Topic 02 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 39 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Shen_2011 The Infection of Chicken Tracheal Epithelial Cells with a H6N1 Avian Influenza Virus Shen, Ching-I; Wang, Ching-Ho; Shen, Shih-Cheng; Lee, Hsiu-Chin; Liao, Jiunn-Wang; Su, Hong-Lin 2011 2011-05-06 COMM-USE N PMC3089607 21573102.0 10.1371/journal.pone.0018894 fvfl0bn1 0.966818
2 Deng_2014 Human bocavirus 1 infects commercially available primary human airway epithelium cultures productively Deng, Xuefeng; Li, Yi; Qiu, Jianming 2014 2014-01-31 None N PMC3855471 24134939.0 10.1016/j.jviromet.2013.10.012 o7p60mey 0.927858 Park_2007
3 Chan_2009 Influenza H5N1 virus infection of polarized human alveolar epithelial cells and lung microvascular endothelial cells Chan, Michael CW; Chan, Renee WY; Yu, Wendy CL; Ho, Carol CC; Chui, WH; Lo, CK; Yuen, Kit M; Guan, Yi; Nicholls, John M; Peiris, JS Malik 2009 2009-10-30 COMM-USE N PMC2780994 19874627.0 10.1186/1465-9921-10-102 u49t8na9 0.879466
4 Punyadarsaniya_2015 Precision-cut intestinal slices as a culture system to analyze the infection of differentiated intestinal epithelial cells by avian influenza viruses Punyadarsaniya, Darsaniya; Winter, Christine; Mork, Ann-Kathrin; Amiri, Mahdi; Naim, Hassan Y.; Rautenschlein, Silke; Herrler, Georg 2015 2015-02-28 PMC N 25445801.0 10.1016/j.jviromet.2014.10.015 q9t8vwe7 0.833942
5 Trebbien_2011 Distribution of sialic acid receptors and influenza A virus of avian and swine origin in experimentally infected pigs Trebbien, Ramona; Larsen, Lars E; Viuff, Birgitte M 2011 2011-09-08 COMM-USE N PMC3177912 21902821.0 10.1186/1743-422x-8-434 4l3w9lb4 0.785377
6 Mahlakõiv_2015 Leukocyte-Derived IFN-α/β and Epithelial IFN-λ Constitute a Compartmentalized Mucosal Defense System that Restricts Enteric Virus Infections Mahlakõiv, Tanel; Hernandez, Pedro; Gronke, Konrad; Diefenbach, Andreas; Staeheli, Peter 2015 2015-04-07 COMM-USE N PMC4388470 25849543.0 10.1371/journal.ppat.1004782 y95g4354 0.770983
7 Wu_N_2016 The differentiated airway epithelium infected by influenza viruses maintains the barrier function despite a dramatic loss of ciliated cells Wu, Nai-Huei; Yang, Wei; Beineke, Andreas; Dijkman, Ronald; Matrosovich, Mikhail; Baumgärtner, Wolfgang; Thiel, Volker; Valentin-Weigand, Peter; Meng, Fandan; Herrler, Georg 2016 2016-12-22 COMM-USE N PMC5177954 28004801.0 10.1038/srep39668 vur1llau 0.748618
8 Kuiken_2004 Experimental Human Metapneumovirus Infection of Cynomolgus Macaques (Macaca fascicularis) Results in Virus Replication in Ciliated Epithelial Cells and Pneumocytes with Associated Lesions throughout the Respiratory Tract Kuiken, Thijs; van den Hoogen, Bernadette G.; van Riel, Debby A.J.; Laman, Jon D.; van Amerongen, Geert; Sprong, Leo; Fouchier, Ron A.M.; Osterhaus, Albert D.M.E. 2004 2004-06-23 PMC N PMC1615765 15161626.0 5ei7iwu0 0.719938 Kuiken_2004, Park_2007
9 Kuiken_2004 Experimental Human Metapneumovirus Infection of Cynomolgus Macaques (Macaca fascicularis) Results in Virus Replication in Ciliated Epithelial Cells and Pneumocytes with Associated Lesions throughout the Respiratory Tract Kuiken, Thijs; van den Hoogen, Bernadette G.; van Riel, Debby A.J.; Laman, Jon D.; van Amerongen, Geert; Sprong, Leo; Fouchier, Ron A.M.; Osterhaus, Albert D.M.E. 2004 2004-06-30 PMC N 15161626.0 10.1016/s0002-9440(10)63750-9 5ei7iwu0 0.698368 Kuiken_2004, Park_2007
10 Cox_E_1990 Intestinal replication of a porcine respiratory coronavirus closely related antigenically to the enteric transmissible gastroenteritis virus Cox, E.; Pensaert, M.B.; Callebaut, P.; van Deun, K. 1990 1990-06-30 PMC N PMC7117313 2169676.0 10.1016/0378-1135(90)90154-n gb37mvdt 0.698330 Park_2007, Debouck_1981, COX_E_1990
