Topic 11 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 34 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Choudhury_2017 RNA-binding activity of TRIM25 is mediated by its PRY/SPRY domain and is required for ubiquitination Nila Roy Choudhury; Gregory Heikel; Maryia Trubitsyna; Peter Kubik; Jakub Stanislaw Nowak; Shaun Webb; Sander Granneman; Christos Spanos; Juri Rappsilber; Alfredo Castello; Gracjan Michlewski 2017 2017-10-09 BioRxiv N 10.1101/200410 ifla4aix 0.701668 Ban_J_2018
2 Ban_J_2018 Human Respiratory Syncytial Virus NS 1 Targets TRIM25 to Suppress RIG-I Ubiquitination and Subsequent RIG-I-Mediated Antiviral Signaling Ban, Junsu; Lee, Na-Rae; Lee, Noh-Jin; Lee, Jong Kil; Quan, Fu-Shi; Inn, Kyung-Soo 2018 2018-12-14 COMM-USE N PMC6316657 30558248.0 10.3390/v10120716 cik2wmlk 0.647777 Meyerson_2017, Dixit_2013, Martín-Vicente_2017 Sedeyn_2019, Chen_2019
3 Patil_2020 TRIM41-Mediated Ubiquitination of Nucleoprotein Limits Vesicular Stomatitis Virus Infection Patil, Girish; Xu, Lingling; Wu, Yakun; Song, Kun; Hao, Wenzhuo; Hua, Fang; Wang, Lingyan; Li, Shitao 2020 2020-01-22 COMM-USE N PMC7077221 31979016.0 10.3390/v12020131 jlib9v5j 0.629901 Meyerson_2017, Ban_J_2018 Case_2017, van_Tol_2017
4 Robitaille_2017 DUSP1 regulates apoptosis and cell migration, but not the JIP1-protected cytokine response, during Respiratory Syncytial Virus and Sendai Virus infection Alexa C. Robitaille; Elise Caron; Nicolas Zucchini; Espérance Mukawera; Damien Adam; Mélissa K. Mariani; Anaïs Gélinas; Audray Fortin; Emmanuelle Brochiero; Nathalie Grandvaux 2017 2017-07-13 BioRxiv N 10.1101/163360 jzzhpw7h 0.587628 Ban_J_2018, Dixit_2013, Martín-Vicente_2017 Robitaille_2017
5 Robitaille_2017 DUSP1 regulates apoptosis and cell migration, but not the JIP1-protected cytokine response, during Respiratory Syncytial Virus and Sendai Virus infection Robitaille, Alexa C.; Caron, Elise; Zucchini, Nicolas; Mukawera, Espérance; Adam, Damien; Mariani, Mélissa K.; Gélinas, Anaïs; Fortin, Audray; Brochiero, Emmanuelle; Grandvaux, Nathalie 2017 2017-12-12 COMM-USE N PMC5727028 29234123.0 10.1038/s41598-017-17689-0 jidvkij5 0.566898 Ban_J_2018, Dixit_2013, Martín-Vicente_2017, Li_C_2017 Robitaille_2017
6 Okamoto_2018 Regulation of RIG-I Activation by K63-Linked Polyubiquitination Okamoto, Masaaki; Kouwaki, Takahisa; Fukushima, Yoshimi; Oshiumi, Hiroyuki 2018 2018-01-05 COMM-USE N PMC5760545 29354136.0 10.3389/fimmu.2017.01942 r56lih8j 0.554015 Ban_J_2018, Meyerson_2017, Martín-Vicente_2017 Ezelle_2016, Seo_G_2018
