Topic 08 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 11 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Grubb_2001 Cystatin C-Properties and use as diagnostic marker Grubb, Anders O. 2001 2001-12-31 PMC N PMC7130541 11040958.0 10.1016/s0065-2423(01)35015-1 q72zp2o4 0.768663 Ivarsson_2012 Zi_M_2018, Shamsi_2017, Magister_2012, Pemberton_2006
2 Mentlein_2004 Cell-Surface Peptidases∗ ∗ Dedicated to Professor Dr. Eberhard Heymann on the occasion of his 65th birthday. Mentlein, Rolf 2004 2004-12-31 PMC N PMC7126636 15219783.0 10.1016/s0074-7696(04)35004-7 7h7h1c07 0.617235 Ivarsson_2012, Donnelly_2011, Rytkönen_2007, Jang_2019
3 Bontemps_2006 Potential opportunity in the development of new therapeutic agents based on endogenous and exogenous inhibitors of the proprotein convertases Bontemps, Yannick; Scamuffa, Nathalie; Calvo, Fabien; Khatib, Abdel‐Majid 2006 2006-10-03 PMC N PMC7168524 17019676.0 10.1002/med.20072 tnaimz3c 0.605440 Levine_2015, Singha_2015, Yong_2001, Rytkönen_2007
4 Zhong_2015 Dipeptidyl Peptidase-4 Regulation of SDF-1/CXCR4 Axis: Implications for Cardiovascular Disease Zhong, Jixin; Rajagopalan, Sanjay 2015 2015-09-25 COMM-USE N PMC4585326 26441982.0 10.3389/fimmu.2015.00477 0nqmjdek 0.603892 Ivarsson_2012
5 Turner_2010 Metalloproteases and Proteolytic Processing Turner, Anthony J.; Nalivaeva, Natalia N. 2010 2010-09-01 PMC N PMC7120770 10.1007/978-1-4419-6382-6_19 vbu1le29 0.553822 Rytkönen_2007, Donnelly_2011, Levine_2015 Turner_2007, Edwards_2008
6 Antalis_2010 The Cutting Edge: Membrane Anchored Serine Protease Activities in the Pericellular Microenvironment Antalis, Toni M.; Buzza, Marguerite S.; Hodge, Kathryn M.; Hooper, John D.; Netzel-Arnett, Sarah 2010 2010-05-27 PMC N PMC3680374 20507279.0 10.1042/bj20100046 318vtzk0 0.549477 Donnelly_2011, Ivarsson_2012 Edwards_2008, Antalis_2016
7 Jarocki_2015 Non‐proteolytic functions of microbial proteases increase pathological complexity Jarocki, Veronica M.; Tacchi, Jessica L.; Djordjevic, Steven P. 2015 2015-02-06 PMC N PMC7167786 25492846.0 10.1002/pmic.201400386 85x23sxe 0.548209 Donnelly_2011, Lester_2014
8 Turner_2007 New Insights into the Roles of Metalloproteinases in Neurodegeneration and Neuroprotection Turner, A.J.; Nalivaeva, N.N. 2007 2007-12-31 PMC N PMC7112344 17678958.0 10.1016/s0074-7742(07)82006-x 6ove5qhu 0.533331 Donnelly_2011, Jang_2019, Rytkönen_2007, Levine_2015 Turner_2010, Edwards_2008
9 Porsch_2016 Pathogenesis of Kingella kingae Disease Porsch, Eric A.; Rempe, Katherine A. 2016 2016-08-27 PMC N PMC7123807 10.1007/978-3-319-43729-3_3 9iv2qxvr 0.501368 Lester_2014 Bernard_2014
10 Daigo_2012 Host-protective effect of circulating pentraxin 3 (PTX3) and complex formation with neutrophil extracellular traps Daigo, Kenji; Hamakubo, Takao 2012 2012-12-13 COMM-USE N PMC3521240 23248627.0 10.3389/fimmu.2012.00378 qg1b5p1j 0.500824 Lester_2014, Alcami_2016, Jang_2019, Colegio_2011 Balhara_2013, Drago-Serrano_2017
11 Phillipson_2011 The neutrophil in vascular inflammation Phillipson, Mia; Kubes, Paul 2011 2011-11-07 PMC N PMC7095830 22064428.0 10.1038/nm.2514 t3041bid 0.490301 Lester_2014, Jang_2019, Hertzog_2011 Tecchio_2016, van_Rees_2016
