Topic 03 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 35 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Zhou_2014 Selection of Suitable Reference Genes for Normalization of Quantitative Real-Time Polymerase Chain Reaction in Human Cartilage Endplate of the Lumbar Spine Zhou, Zhi-Jie; Zhang, Jian-Feng; Xia, Ping; Wang, Ji-Ying; Chen, Shuai; Fang, Xiang-Qian; Fan, Shun-Wu 2014 2014-02-18 COMM-USE N PMC3928306 24558443.0 10.1371/journal.pone.0088892 eu4vlfui 0.969224 Wang_2007, Yu_H_2007, Samiullah_2017, Sahu_2018 Peletto_2011, Li_Q_2012, Olsvik_2005
2 Samiullah_2017 Reference gene selection for the shell gland of laying hens in response to time-points of eggshell formation and nicarbazin Samiullah, Sami; Roberts, Juliet; Wu, Shu-Biao 2017 2017-07-03 COMM-USE N PMC5495395 28671969.0 10.1371/journal.pone.0180432 chq0vvrr 0.951332 Zhou_2014, Wang_2007, Salem_2014 Khan_2017, Thibivilliers_2009, Bansal_2012, Olsvik_2008
3 Li_K_2018 Identification and Validation of Reference Genes for RT-qPCR Normalization in Mythimna separata (Lepidoptera: Noctuidae) Li, Ke; Xu, Na; Yang, Yu Jing; Zhang, Jin Hui; Yin, Huan 2018 2018-07-31 COMM-USE N PMC6091413 30151374.0 10.1155/2018/1828253 they9j06 0.921228 Wang_2007, Haasnoot_2010 Olsvik_2008, Bansal_2012, Huang_2017, Li_Q_2012
4 Sahu_2018 Selection and validation of suitable reference genes for qPCR gene expression analysis in goats and sheep under Peste des petits ruminants virus (PPRV), lineage IV infection Sahu, Amit Ranjan; Wani, Sajad Ahmad; Saxena, Shikha; Rajak, Kaushal Kishor; Chaudhary, Dheeraj; Sahoo, Aditya Prasad; Khanduri, Alok; Pandey, Aruna; Mondal, Piyali; Malla, Waseem Akram; Khan, Raja Ishaq Nabi; Tiwari, Ashok Kumar; Mishra, Bina; Muthuchelvan, D.; Mishra, Bishnu Prasad; Singh, Raj Kumar; Gandham, Ravi Kumar 2018 2018-10-29 COMM-USE N PMC6206032 30374051.0 10.1038/s41598-018-34236-7 mmcu18c8 0.920868 Zhou_2014, Wang_2007, Brake_2008 Kaur_2018, Peña_2010, Peletto_2011
5 Filby_2007 Appropriate 'housekeeping' genes for use in expression profiling the effects of environmental estrogens in fish Filby, Amy L; Tyler, Charles R 2007 2007-02-08 COMM-USE N PMC1802086 17288598.0 10.1186/1471-2199-8-10 a602au5b 0.917806 Wang_2007, Zhou_2014, Salem_2014, Samiullah_2017 Olsvik_2008, Li_Q_2012, Olsvik_2005, Peña_2010
6 Li_Q_2012 Evaluation of reference genes for real-time quantitative PCR studies in Candida glabrata following azole treatment Li, Qingdi Quentin; Skinner, Jeff; Bennett, John E 2012 2012-06-29 COMM-USE N PMC3482582 22747760.0 10.1186/1471-2199-13-22 whm2ce4u 0.874893 Wang_2007, Zhou_2014, Samiullah_2017, Brake_2008, Salem_2014 Salem_2014, Olsvik_2008, Peña_2010
