Topic 07 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 10 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Su_L_1999 Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot Su, Li; Chen, Liqing; Egli, Martin; Berger, James M.; Rich, Alexander 1999 1999-01-01 PMC N PMC7097825 10074948.0 10.1038/6722 93qae2al 0.744977
2 Flyak_2020 An ultralong CDRH2 in HCV neutralizing antibody demonstrates structural plasticity of antibodies against E2 glycoprotein Flyak, Andrew I; Ruiz, Stormy E; Salas, Jordan; Rho, Semi; Bailey, Justin R; Bjorkman, Pamela J 2020 2020-03-03 COMM-USE N PMC7064334 32125272.0 10.7554/elife.53169 ye3k61vt 0.738556 Dey_A_2009, Gomis-Rüth_2003
3 Molodenskiy_2019 An automated data processing and analysis pipeline for transmembrane proteins in detergent solutions D. Molodenskiy; H. Mertens; D. Svergun 2019 2019-07-24 BioRxiv N 10.1101/714303 lhriiv4u 0.722629 DiMaio_2016 Voß_D_2009, Pandey_2016, Pedro_2019
4 Low_J_2014 Structure and Dynamics of the HIV-1 Frameshift Element RNA Low, Justin\nT.; Garcia-Miranda, Pablo; Mouzakis, Kathryn D.; Gorelick, Robert J.; Butcher, Samuel E.; Weeks, Kevin M. 2014 2014-06-13 PMC N PMC4089884 24926888.0 10.1021/bi5004926 y6qcig5u 0.719484 Ivarsson_2012
5 Effantin_2016 Cryo-electron Microscopy Structure of the Native Prototype Foamy Virus Glycoprotein and Virus Architecture Effantin, Grégory; Estrozi, Leandro F.; Aschman, Nick; Renesto, Patricia; Stanke, Nicole; Lindemann, Dirk; Schoehn, Guy; Weissenhorn, Winfried 2016 2016-07-11 COMM-USE N PMC4939959 27399201.0 10.1371/journal.ppat.1005721 anp238gu 0.692865 Gomis-Rüth_2003, UNKNOWN_1987, UNKNOWN_1993 Walls_2016
6 Tang_2005 Three-dimensional structure of the bacteriophage P22 tail machine Tang, Liang; Marion, William R; Cingolani, Gino; Prevelige, Peter E; Johnson, John E 2005 2005-06-02 PMC N PMC1150889 15933718.0 10.1038/sj.emboj.7600695 0x1jhya6 0.670792
7 Aik_W_2017 The N-terminal domains of FLASH and Lsm11 form a 2:1 heterotrimer for histone pre-mRNA 3’-end processing Aik, Wei Shen; Lin, Min-Han; Tan, Dazhi; Tripathy, Ashutosh; Marzluff, William F.; Dominski, Zbigniew; Chou, Chi-Yuan; Tong, Liang 2017 2017-10-11 COMM-USE N PMC5636114 29020104.0 10.1371/journal.pone.0186034 lg93okwg 0.665170 Hou_L_2014
8 Ward_2017 The HIV-1 Envelope Glycoprotein Structure: Nailing down a Moving Target Ward, Andrew B.; Wilson, Ian A. 2017 2017-01-01 None N PMC5300090 28133813.0 10.1111/imr.12507 i4ukhnd2 0.663073 Dey_A_2009, Gomis-Rüth_2003
9 Olia_2009 Structural plasticity of the phage P22 tail needle gp26 probed with xenon gas Olia, Adam S; Casjens, Sherwood; Cingolani, Gino 2009 2009-01-01 PMC N PMC2760360 19241380.0 10.1002/pro.53 6b5c6vp7 0.659872 Ivarsson_2012, UNKNOWN_1987, Gomis-Rüth_2003, UNKNOWN_1993 Effantin_2016