12 Ghosh_2020 The role of lipocalin-2 in age-related macular degeneration (AMD) Ghosh, Sayan; Stepicheva, Nadezda; Yazdankhah, Meysam; Shang, Peng; Watson, Alan M.; Hose, Stacey; Liu, Haitao; Weiss, Joseph; Zigler, J. Samuel; Valapala, Mallika; Watkins, Simon C.; Sinha, Debasish 2020 2020-01-04 PMC N PMC7079812 31901947.0 10.1007/s00018-019-03423-8 os6j6vbn 0.489849 Jang_2019, Colegio_2011, Raivich_2005 Camelo_2014, Zi_M_2018
13 Xu_J_2016 A Disintegrin and Metalloprotease 17 in the Cardiovascular and Central Nervous Systems Xu, Jiaxi; Mukerjee, Snigdha; Silva-Alves, Cristiane R. A.; Carvalho-Galvão, Alynne; Cruz, Josiane C.; Balarini, Camille M.; Braga, Valdir A.; Lazartigues, Eric; França-Silva, Maria S. 2016 2016-10-18 COMM-USE N PMC5067531 27803674.0 10.3389/fphys.2016.00469 b58irdd8 0.481791 Rytkönen_2007, Jang_2019, Ivarsson_2012, Donnelly_2011 Edwards_2008, Scholzen_2009
14 Patel_2018 Cathepsins: Proteases that are vital for survival but can also be fatal Patel, Seema; Homaei, Ahmad; El-Seedi, Hesham R.; Akhtar, Nadeem 2018 2018-09-30 PMC N 29885636.0 10.1016/j.biopha.2018.05.148 a053lnte 0.446745 Donnelly_2011, Rytkönen_2007, Jang_2019
15 Magrini_2016 The Dual Complexity of PTX3 in Health and Disease: A Balancing Act? Magrini, Elena; Mantovani, Alberto; Garlanda, Cecilia 2016 2016-06-30 PMC N PMC5414840 27179743.0 10.1016/j.molmed.2016.04.007 z6ckhkgg 0.444605 Lester_2014, Jang_2019, Cui_B_2019 Drago-Serrano_2017, Balhara_2013, Galzi_2010, Zi_M_2018
16 Perez_2019 Acute phase protein response to viral infection and vaccination Perez, Luis 2019 2019-08-15 PMC N PMC7094616 31323216.0 10.1016/j.abb.2019.07.013 jdjoxkwg 0.441197
17 Daigo_2014 The yin-yang of long pentraxin PTX3 in inflammation and immunity Daigo, Kenji; Mantovani, Alberto; Bottazzi, Barbara 2014 2014-09-30 PMC N PMC7112810 24792672.0 10.1016/j.imlet.2014.04.012 ygj6831p 0.439240 Ivarsson_2012, Alcami_2016 Balhara_2013, Daigo_2012, Inforzato_2013, Drago-Serrano_2017
18 Hu_J_2014 THE DUALITY OF FGL2 - SECRETED IMMUNE CHECKPOINT REGULATOR VERSUS MEMBRANE-ASSOCIATED PROCOAGULANT: THERAPEUTIC POTENTIAL AND IMPLICATIONS Hu, Jiemiao; Yan, Jun; Rao, Ganesh; Latha, Khatri; Overwijk, Willem W.; Heimberger, Amy B; Li, Shulin 2014 2014-09-26 PMC N PMC5257246 25259408.0 10.3109/08830185.2014.956360 l6ktj5yd 0.438547 Ozdemir_2006, Zhang_2014 Yurchenko_2010
19 Ciancarella_2018 Role of a fluid-phase PRR in fighting an intracellular pathogen: PTX3 in Shigella infection Ciancarella, Valeria; Lembo-Fazio, Luigi; Paciello, Ida; Bruno, Anna-Karin; Jaillon, Sébastien; Berardi, Sara; Barbagallo, Marialuisa; Meron-Sudai, Shiri; Cohen, Dani; Molinaro, Antonio; Rossi, Giacomo; Garlanda, Cecilia; Bernardini, Maria Lina 2018 2018-12-07 COMM-USE N PMC6317801 30532257.0 10.1371/journal.ppat.1007469 nlfejnmk 0.436830 Yamazaki_2013, Lester_2014 Drago-Serrano_2017
20 Macours_2004 Structure, Evolutionary Conservation, and Functions of Angiotensin- and Endothelin-Converting Enzymes Macours, Nathalie; Poels, Jeroen; Hens, Korneel; Francis, Carmen; Huybrechts, Roger 2004 2004-12-31 PMC N PMC7126198 15464852.0 10.1016/s0074-7696(04)39002-9 bu7j7kdr 0.426481 Rytkönen_2007
