Topic 04 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 26 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Reich_2017 Quantifying the Risk and Cost of Active Monitoring for Infectious Diseases Nicholas G Reich; Justin Lessler; Jay K Varma; Neil M Vora 2017 2017-06-28 BioRxiv N 10.1101/156497 h89scli5 0.950782 Reich_2018
2 Reich_2018 Quantifying the Risk and Cost of Active Monitoring for Infectious Diseases Reich, Nicholas G.; Lessler, Justin; Varma, Jay K.; Vora, Neil M. 2018 2018-01-18 None N PMC5773605 29348656.0 10.1038/s41598-018-19406-x u72u2keb 0.942147 Reich_2017
3 Mohr_2013 Development of a risk assessment tool for contact tracing people after contact with infectious patients while travelling by bus or other public ground transport: a Delphi consensus approach Mohr, Oliver; Hermes, Julia; Schink, Susanne B; Askar, Mona; Menucci, Daniel; Swaan, Corien; Goetsch, Udo; Monk, Philip; Eckmanns, Tim; Poggensee, Gabriele; Krause, Gérard 2013 2013-10-24 None N PMC3808761 24157815.0 10.1136/bmjopen-2013-002939 99bhj7ft 0.793215 Hellmich_2017, Chen_2007, Enanoria_2016, Racelis_2015
4 Porco_2004 Logistics of community smallpox control through contact tracing and ring vaccination: a stochastic network model Porco, Travis C; Holbrook, Karen A; Fernyak, Susan E; Portnoy, Diane L; Reiter, Randy; Aragón, Tomás J 2004 2004-08-06 COMM-USE N PMC520756 15298713.0 10.1186/1471-2458-4-34 sgmk96vr 0.735414 Kretzschmar_2004, Kretzschmar_2020, Hellewell_2020
5 Armbruster_2007 Contact tracing to control infectious disease: when enough is enough Armbruster, Benjamin; Brandeau, Margaret L. 2007 2007-10-03 PMC N PMC3428220 18074967.0 10.1007/s10729-007-9027-6 r3tmfweq 0.713206 Porco_2004, Kretzschmar_2020, Klinkenberg_2006
6 Pourbohloul_2005 Modeling Control Strategies of Respiratory Pathogens Pourbohloul, Babak; Meyers, Lauren Ancel; Skowronski, Danuta M.; Krajden, Mel; Patrick, David M.; Brunham, Robert C. 2005 2005-08-23 PMC N PMC3320482 16102315.0 10.3201/eid1108.040449 qun1kyvw 0.700949
7 Peak_2016 Containing Emerging Epidemics: a Quantitative Comparison of Quarantine and Symptom Monitoring Corey M Peak; Lauren M Childs; Yonatan H Grad; Caroline O Buckee 2016 2016-08-31 BioRxiv N 10.1101/072652 2j4z5rp8 0.691340
8 Adams_2019 Quantifying the roles of vomiting, diarrhea, and residents vs. staff in norovirus transmission in U.S. nursing home outbreaks Carly Adams; David Young; Paul A Gastañaduy; Prabasaj Paul; Zach Marsh; Aron J Hall; Benjamin A Lopman 2019 2019-07-18 BioRxiv N 10.1101/707356 ghihvjj3 0.667613 Adams_2020
9 Adams_2020 Quantifying the roles of vomiting, diarrhea, and residents vs. staff in norovirus transmission in U.S. nursing home outbreaks Adams, Carly; Young, David; Gastañaduy, Paul A.; Paul, Prabasaj; Marsh, Zach; Hall, Aron J.; Lopman, Benjamin A. 2020 2020-03-25 None N PMC7135310 32210423.0 10.1371/journal.pcbi.1007271 q6jh7oaf 0.634948 Adams_2019
10 Klinkenberg_2006 The Effectiveness of Contact Tracing in Emerging Epidemics Klinkenberg, Don; Fraser, Christophe; Heesterbeek, Hans 2006 2006-12-20 COMM-USE N PMC1762362 17183638.0 10.1371/journal.pone.0000012 1n0rg5vd 0.591573 Kretzschmar_2020, Armbruster_2007, Hellewell_2020
