Topic 15 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 10 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Metcalfe_2012 Interleukin-2 signalling is modulated by a labile disulfide bond in the CD132 chain of its receptor Metcalfe, Clive; Cresswell, Peter; Barclay, A. Neil 2012 2012-01-23 COMM-USE N PMC3352089 22645657.0 10.1098/rsob.110036 iktlbqpx 0.692291 Smith_2003 Schwertassek_2007
2 Kamiya_2016 Design: An assay based on single-polypeptide-chain heterodimeric A2AR/D2R and non-oligomerized fusions for in vivo analysis of their allosteric receptor-receptor interactions Toshio Kamiya; Takashi Masuko; Dasiel Oscar Borroto-Escuela; Haruo Okado; Hiroyasu Nakata 2016 2016-07-26 BioRxiv N 10.1101/065250 t3tm6f9p 0.601110 Ivarsson_2012, Smith_2003, UNKNOWN_1987, Chan_2016 Thangapandian_2012
3 Shen_2013 Removal of a C-terminal serine residue proximal to the inter-chain disulfide bond of a human IgG1 lambda light chain mediates enhanced antibody stability and antibody dependent cell-mediated cytotoxicity Shen, Yang; Zeng, Lin; Zhu, Aiping; Blanc, Tim; Patel, Dipa; Pennello, Anthony; Bari, Amtul; Ng, Stanley; Persaud, Kris; Kang, Yun (Kenneth); Balderes, Paul; Surguladze, David; Hindi, Sagit; Zhou, Qinwei; Ludwig, Dale L.; Snavely, Marshall 2013 2013-05-01 NONCOMM N PMC4169035 23567210.0 10.4161/mabs.24291 mvr41z73 0.588130 Ivarsson_2012, Smith_2003, UNKNOWN_1987, Yang_2012, Chang_2000 Moulaei_2010
4 Shokhen_2009 Challenging a Paradigm: Theoretical Calculations of the Protonation State of the Cys25-His159 Catalytic Diad in Free Papain Shokhen, Michael; Khazanov, Netaly; Albeck, Amnon 2009 2009-12-01 PMC N PMC2767454 19688822.0 10.1002/prot.22516 h8qsila6 0.568133 Smith_2003, Ho_S_2009, Ivarsson_2012 Kanitz_2019, Myllykoski_2017
5 Miyanoiri_2018 Stable-Isotope-Aided NMR Spectroscopy Miyanoiri, Yohei; Takeda, Mitsuhiro; Kainosho, Masatsune 2018 2018-02-09 PMC N PMC7123952 10.1007/978-3-319-28388-3_48 8sv9256h 0.556650 Takeda_2012, Liu_Z_2008 Kainosho_2017
6 Stegmann_2013 Immunoregulation through membrane proteins modified by reducing conditions induced by immune reactions Stegmann, Monika; Metcalfe, Clive; Barclay, A. Neil 2013 2013-01-16 PMC N PMC7163605 23233323.0 10.1002/eji.201242849 nxb5vyuv 0.553320
7 Smaga_2018 MxB restricts HIV-1 by targeting the tri-hexamer interface of the viral capsid Sarah Sierra Smaga; Chaoyi Xu; Brady James Summers; Katherine Marie Digianantonio; Juan Roberto Perilla; Yong Xiong 2018 2018-10-15 BioRxiv N 10.1101/444067 jdoax8co 0.526262 Gomis-Rüth_2003
8 Cerutti_1985 Characterization and localization of CIV polypeptides Cerutti, Martine; Devauchelle, Gérard 1985 1985-08-31 PMC N PMC7131272 18640546.0 10.1016/0042-6822(85)90207-7 cnlager0 0.525721 UNKNOWN_1987, Callison_1999, Yang_2012, UNKNOWN_1993, UNKNOWN_1993 Strong_1991
9 Indelicato_2016 Principles Governing the Self-Assembly of Coiled-Coil Protein Nanoparticles Indelicato, Giuliana; Wahome, Newton; Ringler, Philippe; Müller, Shirley A.; Nieh, Mu-Ping; Burkhard, Peter; Twarock, Reidun 2016 2016-02-01 PMC N PMC4744166 26840729.0 10.1016/j.bpj.2015.10.057 h84kr90p 0.495189 Ivarsson_2012, Kinjo_2012 Doll_2015, Deng_2008
10 Smith_2003 Autoinhibition of Bcr-Abl through Its SH3 Domain Smith, Kristen M.; Yacobi, Rinat; Van Etten, Richard A. 2003 2003-07-31 PMC N PMC7128750 12887890.0 10.1016/s1097-2765(03)00274-0 8ksnihp6 0.481823 Ivarsson_2012
11 Fan_S_2009 Conformational changes in redox pairs of protein structures Fan, Samuel W; George, Richard A; Haworth, Naomi L; Feng, Lina L; Liu, Jason Y; Wouters, Merridee A 2009 2009-08-01 PMC N PMC2776962 19598234.0 10.1002/pro.175 d3gcfepx 0.476109 Ivarsson_2012, Langosch_2011, Smith_2003 Myllykoski_2017
12 Spaulding_2018 Functional role of the type 1 pilus rod structure in mediating host-pathogen interactions Spaulding, Caitlin N; Schreiber, Henry Louis; Zheng, Weili; Dodson, Karen W; Hazen, Jennie E; Conover, Matt S; Wang, Fengbin; Svenmarker, Pontus; Luna-Rico, Areli; Francetic, Olivera; Andersson, Magnus; Hultgren, Scott; Egelman, Edward H 2018 2018-01-18 COMM-USE N PMC5798934 29345620.0 10.7554/elife.31662 948ett42 0.469716 Callison_1999, Gomis-Rüth_2003, Ye_F_2018