10 Li_W_2011 Cross-Crystal Averaging with Search Models to Improve Molecular Replacement Phases Li, Weikai; Li, Fang 2011 2011-02-09 None N PMC3037595 21300285.0 10.1016/j.str.2010.12.007 in8mbp7c 0.656791 RAMAKRISHNA_2015, Jonić_2016
11 Bénard_1996 Pseudoknot and translational control in the expression of the S15 ribosomal protein Bénard, L; Philippe, C; Ehresmann, B; Ehresmann, C; Portier, C 1996 1996-12-31 PMC N PMC7131963 8955900.0 10.1016/s0300-9084(96)80003-4 lds6a5h0 0.640139
12 Chatterjee_2007 NMR assignment of the domain 513–651 from the SARS-CoV nonstructural protein nsp3 Chatterjee, Amarnath; Johnson, Margaret A.; Serrano, Pedro; Pedrini, Bill; Wüthrich, Kurt 2007 2007-10-30 PMC N PMC7090708 19636862.0 10.1007/s12104-007-9052-x e36om23p 0.635954 Gomis-Rüth_2003 Serrano_2008
13 Makrynitsa_2019 Conformational plasticity of the VEEV macro domain is important for binding of ADP-ribose Makrynitsa, Garyfallia I.; Ntonti, Dioni; Marousis, Konstantinos D.; Birkou, Maria; Matsoukas, Minos-Timotheos; Asami, Sam; Bentrop, Detlef; Papageorgiou, Nicolas; Canard, Bruno; Coutard, Bruno; Spyroulias, Georgios A. 2019 2019-04-01 PMC N PMC7111667 30825649.0 10.1016/j.jsb.2019.02.008 euf4sv76 0.635405
14 Ziółkowska_2006 Domain-Swapped Structure of the Potent Antiviral Protein Griffithsin and Its Mode of Carbohydrate Binding Ziółkowska, Natasza E.; O'Keefe, Barry R.; Mori, Toshiyuki; Zhu, Charles; Giomarelli, Barbara; Vojdani, Fakhrieh; Palmer, Kenneth E.; McMahon, James B.; Wlodawer, Alexander 2006 2006-07-31 PMC N PMC7126681 16843894.0 10.1016/j.str.2006.05.017 p2iazl7z 0.632630 Gomis-Rüth_2003, Ivarsson_2012, UNKNOWN_1987 Moulaei_2010, Kanitz_2019, Tsai_2010, Tong_2009
15 Kizziah_2020 Structure of the host cell recognition and penetration machinery of a Staphylococcus aureus bacteriophage Kizziah, James L.; Manning, Keith A.; Dearborn, Altaira D.; Dokland, Terje 2020 2020-02-18 COMM-USE N PMC7048315 32069326.0 10.1371/journal.ppat.1008314 ob5igsv5 0.623070
16 McNulty_2018 Cryo-EM Elucidation of the Structure of Bacteriophage P22 Virions after Genome Release McNulty, Reginald; Cardone, Giovanni; Gilcrease, Eddie B.; Baker, Timothy S.; Casjens, Sherwood R.; Johnson, John E. 2018 2018-03-01 PMC N PMC5883611 29590587.0 10.1016/j.bpj.2018.01.026 nh3oi8kv 0.621695
17 Gaudin_1992 Rabies virus glycoprotein is a trimer Gaudin, Yves; Ruigrok, Rob W.H.; Tuffereau, Christine; Knossow, Marcel; Flamand, Anne 1992 1992-04-30 PMC N PMC7131270 1546457.0 10.1016/0042-6822(92)90465-2 78empsdp 0.594168 UNKNOWN_1987, Gomis-Rüth_2003, Maeda_2001 Effantin_2016, Voß_D_2009
18 Sundaramoorthy_2018 Structure of the chromatin remodelling enzyme Chd1 bound to a ubiquitinylated nucleosome Ramasubramanian Sundaramoorthy; Amanda L. Hughes; Hassane El-Mkami; David Norman; Tom Owen-Hughes 2018 2018-03-30 BioRxiv N 10.1101/290874 ct2zhauz 0.563783 Ivarsson_2012, UNKNOWN_1992 Scrima_2006
