Topic 01 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 50 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Kodama_2017 Respiratory Syncytial Virus and Other Noninfluenza Respiratory Viruses in Older Adults Kodama, Fumihiro; Nace, David A.; Jump, Robin L.P. 2017 2017-12-31 PMC N PMC5846091 29079159.0 10.1016/j.idc.2017.07.006 twog1fpj 0.849999
2 Monto_2014 Frequency of Acute Respiratory Illnesses and Circulation of Respiratory Viruses in Households With Children Over 3 Surveillance Seasons Monto, Arnold S.; Malosh, Ryan E.; Petrie, Joshua G.; Thompson, Mark G.; Ohmit, Suzanne E. 2014 2014-06-06 PMC N PMC4296188 24907381.0 10.1093/infdis/jiu327 9stkuexv 0.798074 Kodama_2017
3 Zimmerman_2014 Influenza and other respiratory virus infections in outpatients with medically attended acute respiratory infection during the 2011-12 influenza season Zimmerman, Richard K; Rinaldo, Charles R; Nowalk, Mary Patricia; GK, Balasubramani; Thompson, Mark G; Moehling, Krissy K; Bullotta, Arlene; Wisniewski, Stephen 2014 2014-04-08 COMM-USE N PMC4057994 24852890.0 10.1111/irv.12247 cd78n2rm 0.747293 Falsey_2014, Simpson_2016
4 Nesmith_2017 Sensitive Diagnostics Confirm That Influenza C is an Uncommon Cause of Medically Attended Respiratory Illness in Adults Nesmith, Natalie; Williams, John V; Johnson, Monika; Zhu, Yuwei; Griffin, Marie; Talbot, H Keipp 2017 2017-05-25 PMC N PMC5850529 28541414.0 10.1093/cid/cix471 vbb4ho7j 0.740903
5 Gilca_2014 Other Respiratory Viruses Are Important Contributors to Adult Respiratory Hospitalizations and Mortality Even During Peak Weeks of the Influenza Season Gilca, Rodica; Amini, Rachid; Douville-Fradet, Monique; Charest, Hugues; Dubuque, Josée; Boulianne, Nicole; Skowronski, Danuta M.; De Serres, Gaston 2014 2014-09-22 NONCOMM N PMC4281811 25734152.0 10.1093/ofid/ofu086 e32dzhij 0.728874 Simpson_2016, Falsey_2014
6 Huo_X_2012 Surveillance of 16 respiratory viruses in patients with influenza‐like illness in Nanjing, China Huo, Xiang; Qin, Yuanfang; Qi, Xian; Zu, Rongqiang; Tang, Fenyang; Li, Liang; Hu, Zhibin; Zhu, Fengcai 2012 2012-10-10 PMC N PMC7166984 23080506.0 10.1002/jmv.23401 sblgn52c 0.706524 Lekana-Douki_2013
7 van_Kruijssen_2006 Detection of respiratory pathogens by real-time PCR in children with clinical suspicion of pertussis van Kruijssen, Alida M.; Templeton, Kate E.; van der Plas, Roos N.; van Doorn, H. Rogier; Claas, Eric C. J.; Sukhai, Ram N.; Kuijper, Ed J. 2006 2006-12-20 PMC N PMC7086727 17177069.0 10.1007/s00431-006-0378-7 rf933a0y 0.692183
8 Kono_2013 Viruses associated with influenza‐like‐illnesses in Papua New Guinea, 2010 Kono, Jacinta; Jonduo, Marinjho H.; Omena, Matthew; Siba, Peter M.; Horwood, Paul F. 2013 2013-10-17 PMC N PMC7166351 24136362.0 10.1002/jmv.23786 uivlg0uf 0.653741
9 Chiu_2017 Surveillance of upper respiratory infections using a new multiplex PCR assay compared to conventional methods during the influenza season in Taiwan Chiu, Shu-Chun; Lin, Yung-Cheng; Wang, Hsiao-Chi; Hsu, Jen-Jen; Yeh, Ting-Kai; Liu, Hsin-Fu; Lin, Jih-Hui 2017 2017-08-31 PMC N PMC7110889 28625839.0 10.1016/j.ijid.2017.06.011 nvuj3djn 0.624402
10 Zimmerman_2014 Detection of Influenza Virus Infection Using Two PCR Methods Zimmerman, Richard K.; Rinaldo, Charles R.; Nowalk, Mary Patricia; Balasubramani, G. K.; Thompson, Mark G.; Bullotta, Arlene; Susick, Michael; Wisniewski, Stephen 2014 2014-12-09 COMM-USE N PMC4276355 25574169.0 10.1155/2014/274679 30t38gzl 0.622462
11 Kadjo_2012 Sentinel surveillance for influenza and other respiratory viruses in Côte d’Ivoire, 2003–2010 Kadjo, Hervé A.; Ekaza, Euloge; Coulibaly, Daouda; Kouassi, Damus P.; Nzussouo, Ndahwouh T.; Kouakou, Bertin; Ouattara, Abdoulaye; Adjogoua, Edgard V.; Akoua–Koffi, Chantal G.; Elia, Gilbernair A.; Victoir, Kathleen; Bretin‐Dosso, Mireille C.; Mott, Joshua A. 2012 2012-08-02 PMC N PMC5779848 22863403.0 10.1111/j.1750-2659.2012.00389.x dnjvf4d7 0.618518 Meerhoff_2006, Simpson_2016
12 van_Beek_2017 Influenza-like Illness Incidence Is Not Reduced by Influenza Vaccination in a Cohort of Older Adults, Despite Effectively Reducing Laboratory-Confirmed Influenza Virus Infections van Beek, Josine; Veenhoven, Reinier H; Bruin, Jacob P; van Boxtel, Renée A J; de Lange, Marit M A; Meijer, Adam; Sanders, Elisabeth A M; Rots, Nynke Y; Luytjes, Willem 2017 2017-08-15 PMC N PMC7107403 28931240.0 10.1093/infdis/jix268 eqf6ame6 0.616918 Falsey_2014, Simpson_2016
