Topic 02 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 30 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Conrardy_2014 Molecular Detection of Adenoviruses, Rhabdoviruses, and Paramyxoviruses in Bats from Kenya Conrardy, Christina; Tao, Ying; Kuzmin, Ivan V.; Niezgoda, Michael; Agwanda, Bernard; Breiman, Robert F.; Anderson, Larry J.; Rupprecht, Charles E.; Tong, Suxiang 2014 2014-08-06 COMM-USE N PMC4125246 24865685.0 10.4269/ajtmh.13-0664 x1h2d4wz 0.952951 Xu_L_2018 Lee_D_2019, Yinda_2016
2 Goffard_2015 Alphacoronaviruses Detected in French Bats Are Phylogeographically Linked to Coronaviruses of European Bats Goffard, Anne; Demanche, Christine; Arthur, Laurent; Pinçon, Claire; Michaux, Johan; Dubuisson, Jean 2015 2015-12-02 COMM-USE N PMC4690861 26633467.0 10.3390/v7122937 ijmh9012 0.930337 Xu_L_2018, Kosoy_2010, Tong_2009, Sonntag_2009 Asano_2016, Wong_2019, Fischer_2016, Bittar_2019
3 Asano_2016 Alphacoronavirus in urban Molossidae and Phyllostomidae bats, Brazil Asano, Karen Miyuki; Hora, Aline Santana; Scheffer, Karin Côrrea; Fahl, Willian Oliveira; Iamamoto, Keila; Mori, Enio; Brandão, Paulo Eduardo 2016 2016-06-24 COMM-USE N PMC4920988 27342195.0 10.1186/s12985-016-0569-4 6fxeqgtu 0.927537 Xu_L_2018, Tong_2009, Wang_2015, Whittaker_2017 Lee_D_2019, Bittar_2019, Becker_2019
4 Markotter_2019 Paramyxo- and Coronaviruses in Rwandan Bats Markotter, Wanda; Geldenhuys, Marike; Jansen van Vuren, Petrus; Kemp, Alan; Mortlock, Marinda; Mudakikwa, Antoine; Nel, Louis; Nziza, Julius; Paweska, Janusz; Weyer, Jacqueline 2019 2019-07-02 COMM-USE N PMC6789848 31269631.0 10.3390/tropicalmed4030099 muxrxvyo 0.904139 Xu_L_2018, Tong_2009, Kosoy_2010, Banyard_2013 Lee_D_2019, Asano_2016, Maganga_2014, Bittar_2019
5 Watanabe_2010 Bat Coronaviruses and Experimental Infection of Bats, the Philippines Watanabe, Shumpei; Masangkay, Joseph S.; Nagata, Noriyo; Morikawa, Shigeru; Mizutani, Tetsuya; Fukushi, Shuetsu; Alviola, Phillip; Omatsu, Tsutomu; Ueda, Naoya; Iha, Koichiro; Taniguchi, Satoshi; Fujii, Hikaru; Tsuda, Shumpei; Endoh, Maiko; Kato, Kentaro; Tohya, Yukinobu; Kyuwa, Shigeru; Yoshikawa, Yasuhiro; Akashi, Hiroomi 2010 2010-08-23 PMC N PMC3298303 20678314.0 10.3201/eid1608.100208 8wwcbsfl 0.853326 Sonntag_2009, Xu_L_2018 Bittar_2019, Lee_D_2019, Asano_2016, Markotter_2019
6 Whittaker_2017 Spike-based phylogenetically defined clades within the Alphacoronavirus 1 species Gary R. Whittaker; Nicole M. André; Jean Kaoru Millet 2017 2017-01-19 BioRxiv N 10.1101/101774 pl7t3hca 0.826210 Xu_L_2018, Wang_2015 Wang_2019, Asano_2016
7 Lee_S_2017 Genetic Characteristics of Coronaviruses from Korean Bats in 2016 Lee, Saemi; Jo, Seong-Deok; Son, Kidong; An, Injung; Jeong, Jipseol; Wang, Seung-Jun; Kim, Yongkwan; Jheong, Weonhwa; Oem, Jae-Ku 2017 2017-07-19 PMC N PMC7079938 28725945.0 10.1007/s00248-017-1033-8 axon4jdc 0.778522 Xu_L_2018, Tong_2009 Lee_D_2019, Wang_2017, Bittar_2019, Doysabas_2019
8 Lee_S_2018 Genetic diversity and phylogenetic analysis of newly discovered bat astroviruses in Korea Lee, Sook-Young; Son, Ki-Dong; Yong-Sik, Kim; Wang, Seung-Jun; Kim, Yong-Kwan; Jheong, Weon-Hwa; Oem, Jae-Ku 2018 2018-08-10 PMC N PMC7087088 30097745.0 10.1007/s00705-018-3992-6 9q4lr0t4 0.771048 Xu_L_2018, Tong_2009, Kosoy_2010 Lee_D_2019, Fischer_2016, Lacroix_2017, Wang_2017
9 Dominguez_2007 Detection of Group 1 Coronaviruses in Bats in North America Dominguez, Samuel R.; O’Shea, Thomas J.; Oko, Lauren M.; Holmes, Kathryn V. 2007 2007-09-23 PMC N PMC2857301 18252098.0 10.3201/eid1309.070491 sprvon1t 0.758184 Xu_L_2018, Sonntag_2009, Tong_2009 Wacharapluesadee_2015, Bittar_2019, Lecis_2018
10 Lazov_2018 Detection and Characterization of Distinct Alphacoronaviruses in Five Different Bat Species in Denmark Lazov, Christina M.; Chriél, Mariann; Baagøe, Hans J.; Fjederholt, Esben; Deng, Yu; Kooi, Engbert A.; Belsham, Graham J.; Bøtner, Anette; Rasmussen, Thomas Bruun 2018 2018-09-11 COMM-USE N PMC6163574 30208582.0 10.3390/v10090486 b1e9jcdk 0.749018 Xu_L_2018, Tong_2009 Lee_D_2019, Asano_2016
11 Whittaker_2018 Improving Virus Taxonomy by Recontextualizing Sequence-Based Classification with Biologically Relevant Data: the Case of the Alphacoronavirus 1 Species Whittaker, Gary R.; André, Nicole M.; Millet, Jean Kaoru 2018 2018-01-03 COMM-USE N PMC5750389 29299531.0 10.1128/mspheredirect.00463-17 copdn2y0 0.746896 Whittaker_2017, Wang_2015
12 Moreira‐Soto_2015 Neotropical Bats from Costa Rica harbour Diverse Coronaviruses Moreira‐Soto, A.; Taylor‐Castillo, L.; Vargas‐Vargas, N.; Rodríguez‐Herrera, B.; Jiménez, C.; Corrales‐Aguilar, E. 2015 2015-02-04 PMC N PMC7165833 25653111.0 10.1111/zph.12181 52u2sct7 0.739579 Xu_L_2018, Kosoy_2010, Sonntag_2009, Tong_2009
13 Lee_D_2019 Two novel adenoviruses found in Cave Myotis bats (Myotis velifer) in Oklahoma Lee, Dana N.; Angiel, Meagan 2019 2019-12-03 PMC N PMC7089485 31797220.0 10.1007/s11262-019-01719-2 umvk59dc 0.739267 Xu_L_2018, Sonntag_2009, Tong_2009 Doysabas_2019, Yinda_2016
14 Zhu_C_2020 Distribution and genetic diversity of adeno-associated viruses in bats from coastal areas of Southeast China Zhu, Changqiang; Wang, Chunhui; Wu, Jiahong; Ye, Fuqiang; Lv, Ruichen; Hu, Dan; Ai, Lele; Yang, Lu; Wu, Ting; Li, Bo; Ding, Chenxi; Zhang, Bin; Lv, Heng; Wang, Changjun; Tan, Weilong 2020 2020-02-28 COMM-USE N PMC7048818 32111911.0 10.1038/s41598-020-60721-z 9oilxgdh 0.738484 Xu_L_2018, Tong_2009, Sonntag_2009 Lee_D_2019, Doysabas_2019
15 Kobayashi_2018 Detection of bat hepatitis E virus RNA in microbats in Japan Kobayashi, Tomoya; Murakami, Shin; Yamamoto, Terumasa; Mineshita, Ko; Sakuyama, Muneki; Sasaki, Reiko; Maeda, Ken; Horimoto, Taisuke 2018 2018-05-29 PMC N PMC7088820 29845506.0 10.1007/s11262-018-1577-9 co9j3uig 0.731421 Xu_L_2018, Tong_2009 Doysabas_2019
16 Ar_Gouilh_2018 SARS-CoV related Betacoronavirus and diverse Alphacoronavirus members found in western old-world Ar Gouilh, Meriadeg; Puechmaille, Sébastien J.; Diancourt, Laure; Vandenbogaert, Mathias; Serra-Cobo, Jordi; Lopez Roïg, Marc; Brown, Paul; Moutou, François; Caro, Valérie; Vabret, Astrid; Manuguerra, Jean-Claude 2018 2018-04-30 None N PMC7112086 29482919.0 10.1016/j.virol.2018.01.014 wiwo8jss 0.731247 Xu_L_2018, Tong_2009, de_Sales_Lima_2015, Banyard_2013 Asano_2016, Wong_2019
17 Iglesias-Caballero_2018 New Adenovirus Groups in Western Palaearctic Bats Iglesias-Caballero, Maria; Juste, Javier; Vázquez-Morón, Sonia; Falcon, Ana; Aznar-Lopez, Carolina; Ibáñez, Carlos; Pozo, Francisco; Ruiz, Guillermo; Berciano, Jose M.; Garin, Inazio; Aihartza, Joxerra; Echevarría, Juan E.; Casas, Inmaculada 2018 2018-08-20 COMM-USE N PMC6116233 30127258.0 10.3390/v10080443 eb4fodom 0.715153 Xu_L_2018, Tong_2009, Wang_2015 Lee_D_2019
18 Lin_X_2017 Extensive diversity of coronaviruses in bats from China Lin, Xian-Dan; Wang, Wen; Hao, Zong-Yu; Wang, Zhao-Xiao; Guo, Wen-Ping; Guan, Xiao-Qing; Wang, Miao-Ruo; Wang, Hong-Wei; Zhou, Run-Hong; Li, Ming-Hui; Tang, Guang-Peng; Wu, Jun; Holmes, Edward C.; Zhang, Yong-Zhen 2017 2017-07-31 None N PMC7111643 28384506.0 10.1016/j.virol.2017.03.019 xutbbxpr 0.713677 Xu_L_2018, Tong_2009, de_Sales_Lima_2015 Asano_2016, Lau_S_2019, Wong_2019, Ar_Gouilh_2018
19 Fischer_2016 Insectivorous bats carry host specific astroviruses and coronaviruses across different regions in Germany Fischer, Kerstin; Zeus, Veronika; Kwasnitschka, Linda; Kerth, Gerald; Haase, Martin; Groschup, Martin H.; Balkema-Buschmann, Anne 2016 2016-01-31 PMC N PMC7106178 26584511.0 10.1016/j.meegid.2015.11.010 n317j8j3 0.698859 Xu_L_2018, Tong_2009, de_Sales_Lima_2015 Lee_D_2019, Bittar_2019, Fischer_2017, Canuti_2011
20 Finoketti_2019 Detection of adenovirus, papillomavirus and parvovirus in Brazilian bats of the species Artibeus lituratus and Sturnira lilium Finoketti, Fernando; dos Santos, Raíssa Nunes; Campos, Aline Alves Scarpellini; Zani, André Luís da Silva; Barboza, Camila Mosca; Fernandes, Marcélia Emanuele Sad; de Souza, Tatiane de Cassia Pardo; dos Santos, Driele Delanira; Bortolanza, Giovana Werneck; Filho, Henrique Ortêncio; Roehe, Paulo Michel; Franco, Ana Cláudia; de Carvalho Ruthner Batista, Helena Beatriz 2019 2019-02-10 PMC N PMC7086806 30740637.0 10.1007/s00705-018-04129-1 1uijeo9o 0.695980 Xu_L_2018, Tong_2009, Kosoy_2010, de_Sales_Lima_2015 Lee_D_2019, Wray_2016
21 Lacroix_2017 Diversity of bat astroviruses in Lao PDR and Cambodia Lacroix, Audrey; Duong, Veasna; Hul, Vibol; San, Sorn; Davun, Holl; Omaliss, Keo; Chea, Sokha; Hassanin, Alexandre; Theppangna, Watthana; Silithammavong, Soubanh; Khammavong, Kongsy; Singhalath, Sinpakone; Afelt, Aneta; Greatorex, Zoe; Fine, Amanda E.; Goldstein, Tracey; Olson, Sarah; Joly, Damien O.; Keatts, Lucy; Dussart, Philippe; Frutos, Roger; Buchy, Philippe 2017 2017-01-31 PMC N PMC7106329 27871796.0 10.1016/j.meegid.2016.11.013 3zrqhlfa 0.686413 Tong_2009, Xu_L_2018, Kosoy_2010, Banyard_2013 Fischer_2017, Lee_D_2019, Mendenhall_2017, Hoarau_2018
22 Xu_L_2016 Detection and characterization of diverse alpha- and betacoronaviruses from bats in China Xu, Lin; Zhang, Fuqiang; Yang, Weihong; Jiang, Tinglei; Lu, Guanjun; He, Biao; Li, Xingyu; Hu, Tingsong; Chen, Gang; Feng, Yun; Zhang, Yuzhen; Fan, Quanshui; Feng, Jiang; Zhang, Hailin; Tu, Changchun 2016 2016-02-02 PMC N PMC7090707 26847648.0 10.1007/s12250-016-3727-3 1c38o79q 0.684277 Xu_L_2018, Wang_2015, Tong_2009 Wang_2019, Asano_2016, Tao_Y_2012
23 Tsoleridis_2016 Discovery of Novel Alphacoronaviruses in European Rodents and Shrews Tsoleridis, Theocharis; Onianwa, Okechukwu; Horncastle, Emma; Dayman, Emma; Zhu, Miaoran; Danjittrong, Taechasit; Wachtl, Marta; Behnke, Jerzy M.; Chapman, Sarah; Strong, Victoria; Dobbs, Phillipa; Ball, Jonathan K.; Tarlinton, Rachael E.; McClure, C. Patrick 2016 2016-03-18 COMM-USE N PMC4810274 27102167.0 10.3390/v8030084 0xixcopg 0.681862 Xu_L_2018, Kosoy_2010, Tong_2009 Tsoleridis_2019, Wu_Z_2018
