Topic 01 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 34 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Zhou_2018 Identification and characterization of GLDC as host susceptibility gene to severe influenza Zhou, Jie; Wang, Dong; Wong, Bosco Ho‐Yin; Li, Cun; Poon, Vincent Kwok‐Man; Wen, Lei; Zhao, Xiaoyu; Chiu, Man Chun; Liu, Xiaojuan; Ye, Ziwei; Yuan, Shuofeng; Sze, Kong‐Hung; Chan, Jasper Fuk‐Woo; Chu, Hin; To, Kelvin Kai‐Wang; Yuen, Kwok Yung 2018 2018-11-28 None N PMC6328914 30498026.0 10.15252/emmm.201809528 j8aggx8l 0.906284 Ban_J_2018 Case_2017
2 Guix_2015 Type I Interferon Response Is Delayed in Human Astrovirus Infections Guix, Susana; Pérez-Bosque, Anna; Miró, Lluïsa; Moretó, Miquel; Bosch, Albert; Pintó, Rosa M. 2015 2015-04-02 COMM-USE N PMC4383485 25837699.0 10.1371/journal.pone.0123087 98pr8yed 0.834883 Ban_J_2018, Meyerson_2017 Carrero_2013, Chen_2019
3 Cavanaugh_2015 Homeostatic interferon expression in neurons is sufficient for early control of viral infection Cavanaugh, Sarah E.; Holmgren, Alicia M.; Rall, Glenn F. 2015 2015-02-01 PMC N PMC4325274 25669994.0 10.1016/j.jneuroim.2014.12.012 jy9xn3rf 0.820069 Ban_J_2018, Dixit_2013 Carrero_2013, Read_2019
4 Lindqvist_2016 Fast type I interferon response protects astrocytes from flavivirus infection and virus-induced cytopathic effects Lindqvist, Richard; Mundt, Filip; Gilthorpe, Jonathan D.; Wölfel, Silke; Gekara, Nelson O.; Kröger, Andrea; Överby, Anna K. 2016 2016-10-24 COMM-USE N PMC5078952 27776548.0 10.1186/s12974-016-0748-7 09tcnsxv 0.791800 Ban_J_2018 Chen_2019
5 Kapil_2012 Oligodendroglia are limited in type I interferon induction and responsiveness in vivo Kapil, Parul; Butchi, Niranjan B.; Stohlman, Stephen A.; Bergmann, Cornelia C. 2012 2012-06-26 None N PMC3422432 22736486.0 10.1002/glia.22375 5cobuedr 0.782891 Dixit_2013, Ban_J_2018, Swiecki_2010 Read_2019, Carrero_2013
6 Panda_2019 IRF1 Maintains Optimal Constitutive Expression of Antiviral Genes and Regulates the Early Antiviral Response Panda, Debasis; Gjinaj, Erisa; Bachu, Mahesh; Squire, Erica; Novatt, Hilary; Ozato, Keiko; Rabin, Ronald L. 2019 2019-05-15 COMM-USE N PMC6529937 31156620.0 10.3389/fimmu.2019.01019 qmpnal06 0.741088 Ban_J_2018, Dixit_2013, Zhu_Z_2018, Zhang_2019, Meyerson_2017 Carrero_2013
7 Lietzén_2011 Quantitative Subcellular Proteome and Secretome Profiling of Influenza A Virus-Infected Human Primary Macrophages Lietzén, Niina; Öhman, Tiina; Rintahaka, Johanna; Julkunen, Ilkka; Aittokallio, Tero; Matikainen, Sampsa; Nyman, Tuula A. 2011 2011-05-12 COMM-USE N PMC3093355 21589892.0 10.1371/journal.ppat.1001340 jfbtjg83 0.736235 Lester_2014, Mao_J_2019, Ban_J_2018
8 Hwang_2018 Alpha/Beta Interferon (IFN-α/β) Signaling in Astrocytes Mediates Protection against Viral Encephalomyelitis and Regulates IFN-γ-Dependent Responses Hwang, Mihyun; Bergmann, Cornelia C. 2018 2018-04-27 COMM-USE N PMC5923078 29491163.0 10.1128/jvi.01901-17 ynionj5r 0.694991 Ban_J_2018, Lester_2014 Read_2019
9 Kint_2014 Quantification of Interferon Signaling in Avian Cells Kint, Joeri; Forlenza, Maria 2014 2014-12-18 PMC N PMC7123703 25720486.0 10.1007/978-1-4939-2438-7_21 i0egrp3g 0.646239 Dixit_2013, Liu_Y_2017, Lester_2014, Ban_J_2018 Peteranderl_2017, Skjesol_2009, Egli_2014
10 Raaben_2009 Type I interferon receptor-independent and -dependent host transcriptional responses to mouse hepatitis coronavirus infection in vivo Raaben, Matthijs; Groot Koerkamp, Marian JA; Rottier, Peter JM; de Haan, Cornelis AM 2009 2009-08-03 COMM-USE N PMC2728740 19650917.0 10.1186/1471-2164-10-350 m0va36er 0.645977 Ban_J_2018, Zhu_Z_2018, López_2011 Chen_2019, Carrero_2013
11 Andrejeva_2013 ISG56/IFIT1 is primarily responsible for interferon-induced changes to patterns of parainfluenza virus type 5 transcription and protein synthesis Andrejeva, J.; Norsted, H.; Habjan, M.; Thiel, V.; Goodbourn, S.; Randall, R. E. 2013 2013-01-23 COMM-USE N PMC3542720 23052390.0 10.1099/vir.0.046797-0 mv0zxl4w 0.624895 Ban_J_2018, Meyerson_2017 Clavarino_2012
12 Dornfeld_2018 SMARCA2-regulated host cell factors are required for MxA restriction of influenza A viruses Dornfeld, Dominik; Dudek, Alexandra H.; Vausselin, Thibaut; Günther, Sira C.; Hultquist, Judd F.; Giese, Sebastian; Khokhlova-Cubberley, Daria; Chew, Yap C.; Pache, Lars; Krogan, Nevan J.; Garcia-Sastre, Adolfo; Schwemmle, Martin; Shaw, Megan L. 2018 2018-02-01 None N PMC5794779 29391557.0 10.1038/s41598-018-20458-2 7j9p8j5c 0.623106 Ban_J_2018, Meyerson_2017 Case_2017
13 Blondel_2015 Resistance to Rhabdoviridae Infection and Subversion of Antiviral Responses Blondel, Danielle; Maarifi, Ghizlane; Nisole, Sébastien; Chelbi-Alix, Mounira K. 2015 2015-07-07 COMM-USE N PMC4517123 26198243.0 10.3390/v7072794 9lbj9hzx 0.621484 Dixit_2013 Sidhu_1996, Chen_2019
14 Pauli_2008 Influenza A Virus Inhibits Type I IFN Signaling via NF-κB-Dependent Induction of SOCS-3 Expression Pauli, Eva-K.; Schmolke, Mirco; Wolff, Thorsten; Viemann, Dorothee; Roth, Johannes; Bode, Johannes G.; Ludwig, Stephan 2008 2008-11-07 COMM-USE N PMC2572141 18989459.0 10.1371/journal.ppat.1000196 amvlm09p 0.621162 Ban_J_2018, Meyerson_2017, Zhu_Z_2018, Dixit_2013 Carrero_2013
15 Xu_D_2009 Promyelocytic Leukemia Zinc Finger Protein Regulates Interferon-Mediated Innate Immunity Xu, Dakang; Holko, Michelle; Sadler, Anthony J.; Scott, Bernadette; Higashiyama, Shigeki; Berkofsky-Fessler, Windy; McConnell, Melanie J.; Pandolfi, Pier Paolo; Licht, Jonathan D.; Williams, Bryan R.G. 2009 2009-06-19 None N PMC2711215 19523849.0 10.1016/j.immuni.2009.04.013 7bb103k7 0.619471 Dixit_2013, Lester_2014, Ban_J_2018, Martín-Vicente_2017 Carrero_2013, Maelfait_2012, Read_2019, Egli_2014
16 Liang_2015 Cloning, expression, and antiviral activity of interferon β from the Chinese microbat, Myotis davidii Liang, Ying-Zi; Wu, Li-Jun; Zhang, Qian; Zhou, Peng; Wang, Mei-Niang; Yang, Xing-Lou; Ge, Xing-Yi; Wang, Lin-Fa; Shi, Zheng-Li 2015 2015-12-07 PMC N PMC7091266 26645237.0 10.1007/s12250-015-3668-2 50slzxj0 0.612579
17 Gounder_2016 Defensins Potentiate a Neutralizing Antibody Response to Enteric Viral Infection Gounder, Anshu P.; Myers, Nicolle D.; Treuting, Piper M.; Bromme, Beth A.; Wilson, Sarah S.; Wiens, Mayim E.; Lu, Wuyuan; Ouellette, André J.; Spindler, Katherine R.; Parks, William C.; Smith, Jason G. 2016 2016-03-02 COMM-USE N PMC4774934 26933888.0 10.1371/journal.ppat.1005474 emmwsv9p 0.585628 Lester_2014, Rajsbaum_2013
18 Chen_2019 The role of microglia in viral encephalitis: a review Chen, Zhuangzhuang; Zhong, Di; Li, Guozhong 2019 2019-04-09 COMM-USE N PMC6454758 30967139.0 10.1186/s12974-019-1443-2 hugenn14 0.576515 Dixit_2013, Lester_2014, Ban_J_2018
