Topic 04 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 25 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Biao_2016 Accurate prediction of human essential genes using only nucleotide composition and association information Feng-Biao Biao; Chuan Dong; Hong-Li Hua; Shuo Liu; Hao Luo; Hong-Wan Zhang; Yan-Ting Jin; Kai-Yue Zhang 2016 2016-10-28 BioRxiv N 10.1101/084129 w49x7kca 0.936510 Chang_2011, Lee_C_2017, Qi_Z_2018, Saw_A_2019, Dai_Q_2012 Guo_F_2017, Xiao_2017
2 Guo_F_2017 Accurate prediction of human essential genes using only nucleotide composition and association information Guo, Feng-Biao; Dong, Chuan; Hua, Hong-Li; Liu, Shuo; Luo, Hao; Zhang, Hong-Wan; Jin, Yan-Ting; Zhang, Kai-Yue 2017 2017-06-15 PMC N PMC7110051 28158612.0 10.1093/bioinformatics/btx055 vj9tv3or 0.921651 Chang_2011, Lee_C_2017, Qi_Z_2018, Saw_A_2019, Dai_Q_2012 Biao_2016, Xiao_2017, Nakai_1992, Suresh_2015
3 Wu_G_2007 Prediction of mutations engineered by randomness in H5N1 hemagglutinins of influenza A virus Wu, G.; Yan, S. 2007 2007-11-02 PMC N PMC7088403 17973072.0 10.1007/s00726-007-0602-4 rx0os4ke 0.912639 Qi_Z_2018, Chang_2011, Cheng_2012 Wu_G_2007
4 Cai_C_2006 Prediction of Transmembrane Proteins from Their Primary Sequence by Support Vector Machine Approach Cai, C. Z.; Yuan, Q. F.; Xiao, H. G.; Liu, X. H.; Han, L. Y.; Chen, Y. Z. 2006 2006-01-01 PMC N PMC7121931 10.1007/11816102_56 rktwtqtq 0.858167 Saw_A_2019, Lee_C_2017, Qi_Z_2018, Chang_2011 Lee_B_2009, Han_L_2005
5 Zhao_2012 Using Support Vector Machine and Evolutionary Profiles to Predict Antifreeze Protein Sequences Zhao, Xiaowei; Ma, Zhiqiang; Yin, Minghao 2012 2012-02-17 COMM-USE N PMC3292016 22408447.0 10.3390/ijms13022196 7vfo98ho 0.836657 Saw_A_2019, Qi_Z_2018, Lee_C_2017, Dai_Q_2012, Chang_2011 Cai_C_2006, Xu_Y_2015
6 Muthukrishnan_2014 Support vector machine (SVM) based multiclass prediction with basic statistical analysis of plasminogen activators Muthukrishnan, Selvaraj; Puri, Munish; Lefevre, Christophe 2014 2014-01-27 COMM-USE N PMC3924408 24468032.0 10.1186/1756-0500-7-63 8c75hp7r 0.835704 Qi_Z_2018, Saw_A_2019, Chang_2011, Dai_Q_2012, Lee_C_2017 Cai_C_2006
7 Xiao_2013 iGPCR-Drug: A Web Server for Predicting Interaction between GPCRs and Drugs in Cellular Networking Xiao, Xuan; Min, Jian-Liang; Wang, Pu; Chou, Kuo-Chen 2013 2013-08-27 COMM-USE N PMC3754978 24015221.0 10.1371/journal.pone.0072234 kt6wqvam 0.814814 Lee_C_2017, Qi_Z_2018, Chang_2011, Liou_2013 Fan_Y_2014, Min_J_2013
8 Yan_S_2009 Mutation patterns in human α-galactosidase A Yan, Shaomin; Wu, Guang 2009 2009-05-26 PMC N PMC7088632 19468850.0 10.1007/s11030-009-9158-4 7floluv1 0.792340 Chang_2011, Qi_Z_2018
9 Wu_G_2007 Prediction of mutations engineered by randomness in H5N1 neuraminidases from influenza A virus Wu, G.; Yan, S. 2007 2007-08-28 PMC N PMC7088166 17721674.0 10.1007/s00726-007-0579-z wocuomb1 0.786540 Chang_2011, Qi_Z_2018, Cheng_2012 Wu_G_2007
