Topic 03 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 45 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Chahin_2017 Severe Pneumonia Caused by Legionella pneumophila Differential Diagnosis and Therapeutic Considerations Chahin, Abdullah; Opal, Steven M. 2017 2017-03-31 PMC N PMC7135102 28159171.0 10.1016/j.idc.2016.10.009 loib9pmx 0.815835
2 Wunderink_2016 Community Acquired Pneumonia Wunderink, Richard G.; Landmeier, Mark W. 2016 2016-07-21 PMC N PMC7122855 10.1007/978-3-319-43341-7_20 jh7a8lla 0.753587 Wunderink_2019, Krishnamurthy_2016, Kollef_2017 Kollef_2017, Wunderink_2019, File_2003, Davies_2003
3 Cunha_2006 The atypical pneumonias: clinical diagnosis and importance Cunha, B.A. 2006 2006-12-31 PMC N PMC7128183 16669925.0 10.1111/j.1469-0691.2006.01393.x y2y0fmmf 0.751408 Blasi_1996, Saikku_1997
4 Wunderink_2019 Community Acquired Pneumonia Wunderink, Richard G. 2019 2019-07-24 PMC N PMC7120674 10.1007/978-3-030-26710-0_20 aefc78gw 0.715097 Wunderink_2016, Kollef_2017, Krishnamurthy_2016 Kollef_2017, File_2003, Wunderink_2016, Davies_2003
5 Planquette_2013 Place des micro-organismes atypiques et des virus dans les pneumonies aiguës communautaires sévères Planquette, B.; Ferré, A.; Bédos, J. -P. 2013 2013-03-13 PMC N PMC7117816 10.1007/s13546-012-0634-y 3ydpey6l 0.650324 Villacís_2020
6 Bello_2014 Inflammatory response in mixed viral-bacterial community-acquired pneumonia Bello, Salvador; Mincholé, Elisa; Fandos, Sergio; Lasierra, Ana B; Ruiz, María A; Simon, Ana L; Panadero, Carolina; Lapresta, Carlos; Menendez, Rosario; Torres, Antoni 2014 2014-07-29 COMM-USE N PMC4118651 25073709.0 10.1186/1471-2466-14-123 jieoxgfx 0.641467
7 Arget_2019 Successful Treatment of Legionnaires’ Disease with Tigecycline in an Immunocompromised Man with a Legion of Antibiotic Allergies Arget, Michael; Kosar, Justin; Suen, Brandon; Peermohamed, Shaqil 2019 2019-04-30 COMM-USE N PMC6605692 31281760.0 10.7759/cureus.4577 gdplbrsf 0.591646 Wunderink_2016
8 Riedweg-Moreno_2014 Successful management of Panton-Valentine leukocidine-positive necrotising pneumonia and A/H1N1(2009) influenzavirus coinfection in adult Riedweg-Moreno, Karena; Wallet, Frederic; Blazejewski, Caroline; Goffard, Anne 2014 2014-01-16 PMC N PMC3902338 24436283.0 10.1136/bcr-2013-201120 rzijpg5i 0.580419 Krishnamurthy_2016, Apisarnthanarak_2005, Wunderink_2016
9 Saikku_1997 Atypical respiratory pathogens Saikku, Pekka 1997 1997-12-31 PMC N 10.1111/j.1469-0691.1997.tb00464.x hfo35gsq 0.565662 Blasi_1996
10 Lynch_2006 PNEUMONIA | Atypical Lynch, J.P.; Clark, N.M. 2006 2006-12-31 PMC N PMC7150170 10.1016/b0-12-370879-6/00309-4 5sbmy6wh 0.563642 Cunha_2006