19 Zhong_2009 C-terminal domain of SARS-CoV main protease can form a 3D domain-swapped dimer Zhong, Nan; Zhang, Shengnan; Xue, Fei; Kang, Xue; Zou, Peng; Chen, Jiaxuan; Liang, Chao; Rao, Zihe; Jin, Changwen; Lou, Zhiyong; Xia, Bin 2009 2009-01-01 PMC N PMC2762595 19319935.0 10.1002/pro.76 3xc9y5mo 0.561691 UNKNOWN_1987, Ivarsson_2012, Smith_2003, Gomis-Rüth_2003 Voß_D_2009, Tsai_2010
20 Moulaei_2010 Monomerization of Viral Entry Inhibitor Griffithsin Elucidates the Relationship between Multivalent Binding to Carbohydrates and anti-HIV Activity Moulaei, Tinoush; Shenoy, Shilpa R.; Giomarelli, Barbara; Thomas, Cheryl; McMahon, James B.; Dauter, Zbigniew; O'Keefe, Barry R.; Wlodawer, Alexander 2010 2010-09-08 None N PMC3399781 20826337.0 10.1016/j.str.2010.05.016 xslozete 0.559233 Gomis-Rüth_2003, Ivarsson_2012 Ziółkowska_2006
21 Rossmann_2011 Chapter 5 Future prospects Rossmann, Michael G.; Battisti, Anthony J.; Plevka, Pavel 2011 2011-12-31 PMC N 21501821.0 10.1016/b978-0-12-386507-6.00005-1 u0ycqelc 0.551316 DiMaio_2016, Subramaniam_2016
22 Dubois_2012 Astrovirus Structure and Assembly Dubois, Rebecca M.; Dryden, Kelly A.; Yeager, Mark; Tao, Yizhi J. 2012 2012-09-07 PMC N PMC7120587 10.1007/978-1-4614-4735-1_3 czrecnn6 0.544009 Effantin_2016, Walls_2016
23 Shaw_1993 Three-dimensional visualization of the rotavirus hemagglutinin structure Shaw, A.L.; Rothnagel, R.; Chen, D.; Ramig, R.F.; Chiu, W.; Prasad, B.V.Venkataram 1993 1993-08-27 PMC N PMC7133302 8395350.0 10.1016/0092-8674(93)90516-s hmn7mg8j 0.539434 Gomis-Rüth_2003 Effantin_2016
24 Ziółkowska_2007 Crystallographic studies of the complexes of antiviral protein griffithsin with glucose and N-acetylglucosamine Ziółkowska, Natasza E.; Shenoy, Shilpa R.; O'Keefe, Barry R.; Wlodawer, Alexander 2007 2007-07-01 PMC N PMC2206701 17567736.0 10.1110/ps.072889407 8qd1a997 0.533330 Ivarsson_2012, Chan_2016, Tosoni_2015, UNKNOWN_1987 Moulaei_2010, Ziółkowska_2006
25 Park_2018 Structure of the type VI secretion system TssK–TssF–TssG baseplate subcomplex revealed by cryo-electron microscopy Park, Young-Jun; Lacourse, Kaitlyn D.; Cambillau, Christian; DiMaio, Frank; Mougous, Joseph D.; Veesler, David 2018 2018-12-19 COMM-USE N PMC6300606 30568167.0 10.1038/s41467-018-07796-5 mrvjd7pf 0.510237 Ivarsson_2012 Spaulding_2018
26 Kuzmanovic_2008 A novel application of small-angle scattering techniques: Quality assurance testing of virus quantification technology Kuzmanovic, Deborah A.; Elashvili, Ilya; O’Connell, Catherine; Krueger, Susan 2008 2008-03-31 PMC N PMC7127611 10.1016/j.radphyschem.2007.10.004 cz3ce29n 0.498420 Takeda_2012, DiMaio_2016, Molodenskiy_2019
27 Johnson_2010 NMR Structure of the SARS-CoV Nonstructural Protein 7 in Solution at pH 6.5 Johnson, Margaret A.; Jaudzems, Kristaps; Wüthrich, Kurt 2010 2010-10-01 None N PMC3081601 20709084.0 10.1016/j.jmb.2010.07.043 h15192f4 0.492010 UNKNOWN_1987, Callison_1999, Gomis-Rüth_2003 Guarino_2005