7 Bansal_2012 Validation of Reference Genes for Gene Expression Studies in Aphis glycines (Hemiptera: Aphididae) Bansal, Raman; Mamidala, Praveen; Mian, M. A. Rouf; Mittapalli, Omprakash; Michel, Andy P. 2012 2012-08-01 PMC N PMC7110211 22928326.0 10.1603/ec12095 lchxtppi 0.868903 Wang_2007, Salem_2014, Zhou_2014, Samiullah_2017 Salem_2014, Olsvik_2008
8 de_Oliveira_2011 Reference Genes for the Normalization of Gene Expression in Eucalyptus Species de Oliveira, Luisa Abruzzi; Breton, Michèle Claire; Bastolla, Fernanda Macedo; Camargo, Sandro da Silva; Margis, Rogério; Frazzon, Jeverson; Pasquali, Giancarlo 2011 2011-12-24 PMC N PMC7107212 22197885.0 10.1093/pcp/pcr187 ttrcmtu4 0.863481 Wang_2007, Yu_H_2007 Li_Q_2012, Olsvik_2008, Qu_R_2019, Maroniche_2011
9 Bogaert_2006 Selection of a set of reliable reference genes for quantitative real-time PCR in normal equine skin and in equine sarcoids Bogaert, Lies; Van Poucke, Mario; De Baere, Cindy; Peelman, Luc; Gasthuys, Frank; Martens, Ann 2006 2006-04-27 COMM-USE N PMC1484482 16643647.0 10.1186/1472-6750-6-24 icp9d998 0.858751 Zhou_2014, Sahu_2018, Wang_2007, Samiullah_2017, Yu_H_2007 Peletto_2011, Li_Q_2012
10 Petriccione_2015 Reference gene selection for normalization of RT-qPCR gene expression data from Actinidia deliciosa leaves infected with Pseudomonas syringae pv. actinidiae Petriccione, Milena; Mastrobuoni, Francesco; Zampella, Luigi; Scortichini, Marco 2015 2015-11-19 COMM-USE N PMC4652207 26581656.0 10.1038/srep16961 nmi39n6h 0.856957 Wang_2007, Zhou_2014, Samiullah_2017, Salem_2014 Bansal_2012, Li_Q_2012, Maroniche_2011, Salem_2014
11 Kaur_2018 Selection of suitable reference genes for normalization of quantitative RT-PCR (RT-qPCR) expression data across twelve tissues of riverine buffaloes (Bubalus bubalis) Kaur, Ramneek; Sodhi, Monika; Sharma, Ankita; Sharma, Vijay Lakshmi; Verma, Preeti; Swami, Shelesh Kumar; Kumari, Parvesh; Mukesh, Manishi 2018 2018-03-06 COMM-USE N PMC5839537 29509770.0 10.1371/journal.pone.0191558 agvkqpt7 0.855328 Samiullah_2017, Zhou_2014, Wang_2007, Salem_2014 Olsvik_2008, Peña_2010, Olsvik_2005, Sahu_2018
12 Khan_2017 Reference gene selection for gene expression study in shell gland and spleen of laying hens challenged with infectious bronchitis virus Khan, Samiullah; Roberts, Juliet; Wu, Shu-Biao 2017 2017-10-27 COMM-USE N PMC5660252 29079779.0 10.1038/s41598-017-14693-2 bkax1pz1 0.853668 Wang_2007, Zhou_2014, Samiullah_2017 Samiullah_2017, Thibivilliers_2009
13 Ayers_2007 Expression stability of commonly used reference genes in canine articular connective tissues Ayers, Duncan; Clements, Dylan N; Salway, Fiona; Day, Philip JR 2007 2007-05-07 COMM-USE N PMC1884148 17484782.0 10.1186/1746-6148-3-7 blhltvns 0.808129 Wang_2007, Zhou_2014, Samiullah_2017, Brake_2008 Maccoux_2007, Peletto_2011, Li_Q_2012