11 Vonnahme_2017 US Federal Travel Restrictions for Persons with Higher-Risk Exposures to Communicable Diseases of Public Health Concern Vonnahme, Laura A.; Jungerman, M. Robynne; Gulati, Reena K.; Illig, Petra; Alvarado-Ramy, Francisco 2017 2017-12-23 PMC N PMC5711296 29155659.0 10.3201/eid2313.170386 31w14qqf 0.560971
12 Peak_2020 Modeling the Comparative Impact of Individual Quarantine vs. Active Monitoring of Contacts for the Mitigation of COVID-19 Corey M Peak; Rebecca Kahn; Yonatan H Grad; Lauren M Childs; Ruoran Li; Marc Lipsitch; Caroline O Buckee 2020 2020-03-08 BioRxiv Y 10.1101/2020.03.05.20031088 e2p46wa8 0.537523 Kretzschmar_2020, Yuan_2020
13 Torneri_2020 A prospect on the use of antiviral drugs to control local outbreaks of COVID-19 Andrea Torneri; Pieter Jules Karel Libin; Joris Vanderlocht; Anne-Mieke Vandamme; Johan Neyts; Niel Hens 2020 2020-03-20 BioRxiv Y 10.1101/2020.03.19.20038182 9sr5b44k 0.511385
14 MacIntyre_2019 Health system capacity in Sydney, Australia in the event of a biological attack with smallpox MacIntyre, Chandini Raina; Costantino, Valentina; Kunasekaran, Mohana Priya 2019 2019-06-14 COMM-USE N PMC6568391 31199825.0 10.1371/journal.pone.0217704 m4xba78g 0.498881 Porco_2004, Lloyd-Smith_2003, Ohkusa_2005
15 Ohkusa_2005 Prediction of smallpox outbreak and evaluation of control-measure policy in Japan, using a mathematical model Ohkusa, Yasushi; Taniguchi, Kiyosu; Okubo, Ichiro 2005 2005-12-31 None N PMC7087876 15856374.0 10.1007/s10156-005-0373-3 1kpooq3j 0.480314 Yuan_2020, Kretzschmar_2004
16 Si_Y_2009 Hidden Cluster Detection for Infectious Disease Control and Quarantine Management Si, Yain-Whar; Leong, Kan-Ion; Biuk-Aghai, Robert P.; Fong, Simon 2009 2009-09-30 PMC N PMC7122094 10.1007/978-1-4419-0312-9_10 qbksb83c 0.465142 Kretzschmar_2020
17 Drake_2006 Societal Learning in Epidemics: Intervention Effectiveness during the 2003 SARS Outbreak in Singapore Drake, John M.; Chew, Suok Kai; Ma, Stefan 2006 2006-12-20 COMM-USE N PMC1762333 17183647.0 10.1371/journal.pone.0000020 odzrco6q 0.460801 Grubaugh_2018, Grubaugh_2019
18 Edmunds_2006 Mixing patterns and the spread of close-contact infectious diseases Edmunds, WJ; Kafatos, G; Wallinga, J; Mossong, JR 2006 2006-08-14 COMM-USE N PMC1562421 16907980.0 10.1186/1742-7622-3-10 c5gl9p3a 0.447611 Kretzschmar_2020, Nishiura_2007
19 Keeling_2020 The Efficacy of Contact Tracing for the Containment of the 2019 Novel Coronavirus (COVID-19). Matt J Keeling; T. Deirdre Hollingsworth; Jonathan M Read 2020 2020-02-17 BioRxiv Y 10.1101/2020.02.14.20023036 rgzmpoxv 0.446819 Kretzschmar_2020, Xia_W_2020
20 Kretzschmar_2004 Ring Vaccination and Smallpox Control Kretzschmar, Mirjam; van den Hof, Susan; Wallinga, Jacco; van Wijngaarden, Jan 2004 2004-05-23 PMC N PMC3323203 15200816.0 10.3201/eid1005.030419 qwq46b8a 0.444840 Porco_2004, Ohkusa_2005
21 Wilder-Smith_2020 Isolation, quarantine, social distancing and community containment: pivotal role for old-style public health measures in the novel coronavirus (2019-nCoV) outbreak Wilder-Smith, A; Freedman, D O 2020 2020-02-13 PMC Y PMC7107565 32052841.0 10.1093/jtm/taaa020 ophojm43 0.430954
22 Mummert_2013 Get the News Out Loudly and Quickly: The Influence of the Media on Limiting Emerging Infectious Disease Outbreaks Mummert, Anna; Weiss, Howard 2013 2013-08-26 COMM-USE N PMC3753329 23990974.0 10.1371/journal.pone.0071692 6zployed 0.428330 Herrera-Diestra_2019, Grubaugh_2019
