Topic 08 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 34 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Bhosle_2016 A Modified Coupled Spectrophotometric Method to Detect 2-5 Oligoadenylate Synthetase Activity in Prostate Cell Lines Bhosle, Sushma M.; Hunt, Aisha; Chaudhary, Jaideep 2016 2016-03-17 COMM-USE N PMC4797170 26997919.0 10.1186/s12575-016-0038-x 5mj8yvg2 0.753193 Meyerson_2017 Poulsen_2015
2 Poulsen_2015 Enzyme assays for synthesis and degradation of 2-5As and other 2′-5′ oligonucleotides Poulsen, Jesper Buchhave; Kjær, Karina Hansen; Justesen, Just; Martensen, Pia Møller 2015 2015-06-26 COMM-USE N PMC4481073 26113370.0 10.1186/s12858-015-0043-8 7jn2snih 0.703043 Meyerson_2017 Player_1998, Bhosle_2016
3 Gusho_2014 Murine AKAP7 Has a 2′,5′-Phosphodiesterase Domain That Can Complement an Inactive Murine Coronavirus ns2 Gene Gusho, Elona; Zhang, Rong; Jha, Babal K.; Thornbrough, Joshua M.; Dong, Beihua; Gaughan, Christina; Elliott, Ruth; Weiss, Susan R.; Silverman, Robert H. 2014 2014-07-01 None N PMC4161237 24987090.0 10.1128/mbio.01312-14 n69am8q7 0.680940 Meyerson_2017, Ban_J_2018
4 Banerjee_2019 OAS-RNase L innate immune pathway mediates the cytotoxicity of a DNA-demethylating drug Banerjee, Shuvojit; Gusho, Elona; Gaughan, Christina; Dong, Beihua; Gu, Xiaorong; Holvey-Bates, Elise; Talukdar, Manisha; Li, Yize; Weiss, Susan R.; Sicheri, Frank; Saunthararajah, Yogen; Stark, George R.; Silverman, Robert H. 2019 2019-03-12 None N PMC6421468 30814222.0 10.1073/pnas.1815071116 9cyn8vc0 0.633038 Ban_J_2018 Ezelle_2016, Jha_B_2012
5 Brandmann_2015 Crystal structure of the C-terminal 2’,5’-phosphodiesterase domain of group A rotavirus protein VP3 Brandmann, Tobias; Jinek, Martin 2015 2015-03-25 None N PMC5068548 25758703.0 10.1002/prot.24794 tt0n5d57 0.629493 Meyerson_2017, Ban_J_2018, Dixit_2013
6 Jha_B_2012 O030 Evasion of the OAS-RNase L pathway by murine coronavirus ns2 protein is required for viral replication and hepatitis Jha, B.K.; Zhao, L.; Wu, A.; Elliot, R.; Ziebuhr, J.; Gorbalenya, A.E.; Weiss, S.R.; Silverman, R.H. 2012 2012-09-30 PMC N PMC7130074 10.1016/j.cyto.2012.06.064 4hey869h 0.617569 Meyerson_2017, Ban_J_2018, Li_C_2017 Zhao_2012
7 Huang_2014 Dimeric Structure of Pseudokinase RNase L Bound to 2-5A Reveals a Basis for Interferon-Induced Antiviral Activity Huang, Hao; Zeqiraj, Elton; Dong, Beihua; Jha, Babal Kant; Duffy, Nicole M.; Orlicky, Stephen; Thevakumaran, Neroshan; Talukdar, Manisha; Pillon, Monica C.; Ceccarelli, Derek F.; Wan, Leo C.K.; Juang, Yu-Chi; Mao, Daniel Y.L.; Gaughan, Christina; Brinton, Margo A.; Perelygin, Andrey A.; Kourinov, Igor; Guarné, Alba; Silverman, Robert H.; Sicheri, Frank 2014 2014-01-23 None N PMC3974923 24462203.0 10.1016/j.molcel.2013.12.025 vc2ketxd 0.607748 Choudhury_2017 Brandmann_2015
