Topic 05 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 57 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Kandeil_2016 Complete Genome Sequence of Middle East Respiratory Syndrome Coronavirus Isolated from a Dromedary Camel in Egypt Kandeil, Ahmed; Shehata, Mahmoud M.; El Shesheny, Rabeh; Gomaa, Mokhtar R.; Ali, Mohamed A.; Kayali, Ghazi 2016 2016-04-28 COMM-USE N PMC4850855 27125484.0 10.1128/genomea.00309-16 3gzkaqud 0.791620 Kim_D_2016 Alagaili_2014, Kim_Y_2015, Lamers_2016, Adney_2019
2 Lamers_2016 Deletion Variants of Middle East Respiratory Syndrome Coronavirus from Humans, Jordan, 2015 Lamers, Mart M.; Raj, V. Stalin; Shafei, Mah’d; Ali, Sami Sheikh; Abdallh, Sultan M.; Gazo, Mahmoud; Nofal, Samer; Lu, Xiaoyan; Erdman, Dean D.; Koopmans, Marion P.; Abdallat, Mohammad; Haddadin, Aktham; Haagmans, Bart L. 2016 2016-04-23 PMC N PMC4806954 26981770.0 10.3201/eid2204.152065 ozk6avdb 0.719415 Kim_D_2016 Abroug_2014, Chung_2019, Hemida_2015, Al-Abdely_2018
3 Dudas_2016 MERS-CoV recombination: implications about the reservoir and potential for adaptation Dudas, Gytis; Rambaut, Andrew 2016 2016-01-20 None N PMC4989901 27774293.0 10.1093/ve/vev023 iw6e55hb 0.718978 Dudas_2015, Widagdo_2019
4 Dudas_2015 MERS-CoV recombination: implications about the reservoir and potential for adaptation Gytis Dudas; Andrew Rambaut 2015 2015-06-12 BioRxiv N 10.1101/020834 wafvnbdu 0.671055 Dudas_2016, Widagdo_2019
5 Chan_2014 Tropism and replication of Middle East respiratory syndrome coronavirus from dromedary camels in the human respiratory tract: an in-vitro and ex-vivo study Chan, Renee W Y; Hemida, Maged G; Kayali, Ghazi; Chu, Daniel K W; Poon, Leo L M; Alnaeem, Abdelmohsen; Ali, Mohamed A; Tao, Kin P; Ng, Hoi Y; Chan, Michael C W; Guan, Yi; Nicholls, John M; Peiris, J S Malik 2014 2014-10-31 None N PMC7164818 25174549.0 10.1016/s2213-2600(14)70158-4 y59h5bw8 0.669594 Kim_D_2016 Adney_2014, Kandeil_2019, Vergara-Alert_2017
6 Park_2016 Isolation of Middle East Respiratory Syndrome Coronavirus from a Patient of the 2015 Korean Outbreak Park, Wan Beom; Kwon, Nak-Jung; Choe, Pyoeng Gyun; Choi, Su-Jin; Oh, Hong Sang; Lee, Sang Min; Chong, Hyonyong; Kim, Jong-Il; Song, Kyoung-Ho; Bang, Ji Hwan; Kim, Eu Suk; Kim, Hong-Bin; Park, Sang Won; Kim, Nam Joong; Oh, Myoung-don 2016 2016-01-14 NONCOMM N PMC4729515 26839489.0 10.3346/jkms.2016.31.2.315 pdhjl508 0.647217 Adney_2014, Alagaili_2014
7 Chu_D_2018 MERS coronaviruses from camels in Africa exhibit region-dependent genetic diversity Chu, Daniel K. W.; Hui, Kenrie P. Y.; Perera, Ranawaka A. P. M.; Miguel, Eve; Niemeyer, Daniela; Zhao, Jincun; Channappanavar, Rudragouda; Dudas, Gytis; Oladipo, Jamiu O.; Traoré, Amadou; Fassi-Fihri, Ouafaa; Ali, Abraham; Demissié, Getnet F.; Muth, Doreen; Chan, Michael C. W.; Nicholls, John M.; Meyerholz, David K.; Kuranga, Sulyman A.; Mamo, Gezahegne; Zhou, Ziqi; So, Ray T. Y.; Hemida, Maged G.; Webby, Richard J.; Roger, Francois; Rambaut, Andrew; Poon, Leo L. M.; Perlman, Stanley; Drosten, Christian; Chevalier, Veronique; Peiris, Malik 2018 2018-03-20 None N PMC5866576 29507189.0 10.1073/pnas.1718769115 riitjx0f 0.644808 Kim_D_2016 Kandeil_2019, El-Kafrawy_2019