19 Mar_K_2018 LY6E mediates an evolutionarily conserved enhancement of virus infection by targeting a late entry step Mar, Katrina B.; Rinkenberger, Nicholas R.; Boys, Ian N.; Eitson, Jennifer L.; McDougal, Matthew B.; Richardson, R. Blake; Schoggins, John W. 2018 2018-09-06 None N PMC6127192 30190477.0 10.1038/s41467-018-06000-y r38t0m0n 0.565094 Ban_J_2018, Dixit_2013, Meyerson_2017 Case_2017
20 Palma-Ocampo_2015 Interferon lambda inhibits dengue virus replication in epithelial cells Palma-Ocampo, Helen K.; Flores-Alonso, Juan C.; Vallejo-Ruiz, Verónica; Reyes-Leyva, Julio; Flores-Mendoza, Lilian; Herrera-Camacho, Irma; Rosas-Murrieta, Nora H.; Santos-López, Gerardo 2015 2015-09-28 COMM-USE N PMC4584467 26411318.0 10.1186/s12985-015-0383-4 oumvnt2f 0.563708 Ban_J_2018, Zhu_Z_2018, Meyerson_2017 Carrero_2013, Skjesol_2009
21 Wang_2019 Identification of DNA methylation regulated novel host genes relevant to inhibition of virus replication in porcine PK15 cell using double stranded RNA mimics and DNA methyltransferase inhibitor Wang, Xiaoshuo; Ao, Hong; Song, Minyan; Bai, Lijing; He, Weiyong; Wang, Chuduan; Yu, Ying 2019 2019-12-31 None N PMC7125705 30315899.0 10.1016/j.ygeno.2018.09.020 cwlo3qpg 0.563412
22 Barriocanal_2015 Long Non-Coding RNA BST2/BISPR is Induced by IFN and Regulates the Expression of the Antiviral Factor Tetherin Barriocanal, Marina; Carnero, Elena; Segura, Victor; Fortes, Puri 2015 2015-01-09 COMM-USE N PMC4288319 25620967.0 10.3389/fimmu.2014.00655 oldy0gta 0.562681 Carnero_2014, Reich_2013
23 Barber_2013 Identification of avian RIG-I responsive genes during influenza infection Barber, Megan RW; Aldridge, Jerry R; Fleming-Canepa, Ximena; Wang, Yong-Dong; Webster, Robert G; Magor, Katharine E 2013 2013-05-01 PMC N PMC3565471 23220072.0 10.1016/j.molimm.2012.10.038 ql7tq62p 0.556663 Ban_J_2018
24 Zhu_Z_2018 Early Growth Response Gene-1 Suppresses Foot-and-Mouth Disease Virus Replication by Enhancing Type I Interferon Pathway Signal Transduction Zhu, Zixiang; Du, Xiaoli; Li, Pengfei; Zhang, Xiangle; Yang, Fan; Cao, Weijun; Tian, Hong; Zhang, Keshan; Liu, Xiangtao; Zheng, Haixue 2018 2018-09-27 COMM-USE N PMC6170816 30319594.0 10.3389/fmicb.2018.02326 nph2ezii 0.549291 Ban_J_2018, Meyerson_2017 Chen_2019
25 Grunewald_2019 The coronavirus macrodomain is required to prevent PARP-mediated inhibition of virus replication and enhancement of IFN expression Grunewald, Matthew E.; Chen, Yating; Kuny, Chad; Maejima, Takashi; Lease, Robert; Ferraris, Dana; Aikawa, Masanori; Sullivan, Christopher S.; Perlman, Stanley; Fehr, Anthony R. 2019 2019-05-16 COMM-USE N PMC6521996 31095648.0 10.1371/journal.ppat.1007756 2zvqopyu 0.546584 Ban_J_2018, Meyerson_2017
26 Kimmel_2011 Oligomeric procyanidins stimulate innate antiviral immunity in dengue virus infected human PBMCs Kimmel, Emily M.; Jerome, Maria; Holderness, Jeff; Snyder, Deann; Kemoli, Sharon; Jutila, Mark A.; Hedges, Jodi F. 2011 2011-04-01 PMC N PMC3076897 21371507.0 10.1016/j.antiviral.2011.02.011 yp9z0a74 0.538272 Swiecki_2010, Ban_J_2018, Dixit_2013 Sidhu_1996, Wang_2015
27 Corredor_2016 N-Myc expression enhances the oncolytic effects of vesicular stomatitis virus in human neuroblastoma cells Corredor, Juan C; Redding, Nicole; Bloté, Karen; Robbins, Stephen M; Senger, Donna L; Bell, John C; Beaudry, Paul 2016 2016-03-16 NONCOMM N PMC5008254 27626059.0 10.1038/mto.2016.5 pnw5ytj4 0.537685 Ban_J_2018, Zhu_Z_2018
28 Li_Y_2017 Ribonuclease L mediates the cell-lethal phenotype of double-stranded RNA editing enzyme ADAR1 deficiency in a human cell line Li, Yize; Banerjee, Shuvojit; Goldstein, Stephen A; Dong, Beihua; Gaughan, Christina; Rath, Sneha; Donovan, Jesse; Korennykh, Alexei; Silverman, Robert H; Weiss, Susan R 2017 2017-03-31 COMM-USE N PMC5404912 28362255.0 10.7554/elife.25687 3g6uswt9 0.536604 Ban_J_2018, Meyerson_2017 Banerjee_2019
29 Lee_S_2004 Porcine reproductive and respiratory syndrome virus field isolates differ in in vitro interferon phenotypes Lee, Sang-Myeong; Schommer, Susan K.; Kleiboeker, Steven B. 2004 2004-12-08 PMC N PMC7112598 15507307.0 10.1016/j.vetimm.2004.09.009 n5w1f0rr 0.530150 Ban_J_2018, Zhu_Z_2018, Meyerson_2017 Chen_2019
30 Uzri_2013 Characterization of Rotavirus RNAs That Activate Innate Immune Signaling through the RIG-I-Like Receptors Uzri, Dina; Greenberg, Harry B. 2013 2013-07-23 COMM-USE N PMC3720929 23894547.0 10.1371/journal.pone.0069825 90uqe4ql 0.526341 Meyerson_2017, Ban_J_2018
31 Hernandez_2018 Life-threatening influenza pneumonitis in a child with inherited IRF9 deficiency Hernandez, Nicholas; Melki, Isabelle; Jing, Huie; Habib, Tanwir; Huang, Susie S.Y.; Danielson, Jeffrey; Kula, Tomasz; Drutman, Scott; Belkaya, Serkan; Rattina, Vimel; Lorenzo-Diaz, Lazaro; Boulai, Anais; Rose, Yoann; Kitabayashi, Naoki; Rodero, Mathieu P.; Dumaine, Cecile; Blanche, Stéphane; Lebras, Marie-Noëlle; Leung, Man Chun; Mathew, Lisa Sara; Boisson, Bertrand; Zhang, Shen-Ying; Boisson-Dupuis, Stephanie; Giliani, Silvia; Chaussabel, Damien; Notarangelo, Luigi D.; Elledge, Stephen J.; Ciancanelli, Michael J.; Abel, Laurent; Zhang, Qian; Marr, Nico; Crow, Yanick J.; Su, Helen C.; Casanova, Jean-Laurent 2018 2018-10-01 None N PMC6170168 30143481.0 10.1084/jem.20180628 jqv0lyfx 0.525917 Ban_J_2018, Zhu_Z_2018, Meyerson_2017 Chen_2019, Sedeyn_2019, Lamborn_2017
32 Goulet_2013 Systems Analysis of a RIG-I Agonist Inducing Broad Spectrum Inhibition of Virus Infectivity Goulet, Marie-Line; Olagnier, David; Xu, Zhengyun; Paz, Suzanne; Belgnaoui, S. Mehdi; Lafferty, Erin I.; Janelle, Valérie; Arguello, Meztli; Paquet, Marilene; Ghneim, Khader; Richards, Stephanie; Smith, Andrew; Wilkinson, Peter; Cameron, Mark; Kalinke, Ulrich; Qureshi, Salman; Lamarre, Alain; Haddad, Elias K.; Sekaly, Rafick Pierre; Peri, Suraj; Balachandran, Siddharth; Lin, Rongtuan; Hiscott, John 2013 2013-04-25 COMM-USE N PMC3635991 23633948.0 10.1371/journal.ppat.1003298 r6c7kmqj 0.525548 Ban_J_2018, Dixit_2013, Meyerson_2017, Martín-Vicente_2017 Uzri_2013
33 Go_Y_2014 Equine Arteritis Virus Does Not Induce Interferon Production in Equine Endothelial Cells: Identification of Nonstructural Protein 1 as a Main Interferon Antagonist Go, Yun Young; Li, Yanhua; Chen, Zhenhai; Han, Mingyuan; Yoo, Dongwan; Fang, Ying; Balasuriya, Udeni B. R. 2014 2014-05-25 COMM-USE N PMC4055586 24967365.0 10.1155/2014/420658 5wy321g6 0.524670 Ban_J_2018, Meyerson_2017, Zhu_Z_2018 Chen_2019, Sidhu_1996
