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Longdon_2017 |
Host shifts result in parallel genetic changes when viruses evolve in closely related species |
Ben Longdon; Jonathan P Day; Joel M Alves; Sophia CL Smith; Thomas M Houslay; John E McGonigle; Lucia Tagliaferri; Francis M Jiggins |
2017 |
2017-11-28 |
BioRxiv |
N |
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10.1101/226175 |
ithoxu6k |
0.986651 |
Longdon_2018, Bahir_2009, Wang_2018, Luis_2015 |
Longdon_2018, Longdon_2014, Becker_2019 |
| 2 |
Roberts_2018 |
Changes in temperature alter the potential outcomes of virus host shifts |
Roberts, Katherine E.; Hadfield, Jarrod D.; Sharma, Manmohan D.; Longdon, Ben |
2018 |
2018-10-19 |
COMM-USE |
N |
PMC6209381 |
30339695.0 |
10.1371/journal.ppat.1007185 |
hxxizipk |
0.978175 |
Longdon_2018, Longdon_2017, Roberts_2018, Bahir_2009 |
Roberts_2018, Longdon_2018, Longdon_2017, Becker_2019 |
| 3 |
Longdon_2018 |
Host shifts result in parallel genetic changes when viruses evolve in closely related species |
Longdon, Ben; Day, Jonathan P.; Alves, Joel M.; Smith, Sophia C. L.; Houslay, Thomas M.; McGonigle, John E.; Tagliaferri, Lucia; Jiggins, Francis M. |
2018 |
2018-04-12 |
None |
N |
PMC5897010 |
29649296.0 |
10.1371/journal.ppat.1006951 |
zlq4hucn |
0.957392 |
Longdon_2017, Bahir_2009, Wang_2018, Luis_2015 |
Longdon_2017, Longdon_2014, Becker_2019 |
| 4 |
Roberts_2018 |
Changes in temperature alter susceptibility to a virus following a host shift |
Katherine E. Roberts; Jarrod D. Hadfield; Manmohan D. Sharma; Ben Longdon |
2018 |
2018-06-28 |
BioRxiv |
N |
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10.1101/358564 |
7tulgjhy |
0.944414 |
Longdon_2018, Longdon_2017, Roberts_2018 |
Roberts_2018, Longdon_2018, Longdon_2017, Becker_2019 |
| 5 |
Albery_2019 |
Predicting the global mammalian viral sharing network using phylogeography |
Gregory F Albery; Evan A Eskew; Noam Ross; Kevin J Olival |
2019 |
2019-08-12 |
BioRxiv |
N |
|
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10.1101/732255 |
21x337m4 |
0.852500 |
Wang_2018, Luis_2015, Gay_N_2014 |
Becker_2019, Olival_2017, Turmelle_2010, Kreuder_Johnson_2015 |
| 6 |
Wells_2018 |
Distinct spread of DNA and RNA viruses among mammals amid prominent role of domestic species |
Konstans Wells; Serge Morand; Maya Wardeh; Matthew Baylis |
2018 |
2018-09-19 |
BioRxiv |
N |
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10.1101/421511 |
sp4yarbi |
0.843723 |
Wang_2018 |
Wu_Z_2018, Olival_2017, Kreuder_Johnson_2015 |
| 7 |
Geoghegan_2017 |
Comparative analysis estimates the relative frequencies of co-divergence and cross-species transmission within viral families |
Geoghegan, Jemma L.; Duchêne, Sebastián; Holmes, Edward C. |
2017 |
2017-02-08 |
COMM-USE |
N |
PMC5319820 |
28178344.0 |
10.1371/journal.ppat.1006215 |
1u44tdrj |
0.832556 |
Wang_2018 |
Longdon_2018, Leopardi_2018, Longdon_2017 |
| 8 |
Wells_2019 |
Distinct spread of DNA and RNA viruses among mammals amid prominent role of domestic species |
Wells, Konstans; Morand, Serge; Wardeh, Maya; Baylis, Matthew |
2019 |
2019-12-19 |
PMC |
N |
PMC7165700 |
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10.1111/geb.13045 |
s5n7ecr5 |
0.784506 |
Wang_2018, Wang_2015 |