28 Cotelesage_2011 Hepatitis B Virus Genotype G forms core-like particles with unique structural properties Cotelesage, J J H; Osiowy, C; Lawrence, C; deVarennes, S L; Teow, S; Beniac, D R; Booth, T F 2011 2011-06-23 COMM-USE N PMC3116152 20546498.0 10.1111/j.1365-2893.2010.01330.x crolji1q 0.491094 UNKNOWN_1987 Effantin_2016
29 Nguyen_2019 Structure and oligomerization state of the C‐terminal region of the Middle East respiratory syndrome coronavirus nucleoprotein Nguyen, Thi Hong Van; Lichière, Julie; Canard, Bruno; Papageorgiou, Nicolas; Attoumani, Sarah; Ferron, François; Coutard, Bruno 2019 2019-01-15 PMC N PMC7159728 30644840.0 10.1107/s2059798318014948 66um92p7 0.487505 Ivarsson_2012, UNKNOWN_1987
30 Bielnicki_2005 B. subtilis ykuD Protein at 2.0 Å Resolution: Insights into the Structure and Function of a Novel, Ubiquitous Family of Bacterial Enzymes Bielnicki, Jakub; Devedjiev, Yancho; Derewenda, Urszula; Dauter, Zbigniew; Joachimiak, Andrzej; Derewenda, Zygmunt S. 2005 2005-11-14 PMC N PMC2792008 16287140.0 10.1002/prot.20702 7kkvj4vy 0.478548 Ivarsson_2012, UNKNOWN_1987, Hou_L_2014, Smith_2003 Myllykoski_2017
31 Serrano_2008 NMR assignment of the nonstructural protein nsp3(1066–1181) from SARS-CoV Serrano, Pedro; Johnson, Margaret A.; Chatterjee, Amarnath; Pedrini, Bill; Wüthrich, Kurt 2008 2008-07-22 None N PMC2776825 19636888.0 10.1007/s12104-008-9104-x oq0cyrd3 0.476242 Chang_2005, Chatterjee_2007, Puglisi_1990, Wang_2014 Chatterjee_2007, Johnson_2010
32 Jonić_2016 Cryo-electron Microscopy Analysis of Structurally Heterogeneous Macromolecular Complexes Jonić, Slavica 2016 2016-10-14 COMM-USE N PMC5072154 27800126.0 10.1016/j.csbj.2016.10.002 toglzyci 0.476217 DiMaio_2016, Subramaniam_2016
33 Czech_2019 Octa-repeat domain of the mammalian prion protein mRNA forms stable A-helical hairpin structure rather than G-quadruplexes Czech, Andreas; Konarev, Petr V.; Goebel, Ingrid; Svergun, Dmitri I.; Wills, Peter R.; Ignatova, Zoya 2019 2019-02-21 None N PMC6384910 30792490.0 10.1038/s41598-019-39213-2 xmgkpk0b 0.470701
34 Punjani_2020 3D Variability Analysis: Directly resolving continuous flexibility and discrete heterogeneity from single particle cryo-EM images Ali Punjani; David J. Fleet 2020 2020-04-09 BioRxiv N 10.1101/2020.04.08.032466 yxo8oanc 0.470701 Liu_Z_2008 Zhong_2020, Jonić_2016, Punjani_2019, Effantin_2016
35 Sutton_2004 The nsp9 Replicase Protein of SARS-Coronavirus, Structure and Functional Insights Sutton, Geoff; Fry, Elizabeth; Carter, Lester; Sainsbury, Sarah; Walter, Tom; Nettleship, Joanne; Berrow, Nick; Owens, Ray; Gilbert, Robert; Davidson, Andrew; Siddell, Stuart; Poon, Leo L.M.; Diprose, Jonathan; Alderton, David; Walsh, Martin; Grimes, Jonathan M.; Stuart, David I. 2004 2004-02-29 PMC N PMC7135010 14962394.0 10.1016/j.str.2004.01.016 ihwwfnbn 0.452847 UNKNOWN_1987