11 Meyer_Sauteur_2016 Infection with and Carriage of Mycoplasma pneumoniae in Children Meyer Sauteur, Patrick M.; Unger, Wendy W. J.; Nadal, David; Berger, Christoph; Vink, Cornelis; van Rossum, Annemarie M. C. 2016 2016-03-23 COMM-USE N PMC4803743 27047456.0 10.3389/fmicb.2016.00329 9v0sq8k6 0.550576 Blasi_1996, Krishnamurthy_2016, Apisarnthanarak_2005
12 Gelfer_2015 The clinical impact of the detection of potential etiologic pathogens of community-acquired pneumonia Gelfer, Gita; Leggett, James; Myers, Jillian; Wang, Luan; Gilbert, David N. 2015 2015-12-31 PMC N PMC7125660 26341706.0 10.1016/j.diagmicrobio.2015.08.001 wj0esjwi 0.535963 Dalpke_2016 Kuroki_2010
13 Niederman_2006 PNEUMONIA | Community Acquired Pneumonia, Bacterial and Other Common Pathogens Niederman, M.S. 2006 2006-12-31 PMC N PMC7150347 10.1016/b0-12-370879-6/00310-0 f1dukpso 0.535865 Wunderink_2016 Kollef_2017, File_2003, File_2012
14 Farida_2015 Viruses and Gram-negative bacilli dominate the etiology of community-acquired pneumonia in Indonesia, a cohort study Farida, Helmia; Gasem, M. Hussein; Suryanto, Agus; Keuter, Monique; Zulkarnain, Nasirun; Satoto, Bambang; van der Eijk, Annemiek A.; Djokomoeljanto, R.; Wahyono, Hendro; Verbrugh, Henri A.; Severin, Juliëtte A.; van den Broek, Peterhans J. 2015 2015-09-30 PMC N PMC7110756 26255889.0 10.1016/j.ijid.2015.07.023 djorkl0q 0.512173 Krenke_2016
15 File_2003 Community-acquired pneumonia File, Thomas M 2003 2003-12-13 PMC N PMC7119317 14683661.0 10.1016/s0140-6736(03)15021-0 ijxb6l7f 0.493141 Kollef_2017
16 Yang_2015 Acute Necrotizing Pancreatitis Associated with Mycoplasma pneumoniae Infection in a Child Yang, Aram; Kang, Ben; Choi, So Yoon; Cho, Joong Bum; Kim, Yae-Jean; Jeon, Tae Yeon; Choe, Yon Ho 2015 2015-09-25 NONCOMM N PMC4600707 26473143.0 10.5223/pghn.2015.18.3.209 grclh5e6 0.485515 Song_2017, Blasi_1996 Song_2017
17 Song_2017 Pediatric Mycoplasma pneumoniae Infection Presenting with Acute Cholestatic Hepatitis and Other Extrapulmonary Manifestations in the Absence of Pneumonia Song, Won Jae; Kang, Ben; Lee, Hwa Pyung; Cho, Joongbum; Lee, Hae Jeong; Choe, Yon Ho 2017 2017-06-28 NONCOMM N PMC5517379 28730137.0 10.5223/pghn.2017.20.2.124 76by6vg9 0.462768 Blasi_1996 Yang_2015
18 Herold_2004 Community-acquired and nosocomial pneumonia Herold, Christian J.; Sailer, Johannes G. 2004 2004-01-29 PMC N PMC7149014 14749949.0 10.1007/s00330-003-2162-7 fn43p19j 0.445339 Kollef_2017, File_2003
19 Iroh_Tam_2013 Approach to Common Bacterial Infections Community-Acquired Pneumonia Iroh Tam, Pui-Ying 2013 2013-04-30 PMC N PMC7111623 23481110.0 10.1016/j.pcl.2012.12.009 4dowkeqq 0.441936 Lee_M_2018, Restrepo_2005, Apisarnthanarak_2005 Davies_2003, File_2003, Kollef_2017, Apisarnthanarak_2005
20 Blasi_1996 Clinical features of Chlamydia pneumoniae acute respiratory infection Blasi, Francesco 1996 1996-03-31 PMC N 10.1111/j.1469-0691.1996.tb00585.x nch3kfjo 0.438383