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| 9 |
Gelbart_2017 |
Evolutionary rate shifts suggest species-specific adaptation events in HIV-1 and SIV |
Maoz Gelbart; Adi Stern |
2017 |
2017-09-19 |
BioRxiv |
N |
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10.1101/190769 |
npd2qf7m |
0.755387 |
Longdon_2018, Longdon_2017 |
Longdon_2018, Longdon_2017 |
| 10 |
Haven_2013 |
Superinfection reconciles host–parasite association and cross-species transmission |
Haven, James; Park, Andrew William |
2013 |
2013-12-31 |
PMC |
N |
PMC7126234 |
24161558.0 |
10.1016/j.tpb.2013.09.015 |
pu9vd195 |
0.734452 |
Longdon_2018 |
Becker_2019, Wille_2017, Longdon_2018 |
| 11 |
Pulliam_2009 |
Ability to replicate in the cytoplasm predicts zoonotic transmission of livestock viruses |
Pulliam, Juliet R. C.; Dushoff, Jonathan |
2009 |
2009-02-15 |
PMC |
N |
PMC7110041 |
19281304.0 |
10.1086/596510 |
jmjolo9p |
0.733987 |
Wang_2018 |
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van_Hemert_2007 |
Host-related nucleotide composition and codon usage as driving forces in the recent evolution of the Astroviridae |
van Hemert, Formijn J.; Berkhout, Ben; Lukashov, Vladimir V. |
2007 |
2007-05-10 |
PMC |
N |
PMC7127384 |
17188318.0 |
10.1016/j.virol.2006.11.021 |
vlpdirjs |
0.723557 |
Wang_2018 |
Bahir_2009 |
| 13 |
Wang_2018 |
The Expanding Diversity of RNA Viruses in Vertebrates |
Wang, Wenqiang; Han, Guan-Zhu |
2018 |
2018-06-30 |
PMC |
N |
PMC7125577 |
29703494.0 |
10.1016/j.tim.2018.04.003 |
n8zg6rsj |
0.704243 |
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Zhang_2018, Woolhouse_2013 |
| 14 |
Bahir_2009 |
Viral adaptation to host: a proteome-based analysis of codon usage and amino acid preferences |
Bahir, Iris; Fromer, Menachem; Prat, Yosef; Linial, Michal |
2009 |
2009-10-13 |
NONCOMM |
N |
PMC2779085 |
19888206.0 |
10.1038/msb.2009.71 |
629kl04a |
0.691793 |
Sawyer_2012, Longdon_2018 |
Longdon_2018 |
| 15 |
Longdon_2014 |
The Evolution and Genetics of Virus Host Shifts |
Longdon, Ben; Brockhurst, Michael A.; Russell, Colin A.; Welch, John J.; Jiggins, Francis M. |
2014 |
2014-11-06 |
COMM-USE |
N |
PMC4223060 |
25375777.0 |
10.1371/journal.ppat.1004395 |
zfl7pb4t |
0.683722 |
Longdon_2018, Longdon_2017 |
Longdon_2018, Longdon_2017 |
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Pulliam_2008 |
Viral Host Jumps: Moving toward a Predictive Framework |
Pulliam, Juliet R. C. |
2008 |
2008-02-13 |
PMC |
N |
PMC7087992 |
18648800.0 |
10.1007/s10393-007-0149-6 |
m1dkkbq7 |
0.678380 |
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Brierley_2019 |
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Mollentze_2020 |
Dynamics of viral index infections in novel hosts |
Nardus Mollentze; Daniel G. Streicker; Pablo R. Murcia; Katie Hampson; Roman Biek |
2020 |
2020-04-10 |
BioRxiv |
N |
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10.1101/2020.04.09.033928 |
49oco16h |
0.657325 |
Sawyer_2012, Longdon_2018 |
Becker_2019, Plowright_2016 |
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Benmayor_2009 |
Host Mixing and Disease Emergence |
Benmayor, Rebecca; Hodgson, David J.; Perron, Gabriel G.; Buckling, Angus |
2009 |
2009-05-12 |
PMC |
N |
PMC7126095 |
19375316.0 |
10.1016/j.cub.2009.03.023 |
d991ccvr |