24 Smith_2016 Coronavirus Infection and Diversity in Bats in the Australasian Region Smith, C. S.; de Jong, C. E.; Meers, J.; Henning, J.; Wang, L- F.; Field, H. E. 2016 2016-04-05 PMC N PMC7087777 27048154.0 10.1007/s10393-016-1116-x cq0jkb1d 0.681042 Xu_L_2018, Tong_2009 Lau_S_2019, Markotter_2019, Wong_2019, Lecis_2018
25 Kosoy_2010 Bartonella spp. in Bats, Kenya Kosoy, Michael; Bai, Ying; Lynch, Tarah; Kuzmin, Ivan V.; Niezgoda, Michael; Franka, Richard; Agwanda, Bernard; Breiman, Robert F.; Rupprecht, Charles E. 2010 2010-12-23 PMC N PMC3294596 21122216.0 10.3201/eid1612.100601 cpevwjrh 0.680855 Xu_L_2018, Sonntag_2009, Ceballos_2013 Lin_J_2012, Ramírez_2014, Wray_2016, Lee_D_2019
26 Xu_L_2018 Molecular detection and sequence characterization of diverse rhabdoviruses in bats, China Xu, Lin; Wu, Jianmin; Jiang, Tinglei; Qin, Shaomin; Xia, Lele; Li, Xingyu; He, Biao; Tu, Changchun 2018 2018-01-15 PMC N PMC7114522 29196194.0 10.1016/j.virusres.2017.11.028 fcrd7lrw 0.678474 Tong_2009, Sonntag_2009 Lee_D_2019
27 Berto_2017 Detection of potentially novel paramyxovirus and coronavirus viral RNA in bats and rats in the Mekong Delta region of southern Viet Nam Berto, A.; Anh, P. H.; Carrique‐Mas, J. J.; Simmonds, P.; Van Cuong, N.; Tue, N. T.; Van Dung, N.; Woolhouse, M. E.; Smith, I.; Marsh, G. A.; Bryant, J. E.; Thwaites, G. E.; Baker, S.; Rabaa, M. A.; Kiet, Bach Tuan; Boni, Maciej F.; Phu, Bui Duc; Campbell, James I; Hung, Dang Manh; Huong, Dang Thao; Oanh, Dang Tram; Day, Jeremy N.; Van Tan, Dinh; van Doorn, H. Rogier; Han, Duong An; Farrar, Jeremy J; Trang, Hau Thi Thu; Nghia, Ho Dang Trung; Long, Hoang Bao; Van Duong, Hoang; Thu, Huynh Thi Kim; Cuong, Lam Chi; Hung, Manh; Phuong, Thanh; Phuc, Thi; Phuong, Thi; Luat, Xuan; Ha, Luu Thi Thu; Van Chuong, Ly; Loan, Mai Thi Phuoc; Nadjm, Behzad; Bao, Ngo Thanh; Tu, Nguyen Canh; Thuan, Nguyen Dac; Dong, Nguyen; Chuyen, Nguyen Khac; An, Nguyen Ngoc; Vinh, Nguyen Ngoc; Hung, Nguyen Quoc; Dung, Nguyen Thanh; Minh, Nguyen Thanh; Binh, Nguyen Thi; Tham, Nguyen Thi Hong; Tien, Nguyen Thi Hong; Chuc, Nguyen Thi Kim; Le Ngoc, Nguyen Thi; Ha, Nguyen Thi Lien; Lien, Nguyen Thi Nam; Diep, Nguyen Thi Ngoc; Nhung, Nguyen Thi; Chau, Nguyen Thi Song; Chi, Nguyen Thi Yen; Trinh, Nguyen Thieu; Van, Nguyen Thu; Van Hung, Nguyen; Van Kinh, Nguyen; Van Minh Hoang, Nguyen; Van My, Nguyen; Van Thang, Nguyen; Van Thanh, Nguyen; Van Vinh Chau, Nguyen; Van Xang, Nguyen; My, Pham Ha; Khoa, Pham Thi Minh; Tam, Pham Thi Thanh; Van Lao, Pham; Van Minh, Pham; Van Be Bay, Phan; Rahman, Motiur; Thompson, Corinne; Ngan, Ta Thi Dieu; Nhu, Tran Do Hoang; Chau, Tran Hoang Minh; Toan, Tran Khanh; Phuc, Tran My; Hong, Tran Thi Kim; Dung, Tran Thi Ngoc; Thanh, Tran Thi Thanh; Minh, Tran Thi Thuy; Nguyen, Tran Thua; Hien, Tran Tinh; Tri, Trinh Quang; Hien, Vo Be; Tai, Vo Nhut; Cuong, Vo Quoc; Phat, Voong Vinh; Huong, Vu Thi Lan; Hang, Vu Thi Ty; Wertheim, Heiman; Bogaardt, Carlijn; Brierley, Liam; Chase‐Topping, Margo; Ivens, Al; Lu, Lu; Rambaut, Andrew; Woolhouse, Mark; Cotten, Matthew; Oude Munnink, Bas B.; Kellam, Paul; Phan, My Vu Tra; van der Hoek, Lia; Deijs, Martin; Jebbink, Maarten F.; Farsani, Seyed Mohammad Jazaeri; Saylors, Karen; Wolfe, Nathan 2017 2017-04-18 COMM-USE N PMC5811810 28418192.0 10.1111/zph.12362 tcim3wrz 0.664430 Tong_2009, Sonntag_2009, Xu_L_2018 Lee_D_2019, Doysabas_2019, Bittar_2019
28 Rihtarič_2010 Identification of SARS-like coronaviruses in horseshoe bats (Rhinolophus hipposideros) in Slovenia Rihtarič, Danijela; Hostnik, Peter; Steyer, Andrej; Grom, Jože; Toplak, Ivan 2010 2010-03-10 PMC N PMC7087122 20217155.0 10.1007/s00705-010-0612-5 5av4lncr 0.659654 Xu_L_2018, Wang_2015 Lee_D_2019
29 MULEYA_2013 Molecular Epidemiology of Paramyxoviruses in Frugivorous Eidolon helvum Bats in Zambia MULEYA, Walter; SASAKI, Michihito; ORBA, Yasuko; ISHII, Akihiro; THOMAS, Yuka; NAKAGAWA, Emiko; OGAWA, Hirohito; HANG’OMBE, Bernard; NAMANGALA, Boniface; MWEENE, Aaron; TAKADA, Ayato; KIMURA, Takashi; SAWA, Hirofumi 2013 2013-12-31 NONCOMM N PMC4064153 24389743.0 10.1292/jvms.13-0518 cy61pjcb 0.655605 Xu_L_2018, Sonntag_2009, Tong_2009 Lee_D_2019, Maganga_2014, Markotter_2019
30 Mendenhall_2016 Identification of a Lineage D Betacoronavirus in Cave Nectar Bats (Eonycteris spelaea) in Singapore and an Overview of Lineage D Reservoir Ecology in SE Asian Bats Mendenhall, I. H.; Borthwick, S.; Neves, E. S.; Low, D.; Linster, M.; Liang, B.; Skiles, M.; Jayakumar, J.; Han, H.; Gunalan, V.; Lee, B. P. Y.‐H.; Okahara, K.; Wang, L.‐F.; Maurer‐Stroh, S.; Su, Y. C. F.; Smith, G. J. D. 2016 2016-09-16 PMC N PMC7159162 27637887.0 10.1111/tbed.12568 fly59wgi 0.653006 Tong_2009, Xu_L_2018, Wang_2015
31 Anindita_2015 Detection of coronavirus genomes in Moluccan naked-backed fruit bats in Indonesia Anindita, Paulina Duhita; Sasaki, Michihito; Setiyono, Agus; Handharyani, Ekowati; Orba, Yasuko; Kobayashi, Shintaro; Rahmadani, Ibnu; Taha, Siswatiana; Adiani, Sri; Subangkit, Mawar; Nakamura, Ichiro; Sawa, Hirofumi; Kimura, Takashi 2015 2015-02-04 PMC N PMC7086880 25643817.0 10.1007/s00705-015-2342-1 fqxjzavm 0.650382 Wang_2015, Xu_L_2018, Tong_2009 Lee_D_2019
32 Poon_2005 Identification of a Novel Coronavirus in Bats Poon, L. L. M.; Chu, D. K. W.; Chan, K. H.; Wong, O. K.; Ellis, T. M.; Leung, Y. H. C.; Lau, S. K. P.; Woo, P. C. Y.; Suen, K. Y.; Yuen, K. Y.; Guan, Y.; Peiris, J. S. M. 2005 2005-01-28 PMC N PMC546586 15681402.0 10.1128/jvi.79.4.2001-2009.2005 b6abkv7p 0.650291 Chua_2011
33 Tao_Y_2012 Genomic characterization of seven distinct bat coronaviruses in Kenya Tao, Ying; Tang, Kevin; Shi, Mang; Conrardy, Christina; Li, Kenneth S.M.; Lau, Susanna K.P.; Anderson, Larry J.; Tong, Suxiang 2012 2012-07-31 PMC N PMC7114443 22561208.0 10.1016/j.virusres.2012.04.007 bkm486jd 0.647996 Xu_L_2018, Wang_2015, Tong_2009 Wang_2019
34 Woo_P_2006 Molecular diversity of coronaviruses in bats Woo, Patrick C.Y.; Lau, Susanna K.P.; Li, Kenneth S.M.; Poon, Rosana W.S.; Wong, Beatrice H.L.; Tsoi, Hoi-wah; Yip, Bethanie C.K.; Huang, Yi; Chan, Kwok-hung; Yuen, Kwok-yung 2006 2006-07-20 PMC Y PMC7111821 16647731.0 10.1016/j.virol.2006.02.041 ssa59gng 0.646823 Xu_L_2018, Sonntag_2009, Tong_2009, Kosoy_2010 Lau_S_2019, Wang_2017, Lecis_2018
35 Wacharapluesadee_2015 Diversity of coronavirus in bats from Eastern Thailand Wacharapluesadee, Supaporn; Duengkae, Prateep; Rodpan, Apaporn; Kaewpom, Thongchai; Maneeorn, Patarapol; Kanchanasaka, Budsabong; Yingsakmongkon, Sangchai; Sittidetboripat, Nuntaporn; Chareesaen, Chaiyaporn; Khlangsap, Nathawat; Pidthong, Apisit; Leadprathom, Kumron; Ghai, Siriporn; Epstein, Jonathan H; Daszak, Peter; Olival, Kevin J; Blair, Patrick J; Callahan, Michael V; Hemachudha, Thiravat 2015 2015-04-11 COMM-USE N PMC4416284 25884446.0 10.1186/s12985-015-0289-1 yneiaypf 0.646609 Xu_L_2018, Tong_2009, Sonntag_2009, Kosoy_2010 Wang_2017, Lee_D_2019, Amer_2018, Doysabas_2019
36 De_Sabato_2019 Full genome characterization of two novel Alpha-coronavirus species from Italian bats De Sabato, Luca; Lelli, Davide; Faccin, Francesca; Canziani, Sabrina; Di Bartolo, Ilaria; Vaccari, Gabriele; Moreno, Ana 2019 2019-01-15 PMC N PMC7114869 30447246.0 10.1016/j.virusres.2018.11.007 797r1kpy 0.645226 Xu_L_2018, Tong_2009, Wang_2015 Amer_2018, Wang_2019
37 Falcón_2011 Detection of alpha and betacoronaviruses in multiple Iberian bat species Falcón, Ana; Vázquez-Morón, Sonia; Casas, Inmaculada; Aznar, Carolina; Ruiz, Guillermo; Pozo, Francisco; Perez-Breña, Pilar; Juste, Javier; Ibáñez, Carlos; Garin, Inazio; Aihartza, Joxerra; Echevarría, Juan E. 2011 2011-07-16 NONCOMM N PMC3181409 21766197.0 10.1007/s00705-011-1057-1 5bad8qn7 0.641713 Xu_L_2018, Tong_2009 Asano_2016, Goffard_2015, Lecis_2018
38 Maganga_2014 Identification of an Unclassified Paramyxovirus in Coleura afra: A Potential Case of Host Specificity Maganga, Gael D.; Bourgarel, Mathieu; Obame Nkoghe, Judicael; N'Dilimabaka, Nadine; Drosten, Christian; Paupy, Christophe; Morand, Serge; Drexler, Jan Felix; Leroy, Eric M. 2014 2014-12-31 COMM-USE N PMC4281239 25551455.0 10.1371/journal.pone.0115588 4su5on6s 0.625975 Xu_L_2018, Tong_2009, Kosoy_2010, Sonntag_2009 Lee_D_2019
39 Holz_2018 Virus survey in populations of two subspecies of bent-winged bats (Miniopterus orianae bassanii and oceanensis) in south-eastern Australia reveals a high prevalence of diverse herpesviruses Holz, Peter H.; Lumsden, Linda F.; Druce, Julian; Legione, Alistair R.; Vaz, Paola; Devlin, Joanne M.; Hufschmid, Jasmin 2018 2018-05-24 COMM-USE N PMC5967723 29795610.0 10.1371/journal.pone.0197625 y84ckwee 0.623302 Xu_L_2018, Tong_2009, Banyard_2013, Sonntag_2009 Lee_D_2019, Mendenhall_2019, Wong_2019, Ramírez_2014
40 Du_J_2016 Genetic diversity of coronaviruses in Miniopterus fuliginosus bats Du, Jiang; Yang, Li; Ren, Xianwen; Zhang, Junpeng; Dong, Jie; Sun, Lilian; Zhu, Yafang; Yang, Fan; Zhang, Shuyi; Wu, Zhiqiang; Jin, Qi 2016 2016-04-28 COMM-USE N PMC7089092 27125516.0 10.1007/s11427-016-5039-0 u3cz9pv9 0.621354 Xu_L_2018, Tong_2009, Wang_2015, Straková_2017 Asano_2016, Wang_2017, Wang_2019
41 Lecis_2018 Molecular identification of Betacoronavirus in bats from Sardinia (Italy): first detection and phylogeny Lecis, Roberta; Mucedda, Mauro; Pidinchedda, Ermanno; Pittau, Marco; Alberti, Alberto 2018 2018-11-13 PMC N PMC7089328 30426315.0 10.1007/s11262-018-1614-8 gz5pzkky 0.620621 Xu_L_2018, Sonntag_2009 Wang_2017, Asano_2016, Bittar_2019, Lee_D_2019