14 Kapila_2013 Identification of Appropriate Reference Genes for qRT-PCR Analysis of Heat-Stressed Mammary Epithelial Cells in Riverine Buffaloes (Bubalus bubalis) Kapila, Neha; Kishore, Amit; Sodhi, Monika; Sharma, Ankita; Kumar, Pawan; Mohanty, A. K.; Jerath, Tanushri; Mukesh, M. 2013 2013-01-28 COMM-USE N PMC4393032 25937980.0 10.5402/2013/735053 6elmzcfl 0.806594 Zhou_2014, Wang_2007, Yu_H_2007 Olsvik_2008, Li_Q_2012, Peletto_2011
15 Wang_2014 Selection of Reference Genes for Gene Expression Studies in Porcine Whole Blood and Peripheral Blood Mononuclear Cells under Polyinosinic:Polycytidylic Acid Stimulation Wang, Jiying; Wang, Yanping; Wang, Huaizhong; Hao, Xiaojing; Wu, Ying; Guo, Jianfeng 2014 2014-04-23 NONCOMM N PMC4093518 25049976.0 10.5713/ajas.2013.13471 xf4yy6i1 0.798703 Wang_2007, Zhou_2014, Brake_2008 Peletto_2011
16 Olsvik_2008 Selection of reference genes for qRT-PCR examination of wild populations of Atlantic cod Gadus morhua Olsvik, Pål A; Søfteland, Liv; Lie, Kai K 2008 2008-07-16 COMM-USE N PMC2527504 18710500.0 10.1186/1756-0500-1-47 6bq0tps2 0.792789 Wang_2007, Zhou_2014, Salem_2014, Samiullah_2017 Olsvik_2005, Bansal_2012, Salem_2014, Peña_2010
17 Peletto_2011 Evaluation of Internal Reference Genes for Quantitative Expression Analysis by Real-Time PCR in Ovine Whole Blood Peletto, Simone; Bertuzzi, Simone; Campanella, Chiara; Modesto, Paola; Maniaci, Maria Grazia; Bellino, Claudio; Ariello, Dario; Quasso, Antonio; Caramelli, Maria; Acutis, Pier Luigi 2011 2011-11-09 COMM-USE N PMC3233434 22174628.0 10.3390/ijms12117732 g2pb02vx 0.769662 Zhou_2014, Yu_H_2007 Li_Q_2012, Sahu_2018, Olsvik_2008
18 Salem_2014 Verifying the Stability of Selected Genes for Normalization in Q PCR Experiments of Spodoptera frugiperda Cells during AcMNPV Infection Salem, Tamer Z.; Allam, Walaa R.; Thiem, Suzanne M. 2014 2014-10-14 COMM-USE N PMC4196776 25313905.0 10.1371/journal.pone.0108516 sng9h1kq 0.743655 Wang_2007, Meng_2006 Bansal_2012, Olsvik_2008, Li_Q_2012
19 Chen_2017 Selection of reference genes for expression analysis using RT-qPCR in the dissemination system of Heliothis virescens ascovirus 3 h (HvAV-3h) Chen, Zi-Shu; Han, Ning-Ning; Li, Jian-Hong; Huang, Guo-Hua; Wan, Hu 2017 2017-08-01 COMM-USE N PMC5539149 28765578.0 10.1038/s41598-017-07684-w rvf3eoy4 0.731781 Wang_2007, Herbert_2016
20 Stamova_2009 Identification and validation of suitable endogenous reference genes for gene expression studies in human peripheral blood Stamova, Boryana S; Apperson, Michelle; Walker, Wynn L; Tian, Yingfang; Xu, Huichun; Adamczy, Peter; Zhan, Xinhua; Liu, Da-Zhi; Ander, Bradley P; Liao, Isaac H; Gregg, Jeffrey P; Turner, Renee J; Jickling, Glen; Lit, Lisa; Sharp, Frank R 2009 2009-08-05 COMM-USE N PMC2736983 19656400.0 10.1186/1755-8794-2-49 tbxar0tu 0.730084 Wang_2007, Yu_H_2007, Zhou_2014, Brake_2008, Samiullah_2017 Peletto_2011, Filby_2007