34 Case_2017 Mouse hepatitis virus nsp14 exoribonuclease activity is required for resistance to innate immunity James Brett Case; Yize Li; Ruth Elliott; Xiaotao Lu; Kevin W. Graepel; Nicole R. Sexton; Everett Clinton Smith; Susan R. Weiss; Mark R. Denison 2017 2017-08-29 BioRxiv N 10.1101/182196 p3b4yk5d 0.511243 Meyerson_2017, Ban_J_2018
35 Gopinath_2018 Microbiota-independent antiviral protection conferred by aminoglycoside antibiotics Smita Gopinath; Myoungjoo V. Kim; Tasfia Rakib; Patrick W. Wong; Michael van Zandt; Natasha A. Barry; Tsuneyasu Kaisho; Andrew L. Goodman; Akiko Iwasaki 2018 2018-01-16 BioRxiv N 10.1101/248617 dzorkks5 0.508498 Ban_J_2018, Dixit_2013, Meyerson_2017 Carrero_2013, Chen_2019, Sidhu_1996
36 Zhang_2017 Identification and function analysis of canine stimulator of interferon gene (STING) Zhang, Yuxiang; Zhu, Mengyan; Li, Gairu; Liu, Jie; Zhai, Xiaofeng; Wang, Ruyi; Zhang, Junyan; Xing, Gang; Gu, Jinyan; Yan, Liping; Lei, Jing; Sun, Haifeng; Shi, Zhiyu; Liu, Fei; Hu, Boli; Su, Shuo; Zhou, Jiyong 2017 2017-12-31 PMC N PMC7127566 29074428.0 10.1016/j.micpath.2017.10.047 3qn7luah 0.505784 Ban_J_2018, Meyerson_2017, Zhu_Z_2018, Dixit_2013 Lee_W_2013
37 Zorzitto_2006 Characterization of the antiviral effects of interferon-α against a SARS-like coronoavirus infection in vitro Zorzitto, Joanna; Galligan, Carole L; Ueng, Joanna JM; Fish, Eleanor N 2006 2006-02-16 PMC N PMC7091892 16474437.0 10.1038/sj.cr.7310030 28te0j0d 0.503657 Ban_J_2018, Dixit_2013, Martín-Vicente_2017, Zhang_2019 Sidhu_1996, Carrero_2013
38 Lane_2018 The Efficacy of the Interferon Alpha/Beta Response versus Arboviruses Is Temperature Dependent Lane, Whitney C.; Dunn, Matthew D.; Gardner, Christina L.; Lam, L. K. Metthew; Watson, Alan M.; Hartman, Amy L.; Ryman, Kate D.; Klimstra, William B. 2018 2018-04-24 COMM-USE N PMC5915735 29691338.0 10.1128/mbio.00535-18 3omybzhz 0.503611 Ban_J_2018 Egli_2014, Carrero_2013
39 Zhang_2019 miR-26a Inhibits Feline Herpesvirus 1 Replication by Targeting SOCS5 and Promoting Type I Interferon Signaling Zhang, Jikai; Li, Zhijie; Huang, Jiapei; Yin, Hang; Tian, Jin; Qu, Liandong 2019 2019-12-18 COMM-USE N PMC7020096 31861450.0 10.3390/v12010002 tlctqm9f 0.503399 Ban_J_2018, Dixit_2013, Meyerson_2017, Martín-Vicente_2017 Li_L_2015, Chen_2019
40 Lundberg_2019 Zika Virus Non-Structural Protein NS5 Inhibits the RIG-I Pathway and Interferon Lambda 1 Promoter Activation by Targeting IKK Epsilon Lundberg, Rickard; Melén, Krister; Westenius, Veera; Jiang, Miao; Österlund, Pamela; Khan, Hira; Vapalahti, Olli; Julkunen, Ilkka; Kakkola, Laura 2019 2019-11-04 COMM-USE N PMC6893776 31690057.0 10.3390/v11111024 wfnux72d 0.500794 Ban_J_2018, Meyerson_2017, Dixit_2013, Li_C_2017 Unterholzner_2011
41 Rose_2007 Altered Levels of STAT1 and STAT3 Influence the Neuronal Response to Interferon Gamma Rose, R. Wesley; Vorobyeva, Anna G.; Skipworth, Jason D.; Nicolas, Emmanuelle; Rall, Glenn F. 2007 2007-12-01 PMC N PMC2180831 18006082.0 10.1016/j.jneuroim.2007.10.007 f6q2467c 0.500794
42 Tian_2018 Lab-Attenuated Rabies Virus Causes Abortive Infection and Induces Cytokine Expression in Astrocytes by Activating Mitochondrial Antiviral-Signaling Protein Signaling Pathway Tian, Bin; Zhou, Ming; Yang, Yu; Yu, Lan; Luo, Zhaochen; Tian, Dayong; Wang, Ke; Cui, Min; Chen, Huanchun; Fu, Zhen F.; Zhao, Ling 2018 2018-01-19 COMM-USE N PMC5785723 29403485.0 10.3389/fimmu.2017.02011 6lzjhn8j 0.497793 Ban_J_2018, Dixit_2013, Lester_2014, Meyerson_2017
43 Kapil_2014 PKR mediated regulation of inflammation and IL-10 during viral encephalomyelitis Kapil, Parul; Stohlman, Stephen A.; Hinton, David R.; Bergmann, Cornelia C. 2014 2014-05-15 None N PMC4019976 24642385.0 10.1016/j.jneuroim.2014.02.012 umn83919 0.494821 Ban_J_2018, Swiecki_2010, Dixit_2013
44 Taylor_2018 CRISPR/Cas9 knockout of USP18 enhances type I IFN responsiveness and restricts HIV-1 infection in macrophages Taylor, Jared P.; Cash, Melanie N.; Santostefano, Katherine E.; Nakanishi, Mahito; Terada, Naohiro; Wallet, Mark A. 2018 2018-02-13 PMC N PMC6754309 29437254.0 10.1002/jlb.3mia0917-352r hi3i1mwl 0.493345 Ban_J_2018, Dixit_2013, Meyerson_2017, Martín-Vicente_2017
45 Oslund_2014 Synergistic Up-Regulation of CXCL10 by Virus and IFN γ in Human Airway Epithelial Cells Oslund, Karen L.; Zhou, Xu; Lee, Boram; Zhu, Lingxiang; Duong, Trang; Shih, Robert; Baumgarth, Nicole; Hung, Li-Yin; Wu, Reen; Chen, Yin 2014 2014-07-17 COMM-USE N PMC4102466 25033426.0 10.1371/journal.pone.0100978 c1uom5f7 0.493147 Ban_J_2018, Dixit_2013, Zhu_Z_2018, Zhang_2019, Taylor_2018 Carrero_2013, Skjesol_2009
46 Wang_2016 The nucleolar protein GLTSCR2 is required for efficient viral replication Wang, Peng; Meng, Wen; Han, Shi-Chong; Li, Cui-Cui; Wang, Xiao-Jun; Wang, Xiao-Jia 2016 2016-11-08 COMM-USE N PMC5099953 27824081.0 10.1038/srep36226 gag7fwa2 0.492714 Ban_J_2018, Meyerson_2017, Dixit_2013 Case_2017
47 Nguyen_2009 Drug Delivery–mediated Control of RNA Immunostimulation Nguyen, David N.; Chen, Steve C-Y; Lu, James; Goldberg, Michael; Kim, Phillip; Sprague, Andrew; Novobrantseva, Tatiana; Sherman, Jennifer; Shulga-Morskaya, Svetlana; de Fougerolles, Antonin; Chen, Jianzhu; Langer, Robert; Anderson, Daniel G 2009 2009-09-30 None N PMC2835254 19584813.0 10.1038/mt.2009.147 9gu8eo27 0.490860 Ban_J_2018, Meyerson_2017
48 Carnero_2014 Type I Interferon Regulates the Expression of Long Non-Coding RNAs Carnero, Elena; Barriocanal, Marina; Segura, Victor; Guruceaga, Elizabeth; Prior, Celia; Börner, Kathleen; Grimm, Dirk; Fortes, Puri 2014 2014-11-06 COMM-USE N PMC4222131 25414701.0 10.3389/fimmu.2014.00548 h0q1m3ed 0.489916 Barriocanal_2015, Cao_L_2019
49 Jiang_2016 CARMA3 is a host factor regulating the balance of inflammatory and antiviral responses against viral infection Jiang, Changying; Zhou, Zhicheng; Quan, Yanping; Zhang, Shilei; Wang, Tingting; Zhao, Xueqiang; Morrison, Clayton; Heise, Mark T.; He, Wenqian; Miller, Matthew S.; Lin, Xin 2016 2016-03-01 PMC N PMC5842788 26947079.0 10.1016/j.celrep.2016.02.031 bs4kpy12 0.486787 Ban_J_2018, Dixit_2013, Meyerson_2017 Maelfait_2012
50 Züst_2011 Ribose 2′-O-methylation provides a molecular signature for the distinction of self and non-self mRNA dependent on the RNA sensor Mda5 Züst, Roland; Cervantes-Barragan, Luisa; Habjan, Matthias; Maier, Reinhard; Neuman, Benjamin W; Ziebuhr, John; Szretter, Kristy J; Baker, Susan C; Barchet, Winfried; Diamond, Michael S; Siddell, Stuart G; Ludewig, Burkhard; Thiel, Volker 2011 2011-01-09 None N PMC3182538 21217758.0 10.1038/ni.1979 2d0tk1cm 0.484136 Meyerson_2017 Daffis_2010