0.638807 |
Longdon_2018, Longdon_2017, Bahir_2009 |
Longdon_2018, Longdon_2017 |
| 19 |
McCoy_2003 |
Sympatric speciation in parasites – what is sympatry? |
McCoy, Karen D. |
2003 |
2003-09-30 |
PMC |
N |
PMC7129588 |
12957516.0 |
10.1016/s1471-4922(03)00194-6 |
gpdzxp63 |
0.588790 |
Longdon_2018, Gay_N_2014, Longdon_2017, Luis_2015 |
Becker_2019, Gay_N_2014, Longdon_2018 |
| 20 |
Guy_C_2019 |
Phylogeny matters: revisiting ‘a comparison of bats and rodents as reservoirs of zoonotic viruses’ |
Guy, Cylita; Thiagavel, Jeneni; Mideo, Nicole; Ratcliffe, John M. |
2019 |
2019-02-13 |
None |
N |
PMC6408376 |
30891262.0 |
10.1098/rsos.181182 |
2uwvbgzx |
0.579820 |
Gay_N_2014, McCoy_2003, Bergner_2019, Luis_2015 |
Becker_2019, Wu_Z_2018, Gay_N_2014 |
| 21 |
Anthony_2013 |
A Strategy To Estimate Unknown Viral Diversity in Mammals |
Anthony, Simon J.; Epstein, Jonathan H.; Murray, Kris A.; Navarrete-Macias, Isamara; Zambrana-Torrelio, Carlos M.; Solovyov, Alexander; Ojeda-Flores, Rafael; Arrigo, Nicole C.; Islam, Ariful; Ali Khan, Shahneaz; Hosseini, Parviez; Bogich, Tiffany L.; Olival, Kevin J.; Sanchez-Leon, Maria D.; Karesh, William B.; Goldstein, Tracey; Luby, Stephen P.; Morse, Stephen S.; Mazet, Jonna A. K.; Daszak, Peter; Lipkin, W. Ian |
2013 |
2013-09-03 |
NONCOMM |
N |
PMC3760253 |
24003179.0 |
10.1128/mbio.00598-13 |
6lobyyj4 |
0.565171 |
Wang_2018, Han_B_2016, Gay_N_2014 |
Wu_Z_2018, Dacheux_2014, Olival_2017, Becker_2019 |
| 22 |
Leopardi_2018 |
Interplay between co-divergence and cross-species transmission in the evolutionary history of bat coronaviruses |
Leopardi, Stefania; Holmes, Edward C.; Gastaldelli, Michele; Tassoni, Luca; Priori, Pamela; Scaravelli, Dino; Zamperin, Gianpiero; De Benedictis, Paola |
2018 |
2018-03-31 |
None |
N |
PMC7106311 |
29355607.0 |
10.1016/j.meegid.2018.01.012 |
r0sk55fj |
0.558668 |
Tong_2009, Xu_L_2018, Wang_2018, Wang_2015 |
Becker_2019, Tsoleridis_2019 |
| 23 |
Becker_2019 |
Ecological and evolutionary drivers of hemoplasma infection and bacterial genotype sharing in a Neotropical bat community |
Daniel J. Becker; Kelly A. Speer; Alexis M. Brown; M. Brock Fenton; Alex D. Washburne; Sonia Altizer; Daniel G. Streicker; Raina K. Plowright; Vladimir E. Chizhikov; Nancy B. Simmons; Dmitriy V. Volokhov |
2019 |
2019-12-23 |
BioRxiv |
N |
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10.1101/2019.12.21.885921 |
ts91ivwf |
0.554081 |
Gay_N_2014, Longdon_2018, Longdon_2017, Schountz_2013 |
Wray_2016, Ramírez_2014 |
| 24 |
Lu_L_2018 |
Genetic diversity and cross-species transmission of kobuviruses in Vietnam |
Lu, Lu; Van Dung, Nguyen; Ivens, Alasdair; Bogaardt, Carlijn; O’Toole, Aine; Bryant, Juliet E; Carrique-Mas, Juan; Van Cuong, Nguyen; Anh, Pham Hong; Rabaa, Maia A; Tue, Ngo Tri; Thwaites, Guy E; Baker, Stephen; Simmonds, Peter; Woolhouse, Mark Ej |
2018 |
2018-02-13 |
NONCOMM |
N |
PMC5810437 |
29449965.0 |
10.1093/ve/vey002 |
liuo74xn |
0.518232 |
Tong_2009, Xu_L_2018, Wang_2015 |
Doysabas_2019 |
| 25 |
Meyerson_2018 |
Species-specific vulnerability of RanBP2 shaped the evolution of SIV as it transmitted in African apes |
Meyerson, Nicholas R.; Warren, Cody J.; Vieira, Daniel A. S. A.; Diaz-Griferro, Felipe; Sawyer, Sara L. |
2018 |
2018-03-08 |
COMM-USE |
N |
