| 1 |
Shan_2011 |
Genomic Characterization and High Prevalence of Bocaviruses in Swine |
Shan, Tongling; Lan, Daoliang; Li, Linlin; Wang, Chunmei; Cui, Li; Zhang, Wen; Hua, Xiuguo; Zhu, Caixia; Zhao, Wei; Delwart, Eric |
2011 |
2011-04-15 |
COMM-USE |
N |
PMC3078135 |
21525999.0 |
10.1371/journal.pone.0017292 |
u4649rtx |
0.873256 |
Taboada_2016, Zhang_2020 |
|
| 2 |
Tse_H_2011 |
Discovery and Genomic Characterization of a Novel Ovine Partetravirus and a New Genotype of Bovine Partetravirus |
Tse, Herman; Tsoi, Hoi-Wah; Teng, Jade L. L.; Chen, Xin-Chun; Liu, Haiying; Zhou, Boping; Zheng, Bo-Jian; Woo, Patrick C. Y.; Lau, Susanna K. P.; Yuen, Kwok-Yung |
2011 |
2011-09-27 |
COMM-USE |
N |
PMC3181347 |
21980506.0 |
10.1371/journal.pone.0025619 |
pjdogrs4 |
0.788295 |
Basler_2005 |
|
| 3 |
Yinda_2016 |
A single bat species in Cameroon harbors multiple highly divergent papillomaviruses in stool identified by metagenomics analysis |
Yinda, Claude Kwe; Rector, Annabel; Zeller, Mark; Conceição-Neto, Nádia; Heylen, Elisabeth; Maes, Piet; Ghogomu, Stephen Mbigha; Van Ranst, Marc; Matthijnssens, Jelle |
2016 |
2016-12-31 |
PMC |
N |
PMC7103942 |
|
10.1016/j.virep.2016.08.001 |
g0n18gee |
0.712639 |
|
Lee_D_2019 |
| 4 |
Marcacci_2016 |
Genome characterization of feline morbillivirus from Italy |
Marcacci, Maurilia; De Luca, Eliana; Zaccaria, Guendalina; Di Tommaso, Morena; Mangone, Iolanda; Aste, Giovanni; Savini, Giovanni; Boari, Andrea; Lorusso, Alessio |
2016 |
2016-08-31 |
PMC |
N |
|
27155238.0 |
10.1016/j.jviromet.2016.05.002 |
dxf6qkpb |
0.673762 |
|
|
| 5 |
Masuda_2014 |
Identification of novel bovine group A rotavirus G15P[14] strain from epizootic diarrhea of adult cows by de novo sequencing using a next-generation sequencer |
Masuda, Tsuneyuki; Nagai, Makoto; Yamasato, Hiroshi; Tsuchiaka, Shinobu; Okazaki, Sachiko; Katayama, Yukie; Oba, Mami; Nishiura, Naomi; Sassa, Yukiko; Omatsu, Tsutomu; Furuya, Tetsuya; Koyama, Satoshi; Shirai, Junsuke; Taniguchi, Koki; Fujii, Yoshiki; Todaka, Reiko; Katayama, Kazuhiko; Mizutani, Tetsuya |
2014 |
2014-06-25 |
PMC |
N |
PMC7127257 |
24725447.0 |
10.1016/j.vetmic.2014.03.009 |
ymj5uwvg |
0.654312 |
|
|
| 6 |
Bukhari_2018 |
Description and initial characterization of metatranscriptomic nidovirus-like genomes from the proposed new family Abyssoviridae, and from a sister group to the Coronavirinae, the proposed genus Alphaletovirus |
Bukhari, Khulud; Mulley, Geraldine; Gulyaeva, Anastasia A.; Zhao, Lanying; Shu, Guocheng; Jiang, Jianping; Neuman, Benjamin W. |
2018 |
2018-11-30 |
PMC |
N |
PMC7112036 |
30199753.0 |
10.1016/j.virol.2018.08.010 |
i0hj01xv |
0.646210 |
Wolf_2018 |
|
| 7 |
de_Miranda_2017 |
Characterization of a Novel RNA Virus Discovered in the Autumnal Moth Epirrita autumnata in Sweden |
de Miranda, Joachim R.; Hedman, Harald; Onorati, Piero; Stephan, Jörg; Karlberg, Olof; Bylund, Helena; Terenius, Olle |
2017 |
2017-08-08 |
COMM-USE |
N |
PMC5580471 |