51 Deal_2010 Rotavirus Structural Proteins and dsRNA Are Required for the Human Primary Plasmacytoid Dendritic Cell IFNα Response Deal, Emily M.; Jaimes, Maria C.; Crawford, Sue E.; Estes, Mary K.; Greenberg, Harry B. 2010 2010-06-03 COMM-USE N PMC2880586 20532161.0 10.1371/journal.ppat.1000931 waf4n6u8 0.482385 Swiecki_2010, Ban_J_2018 Uzri_2013, Sedeyn_2019, Chen_2019, Ding_2018
52 Menachery_2014 Pathogenic Influenza Viruses and Coronaviruses Utilize Similar and Contrasting Approaches To Control Interferon-Stimulated Gene Responses Menachery, Vineet D.; Eisfeld, Amie J.; Schäfer, Alexandra; Josset, Laurence; Sims, Amy C.; Proll, Sean; Fan, Shufang; Li, Chengjun; Neumann, Gabriele; Tilton, Susan C.; Chang, Jean; Gralinski, Lisa E.; Long, Casey; Green, Richard; Williams, Christopher M.; Weiss, Jeffrey; Matzke, Melissa M.; Webb-Robertson, Bobbie-Jo; Schepmoes, Athena A.; Shukla, Anil K.; Metz, Thomas O.; Smith, Richard D.; Waters, Katrina M.; Katze, Michael G.; Kawaoka, Yoshihiro; Baric, Ralph S. 2014 2014-05-20 NONCOMM N PMC4030454 24846384.0 10.1128/mbio.01174-14 s3zeppze 0.482145
53 Li_L_2019 IFN-Lambda 3 Mediates Antiviral Protection Against Porcine Epidemic Diarrhea Virus by Inducing a Distinct Antiviral Transcript Profile in Porcine Intestinal Epithelia Li, Liang; Xue, Mei; Fu, Fang; Yin, Lingdan; Feng, Li; Liu, Pinghuang 2019 2019-10-17 COMM-USE N PMC6811514 31681286.0 10.3389/fimmu.2019.02394 86ksgl5t 0.481162 Ban_J_2018 Chen_2019, Lee_S_2004
54 Arslan_2019 Dynamic Expression of Interferon Lambda Regulated Genes in Primary Fibroblasts and Immune Organs of the Chicken Arslan, Mehboob; Yang, Xin; Santhakumar, Diwakar; Liu, Xingjian; Hu, Xiaoyuan; Munir, Muhammad; Li, Yinü; Zhang, Zhifang 2019 2019-02-14 COMM-USE N PMC6409627 30769908.0 10.3390/genes10020145 yyzbv7ys 0.478295 Lester_2014 Read_2019
55 Ishibashi_2019 Type I interferon protects neurons from prions in in vivo models Ishibashi, Daisuke; Homma, Takujiro; Nakagaki, Takehiro; Fuse, Takayuki; Sano, Kazunori; Satoh, Katsuya; Mori, Tsuyoshi; Atarashi, Ryuichiro; Nishida, Noriyuki 2019 2019-02-07 NONCOMM N PMC6439327 30753318.0 10.1093/brain/awz016 zopwlaq4 0.477135 Ban_J_2018, Dixit_2013, Martín-Vicente_2017, Lester_2014 Chen_2019
56 Chen_2017 Avian Interferon-Inducible Transmembrane Protein Family Effectively Restricts Avian Tembusu Virus Infection Chen, Shilong; Wang, Long; Chen, Jieying; Zhang, Lanlan; Wang, Song; Goraya, Mohsan U.; Chi, Xiaojuan; Na, Yang; Shao, Wenhan; Yang, Zhou; Zeng, Xiancheng; Chen, Shaoying; Chen, Ji-Long 2017 2017-04-20 COMM-USE N PMC5397487 28473814.0 10.3389/fmicb.2017.00672 0pjg25kn 0.475499 Ban_J_2018, Zhu_Z_2018 Chen_2019
57 Sui_C_2019 CRISPR-Cas9 Mediated RNase L Knockout Regulates Cellular Function of PK-15 Cells and Increases PRV Replication Sui, Chao; Jiang, Dandan; Wu, Xiangju; Cong, Xiaoyan; Li, Feng; Shang, Yingli; Wang, Jinqiu; Liu, Sidang; Shan, Hu; Qi, Jing; Du, Yijun 2019 2019-03-03 COMM-USE N PMC6421005 30941371.0 10.1155/2019/7398208 f7n4cyq2 0.472510 Meyerson_2017, Ban_J_2018
58 Li_Y_2019 Activation of RNase L in Egyptian Rousette Bat-Derived RoNi/7 Cells Is Dependent Primarily on OAS3 and Independent of MAVS Signaling Li, Yize; Dong, Beihua; Wei, Zuzhang; Silverman, Robert H.; Weiss, Susan R. 2019 2019-11-12 COMM-USE N PMC6851283 31719180.0 10.1128/mbio.02414-19 pkovyjo6 0.467224 Meyerson_2017, Ban_J_2018 Jha_B_2012, Zhao_2012, Case_2017
59 Ouyang_2014 NRAV, a Long Noncoding RNA, Modulates Antiviral Responses through Suppression of Interferon-Stimulated Gene Transcription Ouyang, Jing; Zhu, Xiaomei; Chen, Yuhai; Wei, Haitao; Chen, Qinghuang; Chi, Xiaojuan; Qi, Baomin; Zhang, Lianfeng; Zhao, Yi; Gao, George Fu; Wang, Guoshun; Chen, Ji-Long 2014 2014-11-12 None N PMC7104942 25525793.0 10.1016/j.chom.2014.10.001 34coud2g 0.466994 Ban_J_2018, Dixit_2013 Lai_C_2019
60 Kane_2016 Identification of Interferon-Stimulated Genes with Antiretroviral Activity Kane, Melissa; Zang, Trinity M.; Rihn, Suzannah J.; Zhang, Fengwen; Kueck, Tonya; Alim, Mudathir; Schoggins, John; Rice, Charles M.; Wilson, Sam J.; Bieniasz, Paul D. 2016 2016-09-14 None N PMC5026698 27631702.0 10.1016/j.chom.2016.08.005 oyz36v2b 0.464968 Schoggins_2011, Ban_J_2018, Dixit_2013 Egli_2014, Sidhu_1996
61 Berger_Rentsch_2011 A Vesicular Stomatitis Virus Replicon-Based Bioassay for the Rapid and Sensitive Determination of Multi-Species Type I Interferon Berger Rentsch, Marianne; Zimmer, Gert 2011 2011-10-05 COMM-USE N PMC3187809 21998709.0 10.1371/journal.pone.0025858 a8rkvaax 0.464259 Ban_J_2018, Meyerson_2017
62 Wu_N_2019 The interferon stimulated gene 20 protein (ISG20) is an innate defense antiviral factor that discriminates self versus non-self translation Wu, Nannan; Nguyen, Xuan-Nhi; Wang, Li; Appourchaux, Romain; Zhang, Chengfei; Panthu, Baptiste; Gruffat, Henri; Journo, Chloé; Alais, Sandrine; Qin, Juliang; Zhang, Na; Tartour, Kevin; Catez, Frédéric; Mahieux, Renaud; Ohlmann, Theophile; Liu, Mingyao; Du, Bing; Cimarelli, Andrea 2019 2019-10-10 COMM-USE N PMC6805002 31600344.0 10.1371/journal.ppat.1008093 qu4zin3o 0.464236 Meyerson_2017, Ban_J_2018 Case_2017
63 Hasan_2012 Trex1 regulates lysosomal biogenesis and interferon-independent activation of antiviral genes Hasan, Maroof; Koch, James; Rakheja, Dinesh; Pattnaik, Asit K.; Brugarolas, James; Dozmorov, Igor; Levine, Beth; Wakeland, Edward K.; Lee-kirsch, Min Ae; Yan, Nan 2012 2012-11-18 PMC N PMC3522772 23160154.0 10.1038/ni.2475 qxjibrab 0.463913 Dixit_2013, Ban_J_2018, Martín-Vicente_2017, Liu_Y_2017 Ezelle_2016, Cao_L_2019
64 Colavita_2018 ZIKV Infection Induces an Inflammatory Response but Fails to Activate Types I, II, and III IFN Response in Human PBMC Colavita, Francesca; Bordoni, Veronica; Caglioti, Claudia; Biava, Mirella; Castilletti, Concetta; Bordi, Licia; Quartu, Serena; Iannetta, Marco; Ippolito, Giuseppe; Agrati, Chiara; Capobianchi, Maria Rosaria; Lalle, Eleonora 2018 2018-06-03 COMM-USE N PMC6008743 29967565.0 10.1155/2018/2450540 srk7b83b 0.462904 Swiecki_2010, Lester_2014, Dixit_2013 Chen_2019, Carrero_2013
65 Aguirre_2012 DENV Inhibits Type I IFN Production in Infected Cells by Cleaving Human STING Aguirre, Sebastian; Maestre, Ana M.; Pagni, Sarah; Patel, Jenish R.; Savage, Timothy; Gutman, Delia; Maringer, Kevin; Bernal-Rubio, Dabeiba; Shabman, Reed S.; Simon, Viviana; Rodriguez-Madoz, Juan R.; Mulder, Lubbertus C. F.; Barber, Glen N.; Fernandez-Sesma, Ana 2012 2012-10-04 COMM-USE N PMC3464218 23055924.0 10.1371/journal.ppat.1002934 m4t7jwqe 0.462264 Ban_J_2018, Meyerson_2017, Dixit_2013 Chen_2019, Carrero_2013