42 Tsuda_2012 Genomic and serological detection of bat coronavirus from bats in the Philippines Tsuda, Shumpei; Watanabe, Shumpei; Masangkay, Joseph S.; Mizutani, Tetsuya; Alviola, Phillip; Ueda, Naoya; Iha, Koichiro; Taniguchi, Satoshi; Fujii, Hikaru; Kato, Kentaro; Horimoto, Taisuke; Kyuwa, Shigeru; Yoshikawa, Yasuhiro; Akashi, Hiroomi 2012 2012-07-26 PMC N PMC7086765 22833101.0 10.1007/s00705-012-1410-z s8ajikp0 0.617524 Xu_L_2018 Bittar_2019, Lecis_2018, Lee_D_2019
43 Chen_2016 Detection of the Severe Acute Respiratory Syndrome‐Related Coronavirus and Alphacoronavirus in the Bat Population of Taiwan Chen, Y.‐N.; Phuong, V. N.; Chen, H. C.; Chou, C.‐H.; Cheng, H.‐C.; Wu, C.‐H. 2016 2016-05-13 PMC N PMC7165716 27178103.0 10.1111/zph.12271 s17d06kr 0.614122 Sonntag_2009, Kosoy_2010, Xu_L_2018, Tong_2009
44 Lacroix_2017 Genetic diversity of coronaviruses in bats in Lao PDR and Cambodia Lacroix, Audrey; Duong, Veasna; Hul, Vibol; San, Sorn; Davun, Hull; Omaliss, Keo; Chea, Sokha; Hassanin, Alexandre; Theppangna, Watthana; Silithammavong, Soubanh; Khammavong, Kongsy; Singhalath, Sinpakone; Greatorex, Zoe; Fine, Amanda E.; Goldstein, Tracey; Olson, Sarah; Joly, Damien O.; Keatts, Lucy; Dussart, Philippe; Afelt, Aneta; Frutos, Roger; Buchy, Philippe 2017 2017-03-31 PMC N PMC7106194 27932284.0 10.1016/j.meegid.2016.11.029 e117g64b 0.611084 Tong_2009, Xu_L_2018, Sonntag_2009 Doysabas_2019, Lee_D_2019, Chua_2011
45 Yang_2018 Genetic diversity of bat orthohepadnaviruses in China and a proposed new nomenclature Yang, Ling'en; Wu, Jianmin; Hu, Tingsong; Qin, Shaomin; Deng, Bo; Liu, Jinfeng; Zhang, Fuqiang; He, Biao; Tu, Changchun 2018 2018-09-30 PMC N 29842981.0 10.1016/j.meegid.2018.05.024 efp5s20s 0.611056 Xu_L_2018, Tong_2009
46 Osborne_2011 Alphacoronaviruses in New World Bats: Prevalence, Persistence, Phylogeny, and Potential for Interaction with Humans Osborne, Christina; Cryan, Paul M.; O'Shea, Thomas J.; Oko, Lauren M.; Ndaluka, Christina; Calisher, Charles H.; Berglund, Andrew D.; Klavetter, Mead L.; Bowen, Richard A.; Holmes, Kathryn V.; Dominguez, Samuel R. 2011 2011-05-12 COMM-USE N PMC3093381 21589915.0 10.1371/journal.pone.0019156 r8jki3x4 0.608024 Xu_L_2018, Kosoy_2010, Sonntag_2009, Tong_2009 Asano_2016, Goffard_2015, Lee_D_2019, Bittar_2019
47 Carrington_2008 Detection and Phylogenetic Analysis of Group 1 Coronaviruses in South American Bats Carrington, Christine V.F.; Foster, Jerome E.; Zhu, Hua Chen; Zhang, Jin Xia; Smith, Gavin J.D.; Thompson, Nadin; Auguste, Albert J.; Ramkissoon, Vernie; Adesiyun, Abiodun A.; Guan, Yi 2008 2008-12-23 PMC N PMC2634629 19046513.0 10.3201/eid1412.080642 u0fs6xcj 0.605993 Wang_2015 Müller_2007, Góes_2016, Wang_2018
48 He_B_2013 Virome Profiling of Bats from Myanmar by Metagenomic Analysis of Tissue Samples Reveals More Novel Mammalian Viruses He, Biao; Li, Zuosheng; Yang, Fanli; Zheng, Junfeng; Feng, Ye; Guo, Huancheng; Li, Yingying; Wang, Yiyin; Su, Nan; Zhang, Fuqiang; Fan, Quanshui; Tu, Changchun 2013 2013-04-22 COMM-USE N PMC3632529 23630620.0 10.1371/journal.pone.0061950 04d0koah 0.605620 Xu_L_2018, Wang_2015, Tong_2009 Lee_D_2019, Doysabas_2019, Wu_Z_2018
49 Mendenhall_2019 Discovery and Characterization of Novel Bat Coronavirus Lineages from Kazakhstan Mendenhall, Ian H.; Kerimbayev, Aslan A.; Strochkov, Vitaliy M.; Sultankulova, Kulyaisan T.; Kopeyev, Syrym K.; Su, Yvonne C.F.; Smith, Gavin J.D.; Orynbayev, Mukhit B. 2019 2019-04-17 COMM-USE N PMC6521082 30999711.0 10.3390/v11040356 yo5ojr0s 0.601564 Tong_2009, Xu_L_2018 Wang_2017, Wong_2019
50 Maeda_2008 Isolation of Novel Adenovirus from Fruit Bat (Pteropus dasymallus yayeyamae) Maeda, Ken; Hondo, Eiichi; Terakawa, Junpei; Kiso, Yasuo; Nakaichi, Numekazu; Endoh, Daiji; Sakai, Kouji; Morikawa, Shigeru; Mizutani, Tetsuya 2008 2008-02-23 PMC N PMC2630045 18258142.0 10.3201/eid1402.070932 z8zkl2xh 0.600177
51 Tsoleridis_2019 Shared Common Ancestry of Rodent Alphacoronaviruses Sampled Globally Tsoleridis, Theocharis; Chappell, Joseph G.; Onianwa, Okechukwu; Marston, Denise A.; Fooks, Anthony R.; Monchatre-Leroy, Elodie; Umhang, Gérald; Müller, Marcel A.; Drexler, Jan F.; Drosten, Christian; Tarlinton, Rachael E.; McClure, Charles P.; Holmes, Edward C.; Ball, Jonathan K. 2019 2019-01-30 COMM-USE N PMC6409636 30704076.0 10.3390/v11020125 yat2exq9 0.596920 Xu_L_2018, Tong_2009 Asano_2016, Wang_2019, Tao_Y_2012, De_Sabato_2019
52 Nie_F_2018 Extensive diversity and evolution of hepadnaviruses in bats in China Nie, Fang-Yuan; Lin, Xian-Dan; Hao, Zong-Yu; Chen, Xiao-Nan; Wang, Zhao-Xiao; Wang, Miao-Ruo; Wu, Jun; Wang, Hong-Wei; Zhao, Guoqiang; Ma, Runlin Z.; Holmes, Edward C.; Zhang, Yong-Zhen 2018 2018-01-15 PMC N 29153861.0 10.1016/j.virol.2017.11.005 754gr097 0.591457 Xu_L_2018, Tong_2009
53 Lelli_2019 Hypsugopoxvirus: A Novel Poxvirus Isolated from Hypsugo savii in Italy Lelli, Davide; Lavazza, Antonio; Prosperi, Alice; Sozzi, Enrica; Faccin, Francesca; Baioni, Laura; Trogu, Tiziana; Cavallari, Gian Luca; Mauri, Matteo; Gibellini, Anna Maria; Chiapponi, Chiara; Moreno, Ana 2019 2019-06-19 COMM-USE N PMC6631891 31248065.0 10.3390/v11060568 1axsebya 0.591353 Xu_L_2018, Tong_2009, Wang_2015, de_Sales_Lima_2015 Asano_2016
54 Smits_2012 Calicivirus from Novel Recovirus Genogroup in Human Diarrhea, Bangladesh Smits, Saskia L.; Rahman, Mustafizur; Schapendonk, Claudia M.E.; van Leeuwen, Marije; Faruque, Abu S.G.; Haagmans, Bart L.; Endtz, Hubert P.; Osterhaus, Albert D.M.E. 2012 2012-07-23 PMC N PMC3376821 22709854.0 10.3201/eid1807.120344 4k8j7gi7 0.588445
55 Yuan_2014 Evidence for Retrovirus and Paramyxovirus Infection of Multiple Bat Species in China Yuan, Lihong; Li, Min; Li, Linmiao; Monagin, Corina; Chmura, Aleksei A.; Schneider, Bradley S.; Epstein, Jonathan H.; Mei, Xiaolin; Shi, Zhengli; Daszak, Peter; Chen, Jinping 2014 2014-05-16 None N PMC4036550 24841387.0 10.3390/v6052138 d87r58wu 0.575089 Xu_L_2018, Wang_2015, Tong_2009 Doysabas_2019
56 Tong_2009 Detection of Novel SARS-like and Other Coronaviruses in Bats from Kenya Tong, Suxiang; Conrardy, Christina; Ruone, Susan; Kuzmin, Ivan V.; Guo, Xiling; Tao, Ying; Niezgoda, Michael; Haynes, Lia; Agwanda, Bernard; Breiman, Robert F.; Anderson, Larry J.; Rupprecht, Charles E. 2009 2009-03-23 PMC N PMC2681120 19239771.0 10.3201/eid1503.081013 5g2hnk1x 0.567281 Xu_L_2018, Wang_2015 Carrington_2008, Müller_2007, Yu_P_2019, Góes_2016
57 Lu_G_2019 Identification and genome characterization of a novel feline picornavirus proposed in the Hunnivirus genus Lu, Gang; Huang, Mian; Chen, Xuanjiao; Sun, Yankuo; Huang, Ji; Hu, Renjun; Li, Shoujun 2019 2019-07-31 PMC N PMC7106175 30898643.0 10.1016/j.meegid.2019.03.011 dvj0i502 0.566977 Tong_2009, Wang_2015
58 Amoroso_2018 Detection and phylogenetic characterization of astroviruses in insectivorous bats from Central‐Southern Italy Amoroso, Maria Grazia; Russo, Danilo; Lanave, Gianvito; Cistrone, Luca; Pratelli, Annamaria; Martella, Vito; Galiero, Giorgio; Decaro, Nicola; Fusco, Giovanna 2018 2018-06-12 PMC N PMC7165808 29896884.0 10.1111/zph.12484 cmx3q2sc 0.565429 Tong_2009, Xu_L_2018, Roberton_2006, Schountz_2013
59 Wang_2017 Detection and genome characterization of four novel bat hepadnaviruses and a hepevirus in China Wang, Bo; Yang, Xing-Lou; Li, Wen; Zhu, Yan; Ge, Xing-Yi; Zhang, Li-Biao; Zhang, Yun-Zhi; Bock, Claus-Thomas; Shi, Zheng-Li 2017 2017-02-22 COMM-USE N PMC5320732 28222808.0 10.1186/s12985-017-0706-8 cnemxir4 0.562294 Xu_L_2018, Kosoy_2010, Sonntag_2009
60 Rizzo_2017 Coronavirus and paramyxovirus in bats from Northwest Italy Rizzo, Francesca; Edenborough, Kathryn M.; Toffoli, Roberto; Culasso, Paola; Zoppi, Simona; Dondo, Alessandro; Robetto, Serena; Rosati, Sergio; Lander, Angelika; Kurth, Andreas; Orusa, Riccardo; Bertolotti, Luigi; Mandola, Maria Lucia 2017 2017-12-22 COMM-USE N PMC5741894 29273042.0 10.1186/s12917-017-1307-x llxqcikz 0.561742 Xu_L_2018, Tong_2009, Wang_2015, de_Sales_Lima_2015, Banyard_2013 Asano_2016, Lee_D_2019, Bittar_2019, Maganga_2014
61 Zheng_2015 High prevalence and diversity of viruses of the subfamily Gammaherpesvirinae, family Herpesviridae, in fecal specimens from bats of different species in southern China Zheng, Xue-yan; Qiu, Min; Chen, Shao-wei; Xiao, Jian-peng; Ma, Li-zhen; Liu, Shan; Zhou, Jun-hua; Zhang, Qiong-hua; Li, Xing; Chen, Zhong; Wu, Yi; Chen, Hui-fang; Jiang, Li-na; Xiong, Yi-quan; Ma, Shu-juan; Zhong, Xue-shan; Huo, Shu-ting; Ge, Jing; Cen, Shu-wen; Chen, Qing 2015 2015-10-07 PMC N PMC7086982 26446885.0 10.1007/s00705-015-2614-9 4wkk0dk1 0.558409 Xu_L_2018, Tong_2009 Lee_D_2019
62 Wille_2016 High Prevalence and Putative Lineage Maintenance of Avian Coronaviruses in Scandinavian Waterfowl Wille, Michelle; Muradrasoli, Shaman; Nilsson, Anna; Järhult, Josef D. 2016 2016-03-03 COMM-USE N PMC4777420 26938459.0 10.1371/journal.pone.0150198 dz84icdc 0.557313 Xu_L_2018, Takekawa_2010, Roberton_2006, de_Sales_Lima_2015 Amer_2018, Lee_D_2019, Asano_2016
63 Sasaki_2016 Divergent bufavirus harboured in megabats represents a new lineage of parvoviruses Sasaki, Michihito; Gonzalez, Gabriel; Wada, Yuji; Setiyono, Agus; Handharyani, Ekowati; Rahmadani, Ibenu; Taha, Siswatiana; Adiani, Sri; Latief, Munira; Kholilullah, Zainal Abidin; Subangkit, Mawar; Kobayashi, Shintaro; Nakamura, Ichiro; Kimura, Takashi; Orba, Yasuko; Ito, Kimihito; Sawa, Hirofumi 2016 2016-04-26 COMM-USE N PMC4845017 27113297.0 10.1038/srep24257 7czla3bw 0.550275 Tong_2009, Xu_L_2018 Asano_2016, Maganga_2014
64 Lei_S_2019 High prevalence and genetic diversity of hepatitis B viruses in insectivorous bats from China Lei, Si-Cong; Xiao, Xiao; Liu, Jian-Wei; Han, Hui-Ju; Gong, Xiao-Qing; Zhao, Min; Wang, Li-Jun; Qin, Xiang-Rong; Yu, Xue-Jie 2019 2019-11-30 PMC N PMC7092808 31400300.0 10.1016/j.actatropica.2019.105130 3zitd80y 0.550275 Sonntag_2009 Doysabas_2019
