Topic 09 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 45 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Koh_H_2015 Changes in the Swine Gut Microbiota in Response to Porcine Epidemic Diarrhea Infection Koh, Hyeon-Woo; Kim, Myun Soo; Lee, Jong-Soo; Kim, Hongik; Park, Soo-Je 2015 2015-07-25 None N PMC4567570 26212519.0 10.1264/jsme2.me15046 o53k7rl6 0.909147
2 Teo_S_2015 The Infant Nasopharyngeal Microbiome Impacts Severity of Lower Respiratory Infection and Risk of Asthma Development Teo, Shu Mei; Mok, Danny; Pham, Kym; Kusel, Merci; Serralha, Michael; Troy, Niamh; Holt, Barbara J.; Hales, Belinda J.; Walker, Michael L.; Hollams, Elysia; Bochkov, Yury A.; Grindle, Kristine; Johnston, Sebastian L.; Gern, James E.; Sly, Peter D.; Holt, Patrick G.; Holt, Kathryn E.; Inouye, Michael 2015 2015-05-13 None N PMC4433433 25865368.0 10.1016/j.chom.2015.03.008 d3r8b74a 0.833401 Blasi_1996
3 Yang_2019 Yersinia pestis Interacts With SIGNR1 (CD209b) for Promoting Host Dissemination and Infection Yang, Kun; He, Yingxia; Park, Chae Gyu; Kang, Young Sun; Zhang, Pei; Han, Yanping; Cui, Yujun; Bulgheresi, Silvia; Anisimov, Andrey P.; Dentovskaya, Svetlana V.; Ying, Xiaoling; Jiang, Lingyu; Ding, Honghui; Njiri, Olivia Adhiambo; Zhang, Shusheng; Zheng, Guoxing; Xia, Lianxu; Kan, Biao; Wang, Xin; Jing, Huaiqi; Yan, Meiying; Li, Wei; Wang, Yuanzhi; Xiamu, Xiding; Chen, Gang; Ma, Ding; Bartra, Sara Schesser; Plano, Gregory V.; Klena, John D.; Yang, Ruifu; Skurnik, Mikael; Chen, Tie 2019 2019-03-12 COMM-USE N PMC6422942 30915064.0 10.3389/fimmu.2019.00096 jsuk1zem 0.794719
4 Teo_S_2014 The infant airway microbiome in health and disease impacts later asthma development Shu Mei Teo; Danny Mok; Kym Pham; Merci Kusel; Michael Serralha; Niamh Troy; Barbara J Holt; Belinda J Hales; Michael L Walker; Elysia Hollams; Yury H Bochkov; Kristine Grindle; Sebastian L Johnston; James E Gern; Peter D Sly; Patrick G Holt; Kathryn E Holt; Michael Inouye 2014 2014-12-02 BioRxiv N 10.1101/012070 z3tgnzth 0.785821 Blasi_1996 Teo_S_2015
5 de_Steenhuijsen_Piters_2019 Interaction between the nasal microbiota and S. pneumoniae in the context of live-attenuated influenza vaccine de Steenhuijsen Piters, Wouter A. A.; Jochems, Simon P.; Mitsi, Elena; Rylance, Jamie; Pojar, Sherin; Nikolaou, Elissavet; German, Esther L.; Holloway, Mark; Carniel, Beatriz F.; Chu, Mei Ling J. N.; Arp, Kayleigh; Sanders, Elisabeth A. M.; Ferreira, Daniela M.; Bogaert, Debby 2019 2019-07-05 None N PMC6611866 31278315.0 10.1038/s41467-019-10814-9 dv2qyke1 0.651510 Jiang_2014
6 Schenck_2016 Composition and immunological significance of the upper respiratory tract microbiota Schenck, Louis Patrick; Surette, Michael G.; Bowdish, Dawn M. E. 2016 2016-11-01 PMC N PMC7164007 27730630.0 10.1002/1873-3468.12455 6jz0kqaw 0.648096
7 Selvin_2019 Culture-dependent and metagenomic analysis of lesser horseshoe bats’ gut microbiome revealing unique bacterial diversity and signatures of potential human pathogens Selvin, Joseph; Lanong, Sheryl; Syiem, Donkupar; De Mandal, Surajit; Kayang, Highland; Kumar, Nachimuthu Senthil; Kiran, G. Seghal 2019 2019-12-31 PMC N PMC7127535 31473248.0 10.1016/j.micpath.2019.103675 eifztaov 0.627743
8 Bogaert_2011 Variability and Diversity of Nasopharyngeal Microbiota in Children: A Metagenomic Analysis Bogaert, Debby; Keijser, Bart; Huse, Susan; Rossen, John; Veenhoven, Reinier; van Gils, Elske; Bruin, Jacob; Montijn, Roy; Bonten, Marc; Sanders, Elisabeth 2011 2011-02-28 COMM-USE N PMC3046172 21386965.0 10.1371/journal.pone.0017035 hp0bp19e 0.624487 Chonmaitree_2017, Hilty_2012