10 Shen_2018 RPiRLS: Quantitative Predictions of RNA Interacting with Any Protein of Known Sequence Shen, Wen-Jun; Cui, Wenjuan; Chen, Danze; Zhang, Jieming; Xu, Jianzhen 2018 2018-02-28 COMM-USE N PMC6017498 29495575.0 10.3390/molecules23030540 6oca1mrm 0.770435 Saw_A_2019, Qi_Z_2018, Chang_2011, Dai_Q_2012, Lee_C_2017 Muppirala_2011, Suresh_2015
11 He_Z_2010 Predicting Drug-Target Interaction Networks Based on Functional Groups and Biological Features He, Zhisong; Zhang, Jian; Shi, Xiao-He; Hu, Le-Le; Kong, Xiangyin; Cai, Yu-Dong; Chou, Kuo-Chen 2010 2010-03-11 COMM-USE N PMC2836373 20300175.0 10.1371/journal.pone.0009603 ni6iyzdn 0.761389 Saw_A_2019, Qi_Z_2018, Chang_2011, Lee_C_2017, Dai_Q_2012 Wang_2018, Zhou_2010
12 Xu_Y_2013 iSNO-AAPair: incorporating amino acid pairwise coupling into PseAAC for predicting cysteine S-nitrosylation sites in proteins Xu, Yan; Shao, Xiao-Jian; Wu, Ling-Yun; Deng, Nai-Yang; Chou, Kuo-Chen 2013 2013-10-03 COMM-USE N PMC3792191 24109555.0 10.7717/peerj.171 3fwd4guk 0.759284 Chang_2011, Plewczyński_2008, Kirillova_2009
13 Lee_B_2009 Identification of protein functions using a machine-learning approach based on sequence-derived properties Lee, Bum Ju; Shin, Moon Sun; Oh, Young Joon; Oh, Hae Seok; Ryu, Keun Ho 2009 2009-08-09 COMM-USE N PMC2731080 19664241.0 10.1186/1477-5956-7-27 85fqseal 0.754843 Chang_2011, Qi_Z_2018, Saw_A_2019, Dai_Q_2012, Lee_C_2017 Cai_C_2006, Han_L_2005
14 Muppirala_2011 Predicting RNA-Protein Interactions Using Only Sequence Information Muppirala, Usha K; Honavar, Vasant G; Dobbs, Drena 2011 2011-12-22 COMM-USE N PMC3322362 22192482.0 10.1186/1471-2105-12-489 8k7d1riv 0.745388 Qi_Z_2018, Chang_2011, Saw_A_2019, Lee_C_2017, Dai_Q_2012 Suresh_2015, Shen_2018
15 Yan_C_2019 IILLS: predicting virus-receptor interactions based on similarity and semi-supervised learning Yan, Cheng; Duan, Guihua; Wu, Fang-Xiang; Wang, Jianxin 2019 2019-12-27 COMM-USE N PMC6933616 31881820.0 10.1186/s12859-019-3278-3 ch4kere3 0.732932 Saw_A_2019, Qi_Z_2018, Chang_2011, Lee_C_2017, Feng_2010 Mock_2019, Cho_M_2019
16 Han_L_2005 Prediction of functional class of novel viral proteins by a statistical learning method irrespective of sequence similarity Han, L.Y.; Cai, C.Z.; Ji, Z.L.; Chen, Y.Z. 2005 2005-01-05 PMC N PMC7111859 15582660.0 10.1016/j.virol.2004.10.020 88l9bq4i 0.723577 Lee_C_2017, Chang_2011, Qi_Z_2018, Saw_A_2019 Lee_B_2009
17 Fan_Y_2014 iNR-Drug: Predicting the Interaction of Drugs with Nuclear Receptors in Cellular Networking Fan, Yue-Nong; Xiao, Xuan; Min, Jian-Liang; Chou, Kuo-Chen 2014 2014-03-19 COMM-USE N PMC3975431 24651462.0 10.3390/ijms15034915 qdld7hdc 0.698522 Lee_C_2017, Kirillova_2009, Qi_Z_2018, Chang_2011 Xiao_2013
18 Min_J_2013 iEzy-Drug: A Web Server for Identifying the Interaction between Enzymes and Drugs in Cellular Networking Min, Jian-Liang; Xiao, Xuan; Chou, Kuo-Chen 2013 2013-11-26 COMM-USE N PMC3858977 24371828.0 10.1155/2013/701317 jpj1czhg 0.693429 Qi_Z_2018, Lee_C_2017, Chang_2011, Liou_2013, Saw_A_2019