13 Peci_2012 Community‐acquired respiratory viruses and co‐infection among patients of Ontario sentinel practices, April 2009 to February 2010 Peci, Adriana; Winter, Anne‐Luise; Gubbay, Jonathan B.; Skowronski, Danuta M.; Balogun, Elizabeth I.; De Lima, Cedric; Crowcroft, Natasha S.; Rebbapragada, Anu 2012 2012-08-09 PMC N PMC5781002 22883216.0 10.1111/j.1750-2659.2012.00418.x hnsyas9q 0.610509
14 Ye_C_2017 Viral pathogens among elderly people with acute respiratory infections in Shanghai, China: Preliminary results from a laboratory‐based surveillance, 2012‐2015 Ye, Chuchu; Zhu, Weiping; Yu, Jianxing; Li, Zhongjie; Fu, Yifei; Lan, Yajia; Lai, Shengjie; Wang, Yuanping; Pan, Lifeng; Sun, Qiao; Zhao, Genming 2017 2017-07-06 PMC N PMC7166983 27943329.0 10.1002/jmv.24751 d63noia4 0.605846
15 Yun_H_2015 Changes in Clinical Presentation and Epidemiology of Respiratory Pathogens Associated With Acute Respiratory Illness in Military Trainees After Reintroduction of Adenovirus Vaccine Yun, Heather C.; Young, Adam N.; Caballero, Manuel Y.; Lott, Lisa; Cropper, Thomas L.; Murray, Clinton K. 2015 2015-09-01 NONCOMM N PMC4569648 26380351.0 10.1093/ofid/ofv120 qdehf6rb 0.601227
16 Althouse_2018 Seasonality of respiratory viruses causing hospitalizations for acute respiratory infections in children in Nha Trang, Vietnam Althouse, Benjamin M; Flasche, Stefan; Minh, Le Nhat; Thiem, Vu Dinh; Hashizume, Masahiro; Ariyoshi, Koya; Anh, Dang Duc; Rodgers, Gail L.; Klugman, Keith P.; Hu, Hao; Yoshida, Lay-Myint 2018 2018-10-31 PMC N PMC7110808 30118916.0 10.1016/j.ijid.2018.08.001 vfagxsdz 0.594122
17 Falchi_2011 Nationwide surveillance of 18 respiratory viruses in patients with influenza‐like illnesses: A pilot feasibility study in the French Sentinel Network Falchi, Alessandra; Turbelin, Clément; Andreoletti, Laurent; Arena, Christophe; Blanchon, Thierry; Bonmarin, Isabelle; Hanslik, Thomas; Leruez‐Ville, Marianne; De Lamballerie, Xavier; Carrat, Fabrice 2011 2011-06-02 PMC N PMC7166811 21638286.0 10.1002/jmv.22113 wf7fzz7g 0.590236 Lekana-Douki_2013
18 Khuri-Bulos_2014 Middle East respiratory syndrome coronavirus not detected in children hospitalized with acute respiratory illness in Amman, Jordan, March 2010 to September 2012 Khuri-Bulos, N.; Payne, D.C.; Lu, X.; Erdman, D.; Wang, L.; Faouri, S.; Shehabi, A.; Johnson, M.; Becker, M.M.; Denison, M.R.; Williams, J.V.; Halasa, N.B. 2014 2014-07-31 None N PMC4618562 24313317.0 10.1111/1469-0691.12438 trc4a900 0.582299
19 O’Shea_2007 Respiratory syncytial virus: an important cause of acute respiratory illness among young adults undergoing military training O’Shea, Matthew K.; Pipkin, Christopher; Cane, Patricia A.; Gray, Gregory C. 2007 2007-12-10 PMC N PMC2564797 18846262.0 10.1111/j.1750-2659.2007.00029.x pzbh8dd3 0.572045
20 Falsey_2014 Respiratory Syncytial Virus and Other Respiratory Viral Infections in Older Adults With Moderate to Severe Influenza-like Illness Falsey, Ann R.; McElhaney, Janet E.; Beran, Jiri; van Essen, Gerrit A.; Duval, Xavier; Esen, Meral; Galtier, Florence; Gervais, Pierre; Hwang, Shinn-Jang; Kremsner, Peter; Launay, Odile; Leroux-Roels, Geert; McNeil, Shelly A.; Nowakowski, Andrzej; Richardus, Jan Hendrik; Ruiz-Palacios, Guillermo; St Rose, Suzanne; Devaster, Jeanne-Marie; Oostvogels, Lidia; Durviaux, Serge; Taylor, Sylvia 2014 2014-06-15 NONCOMM N PMC4038137 24482398.0 10.1093/infdis/jit839 o4mhknq4 0.565162
21 SZILAGYI_2016 Incidence and viral aetiologies of acute respiratory illnesses (ARIs) in the United States: a population-based study SZILAGYI, P. G.; BLUMKIN, A.; TREANOR, J. J.; GALLIVAN, S.; ALBERTIN, C.; LOFTHUS, G. K.; SCHNABEL, K. C.; DONAHUE, J. G.; THOMPSON, M. G.; SHAY, D. K. 2016 2016-03-02 PMC N PMC7112994 26931351.0 10.1017/s0950268816000315 mrsmwxvo 0.556840
22 Francis_2016 An observational study of febrile seizures: the importance of viral infection and immunization Francis, Joshua R.; Richmond, Peter; Robins, Christine; Lindsay, Katie; Levy, Avram; Effler, Paul V.; Borland, Meredith; Blyth, Christopher C. 2016 2016-12-03 COMM-USE N PMC5135752 27914475.0 10.1186/s12887-016-0740-5 91goqi90 0.556546