21 Fugère_2005 Cutting back on pro-protein convertases: the latest approaches to pharmacological inhibition Fugère, Martin; Day, Robert 2005 2005-06-30 PMC N PMC7119077 15925704.0 10.1016/j.tips.2005.04.006 kyb3yf4v 0.421793 Ivarsson_2012, Rytkönen_2007
22 Magister_2012 Cystatins in Immune System Magister, Špela; Kos, Janko 2012 2012-12-20 NONCOMM N PMC3564246 23386904.0 10.7150/jca.5044 bnld9o72 0.421502 Donnelly_2011 Zi_M_2018, Pemberton_2006
23 Dijkgraaf_2013 Synthesis and application of cNGR-containing imaging agents for detection of angiogenesis Dijkgraaf, Ingrid; Van de Vijver, Pieter; Dirksen, Anouk; Hackeng, Tilman M. 2013 2013-06-15 PMC N PMC7125914 23643902.0 10.1016/j.bmc.2013.04.002 xpl2kkld 0.417106 Ozdemir_2006, Singha_2015, Jang_2019
24 Shahiduzzaman_2012 Activity based protein profiling to detect serine hydrolase alterations in virus infected cells Shahiduzzaman, Md.; Coombs, Kevin M. 2012 2012-08-22 COMM-USE N PMC3441198 23024641.0 10.3389/fmicb.2012.00308 wnk44cf7 0.414313 Vigerust_2011
25 Honke_2016 Multiple functions of USP18 Honke, Nadine; Shaabani, Namir; Zhang, Dong-Er; Hardt, Cornelia; Lang, Karl S 2016 2016-11-03 PMC N PMC5260889 27809302.0 10.1038/cddis.2016.326 4aeu9n5v 0.405089
26 Patel_2017 A critical review on serine protease: Key immune manipulator and pathology mediator Patel, S. 2017 2017-12-31 PMC N PMC7126602 28236540.0 10.1016/j.aller.2016.10.011 yexefg55 0.392927 Donnelly_2011, Rytkönen_2007, Braun_2019 Drago-Serrano_2017, Zi_M_2018
27 Edwards_2008 The ADAM metalloproteinases Edwards, Dylan R.; Handsley, Madeleine M.; Pennington, Caroline J. 2008 2008-10-31 PMC N PMC7112278 18762209.0 10.1016/j.mam.2008.08.001 9wq0gncz 0.388333 Ivarsson_2012, Levine_2015 Yurchenko_2010
28 Bogenrieder_2002 Cell-surface proteolysis, growth factor activation and intercellular communication in the progression of melanoma Bogenrieder, Thomas; Herlyn, Meenhard 2002 2002-10-31 PMC N PMC7129480 12398996.0 10.1016/s1040-8428(01)00196-2 988j5edl 0.383029 Bernardini_2012, Geijtenbeek_2009, Jang_2019, Donnelly_2011
29 Pemberton_2006 PROTEINASE INHIBITORS | Cystatins Pemberton, P.A. 2006 2006-12-31 PMC N PMC7148743 10.1016/b0-12-370879-6/00329-x 8omx6saf 0.382841 Donnelly_2011 Magister_2012, Zi_M_2018
30 Zi_M_2018 Involvement of cystatin C in immunity and apoptosis Zi, Mengting; Xu, Yuekang 2018 2018-04-30 PMC N PMC7112947 29355583.0 10.1016/j.imlet.2018.01.006 1rpzbadj 0.382023 Jang_2019, Postigo_2009 Magister_2012, Shamsi_2017
31 McAninch_2017 Mechanistic Insight into Long Noncoding RNAs and the Placenta McAninch, Dale; Roberts, Claire T.; Bianco-Miotto, Tina 2017 2017-06-27 COMM-USE N PMC5535864 28653993.0 10.3390/ijms18071371 p1ehc0f0 0.369587 Lamsisi_2020
32 Fu_Y_2015 Small Non-coding Transfer RNA-Derived RNA Fragments (tRFs): Their Biogenesis, Function and Implication in Human Diseases Fu, Yu; Lee, Inhan; Lee, Yong Sun; Bao, Xiaoyong 2015 2015-12-31 NONCOMM N PMC4742329 26865839.0 10.5808/gi.2015.13.4.94 0b08jyjs 0.364042
33 Endres_2020 Amyloidogenic Peptides in Human Neuro-Degenerative Diseases and in Microorganisms: A Sorrow Shared Is a Sorrow Halved? Endres, Kristina 2020 2020-02-19 COMM-USE N PMC7070710 32093040.0 10.3390/molecules25040925 7h828tvv 0.360610 Drago-Serrano_2017