9 Camelo-Castillo_2019 Nasopharyngeal Microbiota in Children With Invasive Pneumococcal Disease: Identification of Bacteria With Potential Disease-Promoting and Protective Effects Camelo-Castillo, Anny; Henares, Desirée; Brotons, Pedro; Galiana, Antonio; Rodríguez, Juan Carlos; Mira, Alex; Muñoz-Almagro, Carmen 2019 2019-01-28 COMM-USE N PMC6360994 30745895.0 10.3389/fmicb.2019.00011 hg0qslyx 0.557041 Chonmaitree_2017
10 de_Steenhuijsen_Piters_2015 Dysbiosis of upper respiratory tract microbiota in elderly pneumonia patients de Steenhuijsen Piters, Wouter A A; Huijskens, Elisabeth G W; Wyllie, Anne L; Biesbroek, Giske; van den Bergh, Menno R; Veenhoven, Reinier H; Wang, Xinhui; Trzciński, Krzysztof; Bonten, Marc J; Rossen, John W A; Sanders, Elisabeth A M; Bogaert, Debby 2015 2015-07-07 PMC N PMC4681870 26151645.0 10.1038/ismej.2015.99 2jupu9s2 0.553292
11 Jiang_2014 Commensal enteric bacteria lipopolysaccharide impairs host defense against disseminated Candida albicans fungal infection Jiang, Tony T.; Chaturvedi, Vandana; Ertelt, James M.; Xin, Lijun; Clark, Dayna R.; Kinder, Jeremy M.; Way, Sing Sing 2014 2014-12-10 PMC N PMC4465067 25492473.0 10.1038/mi.2014.119 pxhatb9k 0.535349
12 Kim_S_2019 Analysis of the Microbiome in the Adenoids of Korean Children with Otitis Media with Effusion Kim, Sung Kyun; Hong, Seok Jin; Pak, Kyung Ho; Hong, Seok Min 2019 2019-12-19 PMC N PMC6937193 31846915.0 10.5152/iao.2019.6650 p5ndmjnz 0.492697 Ruohola_2006, Buzatto_2017, Krenke_2016
13 Chonmaitree_2017 Nasopharyngeal microbiota in infants and changes during viral upper respiratory tract infection and acute otitis media Chonmaitree, Tasnee; Jennings, Kristofer; Golovko, Georgiy; Khanipov, Kamil; Pimenova, Maria; Patel, Janak A.; McCormick, David P.; Loeffelholz, Michael J.; Fofanov, Yuriy 2017 2017-07-14 COMM-USE N PMC5510840 28708872.0 10.1371/journal.pone.0180630 9sxxarar 0.445265 Howie_2014, Hoang_2019 Hilty_2012, Ruohola_2013, Binks_2011, Ruohola_2006
14 Hilty_2012 Nasopharyngeal Microbiota in Infants With Acute Otitis Media Hilty, Markus; Qi, Weihong; Brugger, Silvio D.; Frei, Laurence; Agyeman, Philipp; Frey, Pascal M.; Aebi, Suzanne; Mühlemann, Kathrin 2012 2012-04-01 PMC N PMC7107284 22351941.0 10.1093/infdis/jis024 0ebl5d49 0.397141 Howie_2014 Ruohola_2006, Ruohola_2013, Chonmaitree_2017, Wald_2011
15 Rovery_2005 Veillonella montpellierensis Endocarditis Rovery, Clarisse; Etienne, Anne; Foucault, Cédric; Berger, Pierre; Brouqui, Philippe 2005 2005-07-23 PMC N PMC3371781 16022792.0 10.3201/eid1107.041361 qcbw8zkc 0.364449 Parthasarathy_2006, Curran_2010
16 Lappan_2018 A microbiome case-control study of recurrent acute otitis media identified potentially protective bacterial genera Lappan, Rachael; Imbrogno, Kara; Sikazwe, Chisha; Anderson, Denise; Mok, Danny; Coates, Harvey; Vijayasekaran, Shyan; Bumbak, Paul; Blyth, Christopher C.; Jamieson, Sarra E.; Peacock, Christopher S. 2018 2018-02-20 COMM-USE N PMC5819196 29458340.0 10.1186/s12866-018-1154-3 v7aeg35x 0.353409 Ruohola_2006, Stol_2013, Wald_2011
17 Mochon_2010 Serological Profiling of a Candida albicans Protein Microarray Reveals Permanent Host-Pathogen Interplay and Stage-Specific Responses during Candidemia Mochon, A. Brian; Ye, Jin; Kayala, Matthew A.; Wingard, John R.; Clancy, Cornelius J.; Nguyen, M. Hong; Felgner, Philip; Baldi, Pierre; Liu, Haoping 2010 2010-03-26 COMM-USE N PMC2845659 20361054.0 10.1371/journal.ppat.1000827 8trsa6o6 0.343268 Jiang_2014 Jiang_2014