23 Anders_2015 Epidemiology and Virology of Acute Respiratory Infections During the First Year of Life: A Birth Cohort Study in Vietnam Anders, Katherine L.; Nguyen, Hoa L.; Nguyen, Nguyet Minh; Van Thuy, Nguyen Thi; Hong Van, Nguyen Thi; Hieu, Nguyen Trong; Hong Tham, Nguyen Thi; Thanh Ha, Phan Thi; Lien, Le Bich; Vinh Chau, Nguyen Van; Ty Hang, Vu Thi; van Doorn, H. Rogier; Simmons, Cameron P. 2015 2015-03-24 PMC N PMC4418783 25674708.0 10.1097/inf.0000000000000643 ug2ewxyl 0.555976
24 Chittaganpitch_2018 Viral etiologies of influenza‐like illness and severe acute respiratory infections in Thailand Chittaganpitch, Malinee; Waicharoen, Sunthareeya; Yingyong, Thitipong; Praphasiri, Prabda; Sangkitporn, Somchai; Olsen, Sonja J.; Lindblade, Kim A. 2018 2018-05-08 COMM-USE N PMC6005612 29518269.0 10.1111/irv.12554 pcctrxvf 0.552664
25 Masse_2017 Epidemiology of Respiratory Pathogens among Elderly Nursing Home Residents with Acute Respiratory Infections in Corsica, France, 2013–2017 Masse, Shirley; Capai, Lisandru; Falchi, Alessandra 2017 2017-12-17 COMM-USE N PMC5748090 29392127.0 10.1155/2017/1423718 5wf9c73a 0.548799 Song_2018 Masse_2016
26 Broor_2014 Rates of respiratory virus-associated hospitalization in children aged <5 years in rural northern India Broor, Shobha; Dawood, Fatimah S.; Pandey, Bharti G.; Saha, Siddhartha; Gupta, Vivek; Krishnan, Anand; Rai, Sanjay; Singh, Pratibha; Erdman, Dean; Lal, Renu B. 2014 2014-03-31 PMC N PMC7112698 24269675.0 10.1016/j.jinf.2013.11.005 fsbp4fky 0.548144 Song_2018
27 Jiang_2017 Detection of viral respiratory pathogens in mild and severe acute respiratory infections in Singapore Jiang, Lili; Lee, Vernon Jian Ming; Cui, Lin; Lin, Raymond; Tan, Chyi Lin; Tan, Linda Wei Lin; Lim, Wei-yen; Leo, Yee-Sin; Low, Louie; Hibberd, Martin; Chen, Mark I-Cheng 2017 2017-02-20 COMM-USE N PMC5317157 28218288.0 10.1038/srep42963 w30hsr4m 0.547401 Falsey_2014
28 Murray_2016 Impact of Infection Prevention and Control Initiatives on Acute Respiratory Infections in a Pediatric Long-Term Care Facility Murray, Meghan T.; Jackson, Olivia; Cohen, Bevin; Hutcheon, Gordon; Saiman, Lisa; Larson, Elaine; Neu, Natalie 2016 2016-04-07 PMC N PMC5108294 27053088.0 10.1017/ice.2016.73 ndnj09mk 0.545426
29 Lambert_2008 Parent-collected respiratory specimens—A novel method for respiratory virus and vaccine efficacy research Lambert, Stephen B.; Allen, Kelly M.; Nolan, Terence M. 2008 2008-03-28 PMC N PMC7131404 18329758.0 10.1016/j.vaccine.2008.01.055 gihg7nwr 0.542432
30 Longtin_2010 Rhinovirus Outbreaks in Long-term Care Facilities, Ontario, Canada Longtin, Jean; Marchand-Austin, Alex; Winter, Anne-Luise; Patel, Samir; Eshaghi, Alireza; Jamieson, Frances; Low, Donald E.; Gubbay, Jonathan B. 2010 2010-09-23 PMC N PMC3294989 20735934.0 10.3201/eid1609.100476 myjyw8ei 0.540840 Kodama_2017 Louie_2005
31 Bellei_2008 Acute respiratory infection and influenza‐like illness viral etiologies in Brazilian adults Bellei, Nancy; Carraro, Emerson; Perosa, Ana; Watanabe, Aripuana; Arruda, Eurico; Granato, Celso 2008 2008-08-19 PMC N PMC7166366 18712837.0 10.1002/jmv.21295 lw1ws89x 0.531473
32 Kim_T_2012 Characteristics of respiratory viral infections during influenza season in Canadian Hutterite Communities Kim, Tae H.; Russell, Margaret L.; Fonseca, Kevin; Aoki, Fred; Horsman, Gregory; Van Caeseele, Paul; Chokani, Khami; Voight, Mark; Babiuk, Lorne; Moss, Lorraine; Webby, Richard; Earn, David J. D.; Singh, Pardeep; Howse, Cassandra; Loeb, Mark 2012 2012-10-19 PMC N PMC4634280 23078120.0 10.1111/irv.12021 si7gp67x 0.529881 Simpson_2016
33 Qin_X_2016 Comparison of molecular detection methods for pertussis in children during a state-wide outbreak Qin, X.; Zerr, D. M.; Kronman, M. P.; Adler, A. L.; Berry, J. E.; Rich, S.; Buccat, A. M.; Xu, M.; Englund, J. A. 2016 2016-04-27 COMM-USE N PMC4847268 27121506.0 10.1186/s12941-016-0142-4 aqeg8iq8 0.520431 van_Kruijssen_2006
34 McLean_2017 School absenteeism among school‐aged children with medically attended acute viral respiratory illness during three influenza seasons, 2012‐2013 through 2014‐2015 McLean, Huong Q.; Peterson, Siri H.; King, Jennifer P.; Meece, Jennifer K.; Belongia, Edward A. 2017 2017-02-15 COMM-USE N PMC5410714 27885805.0 10.1111/irv.12440 1o3mc327 0.517457 Azziz-Baumgartner_2012 Simpson_2016