7 Jin_Y_2019 Zebrafish TRIM25 Promotes Innate Immune Response to RGNNV Infection by Targeting 2CARD and RD Regions of RIG-I for K63-Linked Ubiquitination Jin, Yilin; Jia, Kuntong; Zhang, Wanwan; Xiang, Yangxi; Jia, Peng; Liu, Wei; Yi, Meisheng 2019 2019-12-03 COMM-USE N PMC6901795 31849979.0 10.3389/fimmu.2019.02805 bjs5oliw 0.518787 Ban_J_2018, Dixit_2013, Martín-Vicente_2017, Liu_Y_2017 Chen_2018, Ban_J_2018
8 Lai_C_2019 Long noncoding RNA AVAN promotes antiviral innate immunity by interacting with TRIM25 and enhancing the transcription of FOXO3a Chengcai Lai; Lihui Liu; Qinghua Liu; Sijie Cheng; Keyu Wang; Lingna Zhao; Min Xia; Cheng Wang; Hongjing Gu; Yueqiang Duan; Zhongpeng Zhao; Lili Zhang; Ziyang Liu; Jianjun Luo; Jianxun Song; Penghui Yang; Runsheng Chen; Xiliang Wang 2019 2019-04-30 BioRxiv N 10.1101/623132 0p8z25c1 0.509106 Ban_J_2018, Dixit_2013, Martín-Vicente_2017, Lester_2014 Ezelle_2016
9 Hastie_2011 Structure of the Lassa virus nucleoprotein reveals a dsRNA-specific 3′ to 5′ exonuclease activity essential for immune suppression Hastie, Kathryn M.; Kimberlin, Christopher R.; Zandonatti, Michelle A.; MacRae, Ian J.; Saphire, Erica Ollmann 2011 2011-01-24 PMC N PMC3038715 21262835.0 10.1073/pnas.1016404108 9irxt0kh 0.492254 Meyerson_2017, Ban_J_2018 Case_2017
10 Chen_2015 Ring finger protein 166 potentiates RNA virus-induced interferon-β production via enhancing the ubiquitination of TRAF3 and TRAF6 Chen, Hai-Wei; Yang, Yong-Kang; Xu, Hao; Yang, Wei-Wei; Zhai, Zhong-He; Chen, Dan-Ying 2015 2015-10-12 COMM-USE N PMC4600972 26456228.0 10.1038/srep14770 8jizi6hu 0.489463 Ban_J_2018, Meyerson_2017, Martín-Vicente_2017 Zhang_2016
11 Huang_2014 MAVS-MKK7-JNK2 Defines a Novel Apoptotic Signaling Pathway during Viral Infection Huang, Yuefeng; Liu, Heng; Li, Senlin; Tang, Yijun; Wei, Bo; Yu, Huansha; Wang, Chen 2014 2014-03-20 COMM-USE N PMC3961361 24651600.0 10.1371/journal.ppat.1004020 6yto9emz 0.475211 Ban_J_2018 Lei_Y_2009, Robitaille_2017
12 Ma_H_2017 The Long Noncoding RNA NEAT1 Exerts Antihantaviral Effects by Acting as Positive Feedback for RIG-I Signaling Ma, Hongwei; Han, Peijun; Ye, Wei; Chen, Hesong; Zheng, Xuyang; Cheng, Linfeng; Zhang, Liang; Yu, Lan; Wu, Xing'an; Xu, Zhikai; Lei, Yingfeng; Zhang, Fanglin 2017 2017-04-13 COMM-USE N PMC5391460 28202761.0 10.1128/jvi.02250-16 g9nr6pb2 0.463125 Ban_J_2018, Dixit_2013 Lai_C_2019
13 Li_L_2020 TRIM62 From Chicken as a Negative Regulator of Reticuloendotheliosis Virus Replication Li, Ling; Niu, Dongyan; Yang, Jie; Bi, Jianmin; Zhang, Lingjuan; Cheng, Ziqiang; Wang, Guihua 2020 2020-04-03 COMM-USE N PMC7146716 10.3389/fvets.2020.00152 uxir9jzw 0.459511 Ban_J_2018