8 Zhang_2013 RNase L restricts the mobility of engineered retrotransposons in cultured human cells Zhang, Ao; Dong, Beihua; Doucet, Aurélien J.; Moldovan, John B.; Moran, John V.; Silverman, Robert H. 2013 2013-12-25 COMM-USE N PMC3973342 24371271.0 10.1093/nar/gkt1308 8xvbnuv0 0.604290 Case_2017
9 Banerjee_2014 Cell-Type-Specific Effects of RNase L on Viral Induction of Beta Interferon Banerjee, Shuvojit; Chakrabarti, Arindam; Jha, Babal Kant; Weiss, Susan R.; Silverman, Robert H. 2014 2014-02-25 NONCOMM N PMC3940032 24570368.0 10.1128/mbio.00856-14 h0lv21dw 0.592909 Ban_J_2018, Meyerson_2017, Zhu_Z_2018 Ezelle_2016
10 Drappier_2018 A novel mechanism of RNase L inhibition: Theiler's virus L* protein prevents 2-5A from binding to RNase L Drappier, Melissa; Jha, Babal Kant; Stone, Sasha; Elliott, Ruth; Zhang, Rong; Vertommen, Didier; Weiss, Susan R.; Silverman, Robert H.; Michiels, Thomas 2018 2018-04-13 COMM-USE N PMC5927464 29652922.0 10.1371/journal.ppat.1006989 zuxdnaon 0.567166 Ban_J_2018, Meyerson_2017 Sorgeloos_2013, Zhao_2012
11 Player_1998 The 2–5 A system: Modulation of viral and cellular processes through acceleration of RNA degradation Player, Mark R.; Torrence, Paul F. 1998 1998-05-31 PMC N 9623881.0 10.1016/s0163-7258(97)00167-8 7yrmd2ig 0.566068 Meyerson_2017 Poulsen_2015, Silverman_2014
12 Chitrakar_2018 Realtime 2-5A kinetics suggests interferons β and λ evade global arrest of translation by RNase L Alisha Chitrakar; Sneha Rath; Jesse Donovan; Kaitlin Demarest; Yize Li; Raghavendra Rao Sridhar; Susan R. Weiss; Sergei V. Kotenko; Ned S. Wingreen; Alexei Korennykh 2018 2018-11-26 BioRxiv N 10.1101/476341 mxdvdw9u 0.565080 Meyerson_2017, Ban_J_2018 Ezelle_2016, Jha_B_2012
13 Silverman_2014 Viral Phosphodiesterases That Antagonize Double-Stranded RNA Signaling to RNase L by Degrading 2-5A Silverman, Robert H.; Weiss, Susan R. 2014 2014-06-01 PMC N PMC4046343 24905202.0 10.1089/jir.2014.0007 356xv03n 0.561284 Meyerson_2017, Dixit_2013, Ban_J_2018
14 Zhao_2012 Antagonism of the Interferon-Induced OAS-RNase L Pathway by Murine Coronavirus ns2 Protein Is Required for Virus Replication and Liver Pathology Zhao, Ling; Jha, Babal K.; Wu, Ashley; Elliott, Ruth; Ziebuhr, John; Gorbalenya, Alexander E.; Silverman, Robert H.; Weiss, Susan R. 2012 2012-06-14 None N PMC3377938 22704621.0 10.1016/j.chom.2012.04.011 zgdzd24d 0.531216 Meyerson_2017, Ban_J_2018 Jha_B_2012, Case_2017
15 Sorgeloos_2013 Evasion of Antiviral Innate Immunity by Theiler's Virus L* Protein through Direct Inhibition of RNase L Sorgeloos, Frédéric; Jha, Babal Kant; Silverman, Robert H.; Michiels, Thomas 2013 2013-06-27 COMM-USE N PMC3694852 23825954.0 10.1371/journal.ppat.1003474 f0t5e46j 0.516645 Meyerson_2017, Ban_J_2018, Li_C_2017 Zhao_2012, Jha_B_2012