36 Rossmann_2005 Combining X-Ray Crystallography and Electron Microscopy Rossmann, Michael G.; Morais, Marc C.; Leiman, Petr G.; Zhang, Wei 2005 2005-03-31 PMC N 15766536.0 10.1016/j.str.2005.01.005 qnh6tlnm 0.441687 DiMaio_2016
37 Steinbacher_1997 Phage P22 tailspike protein: crystal structure of the head-binding domain at 2.3 Å, fully refined structure of the endorhamnosidase at 1.56 Å resolution, and the molecular basis of O-antigen recognition and cleavage 1 1 Edited by K. Nagai Steinbacher, Stefan; Miller, Stefan; Baxa, Ulrich; Budisa, Nediljko; Weintraub, Andrej; Seckler, Robert; Huber, Robert 1997 1997-04-11 PMC N 9135118.0 10.1006/jmbi.1997.0922 b3shy00j 0.440287 UNKNOWN_1987, Gomis-Rüth_2003, Ivarsson_2012, UNKNOWN_1993, Smith_2003
38 Ziółkowska_2007 Crystallographic, thermodynamic, and molecular modeling studies of the mode of binding of oligosaccharides to the potent antiviral protein griffithsin Ziółkowska, Natasza E.; Shenoy, Shilpa R.; O'Keefe, Barry R.; McMahon, James B.; Palmer, Kenneth E.; Dwek, Raymond A.; Wormald, Mark R.; Wlodawer, Alexander 2007 2007-03-05 PMC N PMC7167611 17340634.0 10.1002/prot.21336 33qd2gpm 0.431772 Ivarsson_2012, Chan_2016, Gomis-Rüth_2003, Snyder_2005
39 Huang_2014 Dimeric Structure of Pseudokinase RNase L Bound to 2-5A Reveals a Basis for Interferon-Induced Antiviral Activity Huang, Hao; Zeqiraj, Elton; Dong, Beihua; Jha, Babal Kant; Duffy, Nicole M.; Orlicky, Stephen; Thevakumaran, Neroshan; Talukdar, Manisha; Pillon, Monica C.; Ceccarelli, Derek F.; Wan, Leo C.K.; Juang, Yu-Chi; Mao, Daniel Y.L.; Gaughan, Christina; Brinton, Margo A.; Perelygin, Andrey A.; Kourinov, Igor; Guarné, Alba; Silverman, Robert H.; Sicheri, Frank 2014 2014-01-23 None N PMC3974923 24462203.0 10.1016/j.molcel.2013.12.025 vc2ketxd 0.426925 Ivarsson_2012, Smith_2003, Choudhury_2017
40 Nelson_2005 Structure and Intracellular Targeting of the SARS-Coronavirus Orf7a Accessory Protein Nelson, Christopher A.; Pekosz, Andrew; Lee, Chung A.; Diamond, Michael S.; Fremont, Daved H. 2005 2005-01-31 PMC N PMC7125549 15642263.0 10.1016/j.str.2004.10.010 mdgjqtdd 0.426505 UNKNOWN_1987, UNKNOWN_1993, UNKNOWN_1993, Ivarsson_2012 Voß_D_2009, Chen_2009
41 DiMaio_2016 Chapter Ten Tools for Model Building and Optimization into Near-Atomic Resolution Electron Cryo-Microscopy Density Maps DiMaio, F.; Chiu, W. 2016 2016-12-31 None N PMC5103630 27572730.0 10.1016/bs.mie.2016.06.003 1voq7zxz 0.423855 Jonić_2016, Subramaniam_2016
42 Mrozowich_2020 Nanoscale Structure Determination of Murray Valley Encephalitis and Powassan Virus Non-Coding RNAs Mrozowich, Tyler; Henrickson, Amy; Demeler, Borries; Patel, Trushar R 2020 2020-02-08 COMM-USE N PMC7077200 32046304.0 10.3390/v12020190 gzjwh42b 0.417842