35 Asner_2012 Respiratory viral infections in institutions from late stage of the first and second waves of pandemic influenza A (H1N1) 2009, Ontario, Canada Asner, Sandra; Peci, Adriana; Marchand‐Austin, Alex; Winter, Anne‐Luise; Olsha, Romy; Kristjanson, Erik; Low, Donald E.; Gubbay, Jonathan B. 2012 2012-02-21 PMC N PMC4941672 22353417.0 10.1111/j.1750-2659.2012.00336.x 3v0asfa7 0.516244 Lekana-Douki_2013
36 Todd_2018 Primary care influenza‐like illness surveillance in Ho Chi Minh City, Vietnam 2013‐2015 Todd, Stacy; Huong, Nguyen Thi Cam; Thanh, Nguyen Thi Le; Vy, Nguyen Ha Thao; Hung, Nguyen Thanh; Thao, Tran Thi Nhu; Phuong, Huynh Thi; van Doorn, Rogier; Hang, Vu Thi Ty; Chau, Nguyen Van Vinh; Read, Jonathan M.; Lalloo, David G.; Boni, Maciej F. 2018 2018-07-07 COMM-USE N PMC6086852 29858879.0 10.1111/irv.12574 txrq9f0v 0.506404 Lekana-Douki_2013 Machablishvili_2018
37 Seah_2010 Viral agents responsible for febrile respiratory illnesses among military recruits training in tropical Singapore Seah, Shirley Gek-Kheng; Lim, Elizabeth Ai-Sim; Kok-Yong, Seng; Liaw, Jasper Chin-Wen; Lee, Vernon; Kammerer, Peter; Metzgar, David; Russell, Kevin L.; Tan, Boon-Huan 2010 2010-03-31 PMC N PMC7108280 20079688.0 10.1016/j.jcv.2009.12.011 73591t3m 0.506404 Lau_Y_2018
38 Morgan_2012 Hospitalization due to human parainfluenza virus–associated lower respiratory tract illness in rural Thailand Morgan, Oliver W.; Chittaganpitch, Malinee; Clague, Birgit; Chantra, Somrak; Sanasuttipun, Wichai; Prapasiri, Prabda; Naorat, Sathapana; Laosirithavorn, Yongjua; Peret, Teresa C. T.; Erdman, Dean D.; Baggett, Henry C.; Olsen, Sonja J.; Fry, Alicia M. 2012 2012-06-21 PMC N PMC5779843 22716273.0 10.1111/j.1750-2659.2012.00393.x 44rlwtjt 0.501250 Azziz-Baumgartner_2012
39 Zachariah_2016 Community ‐and hospital laboratory‐based surveillance for respiratory viruses Zachariah, Philip; Whittier, Susan; Reed, Carrie; LaRussa, Philip; Larson, Elaine L.; Vargas, Celibell Y.; Saiman, Lisa; Stockwell, Melissa S. 2016 2016-03-27 COMM-USE N PMC4947942 26987664.0 10.1111/irv.12387 v0wdlay5 0.487151 Sáez-López_2019
40 Wansaula_2016 Surveillance for severe acute respiratory infections in Southern Arizona, 2010–2014 Wansaula, Zimy; Olsen, Sonja J.; Casal, Mariana G.; Golenko, Catherine; Erhart, Laura M.; Kammerer, Peter; Whitfield, Natalie; McCotter, Orion Z. 2016 2016-01-29 COMM-USE N PMC4814863 26590069.0 10.1111/irv.12360 ux5t1wfr 0.480049
41 Simpson_2016 Incidence of Medically Attended Respiratory Syncytial Virus and Influenza Illnesses in Children 6–59 Months Old During Four Seasons Simpson, Melissa D.; Kieke, Burney A.; Sundaram, Maria E.; McClure, David L.; Meece, Jennifer K.; Sifakis, Frangiscos; Gasser, Robert A.; Belongia, Edward A. 2016 2016-04-21 NONCOMM N PMC4943552 27419158.0 10.1093/ofid/ofw081 rnvyc2rw 0.472670 Azziz-Baumgartner_2012
42 Walsh_2013 Clinical Impact of Human Coronaviruses 229E and OC43 Infection in Diverse Adult Populations Walsh, Edward E.; Shin, Jae Hyun; Falsey, Ann R. 2013 2013-08-06 PMC N PMC3805243 23922367.0 10.1093/infdis/jit393 pvoe8enz 0.460951
43 Howard_2012 Virus detection and its association with symptoms during influenza‐like illness in a sample of healthy adults enrolled in a randomised controlled vaccine trial Howard, Peter F.; McCaw, James M.; Richmond, Peter C.; Nissen, Michael; Sloots, Theo; Lambert, Stephen B.; Lai, Michael; Greenberg, Michael; Nolan, Terry; McVernon, Jodie 2012 2012-06-19 PMC N PMC5779839 22712831.0 10.1111/j.1750-2659.2012.00395.x 6vxj083j 0.460591 Falsey_2014, Simpson_2016
44 Cooper_2007 The contribution of respiratory pathogens to the seasonality of NHS Direct calls Cooper, D.L.; Smith, G.E.; Edmunds, W.J.; Joseph, C.; Gerard, E.; George, R.C. 2007 2007-09-30 PMC N PMC7112625 17582503.0 10.1016/j.jinf.2007.04.353 su33vn15 0.455494
45 Tan_X_2014 Respiratory viral pathogens among Singapore military servicemen 2009 – 2012: epidemiology and clinical characteristics Tan, Xin Quan; Zhao, Xiahong; Lee, Vernon J; Loh, Jin Phang; Tan, Boon Huan; Koh, Wee Hong Victor; Ng, Sock Hoon; Chen, Mark I-Cheng; Cook, Alex Richard 2014 2014-04-15 COMM-USE N PMC4006965 24735158.0 10.1186/1471-2334-14-204 jozrgcq3 0.455431
46 Meerhoff_2006 Surveillance recommendations based on an exploratory analysis of respiratory syncytial virus reports derived from the European Influenza Surveillance System Meerhoff, Tamara J; Fleming, Douglas; Smith, Ann; Mosnier, Anne; van Gageldonk-Lafeber, Arianne B; Paget, W John 2006 2006-08-09 COMM-USE N PMC1560143 16899110.0 10.1186/1471-2334-6-128 wrhr237o 0.454328 Sáez-López_2019