65 Bittar_2019 Alphacoronavirus Detection in Lungs, Liver, and Intestines of Bats from Brazil Bittar, Cíntia; Machado, Rafael Rahal Guaragna; Comelis, Manuela Tosi; Bueno, Larissa Mayumi; Beguelini, Mateus Rodrigues; Morielle-Versute, Eliana; Nogueira, Maurício Lacerda; Rahal, Paula 2019 2019-05-29 PMC N PMC7080140 31144002.0 10.1007/s00248-019-01391-x osbxayk6 0.542353 Tong_2009, Xu_L_2018, Wang_2015, de_Sales_Lima_2015 Asano_2016, Lee_D_2019, Doysabas_2019, Fischer_2016
66 Kemenesi_2015 Genetic diversity and recombination within bufaviruses: Detection of a novel strain in Hungarian bats Kemenesi, Gábor; Dallos, Bianka; Görföl, Tamás; Estók, Péter; Boldogh, Sándor; Kurucz, Kornélia; Oldal, Miklós; Marton, Szilvia; Bányai, Krisztián; Jakab, Ferenc 2015 2015-07-31 PMC N 25989375.0 10.1016/j.meegid.2015.05.017 guqcbg9b 0.542109 Tong_2009, Wang_2018, Chu_D_2009
67 Razanajatovo_2015 Detection of new genetic variants of Betacoronaviruses in Endemic Frugivorous Bats of Madagascar Razanajatovo, Norosoa H; Nomenjanahary, Lalaina A; Wilkinson, David A; Razafimanahaka, Julie H; Goodman, Steven M; Jenkins, Richard K; Jones, Julia PG; Heraud, Jean-Michel 2015 2015-03-12 COMM-USE N PMC4404003 25888853.0 10.1186/s12985-015-0271-y ghcwfcx2 0.537860 Xu_L_2018, Tong_2009, Kosoy_2010, Sonntag_2009 Lee_D_2019, Asano_2016, Epstein_2013, Wray_2016
68 Mendenhall_2017 Influence of age and body condition on astrovirus infection of bats in Singapore: An evolutionary and epidemiological analysis Mendenhall, Ian H.; Skiles, Maggie M.; Neves, Erica Sena; Borthwick, Sophie A.; Low, Dolyce H.W.; Liang, Benjamin; Lee, Benjamin P.Y.-H.; Su, Yvonne C.F.; Smith, Gavin J.D. 2017 2017-10-06 None N PMC5678831 29159263.0 10.1016/j.onehlt.2017.10.001 xox1x6sb 0.532640 Xu_L_2018, Tong_2009, Kosoy_2010, Roberton_2006 Wong_2019, Bittar_2019, Lee_D_2019
69 Pfefferle_2009 Distant Relatives of Severe Acute Respiratory Syndrome Coronavirus and Close Relatives of Human Coronavirus 229E in Bats, Ghana Pfefferle, Susanne; Oppong, Samuel; Drexler, Jan Felix; Gloza-Rausch, Florian; Ipsen, Anne; Seebens, Antje; Müller, Marcel A.; Annan, Augustina; Vallo, Peter; Adu-Sarkodie, Yaw; Kruppa, Thomas F.; Drosten, Christian 2009 2009-09-23 PMC N PMC2819850 19788804.0 10.3201/eid1509.090224 9r9ll83m 0.528529 Sonntag_2009, Xu_L_2018, Tong_2009 Zhou_2018
70 Zheng_2017 Viral metagenomics of six bat species in close contact with humans in southern China Zheng, Xue-yan; Qiu, Min; Guan, Wei-jie; Li, Jin-ming; Chen, Shao-wei; Cheng, Ming-ji; Huo, Shu-ting; Chen, Zhong; Wu, Yi; Jiang, Li-na; Chen, Qing 2017 2017-10-05 PMC N PMC7086785 28983731.0 10.1007/s00705-017-3570-3 8tuenv8q 0.527513 Xu_L_2018, Tong_2009, Wang_2015 Dacheux_2014, Lee_D_2019
71 Poon_2007 Detection of Group 1 Coronaviruses in Bats Using Universal Coronavirus Reverse Transcription Polymerase Chain Reactions Poon, Leo L.M.; Peiris, J.S. Malik 2007 2007-11-28 PMC Y PMC7122133 19057871.0 10.1007/978-1-59745-181-9_2 ekg91hmi 0.527016 Wang_2015
72 Quan_2010 Identification of a Severe Acute Respiratory Syndrome Coronavirus-Like Virus in a Leaf-Nosed Bat in Nigeria Quan, Phenix-Lan; Firth, Cadhla; Street, Craig; Henriquez, Jose A.; Petrosov, Alexandra; Tashmukhamedova, Alla; Hutchison, Stephen K.; Egholm, Michael; Osinubi, Modupe O. V.; Niezgoda, Michael; Ogunkoya, Albert B.; Briese, Thomas; Rupprecht, Charles E.; Lipkin, W. Ian 2010 2010-10-12 NONCOMM N PMC2975989 21063474.0 10.1128/mbio.00208-10 8pwe4ugb 0.524672 Wang_2015, Tong_2009 Zhou_2018
73 Gloza-Rausch_2008 Detection and Prevalence Patterns of Group I Coronaviruses in Bats, Northern Germany Gloza-Rausch, Florian; Ipsen, Anne; Seebens, Antje; Göttsche, Matthias; Panning, Marcus; Drexler, Jan Felix; Petersen, Nadine; Annan, Augustina; Grywna, Klaus; Müller, Marcel; Pfefferle, Susanne; Drosten, Christian 2008 2008-04-23 PMC N PMC2570906 18400147.0 10.3201/eid1404.071439 tzb2emm2 0.524302 Kosoy_2010, Xu_L_2018, Sonntag_2009, Ceballos_2013 Bittar_2019, Wong_2019, Lee_D_2019
74 Kim_H_2016 Detection of Severe Acute Respiratory Syndrome‐Like, Middle East Respiratory Syndrome‐Like Bat Coronaviruses and Group H Rotavirus in Faeces of Korean Bats Kim, H. K.; Yoon, S.‐W.; Kim, D.‐J.; Koo, B.‐S.; Noh, J. Y.; Kim, J. H.; Choi, Y. G.; Na, W.; Chang, K.‐T.; Song, D.; Jeong, D. G. 2016 2016-05-23 PMC N PMC7169817 27213718.0 10.1111/tbed.12515 mtfrbn87 0.522691 Wang_2015
75 Hu_D_2017 Virome analysis for identification of novel mammalian viruses in bats from Southeast China Hu, Dan; Zhu, Changqiang; Wang, Yi; Ai, Lele; Yang, Lu; Ye, Fuqiang; Ding, Chenxi; Chen, Jiafeng; He, Biao; Zhu, Jin; Qian, Hui; Xu, Wenrong; Feng, Youjun; Tan, Weilong; Wang, Changjun 2017 2017-09-07 COMM-USE N PMC5589946 28883450.0 10.1038/s41598-017-11384-w lc9hvhn3 0.516496 Wang_2015, Tong_2009, Xu_L_2018 Doysabas_2019
76 Yang_2013 Novel SARS-like Betacoronaviruses in Bats, China, 2011 Yang, Li; Wu, Zhiqiang; Ren, Xianwen; Yang, Fan; He, Guimei; Zhang, Junpeng; Dong, Jie; Sun, Lilian; Zhu, Yafang; Du, Jiang; Zhang, Shuyi; Jin, Qi 2013 2013-06-23 PMC N PMC3713832 23739658.0 10.3201/eid1906.121648 i6g23sgh 0.514022 Xu_L_2018, Kosoy_2010, Tong_2009, Sonntag_2009 Góes_2016, Lee_D_2019
77 Annan_2013 Human Betacoronavirus 2c EMC/2012–related Viruses in Bats, Ghana and Europe Annan, Augustina; Baldwin, Heather J.; Corman, Victor Max; Klose, Stefan M.; Owusu, Michael; Nkrumah, Evans Ewald; Badu, Ebenezer Kofi; Anti, Priscilla; Agbenyega, Olivia; Meyer, Benjamin; Oppong, Samuel; Sarkodie, Yaw Adu; Kalko, Elisabeth K.V.; Lina, Peter H.C.; Godlevska, Elena V.; Reusken, Chantal; Seebens, Antje; Gloza-Rausch, Florian; Vallo, Peter; Tschapka, Marco; Drosten, Christian; Drexler, Jan Felix 2013 2013-03-23 PMC N PMC3647674 23622767.0 10.3201/eid1903.121503 sg2p6noo 0.514022 Sonntag_2009, Kosoy_2010, Xu_L_2018 Lee_D_2019
78 Urushadze_2017 Prevalence, diversity, and host associations of Bartonella strains in bats from Georgia (Caucasus) Urushadze, Lela; Bai, Ying; Osikowicz, Lynn; McKee, Clifton; Sidamonidze, Ketevan; Putkaradze, Davit; Imnadze, Paata; Kandaurov, Andrei; Kuzmin, Ivan; Kosoy, Michael 2017 2017-04-11 COMM-USE N PMC5400274 28399125.0 10.1371/journal.pntd.0005428 mfvcjkh4 0.506636 Kosoy_2010, Xu_L_2018 Lin_J_2012, Lee_D_2019, Becker_2018
79 Doysabas_2019 Encephalomyocarditis virus is potentially derived from eastern bent-wing bats living in East Asian countries Doysabas, Karla Cristine C.; Oba, Mami; Furuta, Masaya; Iida, Keisuke; Omatsu, Tsutomu; Furuya, Tetsuya; Okada, Takashi; Sutummaporn, Kripitch; Shimoda, Hiroshi; Wong, Min-Liang; Wu, Chung-Hsin; Ohmori, Yasushige; Kobayashi, Ryosuke; Hengjan, Yupadee; Yonemitsu, Kenzo; Kuwata, Ryusei; Kim, Yoo-Kyung; Han, Sang-Hyun; Sohn, Joon-Hyuk; Han, Sang-Hoon; Suzuki, Kazuo; Kimura, Junpei; Maeda, Ken; Oh, Hong-Shik; Endoh, Daiji; Mizutani, Tetsuya; Hondo, Eiichi 2019 2019-01-02 PMC N PMC7114854 30391400.0 10.1016/j.virusres.2018.10.020 c9kpohz5 0.504638 Xu_L_2018, Sonntag_2009 Lee_D_2019
80 Müller_2007 Coronavirus Antibodies in African Bat Species Müller, Marcel A.; Paweska, Janusz T.; Leman, Patricia A.; Drosten, Christian; Grywna, Klaus; Kemp, Alan; Braack, Leo; Sonnenberg, Karen; Niedrig, Matthias; Swanepoel, Robert 2007 2007-09-23 PMC N PMC2857293 18252111.0 10.3201/eid1309.070342 ifgfzcsl 0.501220 Tong_2009 Amer_2018
81 Leopardi_2016 The close genetic relationship of lineage D Betacoronavirus from Nigerian and Kenyan straw-colored fruit bats (Eidolon helvum) is consistent with the existence of a single epidemiological unit across sub-Saharan Africa Leopardi, Stefania; Oluwayelu, Daniel; Meseko, Clement; Marciano, Sabrina; Tassoni, Luca; Bakarey, Solomon; Monne, Isabella; Cattoli, Giovanni; De Benedictis, Paola 2016 2016-04-08 PMC N PMC7089189 27059240.0 10.1007/s11262-016-1331-0 ebnhqcr7 0.500501 Xu_L_2018, Tong_2009 Ogawa_2015
82 Vibin_2018 Metagenomics detection and characterisation of viruses in faecal samples from Australian wild birds Vibin, Jessy; Chamings, Anthony; Collier, Fiona; Klaassen, Marcel; Nelson, Tiffanie M.; Alexandersen, Soren 2018 2018-06-06 None N PMC5989203 29875375.0 10.1038/s41598-018-26851-1 l2n0xvmd 0.496392 Wang_2015 Dacheux_2014
83 Hu_H_2018 Development of a one-step RT-PCR assay for detection of pancoronaviruses (α-, β-, γ-, and δ-coronaviruses) using newly designed degenerate primers for porcine and avian `fecal samples Hu, Hui; Jung, Kwonil; Wang, Qiuhong; Saif, Linda J.; Vlasova, Anastasia N. 2018 2018-06-30 PMC N PMC7113874 29499225.0 10.1016/j.jviromet.2018.02.021 xnp3ytp1 0.495037
84 Feng_2019 Genetic diversity of the Yokose virus, XYBX1332, isolated from bats (Myotis daubentonii) in China Feng, Yun; Ren, Xiaojie; Xu, Ziqian; Fu, Shihong; Li, Xiaolong; Zhang, Hailin; Yang, Weihong; Zhang, Yuzhen; Liang, Guodong 2019 2019-01-11 COMM-USE N PMC6330390 30634973.0 10.1186/s12985-018-1107-3 pq8f8ylz 0.494703 Xu_L_2018 Lee_D_2019
85 Chamings_2018 Detection and characterisation of coronaviruses in migratory and non-migratory Australian wild birds Chamings, Anthony; Nelson, Tiffanie M.; Vibin, Jessy; Wille, Michelle; Klaassen, Marcel; Alexandersen, Soren 2018 2018-04-13 COMM-USE N PMC5899083 29654248.0 10.1038/s41598-018-24407-x z36p5jo6 0.492406 Xu_L_2018, Sonntag_2009, Tong_2009 Barbosa_2019, Markotter_2019, Lee_D_2019
86 Joffrin_2019 Astrovirus in Reunion Free-tailed Bat (Mormopterus francoismoutoui) Léa Joffrin; Axel O. G. Hoarau; Erwan Lagadec; Patrick Mavingui; Camille Lebarbenchon 2019 2019-09-19 BioRxiv N 10.1101/774224 zhksllo7 0.492154 Xu_L_2018, Sonntag_2009, Tong_2009, Wang_2015 Lee_D_2019, Hoarau_2018