|
10.3390/v9080214 |
1baso3q2 |
0.606466 |
|
|
| 8 |
Tse_H_2012 |
Identification of a Novel Bat Papillomavirus by Metagenomics |
Tse, Herman; Tsang, Alan K. L.; Tsoi, Hoi-Wah; Leung, Andy S. P.; Ho, Chi-Chun; Lau, Susanna K. P.; Woo, Patrick C. Y.; Yuen, Kwok-Yung |
2012 |
2012-08-24 |
COMM-USE |
N |
PMC3427170 |
22937142.0 |
10.1371/journal.pone.0043986 |
srsfkfq1 |
0.600822 |
Taboada_2016, Whiteford_2005 |
Lee_D_2019 |
| 9 |
Xu_X_2020 |
Full-length genome sequence of segmented RNA virus from ticks was obtained using small RNA sequencing data |
Xiaofeng Xu; Jinlong Bei; Yibo Xuan; Jianyuan Chen; Defu Chen; Stephen C. Barker; Samuel Kelava; Bingjun He; Shan Gao; Ze Chen |
2020 |
2020-03-25 |
BioRxiv |
N |
|
|
10.1101/2020.03.24.004796 |
tyun4zlh |
0.599710 |
|
|
| 10 |
Lian_2014 |
Novel Circovirus from Mink, China |
Lian, Hai; Liu, Ye; Li, Nan; Wang, Yuying; Zhang, Shoufeng; Hu, Rongliang |
2014 |
2014-09-23 |
PMC |
N |
PMC4178405 |
25148585.0 |
10.3201/eid2009.140015 |
w9vnk3i6 |
0.563672 |
|
|
| 11 |
Fahsbender_2019 |
Lyon-IARC Polyomavirus DNA in Feces of Diarrheic Cats |
Fahsbender, Elizabeth; Altan, Eda; Estrada, Marko; Seguin, M. Alexis; Young, Pauline; Leutenegger, Christian M.; Delwart, Eric |
2019 |
2019-07-18 |
COMM-USE |
N |
PMC6639616 |
31320414.0 |
10.1128/mra.00550-19 |
aj7texe6 |
0.547790 |
Zhang_2020 |
|
| 12 |
Nicholson_2020 |
Complete Genome Sequence of Bordetella bronchiseptica Strain KM22 |
Nicholson, Tracy L.; Bayles, Darrell O.; Shore, Sarah M. |
2020 |
2020-01-23 |
PMC |
N |
PMC6979298 |
31974149.0 |
10.1128/mra.01207-19 |
ceorbnfz |
0.494241 |
|
|
| 13 |
Pan_C_2018 |
Whole-Genome Sequence of Human Rhinovirus C47, Isolated from an Adult Respiratory Illness Outbreak in Butte County, California, 2017 |
Pan, Chao-Yang; Padilla, Tasha; Yagi, Shigeo; Lewis, Linda S.; Ng, Terry Fei Fan; Marine, Rachel L.; Nix, William Allan; Wadford, Debra A. |
2018 |
2018-02-01 |
PMC |
N |
PMC5794959 |
29437112.0 |
10.1128/genomea.01579-17 |
0p7cdj5v |
0.493432 |
Zhang_2020, Langelier_2017 |
Langelier_2017 |
| 14 |
Host_2016 |
Discovery of a Novel Bat Gammaherpesvirus |
Host, Kurtis M.; Damania, Blossom |
2016 |
2016-02-17 |
COMM-USE |
N |
PMC4863598 |
27303690.0 |
10.1128/msphere.00016-16 |
mz1go5gr |
0.491132 |
|
Lee_D_2019 |
| 15 |
Lojkić_2016 |
Faecal virome of red foxes from peri-urban areas |
Lojkić, Ivana; Biđin, Marina; Prpić, Jelena; Šimić, Ivana; Krešić, Nina; Bedeković, Tomislav |
2016 |
2016-04-30 |
PMC |
N |
PMC7112549 |
27012914.0 |
10.1016/j.cimid.2016.01.005 |
neqj85xf |
0.467636 |
|
Lee_D_2019 |
| 16 |
Dinwiddie_2018 |
Complete Genome Sequences of Four Novel Human Coronavirus OC43 Isolates Associated with Severe Acute Respiratory Infection |
Dinwiddie, Darrell L.; Hardin, Olga; Denson, Jesse L.; Kincaid, John C.; Schwalm, Kurt C.; Stoner, Ashley N.; Abramo, Thomas J.; Thompson, Tonya M.; Putt, Claire M.; Young, Stephen A.; Dehority, Walter N.; Kennedy, Joshua L. |
2018 |
2018-05-24 |