13 Doll_2015 Design and optimization of peptide nanoparticles Doll, Tais A. P. F.; Dey, Raja; Burkhard, Peter 2015 2015-10-24 COMM-USE N PMC4619341 26498651.0 10.1186/s12951-015-0119-z 6gsmkmk5 0.462386 Ivarsson_2012, UNKNOWN_1987, Gomis-Rüth_2003, Wang_2014 Wang_2018, Doll_2015, Robinson_2013
14 Fleith_2018 IFIT3 and IFIT2/3 promote IFIT1-mediated translation inhibition by enhancing binding to non-self RNA Renata C Fleith; Harriet V Mears; Edward Emmott; Stephen C Graham; Daniel S Mansur; Trevor R Sweeney 2018 2018-02-08 BioRxiv N 10.1101/261776 j97gul0w 0.453459
15 Locker_1999 An Unconventional Role for Cytoplasmic Disulfide Bonds in Vaccinia Virus Proteins Locker, Jacomine Krijnse; Griffiths, Gareth 1999 1999-01-25 NONCOMM N PMC2132897 9922453.0 f7eavha1 0.452380 Gomis-Rüth_2003
16 Huang_2019 FEZ1 Is Recruited to a Conserved Cofactor Site on Capsid to Promote HIV-1 Trafficking Huang, Pei-Tzu; Summers, Brady James; Xu, Chaoyi; Perilla, Juan R.; Malikov, Viacheslav; Naghavi, Mojgan H.; Xiong, Yong 2019 2019-08-01 PMC N PMC6736649 31422020.0 10.1016/j.celrep.2019.07.079 jppo6b04 0.446280 Gomis-Rüth_2003
17 Takeda_2012 1.12 Labeling Techniques Takeda, M.; Kainosho, M. 2012 2012-12-31 PMC N PMC7151895 10.1016/b978-0-12-374920-8.00116-8 cvib20ca 0.437255 DiMaio_2016 Miyanoiri_2018, Kainosho_2017
18 Doll_2015 Optimizing the design of protein nanoparticles as carriers for vaccine applications Doll, Tais A.P.F.; Neef, Tobias; Duong, Nha; Lanar, David E.; Ringler, Philippe; Müller, Shirley A.; Burkhard, Peter 2015 2015-10-31 None N PMC4587294 26051652.0 10.1016/j.nano.2015.05.003 mgi6aelt 0.436884
19 Li_Q_2006 TMV recombinants encoding fused foreign transmembrane domains to the CP subunit caused local necrotic response on susceptible tobacco Li, Qiaoli; Li, Mangmang; Jiang, Lubin; Zhang, Qingqi; Song, Rentao; Xu, Zhengkai 2006 2006-05-10 PMC N PMC7111735 16542697.0 10.1016/j.virol.2005.11.013 wdq02fb5 0.436480 UNKNOWN_1987, Chang_2000
20 Indu_2009 Disulfide conformation and design at helix N‐termini Indu, S.; Kumar, Senthil T.; Thakurela, Sudhir; Gupta, Mansi; Bhaskara, Ramachandra M.; Ramakrishnan, C.; Varadarajan, Raghavan 2009 2009-10-20 PMC N PMC7167797 19938155.0 10.1002/prot.22641 jqzb67xz 0.427663 Deng_2006, Smith_2003, Yang_2012, Sundaramoorthy_2018
21 VanSlyke_2009 Conformational Maturation and Post-ER Multisubunit Assembly of Gap Junction Proteins VanSlyke, Judy K.; Naus, Christian C.; Musil, Linda S. 2009 2009-05-01 PMC N PMC2675624 19297523.0 10.1091/mbc.e09-01-0062 1gqqz9ta 0.414790
22 Fan_Y_2017 Structure of a pentameric virion-associated fiber with a potential role in Orsay virus entry to host cells Fan, Yanlin; Guo, Yusong R.; Yuan, Wang; Zhou, Ying; Holt, Matthew V.; Wang, Tao; Demeler, Borries; Young, Nicolas L.; Zhong, Weiwei; Tao, Yizhi J. 2017 2017-02-27 COMM-USE N PMC5344674 28241071.0 10.1371/journal.ppat.1006231 lu65iyw9 0.362928 UNKNOWN_1987
23 Zinzula_2012 dsRNA binding characterization of full length recombinant wild type and mutants Zaire ebolavirus VP35 Zinzula, Luca; Esposito, Francesca; Pala, Daniela; Tramontano, Enzo 2012 2012-03-31 PMC N PMC7114247 22289166.0 10.1016/j.antiviral.2012.01.005 5lyve83j 0.349350
24 Branza-Nichita_2002 Role of disulfide bond formation in the folding and assembly of the envelope glycoproteins of a pestivirus Branza-Nichita, Norica; Lazar, Catalin; Durantel, David; Dwek, Raymond A; Zitzmann, Nicole 2002 2002-08-16 PMC N PMC7111099 12163043.0 10.1016/s0006-291x(02)00907-5 tq5uff27 0.335726 Gomis-Rüth_2003 Voß_D_2009, Krey_2010
25 Galilee_2018 Multimerization of HIV-1 integrase hinges on conserved SH3-docking platforms Meytal Galilee; Akram Alian 2018 2018-04-16 BioRxiv N 10.1101/301721 4fuxbte0 0.323053 Ivarsson_2012, Smith_2003 Moulaei_2010