21 Qu_R_2019 Selection of reference genes for the quantitative real-time PCR normalization of gene expression in Isatis indigotica fortune Qu, Renjun; Miao, Yujing; Cui, Yingjing; Cao, Yiwen; Zhou, Ying; Tang, Xiaoqing; Yang, Jie; Wang, Fangquan 2019 2019-03-25 COMM-USE N PMC6434783 30909859.0 10.1186/s12867-019-0126-y kjvvoveq 0.726732 Yu_H_2007, Zhou_2014 Huang_2017, Li_Q_2012, Olsvik_2008
22 Goossens_2005 Selection of reference genes for quantitative real-time PCR in bovine preimplantation embryos Goossens, Karen; Van Poucke, Mario; Van Soom, Ann; Vandesompele, Jo; Van Zeveren, Alex; Peelman, Luc J 2005 2005-12-03 COMM-USE N PMC1315359 16324220.0 10.1186/1471-213x-5-27 jid2pfhz 0.718420 Zhou_2014, Wang_2007, Yu_H_2007, Salem_2014 Salem_2014, Li_Q_2012, Olsvik_2008
23 Maccoux_2007 Identification of new reference genes for the normalisation of canine osteoarthritic joint tissue transcripts from microarray data Maccoux, Lindsey J; Clements, Dylan N; Salway, Fiona; Day, Philip JR 2007 2007-07-25 COMM-USE N PMC1976117 17651481.0 10.1186/1471-2199-8-62 zr28uujh 0.713554 Wang_2007, Yu_H_2007, Zhou_2014, Brake_2008 Ayers_2007, Zhang_2015
24 Yang_2013 Selection of reference genes for quantitative real-time PCR analysis in chicken embryo fibroblasts infected with avian leukosis virus subgroup J Yang, Falong; Lei, Xiaowen; Rodriguez-Palacios, Alexander; Tang, Cheng; Yue, Hua 2013 2013-10-07 COMM-USE N PMC3851545 24099561.0 10.1186/1756-0500-6-402 w0nl88jz 0.703591 Meng_2006, Wang_2007, Wang_2009, Brake_2008 Yue_H_2010
25 Olsvik_2005 Evaluation of potential reference genes in real-time RT-PCR studies of Atlantic salmon Olsvik, Pål A; Lie, Kai K; Jordal, Ann-Elise O; Nilsen, Tom O; Hordvik, Ivar 2005 2005-11-17 COMM-USE N PMC1314898 16293192.0 10.1186/1471-2199-6-21 1r65yam5 0.697100 Wang_2007, Zhou_2014, Salem_2014 Olsvik_2008, Peña_2010, Kaur_2018, Li_Q_2012
26 Maroniche_2011 Reference gene selection for gene expression studies using RT-qPCR in virus-infected planthoppers Maroniche, Guillermo A; Sagadín, Mónica; Mongelli, Vanesa C; Truol, Graciela A; del Vas, Mariana 2011 2011-06-16 COMM-USE N PMC3142240 21679431.0 10.1186/1743-422x-8-308 2gsso3p5 0.678510 Wang_2007, Zhou_2014, Salem_2014, Yang_2013 Peña_2010, Bansal_2012, Salem_2014
27 Peña_2010 An evaluation of potential reference genes for stability of expression in two salmonid cell lines after infection with either Piscirickettsia salmonis or IPNV Peña, Andrea A; Bols, Niels C; Marshall, Sergio H 2010 2010-04-14 COMM-USE N PMC2873344 20398263.0 10.1186/1756-0500-3-101 0xn6mqh6 0.655347 Wang_2007, Zhou_2014, Salem_2014, Yang_2013, Herbert_2016 Olsvik_2008, Maroniche_2011, Bansal_2012