19 Suresh_2015 RPI-Pred: predicting ncRNA-protein interaction using sequence and structural information Suresh, V.; Liu, Liang; Adjeroh, Donald; Zhou, Xiaobo 2015 2015-02-18 COMM-USE N PMC4330382 25609700.0 10.1093/nar/gkv020 bhtl73z9 0.687048 Qi_Z_2018, Chang_2011 Muppirala_2011, Shen_2018
20 Scott_2011 NoD: a Nucleolar localization sequence detector for eukaryotic and viral proteins Scott, Michelle S; Troshin, Peter V; Barton, Geoffrey J 2011 2011-08-03 COMM-USE N PMC3166288 21812952.0 10.1186/1471-2105-12-317 59yvbupx 0.675233 Lee_C_2017, Chang_2011, Qi_Z_2018, Wang_2006
21 Song_2018 iProt-Sub: a comprehensive package for accurately mapping and predicting protease-specific substrates and cleavage sites Song, Jiangning; Wang, Yanan; Li, Fuyi; Akutsu, Tatsuya; Rawlings, Neil D; Webb, Geoffrey I; Chou, Kuo-Chen 2018 2018-04-19 COMM-USE N PMC6556904 29897410.0 10.1093/bib/bby028 78vjzrpx 0.670094 Cho_Y_2005, Chang_2011, Qi_Z_2018, Dai_Q_2012 Choo_2009
22 Lockwood_2011 Neighborhood Properties Are Important Determinants of Temperature Sensitive Mutations Lockwood, Svetlana; Krishnamoorthy, Bala; Ye, Ping 2011 2011-12-02 None N PMC3229608 22164302.0 10.1371/journal.pone.0028507 v1p4ut66 0.626946 Chang_2011, Qi_Z_2018, Saw_A_2019, Dai_Q_2012
23 Wang_2018 Prediction of RNA-protein interactions using conjoint triad feature and chaos game representation Wang, Hongchu; Wu, Pengfei 2018 2018-08-17 COMM-USE N PMC6984769 30117758.0 10.1080/21655979.2018.1470721 ldze0a22 0.613570 Lee_C_2017, Qi_Z_2018, Chang_2011, Saw_A_2019, Dai_Q_2012 Muppirala_2011, Suresh_2015, Shen_2018, Xiao_2017
24 Milanetti_2020 In-Silico evidence for two receptors based strategy of SARS-CoV-2 Edoardo Milanetti; Mattia Miotto; Lorenzo Di Rienzo; Michele Monti; Giorgio Gosti; Giancarlo Ruocco 2020 2020-03-27 BioRxiv Y 10.1101/2020.03.24.006197 ob37jivi 0.582781 Qi_Z_2018, Chang_2011, Dai_Q_2012, Saw_A_2019
25 Yang_2007 Predicting Palmitoylation Sites Using a Regularised Bio-basis Function Neural Network Yang, Zheng Rong 2007 2007-01-01 PMC N PMC7120480 10.1007/978-3-540-72031-7_37 7qriyc1a 0.573232 Saw_A_2019, Dai_Q_2012, Qi_Z_2018, Chang_2011, Feng_2010 van_Dijk_2008, Zhang_2018
26 Mu_Z_2019 DCGR: feature extractions from protein sequences based on CGR via remodeling multiple information Mu, Zengchao; Yu, Ting; Qi, Enfeng; Liu, Juntao; Li, Guojun 2019 2019-06-20 COMM-USE N PMC6587251 31221087.0 10.1186/s12859-019-2943-x ut9z9eo7 0.565937 Qi_Z_2018, Saw_A_2019, Dai_Q_2012, Chang_2011, Lee_C_2017 Li_C_2018, Lee_B_2009, Jia_J_2016
27 Xiao_2005 Using cellular automata images and pseudo amino acid composition to predict protein subcellular location Xiao, X.; Shao, S.; Ding, Y.; Huang, Z.; Chou, K.-C. 2005 2005-07-28 PMC N PMC7087770 16044193.0 10.1007/s00726-005-0225-6 fsh3gsvd 0.563120 Qi_Z_2018, Lee_C_2017, Chang_2011, Liou_2013, Kirillova_2009 Nakai_1992, Choo_2009, van_Dijk_2008, Li_C_2018