21 File_2012 26 Community-Acquired Pneumonia, Bacterial File, Thomas M. 2012 2012-12-31 PMC N PMC7152131 10.1016/b978-1-4377-0126-5.00026-4 88qpfu6b 0.436084 Krishnamurthy_2016 Kollef_2017, Lynch_2006
22 Musher_2017 Evolving Understanding of the Causes of Pneumonia in Adults, With Special Attention to the Role of Pneumococcus Musher, Daniel M; Abers, Michael S; Bartlett, John G 2017 2017-11-15 PMC N PMC7108120 29028977.0 10.1093/cid/cix549 d8q9lsck 0.435837 Blasi_1996, Krishnamurthy_2016 Krenke_2016, File_2003
23 Dalpke_2016 Underdiagnosing of Mycoplasma pneumoniae infections as revealed by use of a respiratory multiplex PCR panel Dalpke, Alexander; Zimmermann, Stefan; Schnitzler, Paul 2016 2016-09-30 PMC N PMC7127802 27377674.0 10.1016/j.diagmicrobio.2016.06.013 lcv5phyr 0.435056 Curran_2010
24 Shen_2012 Does empirical treatment of community-acquired pneumonia with fluoroquinolones delay tuberculosis treatment and result in fluoroquinolone resistance in Mycobacterium tuberculosis? Controversies and solutions Shen, Gwan-Han; Tsao, Thomas Chang-Yao; Kao, Shang-Jyh; Lee, Jen-Jyh; Chen, Yen-Hsu; Hsieh, Wei-Chung; Hsu, Gwo-Jong; Hsu, Yen-Tao; Huang, Ching-Tai; Lau, Yeu-Jun; Tsao, Shih-Ming; Hsueh, Po-Ren 2012 2012-03-31 PMC N PMC7127649 22285045.0 10.1016/j.ijantimicag.2011.11.014 gmx1p71j 0.434320 Kollef_2017, Kuroki_2010, File_2003
25 Akou'ou_2005 La légionellose chez l'enfant immunocompétent : À propos d'un cas Akou'ou, M.H.; Oger, M.; Gras, G.; Eckart, P.; Penniello, M.J.; Vergnaud, M.; Guillois, B. 2005 2005-04-30 PMC N 15893239.0 10.1016/s0929-693x(05)80012-0 21yty4ib 0.413686 Blasi_1996
26 Cao_B_2010 Viral and Mycoplasma pneumoniae community-acquired pneumonia and novel clinical outcome evaluation in ambulatory adult patients in China Cao, B.; Ren, L.-L.; Zhao, F.; Gonzalez, R.; Song, S.-F.; Bai, L.; Yin, Y. D.; Zhang, Y.-Y.; Liu, Y.-M.; Guo, P.; Zhang, J.-Z.; Wang, J.-W.; Wang, C. 2010 2010-07-11 PMC N PMC7088295 20623362.0 10.1007/s10096-010-1003-2 usf1wiwp 0.411631 Howie_2014
27 Ansart_2006 Pneumonia among Travelers Returning from Abroad Ansart, Séverine; Pajot, Olivier; Grivois, Jean-Philippe; Zeller, Valérie; Klement, Elise; Perez, Lucia; Bossi, Philippe; Bricaire, François; Caumes, Eric 2006 2006-03-10 PMC N PMC7107509 15109472.0 10.2310/7060.2004.17055 wup4jump 0.409983
28 Nakayama_2007 Rapid optimization of antimicrobial chemotherapy given to pediatric patients with community-acquired pneumonia using PCR techniques with serology and standard culture Nakayama, Eiichi; Hasegawa, Keiko; Morozumi, Miyuki; Kobayashi, Reiko; Chiba, Naoko; Ubukata, Kimiko; Nakayama, Eiichi; Iitsuka, Taketoshi; Tajima, Takeshi; Sunakawa, Keisuke 2007 2007-12-31 PMC N 17982719.0 10.1007/s10156-007-0535-6 fejho1of 0.402086 Kuroki_2010, Bulut_2006