11 Sims_2008 SARS-CoV replication and pathogenesis in an in vitro model of the human conducting airway epithelium Sims, Amy C.; Burkett, Susan E.; Yount, Boyd; Pickles, Raymond J. 2008 2008-04-30 None N PMC2384224 17451829.0 10.1016/j.virusres.2007.03.013 qdwl8llw 0.679014 Park_2007
12 Barthold_1984 Mouse hepatitis virus strain — Related patterns of tissue tropism in suckling mice Barthold, S. W.; Smith, Abigail L. 1984 1984-01-01 PMC N PMC7086666 6331343.0 10.1007/bf01309300 rtek7v5g 0.676096 Park_2007
13 Te_N_2018 Co‐localization of Middle East respiratory syndrome coronavirus (MERS‐CoV) and dipeptidyl peptidase‐4 in the respiratory tract and lymphoid tissues of pigs and llamas Te, Nigeer; Vergara‐Alert, Júlia; Lehmbecker, Annika; Pérez, Mónica; Haagmans, Bart L.; Baumgärtner, Wolfgang; Bensaid, Albert; Segalés, Joaquim 2018 2018-12-28 NONCOMM N PMC7027813 30520548.0 10.1111/tbed.13092 9hll754i 0.656538 Park_2007, Meyerholz_2016
14 Narita_1991 Pathogenesis of Aujeszky's disease virus infection in swine tracheal organ culture Narita, M.; Imada, T.; Kobayashi, M. 1991 1991-11-30 PMC N PMC7130398 1663139.0 10.1016/s0021-9975(08)80113-2 6nejlcz2 0.655937 Park_2007, Debouck_1981
15 COX_E_1990 Sites of replication of a porcine respiratory coronavirus related to transmissible gastroenteritis virus COX, E.; HOOYBERGHS, J.; PENSAERT, M.B. 1990 1990-03-31 PMC N PMC7130871 2159175.0 10.1016/s0034-5288(18)30984-6 umb1ld7v 0.618084 Park_2007, Debouck_1981
16 Yang_2014 A Beneficiary Role for Neuraminidase in Influenza Virus Penetration through the Respiratory Mucus Yang, Xiaoyun; Steukers, Lennert; Forier, Katrien; Xiong, Ranhua; Braeckmans, Kevin; Van Reeth, Kristien; Nauwynck, Hans 2014 2014-10-15 COMM-USE N PMC4198190 25333824.0 10.1371/journal.pone.0110026 779czzzx 0.583328
17 Han_X_2019 Mimicking the passage of avian influenza viruses through the gastrointestinal tract of chickens Han, Xuejiao; Bertzbach, Luca D.; Veit, Michael 2019 2019-12-31 PMC N PMC7126190 31767100.0 10.1016/j.vetmic.2019.108462 pdet5di7 0.522849 Park_2007, Debouck_1981
18 Zhou_2017 Human intestinal tract serves as an alternative infection route for Middle East respiratory syndrome coronavirus Zhou, Jie; Li, Cun; Zhao, Guangyu; Chu, Hin; Wang, Dong; Yan, Helen Hoi-Ning; Poon, Vincent Kwok-Man; Wen, Lei; Wong, Bosco Ho-Yin; Zhao, Xiaoyu; Chiu, Man Chun; Yang, Dong; Wang, Yixin; Au-Yeung, Rex K. H.; Chan, Ivy Hau-Yee; Sun, Shihui; Chan, Jasper Fuk-Woo; To, Kelvin Kai-Wang; Memish, Ziad A.; Corman, Victor M.; Drosten, Christian; Hung, Ivan Fan-Ngai; Zhou, Yusen; Leung, Suet Yi; Yuen, Kwok-Yung 2017 2017-11-15 NONCOMM N PMC5687858 29152574.0 10.1126/sciadv.aao4966 dck3ecdd 0.506330 Park_2007, Sims_2008
19 Dervas_2020 Python nidoviruses, more than respiratory pathogens Eva Dervas; Jussi Hepojoki; Teemu Smura; Barbara Prähauser; Katharina Windbichler; Sandra Blumich; Antonio Ramis; Udo Hetzel; Anja Kipar 2020 2020-04-13 BioRxiv N 10.1101/2020.04.10.036640 alhfsdu0 0.491132 Park_2007
20 Bridger_1978 Replication of an enteric bovine coronavirus in intestinal organ cultures Bridger, Janice C.; Caul, E. O.; Egglestone, S. I. 1978 1978-01-01 PMC N PMC7087085 655865.0 10.1007/bf01315636 865r9l11 0.479338 Park_2007, Stott_1976, Debouck_1981
21 Mossel_2008 SARS-CoV replicates in primary human alveolar type II cell cultures but not in type I-like cells Mossel, Eric C.; Wang, Jieru; Jeffers, Scott; Edeen, Karen E.; Wang, Shuanglin; Cosgrove, Gregory P.; Funk, C. Joel; Manzer, Rizwan; Miura, Tanya A.; Pearson, Leonard D.; Holmes, Kathryn V.; Mason, Robert J. 2008 2008-03-01 PMC N PMC2312501 18022664.0 10.1016/j.virol.2007.09.045 rhphldyp 0.478297 Harcourt_2011