PMC5843284 |
29518153.0 |
10.1371/journal.ppat.1006906 |
cgbb96pz |
0.510962 |
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Hayward_2018 |
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Bae_S_2011 |
Classification of viral zoonosis through receptor pattern analysis |
Bae, Se-Eun; Son, Hyeon Seok |
2011 |
2011-04-13 |
COMM-USE |
N |
PMC3090355 |
21489240.0 |
10.1186/1471-2105-12-96 |
x6m02voy |
0.495686 |
Wang_2018, Bahir_2009 |
Wu_Z_2018 |
| 27 |
Sawyer_2012 |
A cross-species view on viruses |
Sawyer, Sara L.; Elde, Nels C. |
2012 |
2012-10-01 |
PMC |
N |
PMC3470745 |
22835485.0 |
10.1016/j.coviro.2012.07.003 |
vd242w2o |
0.489538 |
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Brüssow_2012, Becker_2019 |
| 28 |
Lei_B_2014 |
Contrasting Patterns in Mammal–Bacteria Coevolution: Bartonella and Leptospira in Bats and Rodents |
Lei, Bonnie R.; Olival, Kevin J. |
2014 |
2014-03-20 |
COMM-USE |
N |
PMC3961187 |
24651646.0 |
10.1371/journal.pntd.0002738 |
eiio8bfs |
0.487216 |
Kosoy_2010, Gay_N_2014, Tong_2009, Xu_L_2018, Banyard_2013 |
Ramírez_2014, Becker_2019, Wray_2016, Lin_J_2012 |
| 29 |
Zhang_2018 |
The diversity, evolution and origins of vertebrate RNA viruses |
Zhang, Yong-Zhen; Wu, Wei-Chen; Shi, Mang; Holmes, Edward C |
2018 |
2018-08-31 |
PMC |
N |
PMC7102767 |
30114593.0 |
10.1016/j.coviro.2018.07.017 |
ndt8f812 |
0.473900 |
Wang_2018, Wang_2015, Schountz_2013 |
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Lu_L_2019 |
Evolutionary origins of epidemic potential among human RNA viruses |
Lu Lu; Liam Brierley; Gail Robertson; Feifei Zhang; Samantha Lycett; Donald Smith; Margo Chase-Topping; Peter Simmonds; Mark Woolhouse |
2019 |
2019-09-18 |
BioRxiv |
N |
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10.1101/771394 |
42twx4gm |
0.473235 |
Wang_2015 |
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Han_B_2016 |
Global Patterns of Zoonotic Disease in Mammals |
Han, Barbara A.; Kramer, Andrew M.; Drake, John M. |
2016 |
2016-07-31 |
None |
N |
PMC4921293 |
27316904.0 |
10.1016/j.pt.2016.04.007 |
f5daxkcn |
0.455823 |
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Brisson_2011, Hayman_2013, Olival_2017 |
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Woolhouse_2008 |
Temporal trends in the discovery of human viruses |
Woolhouse, Mark E.J; Howey, Richard; Gaunt, Eleanor; Reilly, Liam; Chase-Topping, Margo; Savill, Nick |
2008 |
2008-05-27 |
COMM-USE |
N |
PMC2475551 |
18505720.0 |
10.1098/rspb.2008.0294 |
5blxgsfi |
0.454712 |
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Woolhouse_2012, Olival_2017 |
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Bergner_2019 |
Demographic and environmental drivers of metagenomic viral diversity in vampire bats |
Bergner, Laura M.; Orton, Richard J.; Benavides, Julio A.; Becker, Daniel J.; Tello, Carlos; Biek, Roman; Streicker, Daniel G. |
2019 |
2019-10-23 |
None |
N |
PMC7004108 |
31561274.0 |
10.1111/mec.15250 |
mt7vbonr |
0.447765 |
Gay_N_2014, Luis_2015, Wang_2018 |
Becker_2019, Turmelle_2010, Gay_N_2014, Prada_2019 |
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Gay_N_2014 |
Parasite and viral species richness of Southeast Asian bats: Fragmentation of area distribution matters |