23 Day_T_2006 When Is Quarantine a Useful Control Strategy for Emerging Infectious Diseases? Day, Troy; Park, Andrew; Madras, Neal; Gumel, Abba; Wu, Jianhong 2006 2006-03-01 PMC N PMC7109638 16421244.0 10.1093/aje/kwj056 e350kj7m 0.420935 Lauro_2020
24 Gupta_2005 The economic impact of quarantine: SARS in Toronto as a case study Gupta, Anu G.; Moyer, Cheryl A.; Stern, David T. 2005 2005-06-30 PMC N PMC7112515 15907545.0 10.1016/j.jinf.2004.08.006 kp7qk49p 0.414247 Hsieh_2007
25 Braithwaite_2020 Automated and semi-automated contact tracing: Protocol for a rapid review of available evidence and current challenges to inform the control of COVID-19 Isobel Braithwaite; Tom Callender; Miriam Bullock; Rob Aldridge 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.14.20063636 xph08fwv 0.411858
26 McMichael_2020 Epidemiology of Covid-19 in a Long-Term Care Facility in King County, Washington McMichael, Temet M.; Currie, Dustin W.; Clark, Shauna; Pogosjans, Sargis; Kay, Meagan; Schwartz, Noah G.; Lewis, James; Baer, Atar; Kawakami, Vance; Lukoff, Margaret D.; Ferro, Jessica; Brostrom-Smith, Claire; Rea, Thomas D.; Sayre, Michael R.; Riedo, Francis X.; Russell, Denny; Hiatt, Brian; Montgomery, Patricia; Rao, Agam K.; Chow, Eric J.; Tobolowsky, Farrell; Hughes, Michael J.; Bardossy, Ana C.; Oakley, Lisa P.; Jacobs, Jesica R.; Stone, Nimalie D.; Reddy, Sujan C.; Jernigan, John A.; Honein, Margaret A.; Clark, Thomas A.; Duchin, Jeffrey S. 2020 2020-03-27 None Y PMC7121761 32220208.0 10.1056/nejmoa2005412 ajqbljai 0.409233
27 Hellewell_2020 Feasibility of controlling 2019-nCoV outbreaks by isolation of cases and contacts Joel Hellewell; Sam Abbott; Amy Gimma; Nikos I Bosse; Christopher I Jarvis; Timothy W Russell; James D Munday; Adam J Kucharski; W John Edmunds; CMMID nCoV working group; Sebastian Funk; Rosalind M Eggo 2020 2020-02-11 BioRxiv Y 10.1101/2020.02.08.20021162 a8ig607t 0.406260 Hellewell_2020, Kretzschmar_2020, Tang_2020, Xia_W_2020
28 Hellewell_2020 Feasibility of controlling COVID-19 outbreaks by isolation of cases and contacts Hellewell, Joel; Abbott, Sam; Gimma, Amy; Bosse, Nikos I; Jarvis, Christopher I; Russell, Timothy W; Munday, James D; Kucharski, Adam J; Edmunds, W John; Funk, Sebastian; Eggo, Rosalind M 2020 2020-02-28 None Y PMC7097845 32119825.0 10.1016/s2214-109x(20)30074-7 ueb7mjnv 0.398020 Kretzschmar_2020, Hellewell_2020, Xia_W_2020
29 Bae_J_2015 Surveillance operation for the 141st confirmed case of Middle East Respiratory Syndrome coronavirus in response to the patient’s prior travel to Jeju Island Bae, Jong-Myon 2015 2015-08-07 NONCOMM N PMC4546987 26300437.0 10.4178/epih/e2015035 qxlypgcj 0.394946
30 Ferretti_2020 Quantifying SARS-CoV-2 transmission suggests epidemic control with digital contact tracing Ferretti, Luca; Wymant, Chris; Kendall, Michelle; Zhao, Lele; Nurtay, Anel; Abeler-Dörner, Lucie; Parker, Michael; Bonsall, David; Fraser, Christophe 2020 2020-03-31 None Y PMC7164555 32234805.0 10.1126/science.abb6936 zueghgx5 0.393306
31 DiGiovanni_2005 Quarantine Stressing Voluntary Compliance DiGiovanni, Cleto; Bowen, Nancy; Ginsberg, Michele; Giles, Gregory 2005 2005-11-23 PMC N PMC3367339 16318738.0 10.3201/eid1111.050661 bu617h9z 0.381248