43 Hurdiss_2020 Cryo-EM structure of coronavirus-HKU1 haemagglutinin esterase reveals architectural changes arising from prolonged circulation in humans Daniel L. Hurdiss; Ieva Drulyte; Yifei Lang; Tatiana M. Shamorkina; Matti F. Pronker; Frank J.M. van Kuppeveld; Joost Snijder; Raoul J. de Groot 2020 2020-03-25 BioRxiv N 10.1101/2020.03.25.998963 5lld270m 0.416494 UNKNOWN_1987, Gomis-Rüth_2003 Effantin_2016
44 Beniac_2012 The Organisation of Ebola Virus Reveals a Capacity for Extensive, Modular Polyploidy Beniac, Daniel R.; Melito, Pasquale L.; deVarennes, Shauna L.; Hiebert, Shannon L.; Rabb, Melissa J.; Lamboo, Lindsey L.; Jones, Steven M.; Booth, Timothy F. 2012 2012-01-11 COMM-USE N PMC3256159 22247782.0 10.1371/journal.pone.0029608 adfigzc1 0.397054 Gomis-Rüth_2003 Effantin_2016
45 Anand_2002 Structure of coronavirus main proteinase reveals combination of a chymotrypsin fold with an extra α-helical domain Anand, Kanchan; Palm, Gottfried J.; Mesters, Jeroen R.; Siddell, Stuart G.; Ziebuhr, John; Hilgenfeld, Rolf 2002 2002-07-01 PMC N PMC126080 12093723.0 10.1093/emboj/cdf327 2sfqsfm1 0.391189 Ivarsson_2012, UNKNOWN_1987, Smith_2003 Tsai_2010
46 Kolchanov_1996 Chemical and Computer Probing of RNA Structure 1 Kolchanov, N.A.; Titov, I.I.; Vlassova, I.E.; Vlassov, V.V. 1996 1996-12-31 PMC N 8650302.0 10.1016/s0079-6603(08)60144-0 xuxlw4c0 0.390524 Myllykoski_2017
47 Eichhorn_2011 Unraveling the structural complexity in a single-stranded RNA tail: implications for efficient ligand binding in the prequeuosine riboswitch Eichhorn, Catherine D.; Feng, Jun; Suddala, Krishna C.; Walter, Nils G.; Brooks, Charles L.; Al-Hashimi, Hashim M. 2011 2011-10-18 NONCOMM N PMC3273816 22009676.0 10.1093/nar/gkr833 kci1lkhj 0.389218 Chan_2016, Ivarsson_2012
48 Doan_2003 Structure of the Nucleocapsid Protein of Porcine Reproductive and Respiratory Syndrome Virus Doan, Danny N.P; Dokland, Terje 2003 2003-11-30 PMC N 14604534.0 10.1016/j.str.2003.09.018 t6r6adx3 0.381345 Gomis-Rüth_2003
49 Tong_2009 Crystal Structure of the N-Acetylmannosamine Kinase Domain of GNE Tong, Yufeng; Tempel, Wolfram; Nedyalkova, Lyudmila; MacKenzie, Farrell; Park, Hee-Won 2009 2009-10-20 COMM-USE N PMC2742894 19841673.0 10.1371/journal.pone.0007165 cijyfa4j 0.380218 Ivarsson_2012, Smith_2003, UNKNOWN_1987 Myllykoski_2017
50 Huang_2016 NMR assignments of the macro domain from Middle East respiratory syndrome coronavirus (MERS-CoV) Huang, Yi-Ping; Cho, Chao-Cheng; Chang, Chi-Fon; Hsu, Chun-Hua 2016 2016-03-18 PMC N PMC7091117 26993639.0 10.1007/s12104-016-9676-9 qgklt8wa 0.367584 Ivarsson_2012, UNKNOWN_1987
51 Xu_X_2009 Crystal Structure of the C-Terminal Cytoplasmic Domain of Non-Structural Protein 4 from Mouse Hepatitis Virus A59 Xu, Xiaoling; Lou, Zhiyong; Ma, Yanlin; Chen, Xuehui; Yang, Zhangsheng; Tong, Xiaohang; Zhao, Qi; Xu, Yuanyuan; Deng, Hongyu; Bartlam, Mark; Rao, Zihe 2009 2009-07-10 COMM-USE N PMC2703826 19593433.0 10.1371/journal.pone.0006217 1beonuh7 0.363617 UNKNOWN_1987, Gomis-Rüth_2003, UNKNOWN_1993, UNKNOWN_1993 Voß_D_2009