47 Salmón‐Mulanovich_2010 Frequency of human bocavirus (HBoV) infection among children with febrile respiratory symptoms in Argentina, Nicaragua and Peru Salmón‐Mulanovich, Gabriela; Sovero, Merly; Laguna‐Torres, V. Alberto; Kochel, Tadeusz J.; Lescano, Andres G.; Chauca, Gloria; Sanchez, J. Felix; Rodriguez, Francisco; Parrales, Eduardo; Ocaña, Victor; Barrantes, Melvin; Blazes, David L.; Montgomery, Joel M. 2010 2010-09-16 PMC N PMC4066840 21138534.0 10.1111/j.1750-2659.2010.00160.x k54vjyiz 0.452416
48 MacIntyre_2012 Respiratory viruses transmission from children to adults within a household MacIntyre, Chandini Raina; Ridda, Iman; Seale, Holly; Gao, Zhanhai; Ratnamohan, Vigneswary Mala; Donovan, Linda; Zeng, Frank; Dwyer, Dominic E. 2012 2012-04-19 PMC N PMC7115576 22119589.0 10.1016/j.vaccine.2011.11.047 beeq8m4v 0.451534
49 Louie_2005 Rhinovirus Outbreak in a Long Term Care Facility for Elderly Persons Associated with Unusually High Mortality Louie, Janice K.; Yagi, Shigeo; Nelson, Fritzi A.; Kiang, David; Glaser, Carol A.; Rosenberg, Jon; Cahill, Christine K.; Schnurr, David P. 2005 2005-07-15 PMC N PMC7107978 15983926.0 10.1086/430915 a7ajjqld 0.451280 Hand_2018
50 Carvalho_2013 Prospective surveillance study of acute respiratory infections, influenza-like illness and seasonal influenza vaccine in a cohort of juvenile idiopathic arthritis patients Carvalho, Luciana M; de Paula, Flávia E; Silvestre, Rodrigo V D; Roberti, Luciana R; Arruda, Eurico; Mello, Wyller A; Ferriani, Virginia P L 2013 2013-03-07 COMM-USE N PMC3602114 23510667.0 10.1186/1546-0096-11-10 9gpxz57m 0.450745 Simpson_2016, Falsey_2014
51 Sundaram_2013 Influenza Vaccination Is Not Associated With Detection of Noninfluenza Respiratory Viruses in Seasonal Studies of Influenza Vaccine Effectiveness Sundaram, Maria E.; McClure, David L.; VanWormer, Jeffrey J.; Friedrich, Thomas C.; Meece, Jennifer K.; Belongia, Edward A. 2013 2013-09-15 PMC N PMC7107973 23748138.0 10.1093/cid/cit379 s8j78naz 0.445291 Falsey_2014
52 Radin_2014 Epidemiology of Pathogen-Specific Respiratory Infections among Three US Populations Radin, Jennifer M.; Hawksworth, Anthony W.; Kammerer, Peter E.; Balansay, Melinda; Raman, Rema; Lindsay, Suzanne P.; Brice, Gary T. 2014 2014-12-30 COMM-USE N PMC4280218 25549089.0 10.1371/journal.pone.0114871 aham72b9 0.443047
53 Gorse_2009 Human Coronavirus and Acute Respiratory Illness in Older Adults with Chronic Obstructive Pulmonary Disease Gorse, Geoffrey J.; O’Connor, Theresa Z.; Hall, Susan L.; Vitale, Joseph N.; Nichol, Kristin L. 2009 2009-03-15 PMC N PMC7110218 19239338.0 10.1086/597122 fhfxnr76 0.431530 Hand_2018
54 Moore_2011 Use of data linkage to investigate the aetiology of acute lower respiratory infection hospitalisations in children Moore, Hannah C; de Klerk, Nicholas; Keil, Anthony D; Smith, David W; Blyth, Christopher C; Richmond, Peter; Lehmann, Deborah 2011 2011-11-14 PMC N PMC7166791 22077532.0 10.1111/j.1440-1754.2011.02229.x f907gbd8 0.429399
55 Dierig_2014 Epidemiology of respiratory viral infections in children enrolled in a study of influenza vaccine effectiveness Dierig, Alexa; Heron, Leon G; Lambert, Stephen B; Yin, Jiehui Kevin; Leask, Julie; Chow, Maria Yui Kwan; Sloots, Theo P; Nissen, Michael D; Ridda, Iman; Booy, Robert 2014 2014-01-31 COMM-USE N PMC4181477 24483149.0 10.1111/irv.12229 af4jlmnd 0.428682 Simpson_2016, Nolan_2015
56 Homaira_2016 Respiratory Viruses Associated Hospitalization among Children Aged <5 Years in Bangladesh: 2010-2014 Homaira, Nusrat; Luby, Stephen P.; Hossain, Kamal; Islam, Kariul; Ahmed, Makhdum; Rahman, Mustafizur; Rahman, Ziaur; Paul, Repon C.; Bhuiyan, Mejbah Uddin; Brooks, W. Abdullah; Sohel, Badrul Munir; Banik, Kajal Chandra; Widdowson, Marc-Alain; Willby, Melisa; Rahman, Mahmudur; Bresee, Joseph; Ramirez, Katharine-Sturm; Azziz-Baumgartner, Eduardo 2016 2016-02-03 COMM-USE N PMC4739641 26840782.0 10.1371/journal.pone.0147982 tgu72tfl 0.423536 Azziz-Baumgartner_2012 Broor_2014
57 Fowlkes_2013 Viruses Associated With Acute Respiratory Infections and Influenza-like Illness Among Outpatients From the Influenza Incidence Surveillance Project, 2010–2011 Fowlkes, Ashley; Giorgi, Andrea; Erdman, Dean; Temte, Jon; Goodin, Kate; Di Lonardo, Steve; Sun, Yumei; Martin, Karen; Feist, Michelle; Linz, Rachel; Boulton, Rachelle; Bancroft, Elizabeth; McHugh, Lisa; Lojo, Jose; Filbert, Kimberly; Finelli, Lyn 2013 2013-12-12 PMC N PMC5749912 24338352.0 10.1093/infdis/jit806 d39s23k8 0.414012 Simpson_2016, Falsey_2014
58 Miller_2009 A novel group of rhinoviruses is associated with asthma hospitalizations Miller, E. Kathryn; Edwards, Kathryn M.; Weinberg, Geoffrey A.; Iwane, Marika K.; Griffin, Marie R.; Hall, Caroline B.; Zhu, Yuwei; Szilagyi, Peter G.; Morin, Laura-Lee; Heil, Luke H.; Lu, Xiaoyan; Williams, John V. 2009 2009-01-31 PMC N PMC7112283 19027147.0 10.1016/j.jaci.2008.10.007 mp50ktnz 0.405714 Azziz-Baumgartner_2012
59 Falsey_2015 The “Common Cold” in Frail Older Persons: Impact of Rhinovirus and Coronavirus in a Senior Daycare Center Falsey, Ann R.; McCann, Robert M.; Hall, William J.; Criddle, Mary M.; Formica, Maria A.; Wycoff, Dennis; Kolassa, John E. 2015 2015-04-27 PMC N PMC7166646 9180664.0 10.1111/j.1532-5415.1997.tb01474.x vgposxom 0.401029 Hand_2018
60 Caserta_2019 Measuring the Severity of Respiratory Illness in the First 2 Years of Life in Preterm and Term Infants Caserta, Mary T.; Yang, Hongmei; Bandyopadhyay, Sanjukta; Qiu, Xing; Gill, Steven R.; Java, James; McDavid, Andrew; Falsey, Ann R.; Topham, David J.; Holden-Wiltse, Jeanne; Scheible, Kristin; Pryhuber, Gloria 2019 2019-11-30 PMC N PMC6815715 31377041.0 10.1016/j.jpeds.2019.06.061 8s9o9yjo 0.395702
61 Russell_2018 Comparison of outpatient medically attended and community‐level influenza‐like illness—New York City, 2013‐2015 Russell, Kate E.; Fowlkes, Ashley; Stockwell, Melissa S.; Vargas, Celibell Y.; Saiman, Lisa; Larson, Elaine L.; LaRussa, Philip; Di Lonardo, Steve; Popowich, Michael; St. George, Kirsten; Steffens, Andrea; Reed, Carrie 2018 2018-02-14 COMM-USE N PMC5907822 29350791.0 10.1111/irv.12540 j4s2cioj 0.390199 Simpson_2016, Todd_2018, Carvalho_2013
62 Hand_2018 Severe Respiratory Illness Outbreak Associated with Human Coronavirus NL63 in a Long-Term Care Facility Hand, Julie; Rose, Erica Billig; Salinas, Andrea; Lu, Xiaoyan; Sakthivel, Senthilkumar K.; Schneider, Eileen; Watson, John T. 2018 2018-10-23 PMC N PMC6154147 30226169.0 10.3201/eid2410.180862 drgmqjbf 0.383538
63 Nasreen_2014 Population-Based Incidence of Severe Acute Respiratory Virus Infections among Children Aged <5 Years in Rural Bangladesh, June–October 2010 Nasreen, Sharifa; Luby, Stephen P.; Brooks, W. Abdullah; Homaira, Nusrat; Mamun, Abdullah Al; Bhuiyan, Mejbah Uddin; Rahman, Mustafizur; Ahmed, Dilruba; Abedin, Jaynal; Rahman, Mahmudur; Alamgir, A. S. M.; Fry, Alicia M.; Streatfield, Peter Kim; Rahman, Anisur; Bresee, Joseph; Widdowson, Marc-Alain; Azziz-Baumgartner, Eduardo 2014 2014-02-25 COMM-USE N PMC3934972 24587163.0 10.1371/journal.pone.0089978 qdqnrhai 0.379424
64 Tam_C_2018 Epidemiology and Transmission of Respiratory Infections in Thai Army Recruits: A Prospective Cohort Study Tam, Clarence C.; Anderson, Kathryn B.; Offeddu, Vittoria; Weg, Alden; Macareo, Louis R.; Ellison, Damon W.; Rangsin, Ram; Fernandez, Stefan; Gibbons, Robert V.; Yoon, In-Kyu; Simasathien, Sriluck 2018 2018-09-04 COMM-USE N PMC6159564 30182916.0 10.4269/ajtmh.18-0219 5cxzc3z8 0.378541
65 Suzuki_2014 Vaccine Effectiveness against Medically Attended Laboratory-Confirmed Influenza in Japan, 2011–2012 Season Suzuki, Motoi; Minh, Le Nhat; Yoshimine, Hiroyuki; Inoue, Kenichiro; Yoshida, Lay Myint; Morimoto, Konosuke; Ariyoshi, Koya 2014 2014-02-13 COMM-USE N PMC3923823 24551167.0 10.1371/journal.pone.0088813 kkmv41en 0.377404 Sundaram_2013, Simpson_2016
66 Dia_N_2014 Influenza-Like Illnesses in Senegal: Not Only Focus on Influenza Viruses Dia, Ndongo; Diene Sarr, Fatoumata; Thiam, Diamilatou; Faye Sarr, Tening; Espié, Emmanuelle; OmarBa, Ibrahim; Coly, Malang; Niang, Mbayame; Richard, Vincent 2014 2014-03-27 COMM-USE N PMC3968133 24675982.0 10.1371/journal.pone.0093227 8n673xf9 0.371223