22 Harcourt_2011 Evaluation of the Calu-3 cell line as a model of in vitro respiratory syncytial virus infection Harcourt, Jennifer L.; Caidi, Hayat; Anderson, Larry J.; Haynes, Lia M. 2011 2011-06-30 PMC N PMC7112923 21458491.0 10.1016/j.jviromet.2011.03.027 ghbpga1s 0.449943 Chan_2009
23 Haverkamp_2018 Experimental infection of dromedaries with Middle East respiratory syndrome-Coronavirus is accompanied by massive ciliary loss and depletion of the cell surface receptor dipeptidyl peptidase 4 Haverkamp, Ann-Kathrin; Lehmbecker, Annika; Spitzbarth, Ingo; Widagdo, Widagdo; Haagmans, Bart L.; Segalés, Joaquim; Vergara-Alert, Julia; Bensaid, Albert; van den Brand, Judith M. A.; Osterhaus, Albert D. M. E.; Baumgärtner, Wolfgang 2018 2018-06-27 COMM-USE N PMC6021449 29950581.0 10.1038/s41598-018-28109-2 kxivgxbg 0.436162 Park_2007
24 Benyeda_2010 Comparative Histopathology and Immunohistochemistry of QX-like, Massachusetts and 793/B Serotypes of Infectious Bronchitis Virus Infection in Chickens Benyeda, Zs.; Szeredi, L.; Mató, T.; Süveges, T.; Balka, Gy.; Abonyi-Tóth, Zs.; Rusvai, M.; Palya, V. 2010 2010-11-30 PMC N PMC7127812 20570279.0 10.1016/j.jcpa.2010.04.007 4najfyl5 0.433285
25 Afzelius_1994 Ultrastructure of human nasal epithelium during an episode of coronavirus infection Afzelius, B. A. 1994 1994-01-01 PMC N PMC7087561 8186894.0 10.1007/bf00194614 4od8qt36 0.422309 Horváth_1981
26 Cong_2015 Porcine aminopeptidase N mediated polarized infection by porcine epidemic diarrhea virus in target cells Cong, Yingying; Li, Xiaoxue; Bai, Yunyun; Lv, Xiaonan; Herrler, Georg; Enjuanes, Luis; Zhou, Xingdong; Qu, Bo; Meng, Fandan; Cong, Chengcheng; Ren, Xiaofeng; Li, Guangxing 2015 2015-04-30 PMC N PMC7112081 25681796.0 10.1016/j.virol.2015.01.020 q8o3311y 0.411080
27 Stott_1976 Replication of a bovine coronavirus in organ cultures of foetal trachea Stott, E.J.; Thomas, L.H.; Bridger, J.C.; Jebbett, N.J. 1976 1976-07-31 PMC N PMC7117282 10.1016/0378-1135(76)90010-9 ore3r4m3 0.410552 Bridger_1978
28 Bhatt_1977 Experimental infection of adult axenic rats with Parker's Rat Coronavirus Bhatt, P. N.; Jacoby, R. O. 1977 1977-01-01 PMC N PMC7086747 907478.0 10.1007/bf01314779 ftzjdvfj 0.409968 Park_2007
29 Hess_1987 Temporal events in the invasion of the codling moth, Cydia pomonella, by a granulosis virus: An electron microscope study Hess, Roberta T.; Falcon, L.A. 1987 1987-09-30 PMC N PMC7130536 10.1016/0022-2011(87)90108-x ctqt544y 0.401389
30 Thomas_1987 Growth of Mycoplasma bovis in organ cultures of bovine foetal trachea and comparison with Mycoplasma dispar Thomas, L.H.; Howard, C.J.; Parsons, K.R.; Anger, H.S. 1987 1987-02-28 PMC N PMC7117133 3551320.0 10.1016/0378-1135(87)90044-7 acbo4zs2 0.400926 Wu_N_2016
31 Bukreyev_2009 Chimeric human parainfluenza virus bearing the Ebola virus glycoprotein as the sole surface protein is immunogenic and highly protective against Ebola virus challenge Bukreyev, Alexander; Marzi, Andrea; Feldmann, Friederike; Zhang, Liqun; Yang, Lijuan; Ward, Jerrold M.; Dorward, David W.; Pickles, Raymond J.; Murphy, Brian R.; Feldmann, Heinz; Collins, Peter L. 2009 2009-01-01 PMC N PMC2649782 19010509.0 10.1016/j.virol.2008.09.030 sxlclatt 0.399050
32 Zhang_2009 Systemic infection of avian influenza A virus H5N1 subtype in humans Zhang, Zengfeng; Zhang, Jinxia; Huang, Kai; Li, Kang-Sheng; Yuen, Kwok-Yung; Guan, Yi; Chen, Honglin; Ng, