Topic 04 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 62 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Barnard_2019 Expression of 9-O- and 7,9-O-Acetyl Modified Sialic Acid in Cells and Their Effects on Influenza Viruses Barnard, Karen N.; Wasik, Brian R.; LaClair, Justin R.; Buchholz, David W.; Weichert, Wendy S.; Alford-Lawrence, Brynn K.; Aguilar, Hector C.; Parrish, Colin R. 2019 2019-12-03 COMM-USE N PMC6890989 31796537.0 10.1128/mbio.02490-19 11ejfiwe 0.993520 Barnard_2019, Barnard_2019, Strasser_2003, Langereis_2015
2 Barnard_2019 Expression of 9-O- and 7,9-O-acetyl modified sialic acid in cells and their effects on influenza viruses Karen N. Barnard; Brian R. Wasik; Justin R. LaClair; Wendy S. Weichert; Brynn K. Lawrence; Colin R. Parrish 2019 2019-05-25 BioRxiv N 10.1101/650341 edslp6l5 0.961159 Barnard_2019, Barnard_2019, Strasser_2003, Langereis_2015
3 Mandal_2012 Functions and Biosynthesis of O-Acetylated Sialic Acids Mandal, Chitra; Schwartz-Albiez, Reinhard; Vlasak, Reinhard 2012 2012-02-28 PMC N PMC7120186 22371169.0 10.1007/128_2011_310 4r9e6ijp 0.947817 Schmidt_1982 Baumann_2015, Park_2019, Langereis_2015
4 Barnard_2019 The effects of modified sialic acids on mucus and erythrocytes on influenza A virus HA and NA functions Karen N. Barnard; Brynn K. Alford-Lawrence; David W. Buchholz; Brian R. Wasik; Justin R. LaClair; Hai Yu; Rebekah Honce; Stefan Ruhl; Petar Pajic; Erin K. Daugherity; Xi Chen; Stacey L. Schultz-Cherry; Hector C. Aguilar; Ajit Varki; Colin R. Parrish 2019 2019-10-10 BioRxiv N 10.1101/800300 mgdqixt0 0.805955 Kim_D_2016, Wasik_2017
5 Ghosh_2020 Chapter 1 Sialic acid and biology of life: An introduction Ghosh, Shyamasree 2020 2020-12-31 PMC N PMC7153325 10.1016/b978-0-12-816126-5.00001-9 795fx62w 0.794752 Schmidt_1982 Schauer_2018, Langereis_2015
6 Baumann_2015 9-O-Acetylation of sialic acids is catalysed by CASD1 via a covalent acetyl-enzyme intermediate Baumann, Anna-Maria T.; Bakkers, Mark J. G.; Buettner, Falk F. R.; Hartmann, Maike; Grove, Melanie; Langereis, Martijn A.; de Groot, Raoul J.; Mühlenhoff, Martina 2015 2015-07-14 None N PMC4510713 26169044.0 10.1038/ncomms8673 tlndy4aq 0.780863 Schmidt_1982 Park_2019, Arming_2010, Rauvolfova_2008, Mahajan_2018
7 Wasik_2017 Distribution of O-Acetylated Sialic Acids among Target Host Tissues for Influenza Virus Wasik, Brian R.; Barnard, Karen N.; Ossiboff, Robert J.; Khedri, Zahra; Feng, Kurtis H.; Yu, Hai; Chen, Xi; Perez, Daniel R.; Varki, Ajit; Parrish, Colin R. 2017 2017-09-06 COMM-USE N PMC5588038 28904995.0 10.1128/msphere.00379-16 n0r4ka6h 0.772142 Strasser_2003, Langereis_2015, Barnard_2019, Park_2019
8 Varki_2012 Multifarious roles of sialic acids in immunity Varki, Ajit; Gagneux, Pascal 2012 2012-04-01 PMC N PMC3357316 22524423.0 10.1111/j.1749-6632.2012.06517.x 7zax1bku 0.757272 Schmidt_1982 Langereis_2015, Schauer_2018
9 Kitajima_2015 Advanced Technologies in Sialic Acid and Sialoglycoconjugate Analysis Kitajima, Ken; Varki, Nissi; Sato, Chihiro 2015 2015-05-28 PMC N PMC7122537 26017094.0 10.1007/128_2013_458 5ujiscdt 0.738579 Schmidt_1982, Bhide_2016, Hayakawa_2011 Langereis_2015, Schauer_2018, Kim_D_2016