Gay, Noellie; Olival, Kevin J.; Bumrungsri, Sara; Siriaroonrat, Boripat; Bourgarel, Mathieu; Morand, Serge |
2014 |
2014-07-08 |
None |
N |
PMC4142259 |
25161915.0 |
10.1016/j.ijppaw.2014.06.003 |
rcpb2fyy |
0.440489 |
McCoy_2003, Han_B_2016, Luis_2015, Bergner_2019 |
Becker_2019, Prada_2019, Maganga_2014, Turmelle_2010 |
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Foley_2014 |
How and Why Overcome the Impediments to Resolution: Lessons from rhinolophid and hipposiderid Bats |
Foley, Nicole M.; Thong, Vu Dinh; Soisook, Pipat; Goodman, Steven M.; Armstrong, Kyle N.; Jacobs, David S.; Puechmaille, Sébastien J.; Teeling, Emma C. |
2014 |
2014-11-29 |
NONCOMM |
Y |
PMC4769323 |
25433366.0 |
10.1093/molbev/msu329 |
v8xmnfko |
0.437470 |
Xu_L_2018, Whittaker_2017 |
Ramírez_2014, Asano_2016 |
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Olival_2017 |
Host and viral traits predict zoonotic spillover from mammals |
Olival, Kevin J.; Hosseini, Parviez R.; Zambrana-Torrelio, Carlos; Ross, Noam; Bogich, Tiffany L.; Daszak, Peter |
2017 |
2017-06-21 |
PMC |
N |
PMC5570460 |
28636590.0 |
10.1038/nature22975 |
pw4yh922 |
0.437456 |
Wang_2018 |
Kreuder_Johnson_2015, Wu_Z_2018, Wille_2017 |
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Nieto‐Rabiela_2019 |
Viral networks and detection of potential zoonotic viruses in bats and rodents: A worldwide analysis |
Nieto‐Rabiela, Fabiola; Wiratsudakul, Anuwat; Suzán, Gerardo; Rico‐Chávez, Oscar |
2019 |
2019-06-20 |
PMC |
N |
PMC7165641 |
31219223.0 |
10.1111/zph.12618 |
jdv17u86 |
0.435654 |
Luis_2015, Tong_2009 |
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Luis_2015 |
Network analysis of host–virus communities in bats and rodents reveals determinants of cross‐species transmission |
Luis, Angela D.; O'Shea, Thomas J.; Hayman, David T. S.; Wood, James L. N.; Cunningham, Andrew A.; Gilbert, Amy T.; Mills, James N.; Webb, Colleen T. |
2015 |
2015-08-24 |
NONCOMM |
N |
PMC5014217 |
26299267.0 |
10.1111/ele.12491 |
yqc8r3ll |
0.424874 |
Schountz_2013, Longdon_2018, Longdon_2017 |
Gay_N_2014, Becker_2019, Olival_2017 |
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Turmelle_2010 |
Correlates of Viral Richness in Bats (Order Chiroptera) |
Turmelle, Amy S.; Olival, Kevin J. |
2010 |
2010-01-05 |
PMC |
N |
PMC7088156 |
20049506.0 |
10.1007/s10393-009-0263-8 |
9myiiuzd |
0.424019 |
Gay_N_2014, Bergner_2019, Luis_2015, McCoy_2003 |
Gay_N_2014, Becker_2019, Maganga_2014, Bergner_2019 |
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Wohlgemuth_2019 |
Astrovirus evolution and emergence |
Wohlgemuth, Nicholas; Honce, Rebekah; Schultz-Cherry, Stacey |
2019 |
2019-04-30 |
PMC |
N |
PMC7106029 |
30639546.0 |
10.1016/j.meegid.2019.01.009 |
4ismfcjt |
0.422815 |
Wang_2018 |
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Woolhouse_2012 |
Human viruses: discovery and emergence |
Woolhouse, Mark; Scott, Fiona; Hudson, Zoe; Howey, Richard; Chase-Topping, Margo |
2012 |
2012-10-19 |
COMM-USE |
N |
PMC3427559 |
22966141.0 |
10.1098/rstb.2011.0354 |
0i59vlyd |
0.420427 |
Wang_2018, Longdon_2018, Longdon_2017, Mackenzie_2013, Bahir_2009 |
Mackenzie_2013, Wu_Z_2018, Adachi_2007 |
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Bandín_2011 |