67 Nolan_2015 Prevalence and Incidence of Respiratory Syncytial Virus and Other Respiratory Viral Infections in Children Aged 6 Months to 10 Years With Influenza-like Illness Enrolled in a Randomized Trial Nolan, Terry; Borja-Tabora, Charissa; Lopez, Pio; Weckx, Lily; Ulloa-Gutierrez, Rolando; Lazcano-Ponce, Eduardo; Kerdpanich, Angkool; Weber, Miguel Angel Rodriguez; Mascareñas de Los Santos, Abiel; Tinoco, Juan-Carlos; Safadi, Marco Aurelio P.; Seng, Lim Fong; Hernandez-de Mezerville, Marcela; Faingezicht, Idis; Cruz-Valdez, Aurelio; Feng, Yang; Li, Ping; Durviaux, Serge; Haars, Gerco; Roy-Ghanta, Sumita; Vaughn, David W.; Taylor, Sylvia 2015 2015-06-01 NONCOMM N PMC4429758 25673560.0 10.1093/cid/civ065 aaglh001 0.369829 Azziz-Baumgartner_2012
68 KAYE_1975 SEROEPIDEMIOLOGIC SURVEY OF CORONAVIRUS (STRAIN 229E) INFECTIONS IN A POPULATION OF CHILDREN KAYE, H. S.; DOWDLE, W. R. 1975 1975-03-23 PMC N PMC7109799 1115061.0 10.1093/oxfordjournals.aje.a112091 5c944qki 0.363864
69 Khandaker_2012 Comparing the use of, and considering the need for, lumbar puncture in children with influenza or other respiratory virus infections Khandaker, Gulam; Heron, Leon; Rashid, Harunor; Li‐Kim‐Moy, Jean; Lester‐Smith, David; Kesson, Alison; McCaskill, Mary; Jones, Cheryl; Zurynski, Yvonne; Elliott, Elizabeth J.; Dwyer, Dominic E.; Booy, Robert 2012 2012-11-05 PMC N PMC4634251 23122417.0 10.1111/irv.12039 tgagwgpj 0.363319
70 Gröndahl_2013 The 2009 pandemic influenza A(H1N1) coincides with changes in the epidemiology of other viral pathogens causing acute respiratory tract infections in children Gröndahl, B.; Ankermann, T.; von Bismarck, P.; Rockahr, S.; Kowalzik, F.; Gehring, S.; Meyer, C.; Knuf, M.; Puppe, W. 2013 2013-10-23 PMC N PMC7100052 24150959.0 10.1007/s15010-013-0545-5 m445ucpp 0.359625
71 Levy_2015 Elevated transmission of upper respiratory illness among new recruits in military barracks in Thailand Levy, Jens W; Bhoomiboonchoo, Piraya; Simasathien, Sriluck; Salje, Henrik; Huang, Angkana; Rangsin, Ram; Jarman, Richard G; Fernandez, Stefan; Klungthong, Chonticha; Hussem, Kittinun; Gibbons, Robert V; Yoon, In-Kyu 2015 2015-10-13 COMM-USE N PMC4605412 26271648.0 10.1111/irv.12345 vyh77o4f 0.356260
72 Thomas_2014 Is influenza-like illness a useful concept and an appropriate test of influenza vaccine effectiveness? Thomas, Roger E. 2014 2014-04-17 PMC N PMC7127078 24582634.0 10.1016/j.vaccine.2014.02.059 6cj539uw 0.353418 Falsey_2014
73 Rudge_2019 “Epidemiology and aetiology of influenza-like illness among households in metropolitan Vientiane, Lao PDR”: A prospective, community-based cohort study Rudge, James W.; Inthalaphone, Nui; Pavlicek, Rebecca; Paboriboune, Phimpha; Flaissier, Bruno; Monidarin, Chou; Steenkeste, Nicolas; Davong, Viengmon; Vongsouvath, Manivanh; Bonath, K. A.; Messaoudi, Melinda; Saadatian-Elahi, Mitra; Newton, Paul; Endtz, Hubert; Dance, David; Paranhos Baccala, Glaucia; Sanchez Picot, Valentina 2019 2019-04-05 COMM-USE N PMC6450629 30951544.0 10.1371/journal.pone.0214207 zposfeh6 0.353087
74 Ridgway_2015 Influenza Among Afebrile and Vaccinated Healthcare Workers Ridgway, Jessica P.; Bartlett, Allison H.; Garcia-Houchins, Sylvia; Cariño, Sean; Enriquez, Aurea; Marrs, Rachel; Perez, Cynthia; Shah, Mona; Guenette, Caroline; Mosakowski, Steve; Beavis, Kathleen G.; Landon, Emily 2015 2015-06-01 PMC N PMC7108074 25733370.0 10.1093/cid/civ163 or6h6p9p 0.349783 Simpson_2016
75 Chakhunashvili_2018 Severe Acute Respiratory Infection (SARI) sentinel surveillance in the country of Georgia, 2015-2017 Chakhunashvili, Giorgi; Wagner, Abram L.; Power, Laura E.; Janusz, Cara B.; Machablishvili, Ann; Karseladze, Irakli; Tarkhan-Mouravi, Olgha; Zakhashvili, Khatuna; Imnadze, Paata; Gray, Gregory C.; Anderson, Benjamin; Boulton, Matthew L. 2018 2018-07-30 COMM-USE N PMC6066249 30059540.0 10.1371/journal.pone.0201497 gz46hzbi 0.343564 Sáez-López_2019
76 Lambert_2012 Observational Research in Childhood Infectious Diseases (ORChID): a dynamic birth cohort study Lambert, Stephen Bernard; Ware, Robert S; Cook, Anne L; Maguire, Frances A; Whiley, David M; Bialasiewicz, Seweryn; Mackay, Ian M; Wang, David; Sloots, Theo P; Nissen, Michael D; Grimwood, Keith 2012 2012-10-31 None N PMC3547315 23117571.0 10.1136/bmjopen-2012-002134 06e9lkwl 0.336708
77 Abedi_2019 Picornavirus etiology of acute infections among hospitalized infants Abedi, Glen R.; Messacar, Kevin; Luong, William; Nix, W. Allan; Rogers, Shannon; Queen, Krista; Tong, Suxiang; Oberste, M. Steven; Watt, James; Rothrock, Gretchen; Dominguez, Samuel; Gerber, Susan I.; Watson, John T. 2019 2019-07-31 PMC N 31100674.0 10.1016/j.jcv.2019.04.005 l5xcrql0 0.332722 Azziz-Baumgartner_2012