COMM-USE |
N |
PMC5968726 |
29798929.0 |
10.1128/genomea.00452-18 |
srk7xeb8 |
0.454982 |
Zhang_2020 |
|
| 17 |
Lee_D_2019 |
Two novel adenoviruses found in Cave Myotis bats (Myotis velifer) in Oklahoma |
Lee, Dana N.; Angiel, Meagan |
2019 |
2019-12-03 |
PMC |
N |
PMC7089485 |
31797220.0 |
10.1007/s11262-019-01719-2 |
umvk59dc |
0.428469 |
|
|
| 18 |
Tsoleridis_2019 |
Discovery and Prevalence of Divergent RNA Viruses in European Field Voles and Rabbits |
Tsoleridis, Theocharis; Chappell, Joseph G.; Monchatre-Leroy, Elodie; Umhang, Gérald; Shi, Mang; Bennett, Malcolm; Tarlinton, Rachael E.; McClure, C. Patrick; Holmes, Edward C.; Ball, Jonathan K. |
2019 |
2019-12-31 |
COMM-USE |
N |
PMC7019641 |
31906044.0 |
10.3390/v12010047 |
c1qqbhl8 |
0.422455 |
|
Cook_2013 |
| 19 |
Takano_2018 |
Novel single-stranded, circular DNA virus identified in cats in Japan |
Takano, Tomomi; Yanai, Yoshitomo; Hiramatsu, Kanae; Doki, Tomoyoshi; Hohdatsu, Tsutomu |
2018 |
2018-09-14 |
PMC |
N |
PMC7087140 |
30218220.0 |
10.1007/s00705-018-4020-6 |
h9smg0w9 |
0.412209 |
|
Lima_2015 |
| 20 |
Smeele_2018 |
Viruses associated with Antarctic wildlife: From serology based detection to identification of genomes using high throughput sequencing |
Smeele, Zoe E.; Ainley, David G.; Varsani, Arvind |
2018 |
2018-01-02 |
PMC |
N |
PMC7114543 |
29111456.0 |
10.1016/j.virusres.2017.10.017 |
jq3w0pnj |
0.400653 |
|
|
| 21 |
He_B_2013 |
Virome Profiling of Bats from Myanmar by Metagenomic Analysis of Tissue Samples Reveals More Novel Mammalian Viruses |
He, Biao; Li, Zuosheng; Yang, Fanli; Zheng, Junfeng; Feng, Ye; Guo, Huancheng; Li, Yingying; Wang, Yiyin; Su, Nan; Zhang, Fuqiang; Fan, Quanshui; Tu, Changchun |
2013 |
2013-04-22 |
COMM-USE |
N |
PMC3632529 |
23630620.0 |
10.1371/journal.pone.0061950 |
04d0koah |
0.400424 |
|
Lee_D_2019 |
| 22 |
Debat_2018 |
Expanding the size limit of RNA viruses: Evidence of a novel divergent nidovirus in California sea hare, with a ~35.9 kb virus genome |
Humberto J Debat |
2018 |
2018-04-24 |
BioRxiv |
N |
|
|
10.1101/307678 |
n78fga3r |
0.394407 |
Wolf_2018 |
|
| 23 |
Lima_2015 |
Genomic Characterization of Novel Circular ssDNA Viruses from Insectivorous Bats in Southern Brazil |
Lima, Francisco Esmaile de Sales; Cibulski, Samuel Paulo; dos Santos, Helton Fernandes; Teixeira, Thais Fumaco; Varela, Ana Paula Muterle; Roehe, Paulo Michel; Delwart, Eric; Franco, Ana Cláudia |
2015 |
2015-02-17 |
COMM-USE |
N |
PMC4331541 |
25688970.0 |
10.1371/journal.pone.0118070 |
i34vmfpp |
0.387404 |
|
Lee_D_2019 |
| 24 |
Hu_D_2017 |
Virome analysis for identification of novel mammalian viruses in bats from Southeast China |
Hu, Dan; Zhu, Changqiang; Wang, Yi; Ai, Lele; Yang, Lu; Ye, Fuqiang; Ding, Chenxi; Chen, Jiafeng; He, Biao; Zhu, Jin; Qian, Hui; Xu, Wenrong; Feng, Youjun; Tan, Weilong; Wang, Changjun |
2017 |
2017-09-07 |
COMM-USE |
N |
PMC5589946 |
28883450.0 |
10.1038/s41598-017-11384-w |
lc9hvhn3 |
