Topic 07 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 47 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Choby_2018 Molecular Basis for the Evolution of Species-Specific Hemoglobin Capture by Staphylococcus aureus Choby, Jacob E.; Buechi, Hanna B.; Farrand, Allison J.; Skaar, Eric P.; Barber, Matthew F. 2018 2018-11-20 COMM-USE N PMC6247092 30459189.0 10.1128/mbio.01524-18 4c8lauif 0.991634 Choby_2018
2 Choby_2018 Molecular basis for the evolution of species-specific hemoglobin capture by pathogenic Staphylococcus Jacob E. Choby; Hanna B. Buechi; Allison J. Farrand; Eric P. Skaar; Matthew F. Barber 2018 2018-06-07 BioRxiv N 10.1101/339705 ieh5cvw1 0.991634 Choby_2018
3 Wang_2016 Expansion and Functional Divergence of AP2 Group Genes in Spermatophytes Determined by Molecular Evolution and Arabidopsis Mutant Analysis Wang, Pengkai; Cheng, Tielong; Lu, Mengzhu; Liu, Guangxin; Li, Meiping; Shi, Jisen; Lu, Ye; Laux, Thomas; Chen, Jinhui 2016 2016-09-20 COMM-USE N PMC5029118 27703459.0 10.3389/fpls.2016.01383 6a18qznx 0.898319 Hänske_2020
4 McLellan_2005 Conservation of pregnancy-specific glycoprotein (PSG) N domains following independent expansions of the gene families in rodents and primates McLellan, Andrew S; Zimmermann, Wolfgang; Moore, Tom 2005 2005-06-29 COMM-USE N PMC1185527 15987510.0 10.1186/1471-2148-5-39 3ylcev0n 0.891048 Hänske_2020 Chang_2013
5 Hänske_2020 Natural selection supports escape from concerted evolution of a recently duplicated CEACAM1 paralog in the ruminant CEA gene family Hänske, Jana; Hammacher, Tim; Grenkowitz, Franziska; Mansfeld, Martin; Dau, Tung Huy; Maksimov, Pavlo; Friedrich, Christin; Zimmermann, Wolfgang; Kammerer, Robert 2020 2020-02-25 COMM-USE N PMC7042247 32099040.0 10.1038/s41598-020-60425-4 6p55tzyj 0.872421 Kammerer_2010, Kammerer_2017, Kammerer_2007
6 Kammerer_2007 Species-specific evolution of immune receptor tyrosine based activation motif-containing CEACAM1-related immune receptors in the dog Kammerer, Robert; Popp, Tanja; Härtle, Stefan; Singer, Bernhard B; Zimmermann, Wolfgang 2007 2007-10-18 COMM-USE N PMC2110893 17945019.0 10.1186/1471-2148-7-196 7gk8uzo0 0.821094 Kammerer_2010
7 Kammerer_2010 Coevolution of activating and inhibitory receptors within mammalian carcinoembryonic antigen families Kammerer, Robert; Zimmermann, Wolfgang 2010 2010-02-04 COMM-USE N PMC2832619 20132533.0 10.1186/1741-7007-8-12 jsp7w20e 0.820567 Hänske_2020 Kammerer_2007, Kammerer_2017, Zimmermann_2016
8 Zhang_2012 Evolutionary Dynamics of the Interferon-Induced Transmembrane Gene Family in Vertebrates Zhang, Zhao; Liu, Jun; Li, Meng; Yang, Hui; Zhang, Chiyu 2012 2012-11-15 COMM-USE N PMC3499546 23166625.0 10.1371/journal.pone.0049265 99hjjqjn 0.773757 Hänske_2020
9 Kammerer_2017 Recent expansion and adaptive evolution of the carcinoembryonic antigen family in bats of the Yangochiroptera subgroup Kammerer, Robert; Mansfeld, Martin; Hänske, Jana; Mißbach, Sophie; He, Xiaocui; Köllner, Bernd; Mouchantat, Susan; Zimmermann, Wolfgang 2017 2017-09-11 COMM-USE N PMC5594555 28893191.0 10.1186/s12864-017-4106-7 xog2y6wk 0.716759 Hänske_2020 Kammerer_2010, Kammerer_2007
10 Cheng_2014 Molecular Evolution of the Primate α-/θ-Defensin Multigene Family Cheng, Dong-Qiang; Li, Ying; Huang, Jing-Fei 2014 2014-05-12 COMM-USE N PMC4018336 24819937.0 10.1371/journal.pone.0097425 ddm6j13m 0.705793 Hänske_2020
11 Daugherty_2014 Rapid Evolution of PARP Genes Suggests a Broad Role for ADP-Ribosylation in Host-Virus Conflicts Daugherty, Matthew D.; Young, Janet M.; Kerns, Julie A.; Malik, Harmit S. 2014 2014-05-29 COMM-USE N PMC4038475 24875882.0 10.1371/journal.pgen.1004403 c3psvuzp 0.703087