Host range, host specificity and hypothesized host shift events among viruses of lower vertebrates |
Bandín, Isabel; Dopazo, Carlos P |
2011 |
2011-05-18 |
COMM-USE |
N |
PMC3125225 |
21592358.0 |
10.1186/1297-9716-42-67 |
yff0lw9n |
0.420013 |
Wang_2018, Longdon_2018 |
Longdon_2018, Longdon_2017, Adachi_2007 |
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Delwart_2012 |
Animal virus discovery: improving animal health, understanding zoonoses, and opportunities for vaccine development |
Delwart, Eric |
2012 |
2012-06-30 |
None |
N |
PMC3378828 |
22463981.0 |
10.1016/j.coviro.2012.02.012 |
dz6ez5mw |
0.404157 |
Wang_2018, Sawyer_2012 |
Wu_Z_2018 |
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Maganga_2014 |
Bat Distribution Size or Shape as Determinant of Viral Richness in African Bats |
Maganga, Gaël D.; Bourgarel, Mathieu; Vallo, Peter; Dallo, Thierno D.; Ngoagouni, Carine; Drexler, Jan Felix; Drosten, Christian; Nakouné, Emmanuel R.; Leroy, Eric M.; Morand, Serge |
2014 |
2014-06-24 |
COMM-USE |
N |
PMC4069033 |
24959855.0 |
10.1371/journal.pone.0100172 |
1rx7p4rs |
0.397595 |
Gay_N_2014, Luis_2015, Bergner_2019, McCoy_2003 |
Gay_N_2014, Turmelle_2010, Becker_2019, Ramírez_2014 |
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Vanderford_2006 |
Adaptation of a Diverse Simian Immunodeficiency Virus Population to a New Host Is Revealed through a Systematic Approach to Identify Amino Acid Sites under Selection |
Vanderford, Thomas H.; Demma, Linda J.; Feinberg, Mark B.; Staprans, Silvija I.; Logsdon, John M. |
2006 |
2006-12-11 |
PMC |
N |
PMC7107550 |
17159231.0 |
10.1093/molbev/msl194 |
79323mzd |
0.395082 |
Wang_2018, Bahir_2009 |
Demma_2006 |
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Aguas_2013 |
Feature Selection Methods for Identifying Genetic Determinants of Host Species in RNA Viruses |
Aguas, Ricardo; Ferguson, Neil M. |
2013 |
2013-10-10 |
COMM-USE |
N |
PMC3794897 |
24130470.0 |
10.1371/journal.pcbi.1003254 |
ltp17r6v |
0.375820 |
Wang_2018 |
Becker_2019, Olival_2017 |
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Wille_2019 |
Virome heterogeneity and connectivity in waterfowl and shorebird communities |
Wille, Michelle; Shi, Mang; Klaassen, Marcel; Hurt, Aeron C.; Holmes, Edward C. |
2019 |
2019-06-25 |
None |
N |
PMC6775988 |
31239538.0 |
10.1038/s41396-019-0458-0 |
9flgtv0z |
0.369081 |
Wang_2015, Xu_L_2018 |
Wille_2019, Becker_2019 |
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Nieto-Rabiela_2018 |
Viral metacommunities associated to bats and rodents at different spatial scales |
Nieto-Rabiela, F.; Suzán, G.; Wiratsudakul, A.; Rico-Chávez, O. |
2018 |
2018-12-30 |
COMM-USE |
N |
PMC7091747 |
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10.1556/168.2018.19.2.9 |
nu8ckeud |
0.366377 |
Bergner_2019, Gay_N_2014 |
Turmelle_2010, Becker_2019, Gay_N_2014, Prada_2019 |
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Schläppi_2019 |
Foodborne Transmission of Deformed Wing Virus to Ants (Myrmica rubra) |
Schläppi, Daniel; Lattrell, Patrick; Yañez, Orlando; Chejanovsky, Nor; Neumann, Peter |
2019 |
2019-11-07 |
COMM-USE |
N |
PMC6920936 |
31703426.0 |
10.3390/insects10110394 |
p95vzcoy |
0.357560 |
Longdon_2018, Schountz_2013, Longdon_2017 |
Wray_2016, Epstein_2013 |