87 Tsoleridis_2019 Discovery and Prevalence of Divergent RNA Viruses in European Field Voles and Rabbits Tsoleridis, Theocharis; Chappell, Joseph G.; Monchatre-Leroy, Elodie; Umhang, Gérald; Shi, Mang; Bennett, Malcolm; Tarlinton, Rachael E.; McClure, C. Patrick; Holmes, Edward C.; Ball, Jonathan K. 2019 2019-12-31 COMM-USE N PMC7019641 31906044.0 10.3390/v12010047 c1qqbhl8 0.492022 Wang_2015 Wu_Z_2018
88 Lelli_2013 Detection of Coronaviruses in Bats of Various Species in Italy Lelli, Davide; Papetti, Alice; Sabelli, Cristiano; Rosti, Enrica; Moreno, Ana; Boniotti, Maria B. 2013 2013-10-31 COMM-USE N PMC3856409 24184965.0 10.3390/v5112679 t0q8l7ly 0.491743 Xu_L_2018, Kosoy_2010, Sonntag_2009, Tong_2009, Ceballos_2013 Lecis_2018, Bittar_2019, Goffard_2015, Asano_2016
89 Balboni_2011 A Real-Time PCR Assay for Bat SARS-Like Coronavirus Detection and Its Application to Italian Greater Horseshoe Bat Faecal Sample Surveys Balboni, Andrea; Gallina, Laura; Palladini, Alessandra; Prosperi, Santino; Battilani, Mara 2011 2011-11-22 COMM-USE N PMC3353321 22654650.0 10.1100/2012/989514 fcl2g5wr 0.490777
90 Yinda_2018 Cameroonian fruit bats harbor divergent viruses, including rotavirus H, bastroviruses, and picobirnaviruses using an alternative genetic code Yinda, Claude Kwe; Ghogomu, Stephen Mbigha; Conceição-Neto, Nádia; Beller, Leen; Deboutte, Ward; Vanhulle, Emiel; Maes, Piet; Van Ranst, Marc; Matthijnssens, Jelle 2018 2018-03-30 NONCOMM N PMC5888411 29644096.0 10.1093/ve/vey008 1n9b4kv7 0.485045 Xu_L_2018, Tong_2009, Wang_2015 Lee_D_2019, Wu_Z_2018, Yinda_2016
91 Wang_2007 Full-length genome sequence and genetic relationship of two paramyxoviruses isolated from bat and pigs in the Americas Wang, L.-F.; Hansson, E.; Yu, M.; Chua, K. B.; Mathe, N.; Crameri, G.; Rima, B. K.; Moreno-López, J.; Eaton, B. T. 2007 2007-03-26 PMC N PMC7086891 17385069.0 10.1007/s00705-007-0959-4 vojecv3d 0.482710
92 Wang_2015 Discovery, diversity and evolution of novel coronaviruses sampled from rodents in China Wang, Wen; Lin, Xian-Dan; Guo, Wen-Ping; Zhou, Run-Hong; Wang, Miao-Ruo; Wang, Cai-Qiao; Ge, Shuang; Mei, Sheng-Hua; Li, Ming-Hui; Shi, Mang; Holmes, Edward C.; Zhang, Yong-Zhen 2015 2015-01-01 PMC N PMC7112057 25463600.0 10.1016/j.virol.2014.10.017 5lm5ttai 0.479845 Xu_L_2018, Wang_2015 Wu_Z_2018, Wang_2017, Tsoleridis_2019, Ge_X_2017
93 McKillen_2017 Detection of a novel gammaherpesvirus (genus Rhadinovirus) in wild muntjac deer in Northern Ireland McKillen, John; Hogg, Kayleigh; Lagan, Paula; Ball, Cheryl; Doherty, Simon; Reid, Neil; Collins, Lisa; Dick, Jaimie T. A. 2017 2017-02-15 PMC N PMC7086968 28204896.0 10.1007/s00705-017-3254-z 6pshmsuq 0.477940
94 van_Boheemen_2012 A Family-Wide RT-PCR Assay for Detection of Paramyxoviruses and Application to a Large-Scale Surveillance Study van Boheemen, Sander; Bestebroer, Theo M.; Verhagen, Josanne H.; Osterhaus, Albert D. M. E.; Pas, Suzan D.; Herfst, Sander; Fouchier, Ron A. M. 2012 2012-04-04 COMM-USE N PMC3319594 22496880.0 10.1371/journal.pone.0034961 aotrkajb 0.476645
95 Jansen_van_Vuren_2016 Isolation of a Novel Fusogenic Orthoreovirus from Eucampsipoda africana Bat Flies in South Africa Jansen van Vuren, Petrus; Wiley, Michael; Palacios, Gustavo; Storm, Nadia; McCulloch, Stewart; Markotter, Wanda; Birkhead, Monica; Kemp, Alan; Paweska, Janusz T. 2016 2016-02-29 COMM-USE N PMC4810255 27011199.0 10.3390/v8030065 cz88t29n 0.471821 Xu_L_2018, Wang_2015 Maganga_2014, Lee_D_2019
96 Freuling_2011 Novel Lyssavirus in Natterer’s Bat, Germany Freuling, Conrad M.; Beer, Martin; Conraths, Franz J.; Finke, Stefan; Hoffmann, Bernd; Keller, Barbara; Kliemt, Jeannette; Mettenleiter, Thomas C.; Mühlbach, Elke; Teifke, Jens P.; Wohlsein, Peter; Müller, Thomas 2011 2011-08-23 PMC N PMC3381583 21801640.0 10.3201/eid1708.110201 znd4z823 0.470933 Xu_L_2018, Sonntag_2009 Ceballos_2013, Lee_D_2019
97 Luo_Y_2018 Longitudinal Surveillance of Betacoronaviruses in Fruit Bats in Yunnan Province, China During 2009–2016 Luo, Yun; Li, Bei; Jiang, Ren-Di; Hu, Bing-Jie; Luo, Dong-Sheng; Zhu, Guang-Jian; Hu, Ben; Liu, Hai-Zhou; Zhang, Yun-Zhi; Yang, Xing-Lou; Shi, Zheng-Li 2018 2018-02-01 PMC N PMC6178081 29500692.0 10.1007/s12250-018-0017-2 u1uup5da 0.469867 Xu_L_2018, Tong_2009 Lau_S_2019, Lee_D_2019
98 Luo_Z_2011 Multiple novel and prevalent astroviruses in pigs Luo, Zhiyao; Roi, Stéphanie; Dastor, Margaux; Gallice, Estelle; Laurin, Marc-André; L’Homme, Yvan 2011 2011-05-05 PMC N 21159453.0 10.1016/j.vetmic.2010.11.026 k5u640q3 0.468405 Tong_2009, de_Sales_Lima_2015, Xu_L_2018
99 Durães-Carvalho_2015 Coronaviruses Detected in Brazilian Wild Birds Reveal Close Evolutionary Relationships with Beta- and Deltacoronaviruses Isolated From Mammals Durães-Carvalho, Ricardo; Caserta, Leonardo C.; Barnabé, Ana C. S.; Martini, Matheus C.; Ferreira, Helena L.; Felippe, Paulo A. N.; Santos, Márcia B.; Arns, Clarice W. 2015 2015-08-07 PMC N PMC7079945 26250156.0 10.1007/s00239-015-9693-9 av4uutjl 0.466728 Xu_L_2018, Wang_2015, Tong_2009 Bittar_2019, Barbosa_2019, Asano_2016
100 Muradrasoli_2009 Broadly targeted multiprobe QPCR for detection of coronaviruses: Coronavirus is common among mallard ducks (Anas platyrhynchos) Muradrasoli, Shaman; Mohamed, Nahla; Hornyák, Ákos; Fohlman, Jan; Olsen, Björn; Belák, Sándor; Blomberg, Jonas 2009 2009-08-31 PMC N PMC7112901 19406168.0 10.1016/j.jviromet.2009.04.022 cfdhxey1 0.464808 Wang_2015
101 Sobolev_2016 Characterization of avian paramyxovirus type 6 isolated from a Eurasian teal in the intersection of migratory flyways in Russia Sobolev, Ivan A.; Sharshov, Kirill; Yurchenko, Kseniya; Korneev, Denis; Glushchenko, Alexandra; Alikina, Tatyana; Kabilov, Marsel; Bi, Yuhai; Liu, Wenjun; Gubanova, Natalia; Shestopalov, Alexander 2016 2016-08-29 PMC N PMC7086963 27573675.0 10.1007/s00705-016-3029-y lrc0hhsv 0.460255 Xu_L_2018, Takekawa_2010, Sonntag_2009, Roberton_2006
102 Wang_2017 Discovery and genetic analysis of novel coronaviruses in least horseshoe bats in southwestern China Wang, Lihua; Fu, Shihong; Cao, Yuxi; Zhang, Hailin; Feng, Yun; Yang, Weihong; Nie, Kai; Ma, Xuejun; Liang, Guodong 2017 2017-03-29 COMM-USE N PMC5378919 28352124.0 10.1038/emi.2016.140 632hqjpo 0.457560 Xu_L_2018, Tong_2009 Lee_D_2019
103 Han_H_2017 Novel coronaviruses, astroviruses, adenoviruses and circoviruses in insectivorous bats from northern China Han, H.‐J.; Wen, H.‐L.; Zhao, L.; Liu, J.‐W.; Luo, L.‐M.; Zhou, C.‐M.; Qin, X.‐R.; Zhu, Y.‐L.; Liu, M.‐M.; Qi, R.; Li, W.‐Q.; Yu, H.; Yu, X.‐J. 2017 2017-04-01 PMC N PMC7165899 28371451.0 10.1111/zph.12358 39kk5jmb 0.455918 Xu_L_2018, Tong_2009, Sonntag_2009
104 Lim_X_2019 Detection and characterization of a novel bat-borne coronavirus in Singapore using multiple molecular approaches Lim, Xiao Fang; Lee, Chengfa Benjamin; Pascoe, Sarah Marie; How, Choon Beng; Chan, Sharon; Tan, Jun Hao; Yang, Xinglou; Zhou, Peng; Shi, Zhengli; Sessions, October M.; Wang, Lin-Fa; Ng, Lee Ching; Anderson, Danielle E.; Yap, Grace 2019 2019-10-01 COMM-USE N PMC7079695 31418677.0 10.1099/jgv.0.001307 e5aau2s0 0.455559 Xu_L_2018, Tong_2009, Straková_2017 Wang_2017, Doysabas_2019
105 Tse_H_2012 Discovery and Genomic Characterization of a Novel Bat Sapovirus with Unusual Genomic Features and Phylogenetic Position Tse, Herman; Chan, Wan-Mui; Li, Kenneth S. M.; Lau, Susanna K. P.; Woo, Patrick C. Y.; Yuen, Kwok-Yung 2012 2012-04-13 COMM-USE N PMC3325917 22514697.0 10.1371/journal.pone.0034987 alyn1i00 0.451270 Xu_L_2018, Tong_2009, Wang_2015 Wang_2019
106 Jones-Engel_2005 Primate-to-Human Retroviral Transmission in Asia Jones-Engel, Lisa; Engel, Gregory A.; Schillaci, Michael A.; Rompis, Aida; Putra, Artha; Suaryana, Komang Gde; Fuentes, Agustin; Beer, Brigitte; Hicks, Sarah; White, Robert; Wilson, Brenda; Allan, Jonathan S. 2005 2005-07-23 PMC N PMC3371821 16022776.0 10.3201/eid1107.040957 cj4zlr3c 0.449758
107 Van_Nguyen_2018 Detection and Characterization of Homologues of Human Hepatitis Viruses and Pegiviruses in Rodents and Bats in Vietnam Van Nguyen, Dung; Van Nguyen, Cuong; Bonsall, David; Ngo, Tue Tri; Carrique-Mas, Juan; Pham, Anh Hong; Bryant, Juliet E.; Thwaites, Guy; Baker, Stephen; Woolhouse, Mark; Simmonds, Peter 2018 2018-02-28 COMM-USE N PMC5869495 29495551.0 10.3390/v10030102 0jtfc271 0.446790 Xu_L_2018, Wang_2015, Tong_2009
108 Liu_S_2018 How many species of Apodemus and Rattus occur in China? A survey based on mitochondrial cyt b and morphological analyses Liu, Shao-Ying; He, Kai; Chen, Shun-De; Jin, Wei; Murphy, Robert W.; Tang, Ming-Kun; Liao, Rui; Li, Feng-Jun 2018 2018-06-19 COMM-USE N PMC6102683 29955026.0 10.24272/j.issn.2095-8137.2018.053 bdkpriuk 0.444103 Kosoy_2010, Xu_L_2018 Lin_J_2012, Ramírez_2014
109 Lima_2013 Detection of Alphacoronavirus in velvety free-tailed bats (Molossus molossus) and Brazilian free-tailed bats (Tadarida brasiliensis) from urban area of Southern Brazil Lima, Francisco Esmaile de Sales; Campos, Fabrício Souza; Kunert Filho, Hiran Castagnino; Batista, Helena Beatriz de Carvalho Ruthner; Carnielli Júnior, Pedro; Cibulski, Samuel Paulo; Spilki, Fernando Rosado; Roehe, Paulo Michel; Franco, Ana Cláudia 2013 2013-03-16 PMC N PMC7089283 23504146.0 10.1007/s11262-013-0899-x 0pzjyrdf 0.444103 Kosoy_2010, Xu_L_2018, Sonntag_2009, Wang_2015 Lee_D_2019, Bonny_2017, Asano_2016, Bittar_2019
110 Yinda_2016 Evidence for reassortment of highly divergent novel rotaviruses from bats in Cameroon, without evidence for human interspecies transmissions Claude Kwe Yinda; Mark Zeller; Nádia Conceição-Neto; Piet Maes; Ward Deboutte; Leen Beller; Elisabeth Heylen; Stephen Mbigha Ghogomu; Marc Van Ranst; Jelle Matthijnssens 2016 2016-05-18 BioRxiv N 10.1101/054072 76i8yvb4 0.441321 Xu_L_2018, Tong_2009 Yinda_2016, Lee_D_2019