34 Antalis_2016 Extracellular: Plasma Membrane Proteases – Serine Proteases Antalis, T.M.; Buzza, M.S. 2016 2016-12-31 PMC N PMC7149991 10.1016/b978-0-12-394447-4.10076-8 2yk6njtb 0.353642 Ivarsson_2012 Antalis_2010
35 Philp_2013 SGTA: A New Player in the Molecular Co-Chaperone Game Philp, Lisa K.; Butler, Miriam S.; Hickey, Theresa E.; Butler, Lisa M.; Tilley, Wayne D.; Day, Tanya K. 2013 2013-07-02 PMC N PMC7091355 23818240.0 10.1007/s12672-013-0151-0 4hoj029s 0.343133 Rytkönen_2007
36 Doni_2016 Innate Immunity, Hemostasis and Matrix Remodeling: PTX3 as a Link Doni, Andrea; Garlanda, Cecilia; Mantovani, Alberto 2016 2016-12-01 PMC N PMC5414833 27881292.0 10.1016/j.smim.2016.10.012 1d4u53ot 0.338114 Lester_2014, Doni_2019, Doni_2017 Doni_2017, Drago-Serrano_2017, Balhara_2013
37 Müller_2012 Specific functions of lysosomal proteases in endocytic and autophagic pathways Müller, Sabrina; Dennemärker, Julia; Reinheckel, Thomas 2012 2012-01-31 PMC N PMC7105187 21767668.0 10.1016/j.bbapap.2011.07.003 eqv6a7tj 0.334692 Jang_2019, Choi_2020 Schmid_2007
38 Bauvois_2005 Aminopeptidase‐N/CD13 (EC 3.4.11.2) inhibitors: Chemistry, biological evaluations, and therapeutic prospects Bauvois, Brigitte; Dauzonne, Daniel 2005 2005-10-07 PMC N PMC7168514 16216010.0 10.1002/med.20044 mdes28jg 0.331055 Bernardini_2012, Jang_2019, Singha_2015
39 Braun_2019 Furin‐mediated protein processing in infectious diseases and cancer Braun, Elisabeth; Sauter, Daniel 2019 2019-08-05 NONCOMM N PMC6682551 31406574.0 10.1002/cti2.1073 k3m72uxw 0.330984 Rytkönen_2007 Vigerust_2011
40 Shamsi_2017 Journey of cystatins from being mere thiol protease inhibitors to at heart of many pathological conditions Shamsi, Anas; Bano, Bilqees 2017 2017-09-30 PMC N PMC7112400 28445699.0 10.1016/j.ijbiomac.2017.04.071 uh0ftuqv 0.328228 Rytkönen_2007, Jang_2019 Zi_M_2018, Pemberton_2006
41 Scholzen_2009 The Role of Neuropeptide Endopeptidases in Cutaneous Immunity Scholzen, T. E. 2009 2009-01-01 PMC N PMC7120023 10.1007/978-3-540-35989-0_8 hpwt3n7b 0.325419 Jang_2019, Donnelly_2011, Lester_2014, Geijtenbeek_2009 Zi_M_2018, Drago-Serrano_2017
42 Donnelly_2011 How Pathogen-Derived Cysteine Proteases Modulate Host Immune Responses Donnelly, Sheila; Dalton, John P.; Robinson, Mark W. 2011 2011-05-19 PMC N PMC7123607 21660666.0 10.1007/978-1-4419-8414-2_12 ae07ljtz 0.318339 Lester_2014, Jang_2019 Kopitar-Jerala_2012
43 Doni_2019 The Long Pentraxin PTX3 as a Link Between Innate Immunity, Tissue Remodeling, and Cancer Doni, Andrea; Stravalaci, Matteo; Inforzato, Antonio; Magrini, Elena; Mantovani, Alberto; Garlanda, Cecilia; Bottazzi, Barbara 2019 2019-04-04 COMM-USE N PMC6459138 31019517.0 10.3389/fimmu.2019.00712 q5ogi4o7 0.316342 Lester_2014, Anand_2019, Doni_2017 Balhara_2013, Drago-Serrano_2017, Inforzato_2013
44 Balhara_2013 Pentraxin 3: An Immuno-Regulator in the Lungs Balhara, Jyoti; Koussih, Latifa; Zhang, Jingbo; Gounni, Abdelilah Soussi 2013 2013-05-31 COMM-USE N PMC3668324 23755050.0 10.3389/fimmu.2013.00127 lvyl76dt 0.311028 Lester_2014, Jang_2019, Cui_B_2019 Drago-Serrano_2017, Daigo_2012
45 Vigerust_2011 Protein glycosylation in infectious disease pathobiology and treatment Vigerust, David J. 2011 2011-08-10 PMC N PMC7088636 10.2478/s11535-011-0050-8 lpbma80s 0.304059 Lester_2014