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Stewart_2017 |
A Functional Genomics Approach to Henipavirus Research: The Role of Nuclear Proteins, MicroRNAs and Immune Regulators in Infection and Disease |
Stewart, Cameron R.; Deffrasnes, Celine; Foo, Chwan Hong; Bean, Andrew G. D.; Wang, Lin-Fa |
2017 |
2017-07-04 |
PMC |
N |
PMC7122743 |
28674944.0 |
10.1007/82_2017_28 |
q70rky3r |
0.355168 |
Weaver_2004 |
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Ingala_2018 |
Bats Are an Untapped System for Understanding Microbiome Evolution in Mammals |
Ingala, Melissa R.; Simmons, Nancy B.; Perkins, Susan L. |
2018 |
2018-09-19 |
COMM-USE |
N |
PMC6147128 |
30232167.0 |
10.1128/msphere.00397-18 |
evjp6ado |
0.354577 |
Wang_2018, Gay_N_2014 |
Becker_2019 |
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Demma_2006 |
Evolution of the uniquely adaptable lentiviral envelope in a natural reservoir host |
Demma, LJ; Vanderford, TH; Logsdon, JM; Feinberg, MB; Staprans, SI |
2006 |
2006-03-20 |
COMM-USE |
N |
PMC1431560 |
16549011.0 |
10.1186/1742-4690-3-19 |
stgj6olw |
0.348451 |
Wang_2018 |
|
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Sjodin_2019 |
Quantitative Delineation of Herpesviruses in Bats for use in Ecological Studies |
Anna R. Sjodin; Michael R. Willig; Simon J. Anthony |
2019 |
2019-11-26 |
BioRxiv |
N |
|
|
10.1101/856518 |
21ldw4lk |
0.344963 |
Wang_2018, Gay_N_2014, Han_B_2016, Sawyer_2012, Bergner_2019 |
Becker_2019, Wray_2016, Gay_N_2014 |
| 54 |
Manara_2019 |
Microbial genomes from non-human primate gut metagenomes expand the primate-associated bacterial tree of life with over 1000 novel species |
Manara, Serena; Asnicar, Francesco; Beghini, Francesco; Bazzani, Davide; Cumbo, Fabio; Zolfo, Moreno; Nigro, Eleonora; Karcher, Nicolai; Manghi, Paolo; Metzger, Marisa Isabell; Pasolli, Edoardo; Segata, Nicola |
2019 |
2019-12-28 |
COMM-USE |
N |
PMC6935492 |
31883524.0 |
10.1186/s13059-019-1923-9 |
ehcu68cg |
0.341989 |
Wang_2018, Delwart_2012, Han_B_2016, Gay_N_2014 |
|
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Frank_2020 |
Exceptional diversity and selection pressure on SARS-CoV and SARS-CoV-2 host receptor in bats compared to other mammals |
Hannah K. Frank; David Enard; Scott D. Boyd |
2020 |
2020-04-20 |
BioRxiv |
Y |
|
|
10.1101/2020.04.20.051656 |
ijsn8d7b |
0.339469 |
Bahir_2009, Longdon_2018, Longdon_2017 |
|
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Gonzalez_2007 |
Arenaviruses |
Gonzalez, J. P.; Emonet, S.; Lamballerie, X. de; Charrel, R. |
2007 |
2007-01-01 |
PMC |
N |
PMC7122678 |
17848068.0 |
10.1007/978-3-540-70962-6_11 |
f2vds1n7 |
0.338991 |
Wang_2018, Xu_L_2018 |
Wu_Z_2018 |
| 57 |
Troyer_2008 |
FIV cross-species transmission: An evolutionary prospective |
Troyer, Jennifer L.; VandeWoude, Sue; Pecon-Slattery, Jill; McIntosh, Carl; Franklin, Sam; Antunes, Agostinho; Johnson, Warren; O’Brien, Stephen J. |
2008 |
2008-05-15 |
None |
N |
PMC2442884 |
18299153.0 |
10.1016/j.vetimm.2008.01.023 |
mau0ucp3 |
0.333233 |
Sawyer_2012 |
|
| 58 |
Zirkel_2011 |
An Insect Nidovirus Emerging from a Primary Tropical Rainforest |
Zirkel, Florian; Kurth, Andreas; Quan, Phenix-Lan; Briese, Thomas; Ellerbrok, Heinz; Pauli, Georg; Leendertz, Fabian H.; Lipkin, W. Ian; Ziebuhr, John; Drosten, Christian; Junglen, Sandra |