10 Hayakawa_2011 Human-Specific Changes in Sialic Acid Biology Hayakawa, Toshiyuki; Varki, Ajit 2011 2011-10-01 PMC N PMC7120309 10.1007/978-4-431-54011-3_8 zdg9q14x 0.737978 Langereis_2015, Schauer_2018, Ghosh_2020
11 Varki_2008 Multiple changes in sialic acid biology during human evolution Varki, Ajit 2008 2008-09-07 PMC N PMC7087641 18777136.0 10.1007/s10719-008-9183-z 1awyfzjr 0.731599 Ghosh_2020
12 Varki_2002 Loss of N‐glycolylneuraminic acid in humans: Mechanisms, consequences, and implications for hominid evolution Varki, Ajit 2002 2002-01-04 PMC N PMC7159735 11786991.0 10.1002/ajpa.10018 wanbz1et 0.726208
13 Peri_2017 Phylogenetic Distribution of CMP-Neu5Ac Hydroxylase (CMAH), the Enzyme Synthetizing the Proinflammatory Human Xenoantigen Neu5Gc Peri, Sateesh; Kulkarni, Asmita; Feyertag, Felix; Berninsone, Patricia M; Alvarez-Ponce, David 2017 2017-12-30 NONCOMM N PMC5767959 29206915.0 10.1093/gbe/evx251 k596omcy 0.718700 Kim_D_2016
14 Schauer_2018 Chapter One Exploration of the Sialic Acid World Schauer, Roland; Kamerling, Johannis P. 2018 2018-12-31 PMC N PMC7112061 30509400.0 10.1016/bs.accb.2018.09.001 rrzr5ycl 0.702137 Schmidt_1982 Langereis_2015, Ghosh_2020
15 Klotz_1992 Binding of Plasmodium falciparum 175-kilodalton erythrocyte binding antigen and invasion of murine erythrocytes requires N-acetylneuraminic acid but not its O-acetylated form Klotz, Francis W.; Orlandi, Palmer A.; Reuter, Gerd; Cohen, Stuart J.; Haynes, J.David; Schauer, Roland; Howard, Russell J.; Palese, Peter; Miller, Louis H. 1992 1992-03-31 PMC N 1565137.0 10.1016/0166-6851(92)90199-t eo4xbk0y 0.681036 Schmidt_1982
16 Aamelfot_2014 The in situ distribution of glycoprotein-bound 4-O-Acetylated sialic acids in vertebrates Aamelfot, Maria; Dale, Ole Bendik; Weli, Simon Chioma; Koppang, Erling Olaf; Falk, Knut 2014 2014-05-16 PMC N PMC7088174 24833039.0 10.1007/s10719-014-9529-7 9t3xoscs 0.675499 Langereis_2015, Park_2019, Schauer_2018
17 Park_2019 Post-Glycosylation Modification of Sialic Acid and Its Role in Virus Pathogenesis Park, Simon S. 2019 2019-11-01 COMM-USE N PMC6963189 31683930.0 10.3390/vaccines7040171 i8g9y5qm 0.670626 Schmidt_1982 Baumann_2015, Strasser_2003, Langereis_2015, Niemann_1982
18 Malykh_2003 Regulation of N-glycolylneuraminic acid biosynthesis in developing pig small intestine. Malykh, Yanina N; King, Timothy P; Logan, Elizabeth; Kelly, Denise; Schauer, Roland; Shaw, Lee 2003 2003-03-01 PMC N PMC1223197 12444926.0 10.1042/bj20021049 xv6j68wv 0.662400
19 İzzetoğlu_2014 Determination of sialic acids in immune system cells (coelomocytes) of sea urchin, Paracentrotus lividus, using capillary LC-ESI-MS/MS İzzetoğlu, Savaş; Şahar, Umut; Şener, Ecem; Deveci, Remziye 2014 2014-01-31 PMC N 24215912.0 10.1016/j.fsi.2013.10.029 ltokl300 0.647242 Schmidt_1982, Schlesinger_1983, Varki_2012, Schmidt_1982 Ceciliani_2004, Kim_D_2016
20 Kumlin_2008 Sialic acid tissue distribution and influenza virus tropism Kumlin, Urban; Olofsson, Sigvard; Dimock, Ken; Arnberg, Niklas 2008 2008-08-08 PMC N PMC4941897 19453419.0 10.1111/j.1750-2659.2008.00051.x ecie0dls 0.630425 Matrosovich_2013
21 Khedri_2016 A Chemical Biology Solution to Problems with Studying Biologically Important but Unstable 9-O-Acetyl Sialic Acids Khedri, Zahra; Xiao, An; Yu, Hai; Landig, Corinna Susanne; Li, Wanqing; Diaz, Sandra; Wasik, Brian R.; Parrish, Colin R.; Wang, Lee-Ping; Varki, Ajit; Chen, Xi 2016 2016-12-12 PMC N PMC5704959 27936566.0 10.1021/acschembio.6b00928 lsxk7gtk 0.622478 Baumann_2015, Langereis_2015, Park_2019
22 Muñoz-Barroso_1992 Increased influenza A virus sialidase activity with N-acetyl-9-O-acetylneuraminic acid-containing substrates resulting from influenza C virus O-acetylesterase action Muñoz-Barroso, I.; García-Sastre, A.; Villar, E.; Manuguerra, J.-C.; Hannoun, C.; Cabezas, J.A. 1992 1992-09-01 PMC N 1413991.0 10.1016/0168-1702(92)90106-j u67cuap0 0.584053
23 Mahajan_2019 Alterations in sialic-acid O-acetylation glycoforms during murine erythrocyte development Mahajan, Vinay S; Alsufyani, Faisal; Mattoo, Hamid; Rosenberg, Ian; Pillai, Shiv 2019 2019-01-07 PMC N PMC6381321 30597004.0 10.1093/glycob/cwy110 zsp5v8hv 0.579188 Mahajan_2018, Baumann_2015, Strasser_2003
24 Rauvolfova_2008 Chemo-enzymatic synthesis of C-9 acetylated sialosides Rauvolfova, Jana; Venot, Andre; Boons, Geert-Jan 2008 2008-07-21 PMC N 18508039.0 10.1016/j.carres.2008.05.002 24um8t1y 0.572663 Schmidt_1982
25 Rinninger_2006 Localisation and distribution of O-acetylated N-acetylneuraminic acids, the endogenous substrates of the hemagglutinin-esterases of murine coronaviruses, in mouse tissue Rinninger, Andreas; Richet, Colette; Pons, Alexandre; Kohla, Guido; Schauer, Roland; Bauer, Hans-Christian; Zanetta, Jean-Pierre; Vlasak, Reinhard 2006 2006-01-01 PMC N PMC7088067 16575524.0 10.1007/s10719-006-5439-7 k5tl2ocq 0.560346 Schmidt_1982 UNKNOWN_1988, Strasser_2003, Kim_D_2016
26 Mahajan_2018 Alterations in sialic-acid O-acetylation glycoforms during murine erythrocyte development Vinay S. Mahajan; Faisal Alsufyani; Hamid Mattoo; Ian Rosenberg; Shiv Pillai 2018 2018-11-14 BioRxiv N 10.1101/469254 dsflny30 0.553738 Schmidt_1982 Mahajan_2019, Baumann_2015, Park_2019
27 Bhide_2016 Sialylation of N-glycans: mechanism, cellular compartmentalization and function Bhide, Gaurang P.; Colley, Karen J. 2016 2016-12-14 PMC N PMC7088086 27975143.0 10.1007/s00418-016-1520-x pipmdcmk 0.524113 Schmidt_1982 Langereis_2015, Park_2019, Niemann_1982
28 Vallejo_2000 Differential expression of sialic acid on porcine organs during the maturation process Vallejo, Verónica; Reyes-Leyva, Julio; Hernández, Jesús; Ramírez, Humberto; Delannoy, Philippe; Zenteno, Edgar 2000 2000-07-31 PMC N PMC7129425 11007184.0 10.1016/s0305-0491(00)00213-3 ane3dr9h 0.452310 Kim_D_2016, Schauer_2018, Ceciliani_2004
29 Langereis_2015 Complexity and Diversity of the Mammalian Sialome Revealed by Nidovirus Virolectins Langereis, Martijn A.; Bakkers, Mark J.G.; Deng, Lingquan; Padler-Karavani, Vered; Vervoort, Stephin J.; Hulswit, Ruben J.G.; van Vliet, Arno L.W.; Gerwig, Gerrit J.; de Poot, Stefanie A.H.; Boot, Willemijn; van Ederen, Anne Marie; Heesters, Balthasar A.; van der Loos, Chris M.; van Kuppeveld, Frank J.M.; Yu, Hai; Huizinga, Eric G.; Chen, Xi; Varki, Ajit; Kamerling, Johannis P.; de Groot, Raoul J. 2015 2015-06-18 None N PMC5292239 26095364.0 10.1016/j.celrep.2015.05.044 jexxd6jl 0.451499 Kim_D_2016, McDowell_1988, Strasser_2003