8 Kim_Y_2015 Complete Genome Sequence of Middle East Respiratory Syndrome Coronavirus KOR/KNIH/002_05_2015, Isolated in South Korea Kim, You-Jin; Cho, Yong-Joon; Kim, Dae-Won; Yang, Jeong-Sun; Kim, Hak; Park, SungHan; Han, Young Woo; Yun, Mi-ran; Lee, Han Saem; Kim, A-Reum; Heo, Deok Rim; Kim, Joo Ae; Kim, Su Jin; Jung, Hee-Dong; Kim, Namil; Yoon, Seok-Hwan; Nam, Jeong-Gu; Kang, Hae Ji; Cheong, Hyang-Min; Lee, Joo-Shil; Chun, Jongsik; Kim, Sung Soon 2015 2015-08-13 COMM-USE N PMC4536669 26272558.0 10.1128/genomea.00787-15 jxr35u0w 0.622466 Lu_R_2015, Kandeil_2016, Lamers_2016, Abroug_2014
9 Kim_J_2016 The recent ancestry of Middle East respiratory syndrome coronavirus in Korea has been shaped by recombination Kim, Jin Il; Kim, You-Jin; Lemey, Philippe; Lee, Ilseob; Park, Sehee; Bae, Joon-Yong; Kim, Donghwan; Kim, Hyejin; Jang, Seok-Il; Yang, Jeong-Sun; Kim, Hak; Kim, Dae-Won; Nam, Jeong-Gu; Kim, Sung Soon; Kim, Kisoon; Myun Lee, Jae; Song, Man Ki; Song, Daesub; Chang, Jun; Hong, Kee-Jong; Bae, Yong-Soo; Song, Jin-Won; Lee, Joo-Shil; Park, Man-Seong 2016 2016-01-06 None N PMC4702133 26732651.0 10.1038/srep18825 7pgm8ujk 0.621204 Cotten_2013, Wernery_2015, Kandeil_2019
10 Shirato_2019 Middle East Respiratory Syndrome Coronavirus in Dromedaries in Ethiopia Is Antigenically Different From the Middle East Isolate EMC Shirato, Kazuya; Melaku, Simenew Keskes; Kawachi, Kengo; Nao, Naganori; Iwata-Yoshikawa, Naoko; Kawase, Miyuki; Kamitani, Wataru; Matsuyama, Shutoku; Tessema, Tesfaye Sisay; Sentsui, Hiroshi 2019 2019-06-19 COMM-USE N PMC6593072 31275264.0 10.3389/fmicb.2019.01326 q55ozxtb 0.537269 Kandeil_2019, Lau_S_2020, Harcourt_2018
11 Briese_2014 Middle East Respiratory Syndrome Coronavirus Quasispecies That Include Homologues of Human Isolates Revealed through Whole-Genome Analysis and Virus Cultured from Dromedary Camels in Saudi Arabia Briese, Thomas; Mishra, Nischay; Jain, Komal; Zalmout, Iyad S.; Jabado, Omar J.; Karesh, William B.; Daszak, Peter; Mohammed, Osama B.; Alagaili, Abdulaziz N.; Lipkin, W. Ian 2014 2014-04-29 NONCOMM N PMC4010836 24781747.0 10.1128/mbio.01146-14 mrzukg47 0.498108 Wernery_2015, Alagaili_2014, Chan_2014
12 Chung_2019 Genetic Characterization of Middle East Respiratory Syndrome Coronavirus, South Korea, 2018 Chung, Yoon-Seok; Kim, Jeong Min; Man Kim, Heui; Park, Kye Ryeong; Lee, Anna; Lee, Nam-Joo; Kim, Mi-Seon; Kim, Jun Sub; Kim, Chi-Kyeong; Lee, Jae In; Kang, Chun 2019 2019-05-23 PMC N PMC6478226 30753126.0 10.3201/eid2505.181534 6mrd9axh 0.482491 Kim_D_2016, Lu_R_2015 Lamers_2016, Abroug_2014, Hakawi_2019, Seong_2016