28 Chey_2010 Validation and application of normalization factors for gene expression studies in rubella virus‐infected cell lines with quantitative real‐time PCR Chey, S.; Claus, C.; Liebert, U.G. 2010 2010-03-09 PMC N PMC7166394 20217898.0 10.1002/jcb.22518 ybfby3xt 0.612867 Wang_2007, Zhou_2014, Haasnoot_2010, Trobaugh_2017
29 Huang_2017 Stable Internal Reference Genes for Normalizing Real-Time Quantitative PCR in Baphicacanthus cusia under Hormonal Stimuli and UV Irradiation, and in Different Plant Organs Huang, Yuxiang; Tan, Hexin; Yu, Jian; Chen, Yue; Guo, Zhiying; Wang, Guoquan; Zhang, Qinglei; Chen, Junfeng; Zhang, Lei; Diao, Yong 2017 2017-05-03 COMM-USE N PMC5413499 28515733.0 10.3389/fpls.2017.00668 ye27nqj2 0.605408 Wang_2007, Zhou_2014, de_Oliveira_2011, Yu_H_2007 Olsvik_2008, Qu_R_2019
30 Yue_H_2010 Reference gene selection for normalization of PCR analysis in chicken embryo fibroblast infected with H5N1 AIV Yue, Hua; Lei, Xiao-wen; Yang, Fa-long; Li, Ming-Yi; Tang, Cheng 2010 2010-12-21 PMC N PMC7090763 21221921.0 10.1007/s12250-010-3114-4 epxbv1hy 0.575977
31 Radonić_2005 Reference gene selection for quantitative real-time PCR analysis in virus infected cells: SARS corona virus, Yellow fever virus, Human Herpesvirus-6, Camelpox virus and Cytomegalovirus infections Radonić, Aleksandar; Thulke, Stefanie; Bae, Hi-Gung; Müller, Marcel A; Siegert, Wolfgang; Nitsche, Andreas 2005 2005-02-10 COMM-USE N PMC549079 15705200.0 10.1186/1743-422x-2-7 efrv5nvf 0.538459
32 Kuchipudi_2012 18S rRNA is a reliable normalisation gene for real time PCR based on influenza virus infected cells Kuchipudi, Suresh V; Tellabati, Meenu; Nelli, Rahul K; White, Gavin A; Perez, Belinda Baquero; Sebastian, Sujith; Slomka, Marek J; Brookes, Sharon M; Brown, Ian H; Dunham, Stephen P; Chang, Kin-Chow 2012 2012-10-08 COMM-USE N PMC3499178 23043930.0 10.1186/1743-422x-9-230 oqnb4gks 0.533633 Yang_2013 Salem_2014
33 Fang_2015 Assessment of reference gene stability in Rice stripe virus and Rice black streaked dwarf virus infection rice by quantitative Real-time PCR Fang, Peng; Lu, Rongfei; Sun, Feng; Lan, Ying; Shen, Wenbiao; Du, Linlin; Zhou, Yijun; Zhou, Tong 2015 2015-10-24 COMM-USE N PMC4619528 26497487.0 10.1186/s12985-015-0405-2 k2apj469 0.442466 Yu_H_2007, Yang_2013 Maroniche_2011, Sahu_2018, Bansal_2012
34 Watson_2007 Determination of suitable housekeeping genes for normalisation of quantitative real time PCR analysis of cells infected with human immunodeficiency virus and herpes viruses Watson, Sarah; Mercier, Sarah; Bye, Chris; Wilkinson, John; Cunningham, Anthony L; Harman, Andrew N 2007 2007-12-03 COMM-USE N PMC2216015 18053162.0 10.1186/1743-422x-4-130 qf2zwbjg 0.385674 Trobaugh_2017 Kuchipudi_2012
35 Volk_2015 Chapter 122 Peritonitis Volk, Susan W. 2015 2015-12-31 PMC N PMC7152366 10.1016/b978-1-4557-0306-7.00122-7 6jkv02if 0.338145