Translation at the Nexus of Infection and Immunity Mohr, Ian; Sonenberg, Nahum 2012 2012-10-18 PMC N PMC7104986 23084916.0 10.1016/j.chom.2012.09.006 kgk7n391 0.392735 Mao_J_2019, Viswanathan_2010 Gaucherand_2019, Roberts_2009
62 Zhu_Y_2016 Enterovirus 71 induces anti-viral stress granule-like structures in RD cells Zhu, Yuanmei; Wang, Bei; Huang, He; Zhao, Zhendong 2016 2016-08-05 None N PMC7124267 27216457.0 10.1016/j.bbrc.2016.05.094 pvbvgaor 0.390678 Trobaugh_2017, den_Boon_2010, Volmer_2010, Berkhout_2006
63 Verchot-Lubicz_2008 Viral Suppressors of Gene Silencing Verchot-Lubicz, J.; Carr, J.P. 2008 2008-12-31 PMC N PMC7149379 10.1016/b978-012374410-4.00718-4 cktp4cu3 0.379239 Trobaugh_2017, Herbert_2016, Berkhout_2006, Haasnoot_2010
64 Gaglia_2010 Viruses and the cellular RNA decay machinery Gaglia, Marta Maria; Glaunsinger, Britt A. 2010 2010-05-06 PMC N PMC7169783 21956906.0 10.1002/wrna.3 qhr6iir6 0.376019 Berkhout_2006, Trobaugh_2017, Haasnoot_2010, Herbert_2016, Shi_J_2012
65 Muller_2017 Nuclease escape elements protect messenger RNA against cleavage by multiple viral endonucleases Mandy Muller; Britt A. Glaunsinger 2017 2017-06-26 BioRxiv N 10.1101/155457 jhwjh12k 0.374926 Trobaugh_2017, Herbert_2016, Yasuda-Inoue_2013, Abernathy_2015 Muller_2017
66 Rattan_1995 Chapter 10 Protein synthesis and regulation in eukaryotes Rattan, Suresh I.S. 1995 1995-12-31 PMC N 10.1016/s1569-2582(06)80012-7 gl6a8f92 0.373648 Dubois_2016, Moon_2012, Brown_2008, Ivanova_2015 Sasvari_2011
67 Moon_2012 Inhibition and Avoidance of mRNA Degradation by RNA Viruses Moon, Stephanie L.; Barnhart, Michael D.; Wilusz, Jeffrey 2012 2012-08-01 PMC N PMC3424362 22626865.0 10.1016/j.mib.2012.04.009 cwwnsx9y 0.367129 Trobaugh_2017, Herbert_2016, Abernathy_2015, Berkhout_2006 Du_S_2018, Abernathy_2015, Gaete-Argel_2019
68 Harwig_2017 The Battle of RNA Synthesis: Virus versus Host Harwig, Alex; Landick, Robert; Berkhout, Ben 2017 2017-10-21 COMM-USE N PMC5691660 29065472.0 10.3390/v9100309 4pf5nsw2 0.366627 Trobaugh_2017, Berkhout_2006, Haasnoot_2010, Abernathy_2015, Herbert_2016 Gaucherand_2019
69 Petersson_2012 The p53 target gene TRIM22 directly or indirectly interacts with the translation initiation factor eIF4E and inhibits the binding of eIF4E to eIF4G Petersson, Jessica; Ageberg, Malin; Sandén, Carl; Olofsson, Tor; Gullberg, Urban; Drott, Kristina 2012 2012-05-31 PMC N PMC7161774 22509910.0 10.1111/boc.201100099 kahi93gj 0.361827 Yasuda-Inoue_2013, Ivanova_2015
70 Gaucherand_2019 The Influenza A Virus Endoribonuclease PA-X Usurps Host mRNA Processing Machinery to Limit Host Gene Expression Gaucherand, Lea; Porter, Brittany K.; Levene, Rachel E.; Price, Emma L.; Schmaling, Summer K.; Rycroft, Chris H.; Kevorkian, Yuzo; McCormick, Craig; Khaperskyy, Denys A.; Gaglia, Marta M. 2019 2019-04-16 None N PMC6499400 30995476.0 10.1016/j.celrep.2019.03.063 99tyhwqe 0.361439 Trobaugh_2017, Herbert_2016, den_Boon_2010 Gaucherand_2018, Neufeldt_2016
71 Gao_X_2010 Tudor-SN interacts with and co-localizes with G3BP in stress granules under stress conditions Gao, Xingjie; Ge, Lin; Shao, Jie; Su, Chao; Zhao, Hong; Saarikettu, Juha; Yao, Xuyang; Yao, Zhi; Silvennoinen, Olli; Yang, Jie 2010 2010-08-20 PMC N PMC7127458 20643132.0 10.1016/j.febslet.2010.07.022 2inmn7lb 0.359887 Yasuda-Inoue_2013, Volmer_2010 Fitzgerald_2013, Aulas_2015, Jayabalan_2019
72 Königs_2020 SRSF7 maintains its homeostasis through the expression of Split-ORFs and nuclear body assembly Königs, Vanessa; de Oliveira Freitas Machado, Camila; Arnold, Benjamin; Blümel, Nicole; Solovyeva, Anfisa; Löbbert, Sinah; Schafranek, Michal; Ruiz De Los Mozos, Igor; Wittig, Ilka; McNicoll, Francois; Schulz, Marcel H.; Müller-McNicoll, Michaela 2020 2020-03-02 PMC N PMC7096898 32123389.0 10.1038/s41594-020-0385-9 0dab3c2u 0.359887 Ivanova_2015, Yasuda-Inoue_2013, Abernathy_2015 Sasvari_2011
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76 Royall_2015 Murine Norovirus 1 (MNV1) Replication Induces Translational Control of the Host by Regulating eIF4E Activity during Infection Royall, Elizabeth; Doyle, Nicole; Abdul-Wahab, Azimah; Emmott, Ed; Morley, Simon J.; Goodfellow, Ian; Roberts, Lisa O.; Locker, Nicolas 2015 2015-02-20 COMM-USE N PMC4335213 25561727.0 10.1074/jbc.m114.602649 wsqc5rwp 0.350679 Trobaugh_2017, Yasuda-Inoue_2013 Sasvari_2011
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78 Peng_2008 Phosphorylation of the arginine/serine dipeptide‐rich motif of the severe acute respiratory syndrome coronavirus nucleocapsid protein modulates its multimerization, translation inhibitory activity and cellular localization Peng, Tsui‐Yi; Lee, Kuan‐Rong; Tarn, Woan‐Yuh 2008 2008-07-09 PMC N PMC7164085 18631359.0 10.1111/j.1742-4658.2008.06564.x raqropjb 0.350157 Volmer_2010
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84 Matos-Perdomo_2019 Nucleolar and Ribosomal DNA Structure under Stress: Yeast Lessons for Aging and Cancer Matos-Perdomo, Emiliano; Machín, Félix 2019 2019-07-26 COMM-USE N PMC6721496 31357498.0 10.3390/cells8080779 8942b94u 0.308082 Dubois_2016, Berkhout_2006, Taschuk_2020, Brown_2008 Sirri_2007, Wulan_2015
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