13 Kim_D_2016 Variations in Spike Glycoprotein Gene of MERS-CoV, South Korea, 2015 Kim, Dae-Won; Kim, You-Jin; Park, Sung Han; Yun, Mi-Ran; Yang, Jeong-Sun; Kang, Hae Ji; Han, Young Woo; Lee, Han Saem; Man Kim, Heui; Kim, Hak; Kim, A-Reum; Heo, Deok Rim; Kim, Su Jin; Jeon, Jun Ho; Park, Deokbum; Kim, Joo Ae; Cheong, Hyang-Min; Nam, Jeong-Gu; Kim, Kisoon; Kim, Sung Soon 2016 2016-01-23 PMC N PMC4696701 26691200.0 10.3201/eid2201.151055 0q92ntsm 0.460066 Chung_2019, Lu_R_2015, Lamers_2016
14 Cotten_2013 Transmission and evolution of the Middle East respiratory syndrome coronavirus in Saudi Arabia: a descriptive genomic study Cotten, Matthew; Watson, Simon J; Kellam, Paul; Al-Rabeeah, Abdullah A; Makhdoom, Hatem Q; Assiri, Abdullah; Al-Tawfiq, Jaffar A; Alhakeem, Rafat F; Madani, Hossam; AlRabiah, Fahad A; Hajjar, Sami Al; Al-nassir, Wafa N; Albarrak, Ali; Flemban, Hesham; Balkhy, Hanan H; Alsubaie, Sarah; Palser, Anne L; Gall, Astrid; Bashford-Rogers, Rachael; Rambaut, Andrew; Zumla, Alimuddin I; Memish, Ziad A 2013 2013-12-20 None N PMC3898949 24055451.0 10.1016/s0140-6736(13)61887-5 5pv11lfo 0.456605 Kim_D_2016 Kandeil_2019, Wernery_2015, El-Kafrawy_2019
15 Yusof_2017 Diversity of Middle East respiratory syndrome coronaviruses in 109 dromedary camels based on full-genome sequencing, Abu Dhabi, United Arab Emirates Yusof, Mohammed Farouk; Queen, Krista; Eltahir, Yassir Mohammed; Paden, Clinton R; Al Hammadi, Zulaikha Mohamed Abdel Hameed; Tao, Ying; Li, Yan; Khalafalla, Abdelmalik Ibrahim; Shi, Mang; Zhang, Jing; Mohamed, Muzammil Sayed Ahmed Elhaj; Abd Elaal Ahmed, Mahmud Hamed; Azeez, Ihsaan Abdulwahab; Bensalah, Oum Keltoum; Eldahab, Ziyada Swar; Al Hosani, Farida Ismail; Gerber, Susan I; Hall, Aron J; Tong, Suxiang; Al Muhairi, Salama Suhail 2017 2017-11-08 COMM-USE N PMC5717090 29116217.0 10.1038/emi.2017.89 g0gh28hu 0.435093 Kim_D_2016 Kandeil_2019, Lau_S_2020, Wernery_2015
16 El-Kafrawy_2019 Enzootic patterns of Middle East respiratory syndrome coronavirus in imported African and local Arabian dromedary camels: a prospective genomic study El-Kafrawy, Sherif A; Corman, Victor M; Tolah, Ahmed M; Al Masaudi, Saad B; Hassan, Ahmed M; Müller, Marcel A; Bleicker, Tobias; Harakeh, Steve M; Alzahrani, Abdulrahman A; Alsaaidi, Ghaleb A; Alagili, Abdulaziz N; Hashem, Anwar M; Zumla, Alimuddin; Drosten, Christian; Azhar, Esam I 2019 2019-12-23 None N PMC6926486 31843456.0 10.1016/s2542-5196(19)30243-8 qbu13jgc 0.403862 Kim_D_2016, Reusken_2014 Kandeil_2019, Alagaili_2014, Wernery_2015
17 Alsalihi_2019 Molecular Study and Phylogenetic Analysis of Middle East Respiratory Syndrome Corona Virus (MERSCoV) in Camel and Human Alsalihi, Saba F; Abdelkadhim Jawad, Alaa; Al-Rodhan, Mohsen A 2019 2019-09-23 COMM-USE N PMC7105153 10.1088/1742-6596/1294/6/062097 fo8by4vk 0.396062 Kim_D_2016, Lu_R_2015 Alagaili_2014, Kandeil_2019, Kandeil_2019