78 Haussig_2019 Feasibility study for the use of self‐collected nasal swabs to identify pathogens among participants of a population‐based surveillance system for acute respiratory infections (GrippeWeb‐Plus)—Germany, 2016 Haussig, Joana M.; Targosz, Angelina; Engelhart, Susanne; Herzhoff, Michael; Prahm, Kerstin; Buda, Silke; Nitsche, Andreas; Haas, Walter; Buchholz, Udo 2019 2019-03-29 COMM-USE N PMC6586186 30925029.0 10.1111/irv.12644 uapoeho2 0.332615
79 Machado_2020 Influenza A and B in a cohort of outpatient children and adolescent with influenza like-illness during two consecutive influenza seasons Machado, Clarisse M.; de Souza, Ana Carolina Mamana Fernandes; Romano, Camila Malta; dos Santos Freire, Wilton; Costa, Ângela Aparecida; Figueiredo, Walter Manso; Pannuti, Cláudio S.; Luna, Expedito J.A. 2020 2020-02-29 PMC N PMC7110568 31951818.0 10.1016/j.bjid.2019.12.005 x9azxi9m 0.329618 Simpson_2016
80 Williams_2010 Population-Based Incidence of Human Metapneumovirus in Hospitalized Children Williams, John V.; Edwards, Kathryn M.; Weinberg, Geoffrey A.; Griffin, Marie R.; Hall, Caroline B.; Zhu, Yuwei; Szilagyi, Peter G.; Wang, Chiaoyin K.; Yang, Chin-Fen; Silva, David; Ye, Dan; Spaete, Richard R.; Crowe, James E. 2010 2010-06-15 PMC N PMC2873123 20446850.0 10.1086/652782 7ft7wl7m 0.325201 Azziz-Baumgartner_2012
81 Lambert_2008 The cost of community-managed viral respiratory illnesses in a cohort of healthy preschool-aged children Lambert, Stephen B; Allen, Kelly M; Carter, Robert C; Nolan, Terence M 2008 2008-01-24 COMM-USE N PMC2266731 18215329.0 10.1186/1465-9921-9-11 hs3wfffs 0.319725
82 Falsey_2015 Acute Respiratory Tract Infection in Daycare Centers for Older Persons Falsey, Ann R.; McCann, Robert M.; Hall, William J.; Tanner, Martin A.; Criddle, Mary M.; Formica, Maria A.; Irvine, Carrie S.; Kolassa, John E.; Barker, William H.; Treanor, John J. 2015 2015-04-27 PMC N PMC7166334 7806736.0 10.1111/j.1532-5415.1995.tb06238.x zl1cr8jk 0.316663
83 McMorrow_2015 Severe Acute Respiratory Illness Deaths in Sub-Saharan Africa and the Role of Influenza: A Case Series From 8 Countries McMorrow, Meredith L.; Wemakoy, Emile Okitolonda; Tshilobo, Joelle Kabamba; Emukule, Gideon O.; Mott, Joshua A.; Njuguna, Henry; Waiboci, Lilian; Heraud, Jean-Michel; Rajatonirina, Soatianana; Razanajatovo, Norosoa H.; Chilombe, Moses; Everett, Dean; Heyderman, Robert S.; Barakat, Amal; Nyatanyi, Thierry; Rukelibuga, Joseph; Cohen, Adam L.; Cohen, Cheryl; Tempia, Stefano; Thomas, Juno; Venter, Marietjie; Mwakapeje, Elibariki; Mponela, Marcelina; Lutwama, Julius; Duque, Jazmin; Lafond, Kathryn; Nzussouo, Ndahwouh Talla; Williams, Thelma; Widdowson, Marc-Alain 2015 2015-09-15 PMC N PMC4826902 25712970.0 10.1093/infdis/jiv100 la23vxdt 0.312425 Azziz-Baumgartner_2012
84 Couch_2011 Prior Infections With Seasonal Influenza A/H1N1 Virus Reduced the Illness Severity and Epidemic Intensity of Pandemic H1N1 Influenza in Healthy Adults Couch, Robert B.; Atmar, Robert L.; Franco, Luis M.; Quarles, John M.; Niño, Diane; Wells, Janet M.; Arden, Nancy; Cheung, Sheree; Belmont, John W. 2011 2011-11-10 PMC N PMC3258274 22075792.0 10.1093/cid/cir809 y77c4ro4 0.311321 Simpson_2016
85 Rikin_2018 Assessment of temporally-related acute respiratory illness following influenza vaccination Rikin, Sharon; Jia, Haomiao; Vargas, Celibell Y.; Castellanos de Belliard, Yaritza; Reed, Carrie; LaRussa, Philip; Larson, Elaine L.; Saiman, Lisa; Stockwell, Melissa S. 2018 2018-04-05 PMC N PMC7115556 29525279.0 10.1016/j.vaccine.2018.02.105 bc30df2n 0.310322 Cowling_2012 Simpson_2016, Carvalho_2013
86 Iglesias_2018 Clinical-epidemiological study of Bordetella pertussis infection in the Gran Canaria island in the period, 2008–2016 Iglesias, Laura; Casabella Pernas, Antonio; Hernández Febles, Melisa; Colino Gil, Elena; Eisman Maraver, Alicia; Pena López, María José 2018 2018-09-30 PMC N 10.1016/j.anpede.2017.10.007 uwa0las6 0.308208 Azziz-Baumgartner_2012, Murray_2015
87 Miller_2007 Rhinovirus-Associated Hospitalizations in Young Children Miller, E. Kathryn; Lu, Xiaoyan; Erdman, Dean D.; Poehling, Katherine A.; Zhu, Yuwei; Griffin, Marie R.; Hartert, Tina V.; Anderson, Larry J.; Weinberg, Geoffrey A.; Hall, Caroline B.; Iwane, Marika K.; Edwards, Kathryn M. 2007 2007-03-15 PMC N PMC7109786 17299706.0 10.1086/511821 9afck5or 0.302388