14 Meyerson_2017 Nuclear TRIM25 specifically targets influenza virus ribonucleoproteins to block the onset of RNA chain elongation Meyerson, Nicholas R.; Zhou, Ligang; Guo, Yusong R.; Zhao, Chen; Tao, Yizhi J.; Krug, Robert M.; Sawyer, Sara L. 2017 2017-11-01 PMC N PMC6309188 29107643.0 10.1016/j.chom.2017.10.003 s1vyhijy 0.447914 Ban_J_2018
15 van_der_Sluijs_2003 Toll-like receptor 4 is not involved in host defense against respiratory tract infection with Sendai virus van der Sluijs, Koenraad F.; van Elden, Leontine; Nijhuis, Monique; Schuurman, Rob; Florquin, Sandrine; Jansen, Henk M.; Lutter, René; van der Poll, Tom 2003 2003-10-31 PMC N PMC7119665 14556979.0 10.1016/s0165-2478(03)00138-x d4vn28kk 0.445861 Sedeyn_2019, Mazaleuskaya_2012
16 Chen_2016 Functional motifs responsible for human metapneumovirus M2-2-mediated innate immune evasion Chen, Yu; Deng, Xiaoling; Deng, Junfang; Zhou, Jiehua; Ren, Yuping; Liu, Shengxuan; Prusak, Deborah J.; Wood, Thomas G.; Bao, Xiaoyong 2016 2016-12-31 PMC N PMC5102771 27743962.0 10.1016/j.virol.2016.09.026 hhgnaec3 0.443940 Ban_J_2018, Dixit_2013, Martín-Vicente_2017, Lester_2014, Liu_Y_2017 Case_2017
17 Gabor_2013 Super Resolution Microscopy Reveals that Caveolin-1 Is Required for Spatial Organization of CRFB1 and Subsequent Antiviral Signaling in Zebrafish Gabor, Kristin A.; Stevens, Chad R.; Pietraszewski, Matthew J.; Gould, Travis J.; Shim, Juyoung; Yoder, Jeffrey A.; Lam, Siew Hong; Gong, Zhiyuan; Hess, Samuel T.; Kim, Carol H. 2013 2013-07-09 COMM-USE N PMC3706321 23874753.0 10.1371/journal.pone.0068759 cdnkk6ou 0.434417 Lester_2014, Geijtenbeek_2009, Martín-Vicente_2017, Dixit_2013
18 Mao_H_2016 HACE1 Negatively Regulates Virus-Triggered Type I IFN Signaling by Impeding the Formation of the MAVS-TRAF3 Complex Mao, He-Ting; Wang, Yan; Cai, Juan; Meng, Jun-Ling; Zhou, Yu; Pan, Yu; Qian, Xiao-Ping; Zhang, Yu; Zhang, Jun 2016 2016-05-21 COMM-USE N PMC4885101 27213432.0 10.3390/v8050146 ntq1f4ix 0.422046 Ban_J_2018, Martín-Vicente_2017
19 Qian_2017 The C-Terminal Effector Domain of Non-Structural Protein 1 of Influenza A Virus Blocks IFN-β Production by Targeting TNF Receptor-Associated Factor 3 Qian, Wei; Wei, Xiaoqin; Guo, Kelei; Li, Yongtao; Lin, Xian; Zou, Zhong; Zhou, Hongbo; Jin, Meilin 2017 2017-07-03 COMM-USE N PMC5494602 28717359.0 10.3389/fimmu.2017.00779 00mqmpzw 0.414379 Ban_J_2018, Dixit_2013, Martín-Vicente_2017, Meyerson_2017 Unterholzner_2011
20 Fan_W_2016 TRIM52 inhibits Japanese Encephalitis Virus replication by degrading the viral NS2A Fan, Wenchun; Wu, Mengge; Qian, Suhong; Zhou, Yun; Chen, Huanchun; Li, Xiangmin; Qian, Ping 2016 2016-09-26 COMM-USE N PMC5035999 27667714.0 10.1038/srep33698 p11zya6t 0.410275 Ban_J_2018, Meyerson_2017, Li_C_2017 van_Tol_2017