66 Chang_2016 Evasion of early innate immune response by 2′-O-methylation of dengue genomic RNA Chang, David C.; Hoang, Long T.; Mohamed Naim, Ahmad Nazri; Dong, Hongping; Schreiber, Mark J.; Hibberd, Martin L.; Tan, Min Jie Alvin; Shi, Pei-Yong 2016 2016-12-31 PMC N 27716465.0 10.1016/j.virol.2016.09.022 iczcqhbp 0.461844
67 Kreit_2015 The Interferon-Inducible Mouse Apolipoprotein L9 and Prohibitins Cooperate to Restrict Theiler’s Virus Replication Kreit, Marguerite; Vertommen, Didier; Gillet, Laurent; Michiels, Thomas 2015 2015-07-21 COMM-USE N PMC4510265 26196674.0 10.1371/journal.pone.0133190 xvc2154y 0.461702 Ban_J_2018, Meyerson_2017 Sidhu_1996, Case_2017
68 Bedford_2019 Rapid interferon independent expression of IFITM3 following T cell activation protects cells from influenza virus infection Bedford, James G.; O’Keeffe, Meredith; Reading, Patrick C.; Wakim, Linda M. 2019 2019-01-16 COMM-USE N PMC6334895 30650117.0 10.1371/journal.pone.0210132 tdkvlbyz 0.460257 Ban_J_2018, Dixit_2013, Swiecki_2010 Carrero_2013
69 Ayithan_2015 Virus-Like Particles Activate Type I Interferon Pathways to Facilitate Post-Exposure Protection against Ebola Virus Infection Ayithan, Natarajan; Bradfute, Steven B.; Anthony, Scott M.; Stuthman, Kelly S.; Bavari, Sina; Bray, Mike; Ozato, Keiko 2015 2015-02-26 COMM-USE N PMC4342244 25719445.0 10.1371/journal.pone.0118345 ndz3oarf 0.454651 Ban_J_2018, Swiecki_2010 Chen_2019
70 Werneke_2011 ISG15 Is Critical in the Control of Chikungunya Virus Infection Independent of UbE1L Mediated Conjugation Werneke, Scott W.; Schilte, Clementine; Rohatgi, Anjali; Monte, Kristen J.; Michault, Alain; Arenzana-Seisdedos, Fernando; Vanlandingham, Dana L.; Higgs, Stephen; Fontanet, Arnaud; Albert, Matthew L.; Lenschow, Deborah J. 2011 2011-10-20 COMM-USE N PMC3197620 22028657.0 10.1371/journal.ppat.1002322 r46uokh1 0.453447 Ban_J_2018, Mao_J_2019, Bermejo-Jambrina_2018
71 Goswami_2004 Apoptosis induced by a cytopathic hepatitis A virus is dependent on caspase activation following ribosomal RNA degradation but occurs in the absence of 2′–5′ oligoadenylate synthetase Goswami, Biswendu B.; Kulka, Michael; Ngo, Diana; Cebula, Thomas A. 2004 2004-09-30 PMC N PMC7127220 15451183.0 10.1016/j.antiviral.2004.02.004 xemarhlv 0.452475 Meyerson_2017, Ban_J_2018
72 Ashour_2010 Mouse STAT2 Restricts Early Dengue Virus Replication Ashour, Joseph; Morrison, Juliet; Laurent-Rolle, Maudry; Belicha-Villanueva, Alan; Plumlee, Courtney Ray; Bernal-Rubio, Dabeiba; Williams, Kate; Harris, Eva; Fernandez-Sesma, Ana; Schindler, Christian; García-Sastre, Adolfo 2010 2010-11-01 PMC N PMC3310429 21075352.0 10.1016/j.chom.2010.10.007 d7rmcf4i 0.449096 Ban_J_2018, Meyerson_2017 Case_2017, Zhao_2012
73 Patel_2012 High Throughput Screening for Small Molecule Enhancers of the Interferon Signaling Pathway to Drive Next-Generation Antiviral Drug Discovery Patel, Dhara A.; Patel, Anand C.; Nolan, William C.; Zhang, Yong; Holtzman, Michael J. 2012 2012-05-04 COMM-USE N PMC3344904 22574190.0 10.1371/journal.pone.0036594 o6znx8t8 0.449037 Schoggins_2011
74 Li_L_2015 Host miR-26a suppresses replication of porcine reproductive and respiratory syndrome virus by upregulating type I interferons Li, Liwei; Wei, Zuzhang; Zhou, Yanjun; Gao, Fei; Jiang, Yifeng; Yu, Lingxue; Zheng, Hao; Tong, Wu; Yang, Shen; Zheng, Haihong; Shan, Tongling; Liu, Fei; Xia, Tianqi; Tong, Guangzhi 2015 2015-01-02 PMC N PMC7114497 25218480.0 10.1016/j.virusres.2014.08.012 qkjjxr6p 0.448081 Ban_J_2018, Meyerson_2017 Zhang_2019
75 Rose_2009 Murine Coronavirus Cell Type Dependent Interaction with the Type I Interferon Response Rose, Kristine M.; Weiss, Susan R. 2009 2009-11-04 COMM-USE N PMC2835314 20221421.0 10.3390/v1030689 dqwvf6kv 0.443902 Dixit_2013, Lester_2014, Swiecki_2010, Ban_J_2018 Chen_2019, Carrero_2013
76 Kang_2015 Antiviral effects of Lactobacillus ruminis SPM0211 and Bifidobacterium longum SPM1205 and SPM1206 on rotavirus-infected Caco-2 cells and a neonatal mouse model Kang, Joo Yeon; Lee, Do Kyung; Ha, Nam Joo; Shin, Hea Soon 2015 2015-10-28 PMC N PMC7090939 26502964.0 10.1007/s12275-015-5302-2 zid0rc95 0.441000 Ban_J_2018, Barber_2013
77 Zhang_2006 Hyper-activated IRF-1 and STAT1 contribute to enhanced Interferon stimulated gene (ISG) expression by Interferon α and γ co-treatment in human hepatoma cells Zhang, Xiao-Nan; Liu, Jiang-Xia; Hu, Yun-Wen; Chen, Hui; Yuan, Zheng-Hong 2006 2006-09-30 PMC N PMC7148893 16987558.0 10.1016/j.bbaexp.2006.08.003 8txogxek 0.436318 Ban_J_2018, Zhu_Z_2018, Meyerson_2017
78 Schoggins_2014 Interferon-stimulated genes: roles in viral pathogenesis Schoggins, John W 2014 2014-06-30 None N PMC4077717 24713352.0 10.1016/j.coviro.2014.03.006 odrigwlz 0.433807 Wang_2017, Carrero_2013
79 Sainz_2005 Synergistic inhibition of human cytomegalovirus replication by interferon-alpha/beta and interferon-gamma Sainz, Bruno; LaMarca, Heather L; Garry, Robert F; Morris, Cindy A 2005 2005-02-23 COMM-USE N PMC554982 15727684.0 10.1186/1743-422x-2-14 m9rg6d3w 0.426724 Ban_J_2018, Meyerson_2017, Zhu_Z_2018 Sidhu_1996, Carrero_2013
80 Wang_2019 Porcine IFITM1 is a host restriction factor that inhibits pseudorabies virus infection Wang, Jiang; Wang, Chun-Feng; Ming, Sheng-Li; Li, Guo-Li; Zeng, Lei; Wang, Meng-Di; Su, Bing-Qian; Wang, Qi; Yang, Guo-Yu; Chu, Bei-Bei 2019 2019-11-16 PMC N 31743714.0 10.1016/j.ijbiomac.2019.10.162 e2x3tazo 0.426340 Ban_J_2018 Chen_2019
81 Sorgeloos_2013 Evasion of Antiviral Innate Immunity by Theiler's Virus L* Protein through Direct Inhibition of RNase L Sorgeloos, Frédéric; Jha, Babal Kant; Silverman, Robert H.; Michiels, Thomas 2013 2013-06-27 COMM-USE N PMC3694852 23825954.0 10.1371/journal.ppat.1003474 f0t5e46j 0.425812 Meyerson_2017, Ban_J_2018, Li_C_2017 Zhao_2012, Jha_B_2012
82 Parker_2018 Innate Immune Priming by cGAS as a Preparatory Countermeasure Against RNA Virus Infection Michael T. Parker; Smita Gopinath; Corey E. Perez; Melissa M. Linehan; Jason M. Crawford; Akiko Iwasaki; Brett D. Lindenbach 2018 2018-10-03 BioRxiv N 10.1101/434027 j1gkl43g 0.425214 Meyerson_2017, Ban_J_2018 Schlee_2013, Case_2017
83 Zhu_L_2017 Transmissible gastroenteritis virus does not suppress IFN-β induction but is sensitive to IFN in IPEC-J2 cells Zhu, Liqi; Yang, Xing; Mou, Chunxiao; Yang, Qian 2017 2017-02-28 PMC N PMC7117263 28110779.0 10.1016/j.vetmic.2016.12.031 zh0zn5rx 0.424835 Ban_J_2018, Dixit_2013, Swiecki_2010 Chen_2019, Skjesol_2009, Carrero_2013