28 Li_C_2018 Protein Sequence Comparison and DNA-binding Protein Identification with Generalized PseAAC and Graphical Representation Li, Chun; Zhao, Jialing; Wang, Changzhong; Yao, Yuhua 2018 2018-02-23 NONCOMM N PMC5930480 29380690.0 10.2174/1386207321666180130100838 u1imic5l 0.554277 Saw_A_2019, Qi_Z_2018, Chang_2011, Dai_Q_2012, Lee_C_2017
29 Jia_J_2016 iPPBS-Opt: A Sequence-Based Ensemble Classifier for Identifying Protein-Protein Binding Sites by Optimizing Imbalanced Training Datasets Jia, Jianhua; Liu, Zi; Xiao, Xuan; Liu, Bingxiang; Chou, Kuo-Chen 2016 2016-01-19 COMM-USE N PMC6274413 26797600.0 10.3390/molecules21010095 c3ewuebx 0.502995 Qi_Z_2018, Chang_2011 Xiao_2017, Zhang_2018
30 Shulman-Peleg_2004 Recognition of Functional Sites in Protein Structures Shulman-Peleg, Alexandra; Nussinov, Ruth; Wolfson, Haim J. 2004 2004-06-04 PMC N PMC7126412 15147845.0 10.1016/j.jmb.2004.04.012 66qoykl1 0.495980 Chang_2011, Qi_Z_2018
31 Plewczyński_2008 The interactome: Predicting the protein-protein interactions in cells Plewczyński, Dariusz; Ginalski, Krzysztof 2008 2008-10-06 PMC N PMC6275871 18839074.0 10.2478/s11658-008-0024-7 0ec2xunt 0.492799 Qi_Z_2018, Chang_2011 van_Dijk_2008
32 Xiao_2005 Using cellular automata to generate image representation for biological sequences Xiao, X.; Shao, S.; Ding, Y.; Huang, Z.; Chen, X.; Chou, K.-C. 2005 2005-02-10 PMC N PMC7088382 15700108.0 10.1007/s00726-004-0154-9 54ioyzbc 0.485631 Qi_Z_2018, Chang_2011, Montgomery_2004, Lee_C_2017, Liou_2013 Xiao_2005, Song_2005
33 Al-Ssulami_2020 CodSeqGen: A tool for generating synonymous coding sequences with desired GC-contents Al-Ssulami, Abdulrakeeb M.; Azmi, Aqil M.; Hussain, Muhammad 2020 2020-01-31 PMC N PMC7127556 30738198.0 10.1016/j.ygeno.2019.02.002 64zqe4cz 0.473835 Chang_2011
34 De_Ferrari_2014 From sequence to enzyme mechanism using multi-label machine learning De Ferrari, Luna; Mitchell, John BO 2014 2014-05-19 COMM-USE N PMC4229970 24885296.0 10.1186/1471-2105-15-150 yjrs7c38 0.470770 Wang_2006, Qi_Z_2018, Saw_A_2019
35 Xiao_2017 Prediction of lncRNA-protein interactions using HeteSim scores based on heterogeneous networks Xiao, Yun; Zhang, Jingpu; Deng, Lei 2017 2017-06-16 COMM-USE N PMC5473862 28623317.0 10.1038/s41598-017-03986-1 qyd6qyjf 0.458325 Chang_2011, Saw_A_2019, Qi_Z_2018, Dai_Q_2012, Sen_D_2018 Suresh_2015
36 Cho_Y_2005 Rule Generation Using NN and GA for SARS-CoV Cleavage Site Prediction Cho, Yeon-Jin; Kim, Hyeoncheol 2005 2005-01-01 PMC N PMC7122303 10.1007/11553939_111 my2l85bn 0.458313 Cho_Y_2005, Chang_2011, Liou_2013
37 Chou_2011 Some remarks on protein attribute prediction and pseudo amino acid composition Chou, Kuo-Chen 2011 2011-03-21 PMC N PMC7125570 21168420.0 10.1016/j.jtbi.2010.12.024 2scgsmsc 0.434131 Lee_C_2017, Qi_Z_2018, Chang_2011, Sen_D_2018 Choo_2009, Jia_J_2016, Xiao_2005, De_Ferrari_2014
38 Cho_Y_2005 Cleavage Site Analysis Using Rule Extraction from Neural Networks Cho, Yeun-Jin; Kim, Hyeoncheol 2005 2005-01-01 PMC N PMC7114972 10.1007/11539087_132 gc9hevy5 0.430876 Cho_Y_2005, Qi_Z_2018, Liou_2013 Cho_Y_2005