111 Breed_2010 Prevalence of Henipavirus and Rubulavirus Antibodies in Pteropid Bats, Papua New Guinea Breed, Andrew C.; Yu, Meng; Barr, Jennifer A.; Crameri, Gary; Thalmann, Claudia M.; Wang, Lin-Fa 2010 2010-12-23 PMC N PMC3294587 21122242.0 10.3201/eid1612.100879 xo8qzhna 0.441116 Epstein_2013
112 Hepojoki_2017 Prevalence and genetic diversity of coronaviruses in wild birds, Finland Hepojoki, Satu; Lindh, Erika; Vapalahti, Olli; Huovilainen, Anita 2017 2017-11-28 COMM-USE N PMC6369310 30788065.0 10.1080/20008686.2017.1408360 peq0auvi 0.440328 Wang_2015, Tong_2009, Xu_L_2018 Barbosa_2019, Wu_Z_2018, Amer_2018, Wong_2019
113 Xu_L_2015 Novel hantavirus identified in black-bearded tomb bats, China Xu, Lin; Wu, Jianmin; He, Biao; Qin, Shaomin; Xia, Lele; Qin, Minchao; Li, Nan; Tu, Changchun 2015 2015-04-30 PMC N 10.1016/j.meegid.2015.01.018 na1jhy6u 0.436698 Xu_L_2018, Tong_2009
114 Wang_2019 Characterization of a New Member of Alphacoronavirus with Unique Genomic Features in Rhinolophus Bats Wang, Ning; Luo, Chuming; Liu, Haizhou; Yang, Xinglou; Hu, Ben; Zhang, Wei; Li, Bei; Zhu, Yan; Zhu, Guangjian; Shen, Xurui; Peng, Cheng; Shi, Zhengli 2019 2019-04-24 COMM-USE N PMC6521148 31022925.0 10.3390/v11040379 7vk6g34z 0.432503 Wang_2018, Wang_2015
115 Bonny_2017 Detection of Alphacoronavirus vRNA in the Feces of Brazilian Free-Tailed Bats (Tadarida brasiliensis) from a Colony in Florida, USA Bonny, Tania S.; Driver, John P.; Paisie, Taylor; Salemi, Marco; Morris, John Glenn; Shender, Lisa A.; Smith, Lisa; Enloe, Carolyn; Oxenrider, Kevin; Gore, Jeffery A.; Loeb, Julia C.; Wu, Chang-Yu; Lednicky, John A. 2017 2017-02-27 COMM-USE N PMC5456339 28933360.0 10.3390/diseases5010007 9moxkqfh 0.432024 Xu_L_2018, Tong_2009, Kosoy_2010, Banyard_2013, Wang_2015 Lee_D_2019, Bittar_2019, Maganga_2014, Asano_2016
116 Wang_2019 Prevalence of Wēnzhōu virus in small mammals in Yunnan Province, China Wang, Jinxia; Yang, Xinglou; Liu, Haizhou; Wang, Li; Zhou, Jihua; Han, Xi; Zhu, Yan; Yang, Weihong; Pan, Hong; Zhang, Yunzhi; Shi, Zhengli 2019 2019-02-15 COMM-USE N PMC6395006 30768614.0 10.1371/journal.pntd.0007049 k5uqdybi 0.429951 Doysabas_2019
117 Ge_X_2017 Detection of alpha- and betacoronaviruses in rodents from Yunnan, China Ge, Xing-Yi; Yang, Wei-Hong; Zhou, Ji-Hua; Li, Bei; Zhang, Wei; Shi, Zheng-Li; Zhang, Yun-Zhi 2017 2017-05-26 COMM-USE N PMC5446729 28549438.0 10.1186/s12985-017-0766-9 qb0jtsdk 0.428330 Tong_2009, Xu_L_2018, Wang_2015 Bittar_2019, Wang_2019, Asano_2016
118 Ge_X_2016 Coexistence of multiple coronaviruses in several bat colonies in an abandoned mineshaft Ge, Xing-Yi; Wang, Ning; Zhang, Wei; Hu, Ben; Li, Bei; Zhang, Yun-Zhi; Zhou, Ji-Hua; Luo, Chu-Ming; Yang, Xing-Lou; Wu, Li-Jun; Wang, Bo; Zhang, Yun; Li, Zong-Xiao; Shi, Zheng-Li 2016 2016-02-18 PMC N PMC7090819 26920708.0 10.1007/s12250-016-3713-9 a03yoj96 0.427489 Xu_L_2018, Tong_2009 Asano_2016, Rihtarič_2010, Canuti_2011
119 Yuan_2012 Serological evidence of ebolavirus infection in bats, China Yuan, Junfa; Zhang, Yuji; Li, Jialu; Zhang, Yunzhi; Wang, Lin-Fa; Shi, Zhengli 2012 2012-10-13 COMM-USE N PMC3492202 23062147.0 10.1186/1743-422x-9-236 4l3sede1 0.424642
120 Bourgarel_2018 Circulation of Alphacoronavirus, Betacoronavirus and Paramyxovirus in Hipposideros bat species in Zimbabwe Bourgarel, Mathieu; Pfukenyi, Davies M.; Boué, Vanina; Talignani, Loïc; Chiweshe, Ngoni; Diop, Fodé; Caron, Alexandre; Matope, Gift; Missé, Dorothée; Liégeois, Florian 2018 2018-03-31 None N PMC7106086 29331670.0 10.1016/j.meegid.2018.01.007 oyo3n7e1 0.424531 Asano_2016, Maganga_2014
121 Yinda_2016 Novel highly divergent reassortant bat rotaviruses in Cameroon, without evidence of zoonosis Yinda, Claude Kwe; Zeller, Mark; Conceição-Neto, Nádia; Maes, Piet; Deboutte, Ward; Beller, Leen; Heylen, Elisabeth; Ghogomu, Stephen Mbigha; Van Ranst, Marc; Matthijnssens, Jelle 2016 2016-09-26 COMM-USE N PMC5035928 27666390.0 10.1038/srep34209 npefpo3t 0.420979 Lee_D_2019, Yinda_2016
122 Ogawa_2015 Molecular epidemiology of pathogenic Leptospira spp. in the straw-colored fruit bat (Eidolon helvum) migrating to Zambia from the Democratic Republic of Congo Ogawa, Hirohito; Koizumi, Nobuo; Ohnuma, Aiko; Mutemwa, Alisheke; Hang’ombe, Bernard M.; Mweene, Aaron S.; Takada, Ayato; Sugimoto, Chihiro; Suzuki, Yasuhiko; Kida, Hiroshi; Sawa, Hirofumi 2015 2015-06-30 None N PMC7106174 25791930.0 10.1016/j.meegid.2015.03.013 t3z1hbox 0.420351 Kosoy_2010, Xu_L_2018, Urushadze_2017
123 Chu_D_2010 Detection of novel astroviruses in urban brown rats and previously known astroviruses in humans Chu, Daniel K. W.; Chin, Alex W. H.; Smith, Gavin J.; Chan, Kwok-Hung; Guan, Yi; Peiris, J. S. Malik; Poon, Leo L. M. 2010 2010-10-23 PMC N PMC3052596 20554799.0 10.1099/vir.0.022764-0 ughtuxpu 0.420228 Tong_2009, Wang_2015 Lee_D_2019
124 Canuti_2019 Discovery and Characterization of Novel RNA Viruses in Aquatic North American Wild Birds Canuti, Marta; Kroyer, Ashley N. K.; Ojkic, Davor; Whitney, Hugh G.; Robertson, Gregory J.; Lang, Andrew S. 2019 2019-08-21 None N PMC6784231 31438486.0 10.3390/v11090768 73xmjfxt 0.415551 Xu_L_2018 Lee_D_2019, Canuti_2011, Maganga_2014
125 Ao_Y_2017 Two novel bocaparvovirus species identified in wild Himalayan marmots Ao, Yuanyun; Li, Xiaoyue; Li, Lili; Xie, Xiaolu; Jin, Dong; Yu, Jiemei; Lu, Shan; Duan, Zhaojun 2017 2017-12-05 PMC N PMC7089499 29218438.0 10.1007/s11427-017-9231-4 zes4t29p 0.413496 Xu_L_2018
126 Leopardi_2018 Interplay between co-divergence and cross-species transmission in the evolutionary history of bat coronaviruses Leopardi, Stefania; Holmes, Edward C.; Gastaldelli, Michele; Tassoni, Luca; Priori, Pamela; Scaravelli, Dino; Zamperin, Gianpiero; De Benedictis, Paola 2018 2018-03-31 None N PMC7106311 29355607.0 10.1016/j.meegid.2018.01.012 r0sk55fj 0.411018 Tong_2009, Xu_L_2018, Wang_2018, Wang_2015 Becker_2019, Tsoleridis_2019
127 Xu_L_2019 Seroprevalence, cross antigenicity and circulation sphere of bat-borne hantaviruses revealed by serological and antigenic analyses Xu, Lin; Wu, Jianmin; Li, Qi; Wei, Yamei; Tan, Zhizhou; Cai, Jianqiu; Guo, Huancheng; Yang, Ling’en; Huang, Xiaohong; Chen, Jing; Zhang, Fuqiang; He, Biao; Tu, Changchun 2019 2019-01-22 COMM-USE N PMC6358112 30668611.0 10.1371/journal.ppat.1007545 nbv8sfoo 0.410993 Xu_L_2018
128 Barbosa_2019 Divergent coronaviruses detected in wild birds in Brazil, including a central park in São Paulo Barbosa, Carla M.; Durigon, Edison L.; Thomazelli, Luciano M.; Ometto, Tatiana; Marcatti, Roberta; Nardi, Marcello Shiavo; de Aguiar, Daniel M.; Pinho, João Batista; Petry, Maria Virginia; Neto, Isaac Simão; Serafini, Patrícia; Rodrigues, Roberta Costa; de Azevedo Junior, Severino Mendes; Góes, Luiz Gustavo B.; de Araujo, Jansen 2019 2019-03-15 PMC N PMC6863219 30877663.0 10.1007/s42770-019-00065-7 0e2809hr 0.409451 Wang_2015 Lee_D_2019
129 Wang_2017 Detection and characterization of three zoonotic viruses in wild rodents and shrews from Shenzhen city, China Wang, Bo; Cai, Chun-Lin; Li, Bei; Zhang, Wei; Zhu, Yan; Chen, Wei-Hong; Zhuo, Fei; Shi, Zheng-Li; Yang, Xing-Lou 2017 2017-07-17 PMC N PMC6598888 28721632.0 10.1007/s12250-017-3973-z qgy3xk73 0.408046 Tong_2009 Wu_Z_2018, Wray_2016
130 Esona_2010 Reassortant Group A Rotavirus from Straw-colored Fruit Bat (Eidolon helvum) Esona, Mathew D.; Mijatovic-Rustempasic, Slavica; Conrardy, Christina; Tong, Suxiang; Kuzmin, Ivan V.; Agwanda, Bernard; Breiman, Robert F.; Banyai, Krisztian; Niezgoda, Michael; Rupprecht, Charles E.; Gentsch, Jon R.; Bowen, Michael D. 2010 2010-12-23 PMC N PMC3294550 21122212.0 10.3201/eid1612.101089 rrkzac8b 0.405101
131 Lin_J_2012 Identification of novel Bartonella spp. in bats and evidence of Asian gray shrew as a new potential reservoir of Bartonella Lin, Jen-Wei; Hsu, Yuan-Man; Chomel, Bruno B.; Lin, Liang-Kong; Pei, Jai-Chyi; Wu, Sheng-Hai; Chang, Chao-Chin 2012 2012-04-23 PMC N PMC7126237 22005177.0 10.1016/j.vetmic.2011.09.031 r0pdg96m 0.404830 Kosoy_2010, Xu_L_2018, Urushadze_2017 Lee_D_2019, Ramírez_2014
132 Sasaki_2018 Identification of group A rotaviruses from Zambian fruit bats provides evidence for long-distance dispersal events in Africa Sasaki, Michihito; Kajihara, Masahiro; Changula, Katendi; Mori-Kajihara, Akina; Ogawa, Hirohito; Hang'ombe, Bernard M.; Mweene, Aaron S.; Simuunza, Martin; Yoshida, Reiko; Carr, Michael; Orba, Yasuko; Takada, Ayato; Sawa, Hirofumi 2018 2018-09-30 PMC N 29792990.0 10.1016/j.meegid.2018.05.016 rcr2ge0g 0.396594 Xu_L_2018, Kosoy_2010, Tong_2009
133 Caron_2019 Chloroplast DNA variation in a hyperdiverse tropical tree community Caron, Henri; Molino, Jean‐François; Sabatier, Daniel; Léger, Patrick; Chaumeil, Philippe; Scotti‐Saintagne, Caroline; Frigério, Jean‐Marc; Scotti, Ivan; Franc, Alain; Petit, Rémy J. 2019 2019-03-26 COMM-USE N PMC6476754 31031952.0 10.1002/ece3.5096 6v3ojnl8 0.395505 McCoy_2003
134 Baker_2012 Co-circulation of diverse paramyxoviruses in an urban African fruit bat population Baker, K. S.; Todd, S.; Marsh, G.; Fernandez-Loras, A.; Suu-Ire, R.; Wood, J. L. N.; Wang, L. F.; Murcia, P. R.; Cunningham, A. A. 2012 2012-04-23 COMM-USE N PMC3542712 22205718.0 10.1099/vir.0.039339-0 foxcukmn 0.395291 Wang_2018, Luis_2015 Chua_2011, Lee_D_2019, Epstein_2013, Becker_2019
135 Wacharapluesadee_2018 Longitudinal study of age-specific pattern of coronavirus infection in Lyle’s flying fox (Pteropus lylei) in Thailand Wacharapluesadee, Supaporn; Duengkae, Prateep; Chaiyes, Aingorn; Kaewpom, Thongchai; Rodpan, Apaporn; Yingsakmongkon, Sangchai; Petcharat, Sininat; Phengsakul, Patcharakiti; Maneeorn, Pattarapol; Hemachudha, Thiravat 2018 2018-02-20 COMM-USE N PMC5819653 29463282.0 10.1186/s12985-018-0950-6 3obrivd7 0.394419 Breed_2010, Sonntag_2009, Xu_L_2018 Epstein_2013, Colombi_2019, Lee_D_2019, Wray_2016