52 Ozorowski_2017 Open and Closed Structures Reveal Allostery and Pliability in the HIV-1 Envelope Spike Ozorowski, Gabriel; Pallesen, Jesper; de Val, Natalia; Lyumkis, Dmitry; Cottrell, Christopher A.; Torres, Jonathan L.; Copps, Jeffrey; Stanfield, Robyn L.; Cupo, Albert; Pugach, Pavel; Moore, John P.; Wilson, Ian A.; Ward, Andrew B. 2017 2017-07-12 PMC N PMC5538736 28700571.0 10.1038/nature23010 e6um3fc8 0.361691 Dey_A_2009, Zhou_2007, Gomis-Rüth_2003
53 Ren_B_2016 Structural and functional characterisation of ferret interleukin-2 Ren, Bin; McKinstry, William J.; Pham, Tam; Newman, Janet; Layton, Daniel S.; Bean, Andrew G.; Chen, Zhenjun; Laurie, Karen L.; Borg, Kathryn; Barr, Ian G.; Adams, Timothy E. 2016 2016-02-29 PMC N PMC7102629 26472619.0 10.1016/j.dci.2015.10.007 zxeyjybs 0.348241 Ivarsson_2012
54 Ruigrok_2019 X-ray Structures of the Post-fusion 6-Helix Bundle of the Human Syncytins and their Functional Implications Ruigrok, Katinka; Vaney, Marie-Christine; Buchrieser, Julian; Baquero, Eduard; Hellert, Jan; Baron, Bruno; England, Patrick; Schwartz, Olivier; Rey, Felix A.; Backovic, Marija 2019 2019-12-06 PMC N PMC7094397 31711961.0 10.1016/j.jmb.2019.10.020 i35azado 0.348171 Gomis-Rüth_2003, UNKNOWN_1987, Ivarsson_2012 Gong_2005, Koellhoffer_2012
55 Ou_X_2017 Crystal structure of the receptor binding domain of the spike glycoprotein of human betacoronavirus HKU1 Ou, Xiuyuan; Guan, Hongxin; Qin, Bo; Mu, Zhixia; Wojdyla, Justyna A.; Wang, Meitian; Dominguez, Samuel R.; Qian, Zhaohui; Cui, Sheng 2017 2017-05-23 COMM-USE N PMC5529671 28534504.0 10.1038/ncomms15216 83x77xte 0.344877 UNKNOWN_1987, Gomis-Rüth_2003 Guillén_2009, Voß_D_2009
56 Neuman_2014 Atlas of coronavirus replicase structure Neuman, Benjamin W.; Chamberlain, Peter; Bowden, Fern; Joseph, Jeremiah 2014 2014-12-19 PMC N PMC7114488 24355834.0 10.1016/j.virusres.2013.12.004 q5332l0s 0.343823 Liu_Z_2008 Sutton_2004
57 Walls_2016 Glycan shield and epitope masking of a coronavirus spike protein observed by cryo-electron microscopy Walls, Alexandra C.; Tortorici, M. Alejandra; Frenz, Brandon; Snijder, Joost; Li, Wentao; Rey, Félix A.; DiMaio, Frank; Bosch, Berend-Jan; Veesler, David 2016 2016-09-12 PMC N PMC5515730 27617430.0 10.1038/nsmb.3293 v530u7h0 0.339682 Gomis-Rüth_2003 Walls_2016, Voß_D_2009
58 Xie_M_2009 A phage RNA-binding protein binds to a non-cognate structured RNA and stabilizes its core structure Xie, Mao-Hua; Wu, Qi-Jia; Jiang, Yan-Fei; Bao, Penghui; Zhang, Yi 2009 2009-01-09 PMC N PMC7117394 19000653.0 10.1016/j.bbrc.2008.10.160 job4854r 0.337753 Hou_L_2014 Masters_1992
59 Stehle_2003 Structural evidence for common functions and ancestry of the reovirus and adenovirus attachment proteins Stehle, Thilo; Dermody, Terence S. 2003 2003-02-28 PMC N PMC7169122 12627395.0 10.1002/rmv.379 zgoi2lkv 0.337435 Ivarsson_2012