12 Zimmermann_2016 Coevolution of paired receptors in Xenopus carcinoembryonic antigen-related cell adhesion molecule families suggests appropriation as pathogen receptors Zimmermann, Wolfgang; Kammerer, Robert 2016 2016-11-16 COMM-USE N PMC5112662 27852220.0 10.1186/s12864-016-3279-9 rhkd15s4 0.653557 Kammerer_2010, Kammerer_2007
13 Mei_Q_2015 Evolutionary History of the Photolyase/Cryptochrome Superfamily in Eukaryotes Mei, Qiming; Dvornyk, Volodymyr 2015 2015-09-09 COMM-USE N PMC4564169 26352435.0 10.1371/journal.pone.0135940 sdj8n4pd 0.646915
14 Carey_2020 Conflicts with diarrheal pathogens trigger rapid evolution of an intestinal signaling axis Clayton M. Carey; Sarah E. Apple; Zoe A. Hilbert; Michael S. Kay; Nels C. Elde 2020 2020-03-30 BioRxiv N 10.1101/2020.03.29.014761 ju826pao 0.581690
15 Mozzi_2015 OASes and STING: Adaptive Evolution in Concert Mozzi, Alessandra; Pontremoli, Chiara; Forni, Diego; Clerici, Mario; Pozzoli, Uberto; Bresolin, Nereo; Cagliani, Rachele; Sironi, Manuela 2015 2015-03-09 COMM-USE N PMC4419793 25752600.0 10.1093/gbe/evv046 tijzhq9b 0.575386
16 Chang_2013 Widespread Divergence of the CEACAM/PSG Genes in Vertebrates and Humans Suggests Sensitivity to Selection Chang, Chia Lin; Semyonov, Jenia; Cheng, Po Jen; Huang, Shang Yu; Park, Jae Il; Tsai, Huai-Jen; Lin, Cheng-Yung; Grützner, Frank; Soong, Yung Kuei; Cai, James J.; Hsu, Sheau Yu Teddy 2013 2013-04-16 COMM-USE N PMC3628338 23613906.0 10.1371/journal.pone.0061701 1jogs44p 0.509713 Hänske_2020 Kammerer_2010, Kammerer_2007
17 Kosiol_2008 Patterns of Positive Selection in Six Mammalian Genomes Kosiol, Carolin; Vinař, Tomáš; da Fonseca, Rute R.; Hubisz, Melissa J.; Bustamante, Carlos D.; Nielsen, Rasmus; Siepel, Adam 2008 2008-08-01 None N PMC2483296 18670650.0 10.1371/journal.pgen.1000144 es5t9kvt 0.491800 Evans_2020
18 Lemos_de_Matos_2013 Positive Evolutionary Selection On the RIG-I-Like Receptor Genes in Mammals Lemos de Matos, Ana; McFadden, Grant; Esteves, Pedro J. 2013 2013-11-27 COMM-USE N PMC3842351 24312370.0 10.1371/journal.pone.0081864 gi2kswai 0.424320
19 Shu_C_2015 Characterization of the duplicate L-SIGN and DC-SIGN genes in miiuy croaker and evolutionary analysis of L-SIGN in fishes Shu, Chang; Wang, Shanchen; Xu, Tianjun 2015 2015-05-31 PMC N PMC7124703 25596146.0 10.1016/j.dci.2015.01.004 waz0k0ms 0.410913
20 Callaghan_2007 Haplotypic diversity in human CEACAM genes: effects on susceptibility to meningococcal disease Callaghan, M J; Rockett, K; Banner, C; Haralambous, E; Betts, H; Faust, S; Maiden, M C J; Kroll, J S; Levin, M; Kwiatkowski, D P; Pollard, A J 2007 2007-10-25 PMC N PMC7094765 17960155.0 10.1038/sj.gene.6364442 e5lyy8lg 0.364877 Boily-Larouche_2007
21 Malone_2006 Glia Expression of MHC During CNS Infection by Neurotropic Coronavirus Malone, Karen E.; Ramakrishna, Chandran; Gonzalez, J.-M.; Stohlman, Stephan A.; Bergmann, Cornelia C. 2006 2006-01-01 PMC N PMC7123808 17037595.0 10.1007/978-0-387-33012-9_99 2d7zogi9 0.356073
22 He_D_2016 Positive selection of the TRIM family regulatory region in primate genomes He, Dan-Dan; Lu, Yueer; Gittelman, Rachel; Jin, Yabin; Ling, Fei; Joshua, Akey 2016 2016-10-12 PMC N PMC5069514 27733547.0 10.1098/rspb.2016.1602 5vx5u24q 0.341063
23 Li_L_2018 Genomic organization and adaptive evolution of IGHC genes in marine mammals Li, Lili; Rong, Xinghua; Li, Guiting; Wang, Yingying; Chen, Bingyao; Ren, Wenhua; Yang, Guang; Xu, Shixia 2018 2018-07-31 None N PMC7112648 29723770.0 10.1016/j.molimm.2018.04.011 c94gpfrl 0.329811 Kammerer_2010
24 van_Hemert_2007 Different rates of (non-)synonymous mutations in astrovirus genes; correlation with gene function van Hemert, Formijn J; Lukashov, Vladimir V; Berkhout, Ben 2007 2007-03-07 COMM-USE N PMC1828050 17343744.0 10.1186/1743-422x-4-25 o76qvk49 0.315859 Gu_W_2004, Liu_Y_2010 Sheikh_2020