0.369957 |
|
|
| 25 |
Victoria_2008 |
Rapid Identification of Known and New RNA Viruses from Animal Tissues |
Victoria, Joseph G.; Kapoor, Amit; Dupuis, Kent; Schnurr, David P.; Delwart, Eric L. |
2008 |
2008-09-26 |
COMM-USE |
N |
PMC2533695 |
18818738.0 |
10.1371/journal.ppat.1000163 |
c7v0nstn |
0.368632 |
|
|
| 26 |
Wang_2015 |
Whole-Genome Sequencing of Porcine Epidemic Diarrhea Virus by Illumina MiSeq Platform |
Wang, Leyi; Stuber, Tod; Camp, Patrick; Robbe-Austerman, Suelee; Zhang, Yan |
2015 |
2015-09-10 |
PMC |
N |
PMC7120957 |
|
10.1007/978-1-4939-3414-0_18 |
f8a6fjaj |
0.364357 |
|
|
| 27 |
Schürch_2014 |
Metagenomic Survey for Viruses in Western Arctic Caribou, Alaska, through Iterative Assembly of Taxonomic Units |
Schürch, Anita C.; Schipper, Debby; Bijl, Maarten A.; Dau, Jim; Beckmen, Kimberlee B.; Schapendonk, Claudia M. E.; Raj, V. Stalin; Osterhaus, Albert D. M. E.; Haagmans, Bart L.; Tryland, Morten; Smits, Saskia L. |
2014 |
2014-08-20 |
COMM-USE |
N |
PMC4139337 |
25140520.0 |
10.1371/journal.pone.0105227 |
4if0m4if |
0.362062 |
|
Dacheux_2014, Lee_D_2019 |
| 28 |
Cholleti_2018 |
Viral metagenomics reveals the presence of highly divergent quaranjavirus in Rhipicephalus ticks from Mozambique |
Cholleti, Harindranath; Hayer, Juliette; Mulandane, Fernando Chanisso; Falk, Kerstin; Fafetine, Jose; Berg, Mikael; Blomström, Anne-Lie |
2018 |
2018-05-28 |
NONCOMM |
N |
PMC5974704 |
29868166.0 |
10.1080/20008686.2018.1478585 |
moxleyjg |
0.349175 |
|
|
| 29 |
Mihalov-Kovács_2015 |
Candidate New Rotavirus Species in Sheltered Dogs, Hungary |
Mihalov-Kovács, Eszter; Gellért, Ákos; Marton, Szilvia; Farkas, Szilvia L.; Fehér, Enikő; Oldal, Miklós; Jakab, Ferenc; Martella, Vito; Bányai, Krisztián |
2015 |
2015-04-23 |
None |
N |
PMC4378476 |
25811414.0 |
10.3201/eid2104.141370 |
5w7cubqo |
0.348241 |
|
|
| 30 |
Eshoo_2015 |
Survey of Ixodes pacificus Ticks in California Reveals a Diversity of Microorganisms and a Novel and Widespread Anaplasmataceae Species |
Eshoo, Mark W.; Carolan, Heather E.; Massire, Christian; Chou, Danny M.; Crowder, Chris D.; Rounds, Megan A.; Phillipson, Curtis A.; Schutzer, Steven E.; Ecker, David J. |
2015 |
2015-09-16 |
COMM-USE |
N |
PMC4574436 |
26375033.0 |
10.1371/journal.pone.0135828 |
a1t74jsm |
0.341699 |
|
|
| 31 |
Yang_2012 |
Genome characterization of a novel porcine bocavirus |
Yang, Wan-zhu; Yu, Jie-mei; Li, Jin-song; Cheng, Wei-xia; Huang, Can-ping; Duan, Zhao-jun |
2012 |
2012-07-21 |
PMC |
N |
PMC7087259 |
22821184.0 |
10.1007/s00705-012-1407-7 |
qjq5zsfo |
0.339648 |
Taboada_2016 |
Shan_2011 |
| 32 |
Cheung_2013 |
A divergent clade of circular single-stranded DNA viruses from pig feces |
Cheung, Andrew K.; Ng, Terry F.; Lager, Kelly M.; Bayles, Darrell O.; Alt, David P.; Delwart, Eric L.; Pogranichniy, Roman M.; Kehrli, Marcus E. |
2013 |
2013-04-24 |
PMC |
N |
PMC4175981 |
23612924.0 |
10.1007/s00705-013-1701-z |
tu6g977q |
0.301246 |
|
Lima_2015 |