60 Snyder_2005 The Structure of DC-SIGNR with a Portion of its Repeat Domain Lends Insights to Modeling of the Receptor Tetramer Snyder, Greg A.; Colonna, Marco; Sun, Peter D. 2005 2005-04-15 PMC N PMC7094344 15784257.0 10.1016/j.jmb.2005.01.063 ybncwweg 0.336707 Ivarsson_2012, Smith_2003, UNKNOWN_1987 Moulaei_2010
61 Ruiz_2018 Chicken GRIFIN: Structural characterization in crystals and in solution Ruiz, Federico M.; Gilles, Ulrich; Ludwig, Anna-Kristin; Sehad, Celia; Shiao, Tze Chieh; García Caballero, Gabriel; Kaltner, Herbert; Lindner, Ingo; Roy, René; Reusch, Dietmar; Romero, Antonio; Gabius, Hans-Joachim 2018 2018-03-31 PMC N PMC7115793 29248541.0 10.1016/j.biochi.2017.12.003 a4iu9qg6 0.335936 Ivarsson_2012, Chan_2016, UNKNOWN_1987 Moulaei_2010, Myllykoski_2017
62 Zhou_2019 Crystallization and Structural Determination of the Receptor-Binding Domain of MERS-CoV Spike Glycoprotein Zhou, Haixia; Zhang, Shuyuan; Wang, Xinquan 2019 2019-09-14 PMC N PMC7123399 31883086.0 10.1007/978-1-0716-0211-9_4 9piio754 0.333524 Ivarsson_2012, Dey_A_2009 Zhang_2018, Voß_D_2009
63 Mascarenhas_2017 Understanding protein domain-swapping using structure-based models of protein folding Mascarenhas, Nahren Manuel; Gosavi, Shachi 2017 2017-09-30 PMC N PMC7127520 27867057.0 10.1016/j.pbiomolbio.2016.09.013 2paaybd0 0.330519 Ivarsson_2012, Kinjo_2012, Liu_Z_2008 Ziółkowska_2006, Hayashi_2016, Tong_2009
64 Shang_2018 Cryo-EM structure of infectious bronchitis coronavirus spike protein reveals structural and functional evolution of coronavirus spike proteins Shang, Jian; Zheng, Yuan; Yang, Yang; Liu, Chang; Geng, Qibin; Luo, Chuming; Zhang, Wei; Li, Fang 2018 2018-04-23 COMM-USE N PMC5933801 29684066.0 10.1371/journal.ppat.1007009 s0wmll4q 0.327530 Callison_1999, Li_F_2016, Ivarsson_2012 Walls_2016, Voß_D_2009, Shajahan_2020
65 Kanitz_2019 Structural basis for catalysis and substrate specificity of a 3C-like cysteine protease from a mosquito mesonivirus Kanitz, Manuel; Blanck, Sandra; Heine, Andreas; Gulyaeva, Anastasia A.; Gorbalenya, Alexander E.; Ziebuhr, John; Diederich, Wibke E. 2019 2019-07-31 None N PMC7111312 31078932.0 10.1016/j.virol.2019.05.001 1ksfo0pr 0.326645 Smith_2003, Ivarsson_2012, UNKNOWN_1987
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72 Duquerroy_2005 Central ions and lateral asparagine/glutamine zippers stabilize the post-fusion hairpin conformation of the SARS coronavirus spike glycoprotein Duquerroy, Stéphane; Vigouroux, Armelle; Rottier, Peter J.M.; Rey, Félix A.; Jan Bosch, Berend 2005 2005-05-10 PMC N PMC7111771 15840526.0 10.1016/j.virol.2005.02.022 3laov764 0.305113 Deng_2006, UNKNOWN_1987, Zhang_2018, Wang_2014 Yan_Z_2006
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