39 Reddy_2007 Positional clustering improves computational binding site detection and identifies novel cis-regulatory sites in mammalian GABA(A) receptor subunit genes Reddy, Timothy E.; Shakhnovich, Boris E.; Roberts, Daniel S.; Russek, Shelley J.; DeLisi, Charles 2007 2007-01-03 NONCOMM N PMC1807961 17204484.0 10.1093/nar/gkl1062 m56agj4z 0.420210 Chang_2011, Qi_Z_2018, Dai_Q_2012
40 Alguwaizani_2018 Predicting Interactions between Virus and Host Proteins Using Repeat Patterns and Composition of Amino Acids Alguwaizani, Saud; Park, Byungkyu; Zhou, Xiang; Huang, De-Shuang; Han, Kyungsook 2018 2018-05-09 COMM-USE N PMC5966669 29854357.0 10.1155/2018/1391265 0dxrai3j 0.408352 Lee_C_2017, Chang_2011, Sen_D_2018 Zhou_2018
41 Hung_2006 Alignment using genetic programming with causal trees for identification of protein functions Hung, Chun-Min; Huang, Yueh-Min; Chang, Ming-Shi 2006 2006-09-01 PMC N PMC7117053 10.1016/j.na.2005.09.048 6l688krc 0.401178 Chang_2011, Qi_Z_2018, Saw_A_2019, Dai_Q_2012 Lee_B_2009, Li_C_2018
42 Kliger_2008 Predicting proteolytic sites in extracellular proteins: only halfway there Kliger, Yossef; Gofer, Eyal; Wool, Assaf; Toporik, Amir; Apatoff, Avihay; Olshansky, Moshe 2008 2008-04-15 NONCOMM N PMC7109841 18321887.0 10.1093/bioinformatics/btn084 ol2du7ph 0.399385 Lee_C_2017 Choo_2009
43 Kumar_2017 Prediction of endoplasmic reticulum resident proteins using fragmented amino acid composition and support vector machine Kumar, Ravindra; Kumari, Bandana; Kumar, Manish 2017 2017-09-04 COMM-USE N PMC5588793 28890846.0 10.7717/peerj.3561 t54zftal 0.392767
44 Xie_X_2012 Protein sequence analysis based on hydropathy profile of amino acids Xie, Xiao-li; Zheng, Li-fei; Yu, Ying; Liang, Li-ping; Guo, Man-cai; Song, John; Yuan, Zhi-fa 2012 2012-01-27 PMC N PMC3274743 22302429.0 10.1631/jzus.b1100052 g1ob16b9 0.388857 Saw_A_2019, Qi_Z_2018, Chang_2011, Dai_Q_2012
45 Zhang_2007 Estimating residue evolutionary conservation by introducing von Neumann entropy and a novel gap-treating approach Zhang, S.-W.; Zhang, Y.-L.; Pan, Q.; Cheng, Y.-M.; Chou, K.-C. 2007 2007-08-21 PMC N PMC7088136 17710364.0 10.1007/s00726-007-0586-0 7bh8222u 0.381550 Qi_Z_2018, Chang_2011, Dai_Q_2012, Feng_2010 Pessia_2015, Altschul_1991
46 Hu_L_2011 Predicting Biological Functions of Compounds Based on Chemical-Chemical Interactions Hu, Le-Le; Chen, Chen; Huang, Tao; Cai, Yu-Dong; Chou, Kuo-Chen 2011 2011-12-29 COMM-USE N PMC3248422 22220213.0 10.1371/journal.pone.0029491 0mn1gbll 0.375421 Qi_Z_2018, Chang_2011, Lee_C_2017, Saw_A_2019 Wang_2018
47 Nakai_1992 A knowledge base for predicting protein localization sites in eukaryotic cells Nakai, Kenta; Kanehisa, Minoru 1992 1992-12-31 PMC N PMC7134799 1478671.0 10.1016/s0888-7543(05)80111-9 98oo0bkl 0.364921 Qi_Z_2018, Chang_2011, Saw_A_2019, Lee_C_2017, Dai_Q_2012 van_Dijk_2008, Lee_B_2009, Choo_2009, Scott_2011