32 Handel_2006 What is the best control strategy for multiple infectious disease outbreaks? Handel, Andreas; Longini, Ira M; Antia, Rustom 2006 2006-12-19 PMC N PMC2093965 17251095.0 10.1098/rspb.2006.0015 jh3lb6po 0.366352
33 Hertzberg_2016 On the 2-Row Rule for Infectious Disease Transmission on Aircraft Hertzberg, Vicki Stover; Weiss, Howard 2016 2016-10-31 PMC N PMC7104167 28283135.0 10.1016/j.aogh.2016.06.003 0rrhiw9m 0.366060
34 Enanoria_2016 The Effect of Contact Investigations and Public Health Interventions in the Control and Prevention of Measles Transmission: A Simulation Study Enanoria, Wayne T. A.; Liu, Fengchen; Zipprich, Jennifer; Harriman, Kathleen; Ackley, Sarah; Blumberg, Seth; Worden, Lee; Porco, Travis C. 2016 2016-12-12 COMM-USE N PMC5152814 27941976.0 10.1371/journal.pone.0167160 cvmnmg04 0.360943 Porco_2004, Robert_2020
35 Feng_2009 Timely identification of optimal control strategies for emerging infectious diseases Feng, Zhilan; Yang, Yiding; Xu, Dashun; Zhang, Pei; McCauley, Mary Mason; Glasser, John W. 2009 2009-07-07 PMC N PMC7126620 19289133.0 10.1016/j.jtbi.2009.03.006 c2kmog0g 0.348764 Nishiura_2007
36 Herrera-Diestra_2019 Local risk perception enhances epidemic control Herrera-Diestra, José L.; Meyers, Lauren Ancel 2019 2019-12-03 COMM-USE N PMC6890219 31794551.0 10.1371/journal.pone.0225576 9c0zrp7p 0.342195 Porco_2004, Enanoria_2016
37 Yuen_2015 Turning off the tap: stopping tuberculosis transmission through active case-finding and prompt effective treatment Yuen, Courtney M; Amanullah, Farhana; Dharmadhikari, Ashwin; Nardell, Edward A; Seddon, James A; Vasilyeva, Irina; Zhao, Yanlin; Keshavjee, Salmaan; Becerra, Mercedes C 2015 2015-12-11 PMC N PMC7138065 26515675.0 10.1016/s0140-6736(15)00322-0 tggxfk8a 0.332172
38 Haber_2007 Effectiveness of Interventions to Reduce Contact Rates during a Simulated Influenza Pandemic Haber, Michael J.; Shay, Davis K.; Davis, Xiaohong M.; Patel, Rajan; Jin, Xiaoping; Weintraub, Eric; Orenstein, Evan; Thompson, William W. 2007 2007-04-23 PMC N PMC2725959 17553273.0 10.3201/eid1304.060828 ehp0q0ry 0.328892 Enanoria_2016, Porco_2004
39 Kang_2016 Contact Tracing for Imported Case of Middle East Respiratory Syndrome, China, 2015 Kang, Min; Song, Tie; Zhong, Haojie; Hou, Jie; Wang, Jun; Li, Jiansen; Wu, Jie; He, Jianfeng; Lin, Jinyan; Zhang, Yonghhui 2016 2016-09-23 PMC N PMC4994337 27532887.0 10.3201/eid2209.152116 68z2pxfz 0.321256
40 Ge_Y_2020 Assessing the impact of a symptom-based mass screening and testing intervention during a novel infectious disease outbreak: The case of COVID-19 Yang Ge; Brian Kenneth McKay; Shengzhi Sun; Feng Zhang; Andreas Handel 2020 2020-02-23 BioRxiv Y 10.1101/2020.02.20.20025973 4gaa14ly 0.320120 Lauro_2020, Handel_2006 Gostic_2020
41 Swaan_2019 Timeliness of infectious disease reporting, the Netherlands, 2003 to 2017: law change reduced reporting delay, disease identification delay is next Swaan, Corien M; Wong, Albert; Bonačić Marinović, Axel; Kretzschmar, Mirjam EE; van Steenbergen, Jim E 2019 2019-12-05 COMM-USE N PMC6905299 31822327.0 10.2807/1560-7917.es.2019.24.49.1900237 n3lh1v3k 0.302512 Park_2016