30 Lai_J_2019 Neuraminidase activity and specificity of influenza A virus are influenced by haemagglutinin-receptor binding Lai, Jimmy Chun Cheong; Karunarathna, Herath M. T. K.; Wong, Ho Him; Peiris, Joseph S. M.; Nicholls, John M. 2019 2019-02-27 COMM-USE N PMC6455212 30866786.0 10.1080/22221751.2019.1581034 nsdlhk9g 0.441164
31 Schwegmann-Weßels_2006 Sialic acids as receptor determinants for coronaviruses Schwegmann-Weßels, Christel; Herrler, Georg 2006 2006-01-01 PMC N PMC7088368 16575522.0 10.1007/s10719-006-5437-9 2i5paxb6 0.399146 Strasser_2003
32 Krishna_1997 9-O-Acetylation of Sialomucins: A Novel Marker of Murine CD4 T Cells that Is Regulated during Maturation and Activation Krishna, Murli; Varki, Ajit 1997 1997-06-02 NONCOMM N PMC2196344 9166429.0 h8aovawp 0.391857 Langereis_2015
33 Feuerbaum_2018 De-O-Acetylation of mucin-derived sialic acids by recombinant NanS-p esterases of Escherichia coli O157:H7 strain EDL933 Feuerbaum, S.; Saile, N.; Pohlentz, G.; Müthing, J.; Schmidt, H. 2018 2018-12-31 PMC N PMC7106450 30340996.0 10.1016/j.ijmm.2018.10.001 hfzygxjj 0.389049 Schmidt_1982 Rauvolfova_2008, Kim_D_2016, Strasser_2003
34 Mayr_2008 Influenza C virus and bovine coronavirus esterase reveal a similar catalytic mechanism: new insights for drug discovery Mayr, Juliane; Haselhorst, Thomas; Langereis, Martijn A.; Dyason, Jeffrey C.; Huber, Wolfgang; Frey, Barbara; Vlasak, Reinhard; de Groot, Raoul J.; von Itzstein, Mark 2008 2008-01-15 PMC N PMC7088442 18196455.0 10.1007/s10719-007-9094-4 b9f9xa7h 0.366843 Strasser_2003
35 de_Groot_2006 Structure, function and evolution of the hemagglutinin-esterase proteins of corona- and toroviruses de Groot, Raoul J. 2006 2006-01-01 PMC N PMC7088178 16575523.0 10.1007/s10719-006-5438-8 979e3ae0 0.362996 Langereis_2015
36 Greenberg_2006 Emerging Natural Threats and the Deliberate use of Biological Agents Greenberg, Michael I.; Marty, Aileen M. 2006 2006-06-30 PMC N PMC7131738 16815453.0 10.1016/j.cll.2006.03.002 wygc5mw0 0.362152
37 Khunweeraphong_2012 Establishment of Stable Cell Lines With High Expression of Heterodimers of Human 4F2hc and Human Amino Acid Transporter LAT1 or LAT2 and Delineation of Their Differential Interaction With α-Alkyl Moieties Khunweeraphong, Narakorn; Nagamori, Shushi; Wiriyasermkul, Pattama; Nishinaka, Yumiko; Wongthai, Printip; Ohgaki, Ryuichi; Tanaka, Hidekazu; Tominaga, Hideyuki; Sakurai, Hiroyuki; Kanai, Yoshikatsu 2012 2012-12-31 PMC N PMC7128428 22850614.0 10.1254/jphs.12124fp fr8spifc 0.348578
38 Strasser_2003 Recombinant viral sialate-O-acetylesterases Strasser, Peter; Unger, Ulrike; Strobl, Birgit; Vilas, Ulrike; Vlasak, Reinhard 2003 2003-01-01 PMC N PMC7087582 15454694.0 10.1023/b:glyc.0000043292.64358.f1 68cirjsj 0.324377 Niemann_1982
39 Arming_2010 The human Cas1 protein: A sialic acid-specific O-acetyltransferase? Arming, Sigrid; Wipfler, Dirk; Mayr, Juliane; Merling, Anette; Vilas, Ulrike; Schauer, Roland; Schwartz-Albiez, Reinhard; Vlasak, Reinhard 2010 2010-10-14 PMC N PMC7108626 20947662.0 10.1093/glycob/cwq153 e12bs3e4 0.313101 Schmidt_1982 Baumann_2015, Niemann_1982, Langereis_2015