16 Deng_2017 Coronavirus nonstructural protein 15 mediates evasion of dsRNA sensors and limits apoptosis in macrophages Deng, Xufang; Hackbart, Matthew; Mettelman, Robert C.; O’Brien, Amornrat; Mielech, Anna M.; Yi, Guanghui; Kao, C. Cheng; Baker, Susan C. 2017 2017-05-08 PMC N PMC5448190 28484023.0 10.1073/pnas.1618310114 zfn440oj 0.516027 Ban_J_2018, Meyerson_2017 Case_2017, Kindler_2017
17 Chakrabarti_2011 New Insights into the Role of RNase L in Innate Immunity Chakrabarti, Arindam; Jha, Babal Kant; Silverman, Robert H. 2011 2011-01-01 PMC N PMC3021357 21190483.0 10.1089/jir.2010.0120 f73xb6to 0.482193 Meyerson_2017, Ban_J_2018 Ezelle_2016, Silverman_2014
18 Whelan_2019 The host antiviral ribonuclease L protein supports Zika virus replication factory formation to enhance infectious virus production Jillian N Whelan; Joshua Hatterschide; David M. Renner; Beihua Dong; Robert H Silverman; Susan R Weiss 2019 2019-11-24 BioRxiv N 10.1101/852194 f9mpkzni 0.468844 Meyerson_2017
19 Goswami_2004 Apoptosis induced by a cytopathic hepatitis A virus is dependent on caspase activation following ribosomal RNA degradation but occurs in the absence of 2′–5′ oligoadenylate synthetase Goswami, Biswendu B.; Kulka, Michael; Ngo, Diana; Cebula, Thomas A. 2004 2004-09-30 PMC N PMC7127220 15451183.0 10.1016/j.antiviral.2004.02.004 xemarhlv 0.468060 Meyerson_2017, Ban_J_2018
20 Rath_2018 Concerted 2-5A-Mediated mRNA Decay and Transcription Reprogram Protein Synthesis in dsRNA Response Sneha Rath; Eliza Prangley; Jesse Donovan; Kaitlin Demarest; Yigal Meir; Ned Wingreen; Alexei Korennykh 2018 2018-12-04 BioRxiv N 10.1101/484675 ng5c7xai 0.457304 Meyerson_2017 Chitrakar_2018
21 Gusho_2016 New advances in our understanding of the “unique” RNase L in host pathogen interaction and immune signaling Gusho, Elona; Baskar, Danika; Banerjee, Shuvojit 2016 2016-08-29 PMC N 10.1016/j.cyto.2016.08.009 j5qt1td0 0.453051 Martín-Vicente_2017 Ezelle_2016, Chakrabarti_2011
22 Park_2014 Inhibition of hepatitis B virus replication by ligand-mediated activation of RNase L Park, Il-Hyun; Kwon, Young-Chan; Ryu, Wang-Shick; Ahn, Byung-Yoon 2014 2014-04-30 PMC N PMC7119188 24509240.0 10.1016/j.antiviral.2014.01.021 989t9ld1 0.452512 Meyerson_2017, Ban_J_2018 Zhao_2012, Jha_B_2012
23 Liu_Y_2017 Interferon-inducible ribonuclease ISG20 inhibits hepatitis B virus replication through directly binding to the epsilon stem-loop structure of viral RNA Liu, Yuanjie; Nie, Hui; Mao, Richeng; Mitra, Bidisha; Cai, Dawei; Yan, Ran; Guo, Ju-Tao; Block, Timothy M.; Mechti, Nadir; Guo, Haitao 2017 2017-04-11 COMM-USE N PMC5388505 28399146.0 10.1371/journal.ppat.1006296 3eph4c57 0.435785 Meyerson_2017
24 Sui_C_2019 CRISPR-Cas9 Mediated RNase L Knockout Regulates Cellular Function of PK-15 Cells and Increases PRV Replication Sui, Chao; Jiang, Dandan; Wu, Xiangju; Cong, Xiaoyan; Li, Feng; Shang, Yingli; Wang, Jinqiu; Liu, Sidang; Shan, Hu; Qi, Jing; Du, Yijun 2019 2019-03-03 COMM-USE N PMC6421005 30941371.0 10.1155/2019/7398208 f7n4cyq2 0.427655 Meyerson_2017, Ban_J_2018