18 Kleine-Weber_2019 Spike proteins of novel MERS-coronavirus isolates from North- and West-African dromedary camels mediate robust viral entry into human target cells Kleine-Weber, Hannah; Pöhlmann, Stefan; Hoffmann, Markus 2019 2019-09-30 PMC N PMC7112047 31357164.0 10.1016/j.virol.2019.07.016 fl2nt4ak 0.391129 Kim_D_2016 Lau_S_2020, Wernery_2015
19 Wernery_2015 A phylogenetically distinct Middle East respiratory syndrome coronavirus detected in a dromedary calf from a closed dairy herd in Dubai with rising seroprevalence with age Wernery, Ulrich; Rasoul, IHassab El; Wong, Emily YM; Joseph, Marina; Chen, Yixin; Jose, Shanty; Tsang, Alan KL; Patteril, Nissy Annie Georgy; Chen, Honglin; Elizabeth, Shyna K; Yuen, Kwok-Yung; Joseph, Sunitha; Xia, Ningshao; Wernery, Renate; Lau, Susanna KP; Woo, Patrick CY 2015 2015-12-02 NONCOMM N PMC4715164 26632876.0 10.1038/emi.2015.74 b7uzeq0j 0.377449 Lau_S_2020, Kandeil_2019, El-Kafrawy_2019
20 Chu_D_2014 MERS Coronaviruses in Dromedary Camels, Egypt Chu, Daniel K.W.; Poon, Leo L.M.; Gomaa, Mokhtar M.; Shehata, Mahmoud M.; Perera, Ranawaka A.P.M.; Abu Zeid, Dina; El Rifay, Amira S.; Siu, Lewis Y.; Guan, Yi; Webby, Richard J.; Ali, Mohamed A.; Peiris, Malik; Kayali, Ghazi 2014 2014-06-23 PMC N PMC4036765 24856660.0 10.3201/eid2006.140299 nebuvunm 0.356701 Kim_D_2016 Alagaili_2014, Müller_2014, Saqib_2017
21 Assiri_2016 Increase in Middle East Respiratory Syndrome-Coronavirus Cases in Saudi Arabia Linked to Hospital Outbreak With Continued Circulation of Recombinant Virus, July 1–August 31, 2015 Assiri, Abdullah M.; Biggs, Holly M.; Abedi, Glen R.; Lu, Xiaoyan; Bin Saeed, Abdulaziz; Abdalla, Osman; Mohammed, Mutaz; Al-Abdely, Hail M.; Algarni, Homoud S.; Alhakeem, Raafat F.; Almasri, Malak M.; Alsharef, Ali A.; Nooh, Randa; Erdman, Dean D.; Gerber, Susan I.; Watson, John T. 2016 2016-08-03 NONCOMM N PMC5047409 27704019.0 10.1093/ofid/ofw165 qxk97kdz 0.346061 Kim_D_2016, Lamers_2016 Aleanizy_2017, Assiri_2016, Alagaili_2014
22 Seong_2016 Microevolution of Outbreak-Associated Middle East Respiratory Syndrome Coronavirus, South Korea, 2015 Seong, Moon-Woo; Kim, So Yeon; Corman, Victor Max; Kim, Taek Soo; Cho, Sung Im; Kim, Man Jin; Lee, Seung Jun; Lee, Jee-Soo; Seo, Soo Hyun; Ahn, Ji Soo; Yu, Byeong Su; Park, Nare; Oh, Myoung-don; Park, Wan Beom; Lee, Ji Yeon; Kim, Gayeon; Joh, Joon Sung; Jeong, Ina; Kim, Eui Chong; Drosten, Christian; Park, Sung Sup 2016 2016-02-23 PMC N PMC4734539 26814649.0 10.3201/eid2202.151700 b7j6bwv7 0.339499 Kim_D_2016 Chung_2019, Lamers_2016, Park_2016, Abroug_2014
23 van_Doremalen_2017 High Prevalence of Middle East Respiratory Coronavirus in Young Dromedary Camels in Jordan van Doremalen, Neeltje; Hijazeen, Zaidoun S.K.; Holloway, Peter; Al Omari, Bilal; McDowell, Chester; Adney, Danielle; Talafha, Hani A.; Guitian, Javier; Steel, John; Amarin, Nadim; Tibbo, Markos; Abu-Basha, Ehab; Al-Majali, Ahmad M.; Munster, Vincent J.; Richt, Juergen A. 2017 2017-02-01 PMC N PMC5278817 28009529.0 10.1089/vbz.2016.2062 8zyzbl2e 0.332049 Kim_D_2016 Alagaili_2014, Kandeil_2019, Kandeil_2019, Adney_2014