2011 |
2011-06-14 |
NONCOMM |
N |
PMC3111606 |
21673192.0 |
10.1128/mbio.00077-11 |
ulwo6i38 |
0.329046 |
|
Becker_2019, Wu_Z_2018 |
| 59 |
Disotell_2003 |
Discovering human history from stomach bacteria |
Disotell, Todd R |
2003 |
2003-04-28 |
PMC |
N |
PMC156578 |
12734001.0 |
10.1186/gb-2003-4-5-213 |
gi6uaa83 |
0.324106 |
Wang_2018, Delwart_2012, Sawyer_2012 |
Wu_Z_2018 |
| 60 |
Gouilh_2011 |
SARS-Coronavirus ancestor’s foot-prints in South-East Asian bat colonies and the refuge theory |
Gouilh, Meriadeg Ar; Puechmaille, Sébastien J.; Gonzalez, Jean-Paul; Teeling, Emma; Kittayapong, Pattamaporn; Manuguerra, Jean-Claude |
2011 |
2011-10-31 |
PMC |
N |
PMC7106191 |
21763784.0 |
10.1016/j.meegid.2011.06.021 |
walpfa6r |
0.323039 |
Xu_L_2018, Tong_2009, Wang_2018, de_Sales_Lima_2015, Schountz_2013 |
Luk_H_2019, Asano_2016 |
| 61 |
Wille_2019 |
Virome heterogeneity and connectivity in waterfowl and shorebird communities |
Michelle Wille; Mang Shi; Marcel Klaassen; Aeron C. Hurt; Edward C. Holmes |
2019 |
2019-01-29 |
BioRxiv |
N |
|
|
10.1101/528174 |
yzjh6ot3 |
0.322777 |
Wang_2015, Xu_L_2018 |
Wille_2019, Becker_2019 |
| 62 |
Nie_F_2019 |
Discovery of a highly divergent hepadnavirus in shrews from China |
Nie, Fang-Yuan; Tian, Jun-Hua; Lin, Xian-Dan; Yu, Bin; Xing, Jian-Guang; Cao, Jian-Hai; Holmes, Edward C.; Ma, Runlin Z.; Zhang, Yong-Zhen |
2019 |
2019-05-31 |
PMC |
N |
|
30884426.0 |
10.1016/j.virol.2019.03.007 |
fcaptra0 |
0.321350 |
Wang_2018, Xu_L_2018, Geoghegan_2017 |
|
| 63 |
Chong_2013 |
Successful establishment and global dispersal of genotype VI avian paramyxovirus serotype 1 after cross species transmission |
Chong, Yee Ling; Lam, Tommy Tsan-Yuk; Kim, Oekyung; Lu, Huaguang; Dunn, Patty; Poss, Mary |
2013 |
2013-07-31 |
None |
N |
PMC7106292 |
23628639.0 |
10.1016/j.meegid.2013.04.025 |
u8l2nzww |
0.315766 |
Roberton_2006 |
Maganga_2014 |
| 64 |
Plowright_2017 |
Pathways to zoonotic spillover |
Plowright, Raina K.; Parrish, Colin R.; McCallum, Hamish; Hudson, Peter J.; Ko, Albert I.; Graham, Andrea L.; Lloyd-Smith, James O. |
2017 |
2017-05-30 |
None |
N |
PMC5791534 |
28555073.0 |
10.1038/nrmicro.2017.45 |
k9ygdhqg |
0.305902 |
|
Brisson_2011 |
| 65 |
Thézé_2015 |
Evolutionary and Phylogenetic Analysis of the Hepaciviruses and Pegiviruses |
Thézé, Julien; Lowes, Sophia; Parker, Joe; Pybus, Oliver G. |
2015 |
2015-10-21 |
COMM-USE |
N |
PMC5635594 |
26494702.0 |
10.1093/gbe/evv202 |
culz3lom |
0.302184 |
Wang_2018, Wang_2015 |
Barrette_2011 |
| 66 |
Woolhouse_2018 |
Epidemiological characteristics of human-infective RNA viruses |
Woolhouse, Mark E. J.; Brierley, Liam |
2018 |
2018-02-20 |
COMM-USE |
N |
PMC5819479 |
29461515.0 |
10.1038/sdata.2018.17 |
ywm60sdf |
0.300079 |
Wang_2018 |
Brüssow_2012, Rasche_2019 |
| 67 |
Hayward_2018 |
Differential Evolution of Antiretroviral Restriction Factors in Pteropid Bats as Revealed by APOBEC3 Gene Complexity |
Hayward, Joshua A; Tachedjian, Mary; Cui, Jie; Cheng, Adam Z; Johnson, Adam; Baker, Michelle L; Harris, Reuben S; Wang, Lin-Fa; Tachedjian, Gilda |
2018 |
2018-03-29 |
COMM-USE |
N |
PMC5995163 |
29617834.0 |
10.1093/molbev/msy048 |
1i6c0l3e |
0.300053 |
Schountz_2013, Wang_2018 |
Hayward_2020 |