84 Wang_2020 BRD4 inhibition exerts anti-viral activity through DNA damage-dependent innate immune responses Wang, Jiang; Li, Guo-Li; Ming, Sheng-Li; Wang, Chun-Feng; Shi, Li-Juan; Su, Bing-Qian; Wu, Hong-Tao; Zeng, Lei; Han, Ying-Qian; Liu, Zhong-Hu; Jiang, Da-Wei; Du, Yong-Kun; Li, Xiang-Dong; Zhang, Gai-Ping; Yang, Guo-Yu; Chu, Bei-Bei 2020 2020-03-24 COMM-USE N PMC7122826 32208449.0 10.1371/journal.ppat.1008429 vo80sp6p 0.422580 Ban_J_2018, Meyerson_2017
85 Fujii_2010 Functional analysis of Rousettus aegyptiacus “signal transducer and activator of transcription 1” (STAT1) Fujii, Hikaru; Watanabe, Shumpei; Yamane, Daisuke; Ueda, Naoya; Iha, Koichiro; Taniguchi, Satoshi; Kato, Kentaro; Tohya, Yukinobu; Kyuwa, Shigeru; Yoshikawa, Yasuhiro; Akashi, Hiroomi 2010 2010-05-31 PMC N PMC7103214 20067804.0 10.1016/j.dci.2010.01.004 oi22n113 0.421396 Ban_J_2018, Meyerson_2017 Sidhu_1996, Case_2017
86 Li_C_2020 Duck karyopherin α4 (duKPNA4) is involved in type I interferon expression and the antiviral response against Japanese encephalitis virus Li, Chenxi; Di, Di; Wang, Xin; Xia, Qiqi; Wahaab, Abdul; Anwar, Muhammad Naveed; Li, Zongjie; Liu, Ke; Shao, Donghua; Qiu, Yafeng; Wei, Jianchao; Li, Beibei; Ma, Zhiyong 2020 2020-03-31 PMC N PMC7102526 31697956.0 10.1016/j.dci.2019.103535 oyhzn2kc 0.420103 Ban_J_2018, Meyerson_2017, Zhu_Z_2018
87 Wong_2009 Activation of toll-like receptor signaling pathway for protection against influenza virus infection Wong, J.P.; Christopher, M.E.; Viswanathan, S.; Karpoff, N.; Dai, X.; Das, D.; Sun, L.Q.; Wang, M.; Salazar, A.M. 2009 2009-05-26 PMC N PMC7115520 19200852.0 10.1016/j.vaccine.2009.01.048 87l6nixc 0.417649 Ban_J_2018 Mazaleuskaya_2012, Carrero_2013
88 Madera_2016 Type I IFN promotes NK cell expansion during viral infection by protecting NK cells against fratricide Madera, Sharline; Rapp, Moritz; Firth, Matthew A.; Beilke, Joshua N.; Lanier, Lewis L.; Sun, Joseph C. 2016 2016-02-08 NONCOMM N PMC4749923 26755706.0 10.1084/jem.20150712 qkdni38b 0.417089 Swiecki_2010 Carrero_2013, Mack_2011, Maelfait_2012
89 Skjesol_2009 The interplay between infectious pancreatic necrosis virus (IPNV) and the IFN system: IFN signaling is inhibited by IPNV infection Skjesol, Astrid; Aamo, Toril; Hegseth, Marit Nøst; Robertsen, Børre; Jørgensen, Jorunn B. 2009 2009-07-31 PMC N PMC7114382 19463721.0 10.1016/j.virusres.2009.03.004 jd0nmdpo 0.414786 Meyerson_2017, Ban_J_2018 Chen_2019, Carrero_2013
90 Zhang_2012 Porcine reproductive and respiratory syndrome virus activates the transcription of interferon alpha/beta (IFN-α/β) in monocyte-derived dendritic cells (Mo-DC) Zhang, Hanmo; Guo, Xueshui; Nelson, Eric; Christopher-Hennings, Jane; Wang, Xiuqing 2012 2012-10-12 PMC N PMC7127654 22592217.0 10.1016/j.vetmic.2012.04.025 l2vvfro3 0.412415 Ban_J_2018, Meyerson_2017, Li_C_2017 Lee_S_2004
91 Cruz-Rivera_2017 The IFN response in bat cells consists of canonical and non-canonical ISGs with unique temporal expression kinetics Pamela C. De La Cruz-Rivera; Mohammed Kanchwala; Hanquan Liang; Ashwani Kumar; Lin-Fa Wang; Chao Xing; John W. Schoggins 2017 2017-07-24 BioRxiv N 10.1101/167999 yqa7ggqg 0.412098 Lester_2014 Zhou_2011
92 Chang_2009 Human Cytomegalovirus Suppresses Type I Interferon Secretion by Plasmacytoid Dendritic Cells through Its Interleukin 10 Homolog Chang, W. L. William; Barry, Peter A.; Szubin, Richard; Wang, Dai; Baumgarth, Nicole 2009 2009-08-01 PMC N PMC2747589 19524994.0 10.1016/j.virol.2009.05.013 xpwl9sxy 0.411402 Swiecki_2010, Dixit_2013, Ban_J_2018 Chen_2019, Carrero_2013, Sainz_2005
93 Sridharan_2010 Age-associated impaired plasmacytoid dendritic cell functions lead to decreased CD4 and CD8 T cell immunity Sridharan, Aishwarya; Esposo, Marc; Kaushal, Khushboo; Tay, Jia; Osann, Kathyrn; Agrawal, Sudhanshu; Gupta, Sudhir; Agrawal, Anshu 2010 2010-10-16 PMC N PMC3168606 20953722.0 10.1007/s11357-010-9191-3 mkoeoaug 0.406837 Maelfait_2012
94 Carlin_2017 An IRF-3, -5, -7-independent pathway of dengue viral resistance utilizes IRF-1 to stimulate type I and II interferon responses Carlin, Aaron F.; Plummer, Emily M.; Vizcarra, Edward A.; Sheets, Nicholas; Joo, Yunichel; Tang, William; Day, Jeremy; Greenbaum, Jay; Glass, Christopher K.; Diamond, Michael S.; Shresta, Sujan 2017 2017-11-01 PMC N PMC5696617 29117564.0 10.1016/j.celrep.2017.10.054 rtzkdfry 0.404780 Dixit_2013, Ban_J_2018, Zhu_Z_2018, Swiecki_2010
95 Megger_2017 Deciphering of the Human Interferon-Regulated Proteome by Mass Spectrometry-Based Quantitative Analysis Reveals Extent and Dynamics of Protein Induction and Repression Megger, Dominik A.; Philipp, Jos; Le-Trilling, Vu Thuy Khanh; Sitek, Barbara; Trilling, Mirko 2017 2017-09-14 COMM-USE N PMC5603615 28959263.0 10.3389/fimmu.2017.01139 t68otlu7 0.404397 Lee_W_2013
96 Zhang_2018 IFN-stimulated P2Y(13) protects mice from viral infection by suppressing the cAMP/EPAC1 signaling pathway Zhang, Chengfei; Yan, Yan; He, Hongwang; Wang, Li; Zhang, Na; Zhang, Jie; Huang, Hongjun; Wu, Nannan; Ren, Hua; Qian, Min; Liu, Mingyao; Du, Bing 2018 2018-08-22 PMC N PMC7107496 30137373.0 10.1093/jmcb/mjy045 yd7idp90 0.401282 Ban_J_2018, Bermejo-Jambrina_2018 Sidhu_1996, Chen_2019
97 Lee_W_2019 OAS1 and OAS3 negatively regulate the expression of chemokines and interferon-responsive genes in human macrophages Lee, Wook-Bin; Choi, Won Young; Lee, Dong-Hyun; Shim, Hyeran; Kim-Ha, Jeongsil; Kim, Young-Joon 2019 2019-02-28 NONCOMM N PMC6443328 30078389.0 10.5483/bmbrep.2019.52.2.129 c9ljml1a 0.399641 Ban_J_2018, Dixit_2013, Meyerson_2017, Zhu_Z_2018 Jha_B_2012
98 Li_L_2020 TRIM62 From Chicken as a Negative Regulator of Reticuloendotheliosis Virus Replication Li, Ling; Niu, Dongyan; Yang, Jie; Bi, Jianmin; Zhang, Lingjuan; Cheng, Ziqiang; Wang, Guihua 2020 2020-04-03 COMM-USE N PMC7146716 10.3389/fvets.2020.00152 uxir9jzw 0.399641 Ban_J_2018
99 Reich_2013 A Death-Promoting Role for ISG54/IFIT2 Reich, Nancy C. 2013 2013-04-01 PMC N PMC3624773 23570386.0 10.1089/jir.2012.0159 c1fzx7if 0.399565 Ban_J_2018, Dixit_2013, Martín-Vicente_2017 Sidhu_1996, Lenschow_2010, Peteranderl_2017
100 Suthar_2010 IPS-1 Is Essential for the Control of West Nile Virus Infection and Immunity Suthar, Mehul S.; Ma, Daphne Y.; Thomas, Sunil; Lund, Jennifer M.; Zhang, Nu; Daffis, Stephane; Rudensky, Alexander Y.; Bevan, Michael J.; Clark, Edward A.; Kaja, Murali-Krishna; Diamond, Michael S.; Gale, Michael 2010 2010-02-05 COMM-USE N PMC2816698 20140199.0 10.1371/journal.ppat.1000757 094d0rn6 0.398615 Dixit_2013, Swiecki_2010, Lester_2014, Ban_J_2018 Case_2017