21 Yang_2019 The E3 ligase TRIM56 is a host restriction factor of Zika virus and depends on its RNA-binding activity but not miRNA regulation, for antiviral function Yang, Darong; Li, Nan L.; Wei, Dahai; Liu, Baoming; Guo, Fang; Elbahesh, Husni; Zhang, Yunzhi; Zhou, Zhi; Chen, Guo-Yun; Li, Kui 2019 2019-06-28 COMM-USE N PMC6623546 31251739.0 10.1371/journal.pntd.0007537 1nr0hggt 0.377573 Meyerson_2017, Ban_J_2018
22 Zhang_2014 Hantaan Virus Infection Induces CXCL10 Expression through TLR3, RIG-I, and MDA-5 Pathways Correlated with the Disease Severity Zhang, Yusi; Liu, Bei; Ma, Ying; Yi, Jing; Zhang, Chunmei; Zhang, Yun; Xu, Zhuwei; Wang, Jiuping; Yang, Kun; Yang, Angang; Zhuang, Ran; Jin, Boquan 2014 2014-02-23 COMM-USE N PMC3950924 24701034.0 10.1155/2014/697837 sbhjfyfv 0.371710 Ban_J_2018, Dixit_2013 Chen_2019
23 Hwang_2011 5′-Triphosphate-RNA-independent activation of RIG-I via RNA aptamer with enhanced antiviral activity Hwang, Sun-Young; Sun, Hwa-Young; Lee, Kwang-Hoon; Oh, Byung-Ha; Cha, Yu Jin; Kim, Byeang Hyean; Yoo, Joo-Yeon 2011 2011-11-29 None N PMC3315321 22127865.0 10.1093/nar/gkr1098 mxea3fh4 0.354311 Ban_J_2018, Dixit_2013, Meyerson_2017, Martín-Vicente_2017 Woo_H_2019
24 Woo_H_2019 Recovery of TRIM25-Mediated RIG-I Ubiquitination through Suppression of NS1 by RNA Aptamers Woo, Hye-Min; Lee, Jin-Moo; Kim, Chul-Joong; Lee, Jong-Soo; Jeong, Yong-Joo 2019 2019-10-10 None N PMC6821451 31600868.0 10.14348/molcells.2019.0157 8ukqvjmq 0.349894 Ban_J_2018, Meyerson_2017
25 Chesarino_2014 Regulation of the trafficking and antiviral activity of IFITM3 by post-translational modifications Chesarino, Nicholas M; McMichael, Temet M; Yount, Jacob S 2014 2014-10-01 PMC N PMC4254935 25405885.0 10.2217/fmb.14.65 9g70swcr 0.323678 Ban_J_2018, Martín-Vicente_2017, Meyerson_2017 Martín-Vicente_2017
26 Ouyang_2014 NRAV, a Long Noncoding RNA, Modulates Antiviral Responses through Suppression of Interferon-Stimulated Gene Transcription Ouyang, Jing; Zhu, Xiaomei; Chen, Yuhai; Wei, Haitao; Chen, Qinghuang; Chi, Xiaojuan; Qi, Baomin; Zhang, Lianfeng; Zhao, Yi; Gao, George Fu; Wang, Guoshun; Chen, Ji-Long 2014 2014-11-12 None N PMC7104942 25525793.0 10.1016/j.chom.2014.10.001 34coud2g 0.318553 Ban_J_2018, Dixit_2013 Lai_C_2019
27 Martín-Vicente_2017 TRIM25 in the Regulation of the Antiviral Innate Immunity Martín-Vicente, María; Medrano, Luz M.; Resino, Salvador; García-Sastre, Adolfo; Martínez, Isidoro 2017 2017-09-22 COMM-USE N PMC5614919 29018447.0 10.3389/fimmu.2017.01187 rq78nbpt 0.318094 Ban_J_2018, Dixit_2013, Meyerson_2017, Viswanathan_2010 van_Tol_2017, Ezelle_2016