136 Mishra_2019 A viral metagenomic survey identifies known and novel mammalian viruses in bats from Saudi Arabia Mishra, Nischay; Fagbo, Shamsudeen F.; Alagaili, Abdulaziz N.; Nitido, Adam; Williams, Simon H.; Ng, James; Lee, Bohyun; Durosinlorun, Abdulkareem; Garcia, Joel A.; Jain, Komal; Kapoor, Vishal; Epstein, Jonathan H.; Briese, Thomas; Memish, Ziad A.; Olival, Kevin J.; Lipkin, W. Ian 2019 2019-04-10 COMM-USE N PMC6457491 30969980.0 10.1371/journal.pone.0214227 4kvkioa3 0.390535 Mendenhall_2019, Lecis_2018
137 Liang_2017 Detection of diverse viruses in alimentary specimens of bats in Macau Liang, Jie; Yang, Xing-Lou; Li, Bei; Liu, Qi; Zhang, Qin; Liu, Hui; Kan, Hon-Pio; Wong, Kai-Chin; Chek, Si-Nga; He, Xiangyang; Peng, Xingwen; Shi, Zheng-Li; Wu, Yi; Zhang, Libiao 2017 2017-06-01 PMC N PMC6598931 28589292.0 10.1007/s12250-017-3976-9 8xs4u9j6 0.390144 Weaver_2004 Chua_2011, Lee_D_2019, Epstein_2013
138 Waruhiu_2017 Molecular detection of viruses in Kenyan bats and discovery of novel astroviruses, caliciviruses and rotaviruses Waruhiu, Cecilia; Ommeh, Sheila; Obanda, Vincent; Agwanda, Bernard; Gakuya, Francis; Ge, Xing-Yi; Yang, Xing-Lou; Wu, Li-Jun; Zohaib, Ali; Hu, Ben; Shi, Zheng-Li 2017 2017-04-06 COMM-USE N PMC6702250 28393313.0 10.1007/s12250-016-3930-2 uxzm5z3c 0.387815 Wang_2015 Fischer_2016, Lee_D_2019
139 Joffrin_2019 Bat coronavirus phylogeography in the Western Indian Ocean Léa Joffrin; Steven M. Goodman; David A. Wilkinson; Beza Ramasindrazana; Erwan Lagadec; Yann Gomard; Gildas Le Minter; Andréa Dos Santos; M. Corrie Schoeman; Rajendraprasad Sookhareea; Pablo Tortosa; Simon Julienne; Eduardo S. Gudo; Patrick Mavingui; Camille Lebarbenchon 2019 2019-09-04 BioRxiv N 10.1101/742866 by4qwkla 0.387711 Xu_L_2018, Tong_2009, Banyard_2013, Kosoy_2010 Ramírez_2014, Becker_2019, Asano_2016, Wray_2016
140 Sonntag_2009 New Adenovirus in Bats, Germany Sonntag, Michael; Mühldorfer, Kristin; Speck, Stephanie; Wibbelt, Gudrun; Kurth, Andreas 2009 2009-12-23 PMC N PMC3044533 19961700.0 10.3201/eid1512.090646 343l2ha7 0.387547 Xu_L_2018 Lee_D_2019, Ng_T_2013
141 Hu_T_2014 Characterization of a novel orthoreovirus isolated from fruit bat, China Hu, Tingsong; Qiu, Wei; He, Biao; Zhang, Yan; Yu, Jing; Liang, Xiu; Zhang, Wendong; Chen, Gang; Zhang, Yingguo; Wang, Yiyin; Zheng, Ying; Feng, Ziliang; Hu, Yonghe; Zhou, Weiguo; Tu, Changchun; Fan, Quanshui; Zhang, Fuqiang 2014 2014-11-30 COMM-USE N PMC4264558 25433675.0 10.1186/s12866-014-0293-4 1fw9ng2p 0.380722 Xu_L_2018, Wang_2015
142 Góes_2016 Genetic diversity of bats coronaviruses in the Atlantic Forest hotspot biome, Brazil Góes, Luiz Gustavo Bentim; Campos, Angélica Cristine de Almeida; Carvalho, Cristiano de; Ambar, Guilherme; Queiroz, Luzia Helena; Cruz-Neto, Ariovaldo Pereira; Munir, Muhammad; Durigon, Edison Luiz 2016 2016-10-31 PMC N PMC7106056 27473780.0 10.1016/j.meegid.2016.07.034 8tfbhmzo 0.377986 Tong_2009, Schountz_2013 Becker_2019, Ramírez_2014, Asano_2016, Lee_D_2019
143 Honkavuori_2014 Novel Coronavirus and Astrovirus in Delaware Bay Shorebirds Honkavuori, Kirsi S.; Briese, Thomas; Krauss, Scott; Sanchez, Maria D.; Jain, Komal; Hutchison, Stephen K.; Webster, Robert G.; Lipkin, W. Ian 2014 2014-04-03 COMM-USE N PMC3974748 24699424.0 10.1371/journal.pone.0093395 7gx4fowz 0.374948 Roberton_2006 Lee_D_2019
144 Ge_X_2016 Fugong virus, a novel hantavirus harbored by the small oriental vole (Eothenomys eleusis) in China Ge, Xing-Yi; Yang, Wei-Hong; Pan, Hong; Zhou, Ji-Hua; Han, Xi; Zhu, Guang-Jian; Desmond, James S.; Daszak, Peter; Shi, Zheng-Li; Zhang, Yun-Zhi 2016 2016-02-16 COMM-USE N PMC4754816 26880191.0 10.1186/s12985-016-0483-9 xbpko2bt 0.374399 Xu_L_2018 Wang_2019, Carvalho_de_Oliveira_2014, Lee_D_2019
145 Wang_2018 Detection of Neospora caninum DNA by polymerase chain reaction in bats from Southern China Wang, Xu; Li, Jianhua; Gong, Pengtao; Li, Xianhe; Zhang, Li; He, Biao; Xu, Lin; Yang, Zhengtao; Liu, Quan; Zhang, Xichen 2018 2018-08-31 PMC N PMC7108381 29581030.0 10.1016/j.parint.2018.03.002 3q2vv2sm 0.373742 Kosoy_2010, Xu_L_2018, Sonntag_2009 Lee_D_2019, Ramírez_2014
146 de_Sales_Lima_2015 Diverse gammacoronaviruses detected in wild birds from Madagascar de Sales Lima, Francisco Esmaile; Gil, Patricia; Pedrono, Miguel; Minet, Cécile; Kwiatek, Olivier; Campos, Fabrício Souza; Spilki, Fernando Rosado; Roehe, Paulo Michel; Franco, Ana Cláudia; Maminiaina, Olivier Fridolin; Albina, Emmanuel; de Almeida, Renata Servan 2015 2015-05-22 PMC N PMC7087566 10.1007/s10344-015-0931-7 cn3r6vhi 0.371125 Xu_L_2018, Tong_2009 Lee_D_2019
147 Li_W_2020 Virome diversity analysis reveals novel enteroviruses and a human picobirnavirus in stool samples from African green monkeys with diarrhea Li, Wenjuan; Qiang, Xin; Qin, Si; Huang, Yong; Hu, Yan; Bai, Bingke; Hou, Jun; Gao, Rong; Zhang, Xianglilan; Mi, Zhiqiang; Fan, Hang; Ye, Huahu; Tong, Yigang; Mao, Panyong 2020 2020-08-31 PMC N 32165243.0 10.1016/j.meegid.2020.104279 5q7wdamu 0.367189 Wang_2015, Wang_2018
148 Valitutto_2020 Detection of novel coronaviruses in bats in Myanmar Valitutto, Marc T.; Aung, Ohnmar; Tun, Kyaw Yan Naing; Vodzak, Megan E.; Zimmerman, Dawn; Yu, Jennifer H.; Win, Ye Tun; Maw, Min Thein; Thein, Wai Zin; Win, Htay Htay; Dhanota, Jasjeet; Ontiveros, Victoria; Smith, Brett; Tremeau-Brevard, Alexandre; Goldstein, Tracey; Johnson, Christine K.; Murray, Suzan; Mazet, Jonna 2020 2020-04-09 COMM-USE Y PMC7144984 32271768.0 10.1371/journal.pone.0230802 nro623aa 0.366873 Chua_2011, Epstein_2013
149 Straková_2017 Novel hantavirus identified in European bat species Nyctalus noctula Straková, Petra; Dufkova, Lucie; Širmarová, Jana; Salát, Jiří; Bartonička, Tomáš; Klempa, Boris; Pfaff, Florian; Höper, Dirk; Hoffmann, Bernd; Ulrich, Rainer G.; Růžek, Daniel 2017 2017-03-31 PMC N PMC7106157 28025098.0 10.1016/j.meegid.2016.12.025 on9ip087 0.364627 Wang_2015 Lee_D_2019, Góes_2016
150 Afelt_2018 Distribution of bat-borne viruses and environment patterns Afelt, Aneta; Lacroix, Audrey; Zawadzka-Pawlewska, Urszula; Pokojski, Wojciech; Buchy, Philippe; Frutos, Roger 2018 2018-03-31 PMC N PMC7106095 29277555.0 10.1016/j.meegid.2017.12.009 bedfwdyt 0.364086 Roberton_2006, Xu_L_2018, Tong_2009 Prada_2019, Gay_N_2014, Becker_2019, Turmelle_2010
151 Kudagammana_2018 Coronaviruses in guano from Pteropus medius bats in Peradeniya, Sri Lanka Kudagammana, H. D. W. S.; Thevanesam, V.; Chu, D. K. W.; Eriyagama, N. B.; Peiris, J. S. M.; Noordeen, F. 2018 2018-03-02 PMC N PMC7169738 29498228.0 10.1111/tbed.12851 yd1czvuo 0.362143 Xu_L_2018, Kosoy_2010, Ceballos_2013
152 Mendenhall_2019 Diversity and Evolution of Viral Pathogen Community in Cave Nectar Bats (Eonycteris spelaea) Mendenhall, Ian H; Wen, Dolyce Low Hong; Jayakumar, Jayanthi; Gunalan, Vithiagaran; Wang, Linfa; Mauer-Stroh, Sebastian; Su, Yvonne C.F.; Smith, Gavin J.D. 2019 2019-03-12 COMM-USE N PMC6466414 30871070.0 10.3390/v11030250 b4p81m35 0.361865 Xu_L_2018, Tong_2009, Wang_2015 Wray_2016, Lee_D_2019
153 Han_Y_2019 Identification of Diverse Bat Alphacoronaviruses and Betacoronaviruses in China Provides New Insights Into the Evolution and Origin of Coronavirus-Related Diseases Han, Yelin; Du, Jiang; Su, Haoxiang; Zhang, Junpeng; Zhu, Guangjian; Zhang, Shuyi; Wu, Zhiqiang; Jin, Qi 2019 2019-08-14 COMM-USE N PMC6702311 31474969.0 10.3389/fmicb.2019.01900 bojfc3q0 0.361212 Xu_L_2018, Tong_2009 Zhou_2018, Wang_2017
154 Zhuang_2015 Genomic Analysis and Surveillance of the Coronavirus Dominant in Ducks in China Zhuang, Qing-Ye; Wang, Kai-Cheng; Liu, Shuo; Hou, Guang-Yu; Jiang, Wen-Ming; Wang, Su-Chun; Li, Jin-Ping; Yu, Jian-Min; Chen, Ji-Ming 2015 2015-06-08 COMM-USE N PMC4459809 26053682.0 10.1371/journal.pone.0129256 qc5stoap 0.358987 Wang_2018, Wang_2015, Tong_2009, Xu_L_2018
155 Wang_2015 Discovery of novel virus sequences in an isolated and threatened bat species, the New Zealand lesser short-tailed bat (Mystacina tuberculata) Wang, Jing; Moore, Nicole E.; Murray, Zak L.; McInnes, Kate; White, Daniel J.; Tompkins, Daniel M.; Hall, Richard J. 2015 2015-08-23 COMM-USE N PMC4681071 25900137.0 10.1099/vir.0.000158 nq2ojfta 0.357599 Xu_L_2018, Tong_2009, Kosoy_2010, Banyard_2013, Wang_2015 Canuti_2011, Lin_J_2012, Lee_D_2019
156 Tan_Z_2019 Extensive genetic diversity of bat-borne polyomaviruses reveals inter-family host-switching events Zhizhou Tan; Gabriel Gonzalez; Jinliang Sheng; Jianmin Wu; Fuqiang Zhang; Lin Xu; Peisheng Zhang; Aiwei Zhu; Yonggang Qu; Changchun Tu; Michael J. Carr; Biao He 2019 2019-05-03 BioRxiv N 10.1101/627158 kcimb10m 0.356879 Xu_L_2018, Tong_2009, Banyard_2013, de_Sales_Lima_2015, Wang_2015 Mendenhall_2019, Canuti_2011, Wong_2019
157 Park_2012 Full genome analysis of a novel adenovirus from the South Polar skua (Catharacta maccormicki) in Antarctica Park, Yon Mi; Kim, Jeong-Hoon; Gu, Se Hun; Lee, Sook Young; Lee, Min-Goo; Kang, Yoon Kyoo; Kang, Sung-Ho; Kim, Hak Jun; Song, Jin-Won 2012 2012-01-05 PMC N PMC7111983 22078165.0 10.1016/j.virol.2011.10.008 osg8q89i 0.353777 Xu_L_2018, Sonntag_2009 Lee_D_2019
158 Woo_P_2018 Rapid detection of MERS coronavirus-like viruses in bats: potential for tracking MERS coronavirus transmission and animal origin Woo, Patrick C. Y.; Lau, Susanna K. P.; Chen, Yixin; Wong, Emily Y. M.; Chan, Kwok-Hung; Chen, Honglin; Zhang, Libiao; Xia, Ningshao; Yuen, Kwok-Yung 2018 2018-03-07 COMM-USE N PMC5841240 29511173.0 10.1038/s41426-017-0016-7 ehht4sff 0.353329 Sonntag_2009