101 Abdul-Cader_2019 Single stranded (ss)RNA-mediated antiviral response against infectious laryngotracheitis virus infection Abdul-Cader, Mohamed Sarjoon; De Silva Senapathi, Upasama; Ahmed-Hassan, Hanaa; Sharif, Shayan; Abdul-Careem, Mohamed Faizal 2019 2019-02-08 COMM-USE N PMC6368756 30736730.0 10.1186/s12866-019-1398-6 qxv0ua4l 0.398341 Dixit_2013, Swiecki_2010, Ban_J_2018, van_der_Sluijs_2003 Chen_2019, Sedeyn_2019
102 Banerjee_2019 Interferon Regulatory Factor 3-Mediated Signaling Limits Middle-East Respiratory Syndrome (MERS) Coronavirus Propagation in Cells from an Insectivorous Bat Banerjee, Arinjay; Falzarano, Darryl; Rapin, Noreen; Lew, Jocelyne; Misra, Vikram 2019 2019-02-13 COMM-USE N PMC6410008 30781790.0 10.3390/v11020152 2szqovw4 0.398285 Ban_J_2018, Meyerson_2017, Dixit_2013, Barber_2013 Lui_P_2016, Chen_2019, Rabouw_2016
103 Lokugamage_2020 SARS-CoV-2 is sensitive to type I interferon pretreatment Kumari G. Lokugamage; Adam Hage; Craig Schindewolf; Ricardo Rajsbaum; Vineet D. Menachery 2020 2020-03-09 BioRxiv Y 10.1101/2020.03.07.982264 2w0zr9c0 0.397739 Ban_J_2018, Ashour_2010
104 Li_J_2015 Molecular characterization of RIG-I, STAT-1 and IFN-beta in the horseshoe bat Li, Jinju; Zhang, Guangxu; Cheng, Dalong; Ren, Hua; Qian, Min; Du, Bing 2015 2015-04-25 PMC N PMC7127221 25680291.0 10.1016/j.gene.2015.02.013 3pqxj1z0 0.395687 Ban_J_2018, Barber_2013 Sidhu_1996
105 Woo_H_2019 Recovery of TRIM25-Mediated RIG-I Ubiquitination through Suppression of NS1 by RNA Aptamers Woo, Hye-Min; Lee, Jin-Moo; Kim, Chul-Joong; Lee, Jong-Soo; Jeong, Yong-Joo 2019 2019-10-10 None N PMC6821451 31600868.0 10.14348/molcells.2019.0157 8ukqvjmq 0.390327 Ban_J_2018, Meyerson_2017
106 Zhou_2010 Autocrine Interferon Priming in Macrophages but Not Dendritic Cells Results in Enhanced Cytokine and Chemokine Production after Coronavirus Infection Zhou, Haixia; Zhao, Jincun; Perlman, Stanley 2010 2010-10-19 NONCOMM N PMC2957079 20978536.0 10.1128/mbio.00219-10 qg541qho 0.389610 Swiecki_2010 Read_2019, Solodova_2011, Seeds_2011
107 Feng_2012 MDA5 Detects the Double-Stranded RNA Replicative Form in Picornavirus-Infected Cells Feng, Qian; Hato, Stanleyson V.; Langereis, Martijn A.; Zoll, Jan; Virgen-Slane, Richard; Peisley, Alys; Hur, Sun; Semler, Bert L.; van Rij, Ronald P.; van Kuppeveld, Frank J.M. 2012 2012-11-29 None N PMC7103987 23142662.0 10.1016/j.celrep.2012.10.005 6cci17lk 0.387058 Meyerson_2017
108 Tapia_2013 Defective Viral Genomes Arising In Vivo Provide Critical Danger Signals for the Triggering of Lung Antiviral Immunity Tapia, Karla; Kim, Won-keun; Sun, Yan; Mercado-López, Xiomara; Dunay, Emily; Wise, Megan; Adu, Michael; López, Carolina B. 2013 2013-10-31 COMM-USE N PMC3814336 24204261.0 10.1371/journal.ppat.1003703 xs7df6a7 0.386769 Dixit_2013, Ban_J_2018, Swiecki_2010 Carrero_2013
109 Krześniak_2020 Synergistic activation of p53 by actinomycin D and nutlin-3a is associated with the upregulation of crucial regulators and effectors of innate immunity Krześniak, Małgorzata; Zajkowicz, Artur; Gdowicz-Kłosok, Agnieszka; Głowala-Kosińska, Magdalena; Łasut-Szyszka, Barbara; Rusin, Marek 2020 2020-05-31 PMC N PMC7126238 32032660.0 10.1016/j.cellsig.2020.109552 z0a9ghc0 0.386358 Ban_J_2018 Reich_2013
110 Mottahedin_2012 NF-κB activation by equine arteritis virus is MyD88 dependent and promotes viral replication Mottahedin, Amin; Paidikondala, Maruthibabu; Cholleti, Harindranath; Baule, Claudia 2012 2012-11-15 PMC N PMC7086945 23151818.0 10.1007/s00705-012-1515-4 aq2l72l0 0.385734 Ban_J_2018
111 Uematsu_2015 Loss of CARD9-mediated innate activation attenuates severe influenza pneumonia without compromising host viral immunity Uematsu, Takayuki; Iizasa, Ei’ichi; Kobayashi, Noritada; Yoshida, Hiroki; Hara, Hiromitsu 2015 2015-12-02 COMM-USE N PMC4667252 26627732.0 10.1038/srep17577 utsvsja0 0.384111 Ban_J_2018, Dixit_2013, Lester_2014, Mao_J_2019 Maelfait_2012, Carrero_2013
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130 Su_Q_2018 IFN‐λ4 inhibits HIV infection of macrophages through signalling of IFN‐λR1/IL‐10R2 receptor complex Su, Qi‐Jian; Wang, Xu; Zhou, Run‐Hong; Guo, Le; Liu, Hang; Li, Jie‐Liang; Ho, Wen‐Zhe 2018 2018-10-10 PMC N PMC6286684 30247785.0 10.1111/sji.12717 6w5hpziw 0.365386 Ban_J_2018, Li_C_2017
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132 He_X_2014 Establishment of Myotis myotis Cell Lines - Model for Investigation of Host-Pathogen Interaction in a Natural Host for Emerging Viruses He, Xiaocui; Korytář, Tomáš; Zhu, Yaqing; Pikula, Jiří; Bandouchova, Hana; Zukal, Jan; Köllner, Bernd 2014 2014-10-08 COMM-USE N PMC4190323 25295526.0 10.1371/journal.pone.0109795 njpuc475 0.364029 Lester_2014, Bermejo-Jambrina_2018
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134 Yang_2013 Proteomic analysis for Type I interferon antagonism of Japanese encephalitis virus NS5 protein Yang, Tsuey‐Ching; Li, Shih‐Wein; Lai, Chien‐Chen; Lu, Kai‐Zen; Chiu, Man‐Tzu; Hsieh, Tsung‐Han; Wan, Lei; Lin, Cheng‐Wen 2013 2013-12-02 PMC N PMC7167617 24166946.0 10.1002/pmic.201300001 bndwr8cm 0.359605 Ban_J_2018, Meyerson_2017, Zhu_Z_2018, Dixit_2013
135 Hölzer_2019 Virus- and Interferon Alpha-Induced Transcriptomes of Cells from the Microbat Myotis daubentonii Hölzer, Martin; Schoen, Andreas; Wulle, Julia; Müller, Marcel A.; Drosten, Christian; Marz, Manja; Weber, Friedemann 2019 2019-08-10 None N PMC6718828 31465999.0 10.1016/j.isci.2019.08.016 0co6m9af 0.358201 Ban_J_2018, Mar_K_2018 Sidhu_1996, Chen_2019
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139 Douam_2017 Type III Interferon-Mediated Signaling Is Critical for Controlling Live Attenuated Yellow Fever Virus Infection In Vivo Douam, Florian; Soto Albrecht, Yentli E.; Hrebikova, Gabriela; Sadimin, Evita; Davidson, Christian; Kotenko, Sergei V.; Ploss, Alexander 2017 2017-08-15 COMM-USE N PMC5559630 28811340.0 10.1128/mbio.00819-17 jlb0hwrg 0.354007 Ban_J_2018, Dixit_2013, Swiecki_2010 Chen_2019, Carrero_2013
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141 Patil_2020 TRIM41-Mediated Ubiquitination of Nucleoprotein Limits Vesicular Stomatitis Virus Infection Patil, Girish; Xu, Lingling; Wu, Yakun; Song, Kun; Hao, Wenzhuo; Hua, Fang; Wang, Lingyan; Li, Shitao 2020 2020-01-22 COMM-USE N PMC7077221 31979016.0 10.3390/v12020131 jlib9v5j 0.351525 Meyerson_2017, Ban_J_2018 Case_2017, van_Tol_2017
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155 Liu_S_2015 Poxvirus Decapping Enzymes Enhance Virulence by Preventing the Accumulation of dsRNA and the Induction of Innate Antiviral Responses Liu, Shin-Wu; Katsafanas, George C.; Liu, Ruikang; Wyatt, Linda S.; Moss, Bernard 2015 2015-03-01 PMC N PMC4359750 25766293.0 10.1016/j.chom.2015.02.002 fyq96v9b 0.334999 Meyerson_2017, Ban_J_2018 Clavarino_2012