25 Danilenko_2019 Development of Drugs Based on High-Polymeric Double-Stranded RNA for Antiviral and Antitumor Therapy Danilenko, E. D.; Belkina, A. O.; Sysoeva, G. M. 2019 2019-12-04 PMC N PMC7104317 10.1134/s1990750819040036 03sqz89c 0.399151 Lester_2014, Rajsbaum_2013, Dixit_2013 Banerjee_2019
26 Drappier_2015 Inhibition of the OAS/RNase L pathway by viruses Drappier, Melissa; Michiels, Thomas 2015 2015-12-31 PMC N 26231767.0 10.1016/j.coviro.2015.07.002 4pop84ge 0.393851 Dixit_2013, Meyerson_2017, Lester_2014, Ban_J_2018 Jha_B_2012, Silverman_2014
27 Li_Y_2019 Activation of RNase L in Egyptian Rousette Bat-Derived RoNi/7 Cells Is Dependent Primarily on OAS3 and Independent of MAVS Signaling Li, Yize; Dong, Beihua; Wei, Zuzhang; Silverman, Robert H.; Weiss, Susan R. 2019 2019-11-12 COMM-USE N PMC6851283 31719180.0 10.1128/mbio.02414-19 pkovyjo6 0.393065 Meyerson_2017, Ban_J_2018 Jha_B_2012, Zhao_2012, Case_2017
28 Thornbrough_2016 Middle East Respiratory Syndrome Coronavirus NS4b Protein Inhibits Host RNase L Activation Thornbrough, Joshua M.; Jha, Babal K.; Yount, Boyd; Goldstein, Stephen A.; Li, Yize; Elliott, Ruth; Sims, Amy C.; Baric, Ralph S.; Silverman, Robert H.; Weiss, Susan R. 2016 2016-03-29 COMM-USE N PMC4817253 27025250.0 10.1128/mbio.00258-16 74rwdt96 0.375833 Meyerson_2017, Ban_J_2018, Dixit_2013 Rabouw_2016, Case_2017, Comar_2019
29 Lee_W_2019 OAS1 and OAS3 negatively regulate the expression of chemokines and interferon-responsive genes in human macrophages Lee, Wook-Bin; Choi, Won Young; Lee, Dong-Hyun; Shim, Hyeran; Kim-Ha, Jeongsil; Kim, Young-Joon 2019 2019-02-28 NONCOMM N PMC6443328 30078389.0 10.5483/bmbrep.2019.52.2.129 c9ljml1a 0.334222 Ban_J_2018, Dixit_2013, Meyerson_2017, Zhu_Z_2018 Jha_B_2012
30 Li_Y_2017 Ribonuclease L mediates the cell-lethal phenotype of double-stranded RNA editing enzyme ADAR1 deficiency in a human cell line Li, Yize; Banerjee, Shuvojit; Goldstein, Stephen A; Dong, Beihua; Gaughan, Christina; Rath, Sneha; Donovan, Jesse; Korennykh, Alexei; Silverman, Robert H; Weiss, Susan R 2017 2017-03-31 COMM-USE N PMC5404912 28362255.0 10.7554/elife.25687 3g6uswt9 0.327818 Ban_J_2018, Meyerson_2017 Banerjee_2019
31 Burgess_2015 Cellular 5′-3′ mRNA Exonuclease Xrn1 Controls Double-Stranded RNA Accumulation and Anti-Viral Responses Burgess, Hannah M.; Mohr, Ian 2015 2015-03-11 None N PMC4826345 25766294.0 10.1016/j.chom.2015.02.003 wi30tue8 0.323347 Meyerson_2017, Ban_J_2018
32 Liu_S_2015 Poxvirus Decapping Enzymes Enhance Virulence by Preventing the Accumulation of dsRNA and the Induction of Innate Antiviral Responses Liu, Shin-Wu; Katsafanas, George C.; Liu, Ruikang; Wyatt, Linda S.; Moss, Bernard 2015 2015-03-01 PMC N PMC4359750 25766293.0 10.1016/j.chom.2015.02.002 fyq96v9b 0.314597 Meyerson_2017, Ban_J_2018 Clavarino_2012