159 Lau_S_2019 Novel Bat Alphacoronaviruses in Southern China Support Chinese Horseshoe Bats as an Important Reservoir for Potential Novel Coronaviruses Lau, Susanna K.P.; Wong, Antonio C.P.; Zhang, Libao; Luk, Hayes K.H.; Kwok, Jamie S. L.; Ahmed, Syed S.; Cai, Jian-Piao; Zhao, Pyrear S.H.; Teng, Jade L.L.; Tsui, Stephen K.W.; Yuen, Kwok-Yung; Woo, Patrick C. Y. 2019 2019-05-07 COMM-USE N PMC6563315 31067830.0 10.3390/v11050423 hzuo6pwx 0.348162 Xu_L_2018, Tong_2009, Sonntag_2009, Straková_2017 Woo_P_2006, Lee_D_2019, Canuti_2011, Wang_2017
160 Campos_2019 Bat Influenza A(HL18NL11) Virus in Fruit Bats, Brazil Campos, Angélica Cristine Almeida; Góes, Luiz Gustavo Bentim; Moreira-Soto, Andres; de Carvalho, Cristiano; Ambar, Guilherme; Sander, Anna-Lena; Fischer, Carlo; Ruckert da Rosa, Adriana; Cardoso de Oliveira, Debora; Kataoka, Ana Paula G.; Pedro, Wagner André; Martorelli, Luzia Fátima A.; Queiroz, Luzia Helena; Cruz-Neto, Ariovaldo P.; Durigon, Edison Luiz; Drexler, Jan Felix 2019 2019-02-23 PMC N PMC6346480 30666923.0 10.3201/eid2502.181246 svtdfeop 0.343360 Xu_L_2018, Roberton_2006 Wray_2016
161 Prada_2019 Viral Diversity of Microbats within the South West Botanical Province of Western Australia Prada, Diana; Boyd, Victoria; Baker, Michelle L.; O’Dea, Mark; Jackson, Bethany 2019 2019-12-13 COMM-USE N PMC6950384 31847282.0 10.3390/v11121157 84fwup69 0.341586 Gay_N_2014, Tong_2009, Schountz_2013, Luis_2015 Becker_2019, Gay_N_2014, Wray_2016
162 Hamilton_2012 Parasites reveal movement of bats between the New and Old Worlds Hamilton, Patrick B.; Cruickshank, Catriona; Stevens, Jamie R.; Teixeira, Marta M.G.; Mathews, Fiona 2012 2012-05-31 PMC N 22306822.0 10.1016/j.ympev.2012.01.007 mt9lt84e 0.338841 Banyard_2013, McCoy_2003, Xu_L_2018, Tong_2009
163 Kemenesi_2016 Sequencing and molecular modeling identifies candidate members of Caliciviridae family in bats Kemenesi, Gábor; Gellért, Ákos; Dallos, Bianka; Görföl, Tamás; Boldogh, Sándor; Estók, Péter; Marton, Szilvia; Oldal, Miklós; Martella, Vito; Bányai, Krisztián; Jakab, Ferenc 2016 2016-07-31 PMC N 27085289.0 10.1016/j.meegid.2016.04.004 leci3y54 0.337765 Wang_2015, Xu_L_2018
164 Memish_2013 Middle East Respiratory Syndrome Coronavirus in Bats, Saudi Arabia Memish, Ziad A.; Mishra, Nischay; Olival, Kevin J.; Fagbo, Shamsudeen F.; Kapoor, Vishal; Epstein, Jonathan H.; AlHakeem, Rafat; Durosinloun, Abdulkareem; Al Asmari, Mushabab; Islam, Ariful; Kapoor, Amit; Briese, Thomas; Daszak, Peter; Al Rabeeah, Abdullah A.; Lipkin, W. Ian 2013 2013-11-23 PMC N PMC3837665 24206838.0 10.3201/eid1911.131172 lgrpobia 0.336957
165 Austen_2015 High prevalence of Trypanosoma vegrandis in bats from Western Australia Austen, Jill M.; O'Dea, Mark; Jackson, Bethany; Ryan, Una 2015 2015-12-15 PMC N PMC7116909 26541211.0 10.1016/j.vetpar.2015.10.016 6kj0gc9i 0.336114 Kosoy_2010, Gay_N_2014 Ramírez_2014
166 Liu_P_2020 Are pangolins the intermediate host of the 2019 novel coronavirus (2019-nCoV) ? Ping Liu; Jing-Zhe Jiang; Xiu-Feng Wan; Yan Hua; Xiaohu Wang; Fanghui Hou; Jing Chen; Jiejian Zou; Jinping Chen 2020 2020-02-20 BioRxiv Y 10.1101/2020.02.18.954628 2inlyd0t 0.334970 Tong_2009, Xu_L_2018, Chu_D_2009 Lam_T_2020
167 Wu_Z_2018 Discovery of Diverse Rodent and Bat Pestiviruses With Distinct Genomic and Phylogenetic Characteristics in Several Chinese Provinces Wu, Zhiqiang; Liu, Bo; Du, Jiang; Zhang, Junpeng; Lu, Liang; Zhu, Guangjian; Han, Yelin; Su, Haoxiang; Yang, Li; Zhang, Shuyi; Liu, Qiyong; Jin, Qi 2018 2018-10-24 COMM-USE N PMC6207626 30405596.0 10.3389/fmicb.2018.02562 ilir895i 0.329902 Tong_2009, Wang_2015 Wu_Z_2018, Wray_2016
168 Hall_2014 New Alphacoronavirus in Mystacina tuberculata Bats, New Zealand Hall, Richard J.; Wang, Jing; Peacey, Matthew; Moore, Nicole E.; McInnes, Kate; Tompkins, Daniel M. 2014 2014-04-23 PMC N PMC3966383 24656060.0 10.3201/eid2004.131441 etw0dx1i 0.327306 Takekawa_2010, Kosoy_2010, Xu_L_2018 Lee_D_2019, Góes_2016, Canuti_2011, Ramírez_2014
169 Mélade_2016 An eco-epidemiological study of Morbilli-related paramyxovirus infection in Madagascar bats reveals host-switching as the dominant macro-evolutionary mechanism Mélade, Julien; Wieseke, Nicolas; Ramasindrazana, Beza; Flores, Olivier; Lagadec, Erwan; Gomard, Yann; Goodman, Steven M.; Dellagi, Koussay; Pascalis, Hervé 2016 2016-04-12 None N PMC4828640 27068130.0 10.1038/srep23752 7grni5hl 0.326398 Xu_L_2018, Tong_2009, de_Sales_Lima_2015, Gay_N_2014, Banyard_2013 Maganga_2014, Ramírez_2014, Becker_2019
170 Watanabe_2010 Epizootology and experimental infection of Yokose virus in bats Watanabe, Shumpei; Omatsu, Tsutomu; Miranda, Mary E.G.; Masangkay, Joseph S.; Ueda, Naoya; Endo, Maiko; Kato, Kentaro; Tohya, Yukinobu; Yoshikawa, Yasuhiro; Akashi, Hiroomi 2010 2010-01-31 PMC N PMC7112705 18789527.0 10.1016/j.cimid.2008.07.008 s1lvhknm 0.324978 Sonntag_2009
171 Tan_B_2016 Isolation and characterization of adenoviruses infecting endangered golden snub-nosed monkeys (Rhinopithecus roxellana) Tan, Bing; Wu, Li-Jun; Yang, Xing-Lou; Li, Bei; Zhang, Wei; Lei, Yong-Song; Li, Yong; Yang, Guo-Xiang; Chen, Jing; Chen, Guang; Wang, Han-Zhong; Shi, Zheng-Li 2016 2016-11-25 COMM-USE N PMC5123214 27884154.0 10.1186/s12985-016-0648-6 u9zpyy29 0.322758 Xu_L_2018, Wang_2015, Tong_2009 Maganga_2014, Lee_D_2019, Wray_2016
172 Tomazatos_2020 Letea Virus: Comparative Genomics and Phylogenetic Analysis of a Novel Reassortant Orbivirus Discovered in Grass Snakes (Natrix natrix) Tomazatos, Alexandru; Marschang, Rachel E.; Maranda, Iulia; Baum, Heike; Bialonski, Alexandra; Spînu, Marina; Lühken, Renke; Schmidt-Chanasit, Jonas; Cadar, Daniel 2020 2020-02-21 COMM-USE N PMC7077223 32098186.0 10.3390/v12020243 ezuyjcxs 0.322493 Wang_2018, Wang_2015, Xu_L_2018 Maganga_2014, Wu_Z_2018
173 Onyuok_2019 Molecular Detection and Genetic Characterization of Novel RNA Viruses in Wild and Synanthropic Rodents and Shrews in Kenya Onyuok, Samson Omondi; Hu, Ben; Li, Bei; Fan, Yi; Kering, Kelvin; Ochola, Griphin Ochieng; Zheng, Xiao-Shuang; Obanda, Vincent; Ommeh, Sheila; Yang, Xing-Lou; Agwanda, Bernard; Shi, Zheng-Li 2019 2019-11-21 COMM-USE N PMC6881279 31824465.0 10.3389/fmicb.2019.02696 xtwov958 0.318589 Wang_2015, Tong_2009 Wu_Z_2018
174 Yadav_2016 Isolation of Tioman virus from Pteropus giganteus bat in North-East region of India Yadav, Pragya; Sarkale, Prasad; Patil, Deepak; Shete, Anita; Kokate, Prasad; Kumar, Vimal; Jain, Rajlaxmi; Jadhav, Santosh; Basu, Atanu; Pawar, Shailesh; Sudeep, Anakkathil; Gokhale, Mangesh; Lakra, Rajen; Mourya, Devendra 2016 2016-11-30 PMC N PMC7106170 27619056.0 10.1016/j.meegid.2016.09.010 gk6n8slx 0.317968 Doysabas_2019
175 Paim_2019 Epidemiology of Deltacoronaviruses (δ-CoV) and Gammacoronaviruses (γ-CoV) in Wild Birds in the United States Paim, Francine C.; Bowman, Andrew S.; Miller, Lauren; Feehan, Brandi J.; Marthaler, Douglas; Saif, Linda J.; Vlasova, Anastasia N. 2019 2019-09-26 COMM-USE N PMC6832366 31561462.0 10.3390/v11100897 7ubs3q6p 0.316161 de_Sales_Lima_2015 Asano_2016
176 Ceballos_2013 Novel Lyssavirus in Bat, Spain Ceballos, Nidia Aréchiga; Morón, Sonia Vázquez; Berciano, José M.; Nicolás, Olga; López, Carolina Aznar; Juste, Javier; Nevado, Cristina Rodríguez; Setién, Álvaro Aguilar; Echevarría, Juan E. 2013 2013-05-23 PMC N PMC3647500 23648051.0 10.3201/eid1905.121071 6ebl319q 0.311093 Xu_L_2018, Sonntag_2009, Kosoy_2010 Freuling_2011, Hall_2014
177 Drexler_2014 Ecology, evolution and classification of bat coronaviruses in the aftermath of SARS Drexler, Jan Felix; Corman, Victor Max; Drosten, Christian 2014 2014-01-31 PMC Y PMC7113851 24184128.0 10.1016/j.antiviral.2013.10.013 sxbmd0df 0.309141 Wang_2015, Tong_2009, Xu_L_2018
178 Drexler_2013 Evidence for Novel Hepaciviruses in Rodents Drexler, Jan Felix; Corman, Victor Max; Müller, Marcel Alexander; Lukashev, Alexander N.; Gmyl, Anatoly; Coutard, Bruno; Adam, Alexander; Ritz, Daniel; Leijten, Lonneke M.; van Riel, Debby; Kallies, Rene; Klose, Stefan M.; Gloza-Rausch, Florian; Binger, Tabea; Annan, Augustina; Adu-Sarkodie, Yaw; Oppong, Samuel; Bourgarel, Mathieu; Rupp, Daniel; Hoffmann, Bernd; Schlegel, Mathias; Kümmerer, Beate M.; Krüger, Detlev H.; Schmidt-Chanasit, Jonas; Setién, Alvaro Aguilar; Cottontail, Veronika M.; Hemachudha, Thiravat; Wacharapluesadee, Supaporn; Osterrieder, Klaus; Bartenschlager, Ralf; Matthee, Sonja; Beer, Martin; Kuiken, Thijs; Reusken, Chantal; Leroy, Eric M.; Ulrich, Rainer G.; Drosten, Christian 2013 2013-06-20 COMM-USE N PMC3688547 23818848.0 10.1371/journal.ppat.1003438 1v353uij 0.308445 Xu_L_2018, Wang_2015
179 Muradrasoli_2010 Prevalence and Phylogeny of Coronaviruses in Wild Birds from the Bering Strait Area (Beringia) Muradrasoli, Shaman; Bálint, Ádám; Wahlgren, John; Waldenström, Jonas; Belák, Sándor; Blomberg, Jonas; Olsen, Björn 2010 2010-10-29 COMM-USE Y PMC2966397 21060827.0 10.1371/journal.pone.0013640 9le7uk7m 0.307715 Wang_2015, Weaver_2004 Amer_2018, Barbosa_2019
180 Seimon_2015 Adenovirus and Herpesvirus Diversity in Free-Ranging Great Apes in the Sangha Region of the Republic of Congo Seimon, Tracie A.; Olson, Sarah H.; Lee, Kerry Jo; Rosen, Gail; Ondzie, Alain; Cameron, Kenneth; Reed, Patricia; Anthony, Simon J.; Joly, Damien O.; McAloose, Denise; Lipkin, W. Ian 2015 2015-03-17 COMM-USE N PMC4362762 25781992.0 10.1371/journal.pone.0118543 nb6or0jz 0.305494 Wang_2015 Maganga_2014, Lee_D_2019
181 Ramírez_2014 Trypanosome species in neo-tropical bats: Biological, evolutionary and epidemiological implications Ramírez, Juan David; Tapia-Calle, Gabriela; Muñoz-Cruz, Geissler; Poveda, Cristina; Rendón, Lina M.; Hincapié, Eduwin; Guhl, Felipe 2014 2014-03-31 PMC N PMC7106241 23831017.0 10.1016/j.meegid.2013.06.022 c8z844h5 0.300414 Kosoy_2010, Xu_L_2018, Tong_2009 Becker_2019, Wray_2016, Colombi_2019