48 Shen_2006 Probabilistic analysis of the frequencies of amino acid pairs within characterized protein sequences Shen, Shiyi; Kai, Bo; Ruan, Jishou; Torin Huzil, J.; Carpenter, Eric; Tuszynski, Jack A. 2006 2006-10-15 PMC N PMC7127678 10.1016/j.physa.2006.03.004 hjo78o1q 0.358200 Chang_2011, Saw_A_2019, Lee_C_2017, Qi_Z_2018
49 Dinkel_2011 ELM—the database of eukaryotic linear motifs Dinkel, Holger; Michael, Sushama; Weatheritt, Robert J.; Davey, Norman E.; Van Roey, Kim; Altenberg, Brigitte; Toedt, Grischa; Uyar, Bora; Seiler, Markus; Budd, Aidan; Jödicke, Lisa; Dammert, Marcel A.; Schroeter, Christian; Hammer, Maria; Schmidt, Tobias; Jehl, Peter; McGuigan, Caroline; Dymecka, Magdalena; Chica, Claudia; Luck, Katja; Via, Allegra; Chatr-aryamontri, Andrew; Haslam, Niall; Grebnev, Gleb; Edwards, Richard J.; Steinmetz, Michel O.; Meiselbach, Heike; Diella, Francesca; Gibson, Toby J. 2011 2011-11-21 NONCOMM N PMC3245074 22110040.0 10.1093/nar/gkr1064 ppzxvykb 0.338062 Wang_2006
50 Choo_2009 A comprehensive assessment of N-terminal signal peptides prediction methods Choo, Khar Heng; Tan, Tin Wee; Ranganathan, Shoba 2009 2009-12-03 COMM-USE N PMC2788353 19958512.0 10.1186/1471-2105-10-s15-s2 2dbpm0nt 0.337763 Saw_A_2019, Chang_2011, Lee_C_2017, Qi_Z_2018, Dai_Q_2012 van_Dijk_2008
51 Zhou_2018 A generalized approach to predicting protein-protein interactions between virus and host Zhou, Xiang; Park, Byungkyu; Choi, Daesik; Han, Kyungsook 2018 2018-08-13 COMM-USE N PMC6101077 30367586.0 10.1186/s12864-018-4924-2 4uvezfqm 0.330133 Chang_2011
52 Yang_2009 Peptide Bioinformatics- Peptide Classification Using Peptide Machines Yang, Zheng Rong 2009 2009-01-01 PMC N PMC7122642 19065810.0 10.1007/978-1-60327-101-1_9 hkvll3xh 0.318403 Sen_D_2018, Liou_2013, Lee_C_2017 Cai_C_2006, Lee_B_2009, Choo_2009
53 Zemla_2011 StralSV: assessment of sequence variability within similar 3D structures and application to polio RNA-dependent RNA polymerase Zemla, Adam T; Lang, Dorothy M; Kostova, Tanya; Andino, Raul; Ecale Zhou, Carol L 2011 2011-06-02 COMM-USE N PMC3121648 21635786.0 10.1186/1471-2105-12-226 s7kzp795 0.317472 Chang_2011, Lee_C_2017, Qi_Z_2018, Saw_A_2019
54 Ehrt_2018 A benchmark driven guide to binding site comparison: An exhaustive evaluation using tailor-made data sets (ProSPECCTs) Ehrt, Christiane; Brinkjost, Tobias; Koch, Oliver 2018 2018-11-08 None N PMC6224041 30408032.0 10.1371/journal.pcbi.1006483 4y5mnok8 0.310112 Sen_D_2018, Webb_2014, Liou_2013 Zhang_2018
55 Liu_H_2008 A new approach to the prediction of transmembrane structures Liu, HongDe; Wang, Rui; Lu, XiaoQuan; Chen, Jing; Liu, Xiuhui; Ding, Lan 2008 2008-05-23 PMC N PMC7088861 10.1007/s11434-008-0055-5 n10ia3j3 0.301214 Qi_Z_2018, Saw_A_2019, Lee_C_2017 Cai_C_2006, Choo_2009
56 Pfab_2020 DeepTracer: Predicting Backbone Atomic Structure from High Resolution Cryo-EM Density Maps of Protein Complexes Jonas Pfab; Dong Si 2020 2020-02-13 BioRxiv N 10.1101/2020.02.12.946772 er6lz09f 0.300949 Qi_Z_2018, Chang_2011, Saw_A_2019, Liao_2006, Dai_Q_2012 Zhong_2020