29 Davies_2003 Community-acquired pneumonia in children Davies, H Dele 2003 2003-12-23 PMC N PMC2795279 20019854.0 gnkmt2iy 0.398910 Lee_M_2018
30 Mandell_2015 Community-acquired pneumonia: An overview Mandell, Lionel A. 2015 2015-07-29 PMC N PMC7103686 26224210.0 10.1080/00325481.2015.1074030 lknnpz0d 0.396497 File_2003, Kollef_2017
31 Apisarnthanarak_2005 Etiology of Community-Acquired Pneumonia Apisarnthanarak, Anucha; Mundy, Linda M. 2005 2005-03-31 PMC N PMC7119140 15802165.0 10.1016/j.ccm.2004.10.016 mphz1aye 0.389400 Krishnamurthy_2016 File_2003, Kollef_2017
32 Yang_2010 Dual detection of Legionella pneumophila and Legionella species by real-time PCR targeting the 23S-5S rRNA gene spacer region Yang, G.; Benson, R.; Pelish, T.; Brown, E.; Winchell, J.M.; Fields, B. 2010 2010-03-31 PMC N PMC7129662 19438641.0 10.1111/j.1469-0691.2009.02766.x vqu4qhu7 0.388809 Dalpke_2016
33 Song_2008 Epidemiology and clinical outcomes of community-acquired pneumonia in adult patients in Asian countries: a prospective study by the Asian network for surveillance of resistant pathogens Song, Jae-Hoon; Oh, Won Sup; Kang, Cheol-In; Chung, Doo Ryeon; Peck, Kyong Ran; Ko, Kwan Soo; Yeom, Joon Sup; Kim, Choon Kwan; Kim, Shin Woo; Chang, Hyun-Ha; Kim, Yeon-Sook; Jung, Sook-In; Tong, Zhaohui; Wang, Qingtao; Huang, Shao-Guang; Liu, Jien-Wei; Lalitha, M.K.; Tan, Ban-Hock; Van, Pham Hung; Carlos, Celia C.; So, Thomas 2008 2008-02-29 PMC N PMC7134693 18162378.0 10.1016/j.ijantimicag.2007.09.014 hd122vtq 0.364740 Howie_2014, Hsueh_2005
34 Balsalobre-Arenas_2017 Rapid diagnosis of gastrointestinal tract infections due to parasites, viruses, and bacteria Balsalobre-Arenas, Luz; Alarcón-Cavero, Teresa 2017 2017-07-31 PMC N 10.1016/j.eimce.2017.01.033 4dk7mkut 0.353415
35 Restrepo_2005 Antimicrobial Treatment of Community-Acquired Pneumonia Restrepo, Marcos I.; Anzueto, Antonio 2005 2005-03-31 PMC N PMC7119139 15802167.0 10.1016/j.ccm.2004.10.006 yxyniv03 0.318474 File_2003, Apisarnthanarak_2005, Kollef_2017
36 Kuroki_2010 Investigation of pneumonia-causing pathogenic organisms in children and the usefulness of tebipenem pivoxil for their treatment Kuroki, Haruo; Tateno, Noriko; Ikeda, Hiroyuki; Saito, Naoko 2010 2010-12-31 PMC N 10.1007/s10156-010-0053-9 j49dp6q2 0.309157 Dalpke_2016, Hoang_2019 Krenke_2016, Copete_2018
37 Gadsby_2016 Comprehensive Molecular Testing for Respiratory Pathogens in Community-Acquired Pneumonia Gadsby, Naomi J.; Russell, Clark D.; McHugh, Martin P.; Mark, Harriet; Conway Morris, Andrew; Laurenson, Ian F.; Hill, Adam T.; Templeton, Kate E. 2016 2016-04-01 NONCOMM N PMC4787606 26747825.0 10.1093/cid/civ1214 s04e6po9 0.301051 Blatt_2017, Dalpke_2016 Kuroki_2010