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170 Huang_2014 MAVS-MKK7-JNK2 Defines a Novel Apoptotic Signaling Pathway during Viral Infection Huang, Yuefeng; Liu, Heng; Li, Senlin; Tang, Yijun; Wei, Bo; Yu, Huansha; Wang, Chen 2014 2014-03-20 COMM-USE N PMC3961361 24651600.0 10.1371/journal.ppat.1004020 6yto9emz 0.320401 Ban_J_2018 Lei_Y_2009, Robitaille_2017
171 Kumari_2017 Essential role of HCMV deubiquitinase in promoting oncogenesis by targeting anti-viral innate immune signaling pathways Kumari, Puja; Saha, Irene; Narayanan, Athira; Narayanan, Sathish; Takaoka, Akinori; Kumar, Nachimuthu Senthil; Tailor, Prafullakumar; Kumar, Himanshu 2017 2017-10-05 COMM-USE N PMC5680583 28981114.0 10.1038/cddis.2017.461 f89s8pgd 0.320065 Ban_J_2018, Martín-Vicente_2017, Dixit_2013
172 Zhao_2012 Antagonism of the Interferon-Induced OAS-RNase L Pathway by Murine Coronavirus ns2 Protein Is Required for Virus Replication and Liver Pathology Zhao, Ling; Jha, Babal K.; Wu, Ashley; Elliott, Ruth; Ziebuhr, John; Gorbalenya, Alexander E.; Silverman, Robert H.; Weiss, Susan R. 2012 2012-06-14 None N PMC3377938 22704621.0 10.1016/j.chom.2012.04.011 zgdzd24d 0.318875 Meyerson_2017, Ban_J_2018 Jha_B_2012, Case_2017
173 Lussi_2018 Homodimerisation-independent cleavage of dsRNA by a pestiviral nicking endoribonuclease Lussi, Carmela; Sauter, Kay-Sara; Schweizer, Matthias 2018 2018-05-29 COMM-USE N PMC5974291 29844335.0 10.1038/s41598-018-26557-4 52b5nbwn 0.318752 Meyerson_2017, Ban_J_2018 Case_2017
174 Zhao_2020 Activation of C-Type Lectin Receptor and (RIG)-I-Like Receptors Contributes to Proinflammatory Response in Middle East Respiratory Syndrome Coronavirus-Infected Macrophages Zhao, Xiaoyu; Chu, Hin; Wong, Bosco Ho-Yin; Chiu, Man Chun; Wang, Dong; Li, Cun; Liu, Xiaojuan; Yang, Dong; Poon, Vincent Kwok-Man; Cai, Jianpiao; Chan, Jasper Fuk-Woo; To, Kelvin Kai-Wang; Zhou, Jie; Yuen, Kwok-Yung 2020 2020-02-15 PMC N PMC7107474 31562757.0 10.1093/infdis/jiz483 2wa30218 0.317556 Dixit_2013, Ban_J_2018 Li_S_2016, Lui_P_2016
175 Young_2016 Human IFIT1 Inhibits mRNA Translation of Rubulaviruses but Not Other Members of the Paramyxoviridae Family Young, D. F.; Andrejeva, J.; Li, X.; Inesta-Vaquera, F.; Dong, C.; Cowling, V. H.; Goodbourn, S.; Randall, R. E. 2016 2016-09-29 COMM-USE N PMC5044818 27512068.0 10.1128/jvi.01056-16 fyztb8d9 0.315781 Ban_J_2018, Meyerson_2017 Chen_2019
176 Kenworthy_2009 Short-hairpin RNAs delivered by lentiviral vector transduction trigger RIG-I-mediated IFN activation Kenworthy, Rachael; Lambert, Diana; Yang, Feng; Wang, Nan; Chen, Zihong; Zhu, Haizhen; Zhu, Fanxiu; Liu, Chen; Li, Kui; Tang, Hengli 2009 2009-09-03 NONCOMM N PMC2770676 19729514.0 10.1093/nar/gkp714 uvf5qzfd 0.312206 Ban_J_2018, Dixit_2013
177 Zhu_L_2014 Modulation of Airway Epithelial Antiviral Immunity by Fungal Exposure Zhu, Lingxiang; Lee, Boram; Zhao, Fangkun; Zhou, Xu; Chin, Vanessa; Ling, Serena C.; Chen, Yin 2014 2014-06-01 PMC N PMC4068913 24428709.0 10.1165/rcmb.2013-0357oc uomf1u79 0.311206 Ban_J_2018, Lester_2014 Carrero_2013
178 Hwang_2011 5′-Triphosphate-RNA-independent activation of RIG-I via RNA aptamer with enhanced antiviral activity Hwang, Sun-Young; Sun, Hwa-Young; Lee, Kwang-Hoon; Oh, Byung-Ha; Cha, Yu Jin; Kim, Byeang Hyean; Yoo, Joo-Yeon 2011 2011-11-29 None N PMC3315321 22127865.0 10.1093/nar/gkr1098 mxea3fh4 0.309044 Ban_J_2018, Dixit_2013, Meyerson_2017, Martín-Vicente_2017 Woo_H_2019
179 Kim_S_2015 Amelioration of Japanese encephalitis by blockage of 4-1BB signaling is coupled to divergent enhancement of type I/II IFN responses and Ly-6C(hi) monocyte differentiation Kim, Seong Bum; Choi, Jin Young; Kim, Jin Hyoung; Uyangaa, Erdenebelig; Patil, Ajit Mahadev; Park, Sang-Youel; Lee, John Hwa; Kim, Koanhoi; Han, Young Woo; Eo, Seong Kug 2015 2015-11-24 COMM-USE N PMC4657197 26597582.0 10.1186/s12974-015-0438-x n7eljzjj 0.307633 Swiecki_2010, Dixit_2013, Ban_J_2018
180 Wu_Q_2013 Interleukin-1 receptor-associated kinase M (IRAK-M) promotes human rhinovirus infection in lung epithelial cells via the autophagic pathway Wu, Qun; van Dyk, Linda F.; Jiang, Di; Dakhama, Azzeddine; Li, Liwu; White, Steven R.; Gross, Ashley; Chu, Hong Wei 2013 2013-11-01 PMC N PMC3804030 24074582.0 10.1016/j.virol.2013.08.005 x7a4nsq0 0.307542 Ban_J_2018, Dixit_2013
181 van_Zuylen_2012 Proteomic Profiling of the TRAF3 Interactome Network Reveals a New Role for the ER-to-Golgi Transport Compartments in Innate Immunity van Zuylen, Wendy J.; Doyon, Priscilla; Clément, Jean-François; Khan, Kashif Aziz; D'Ambrosio, Lisa M.; Dô, Florence; St-Amant-Verret, Myriam; Wissanji, Tasheen; Emery, Gregory; Gingras, Anne-Claude; Meloche, Sylvain; Servant, Marc J. 2012 2012-07-05 COMM-USE N PMC3390413 22792062.0 10.1371/journal.ppat.1002747 1m5dbwjv 0.302893 Ban_J_2018, Meyerson_2017
182 Holzer_2011 Inhibition of Interferon Induction and Action by the Nairovirus Nairobi Sheep Disease Virus/Ganjam Virus Holzer, Barbara; Bakshi, Siddharth; Bridgen, Anne; Baron, Michael D. 2011 2011-12-05 COMM-USE N PMC3230622 22163042.0 10.1371/journal.pone.0028594 7jnogabw 0.302679 Meyerson_2017, Ban_J_2018 Sidhu_1996
183 Sorgeloos_2013 Antiviral Type I and Type III Interferon Responses in the Central Nervous System Sorgeloos, Frédéric; Kreit, Marguerite; Hermant, Pascale; Lardinois, Cécile; Michiels, Thomas 2013 2013-03-15 COMM-USE N PMC3705299 23503326.0 10.3390/v5030834 6n5opf7l 0.300812 Bermejo-Jambrina_2018, Dixit_2013, Lester_2014
184 Lasfar_2011 Interferon Lambda: A New Sword in Cancer Immunotherapy Lasfar, Ahmed; Abushahba, Walid; Balan, Murugabaskar; Cohen-Solal, Karine A. 2011 2011-12-06 COMM-USE N PMC3235441 22190970.0 10.1155/2011/349575 d3p9nbgq 0.300210 Pervolaraki_2017, López_2011, Schoggins_2011, Hemann_2017 Egli_2014
185 Chiba_2012 A newly established bovine intestinal epithelial cell line is effective for in vitro screening of potential antiviral immunobiotic microorganisms for cattle Chiba, Eriko; Villena, Julio; Hosoya, Shoichi; Takanashi, Naoya; Shimazu, Tomoyuki; Aso, Hisashi; Tohno, Masanori; Suda, Yoshihito; Kawai, Yasushi; Saito, Tadao; Miyazawa, Kenji; He, Fang; Kitazawa, Haruki 2012 2012-10-31 PMC N PMC7126301 22047818.0 10.1016/j.rvsc.2011.10.002 s61buaze 0.300190 Lester_2014 Villena_2018
186 Cowled_2012 Molecular characterisation of RIG-I-like helicases in the black flying fox, Pteropus alecto Cowled, Christopher; Baker, Michelle L.; Zhou, Peng; Tachedjian, Mary; Wang, Lin-Fa 2012 2012-04-30 PMC N PMC7103216 22166340.0 10.1016/j.dci.2011.11.008 bxi4ax3j 0.300148 Ban_J_2018, Dixit_2013 Zhou_2011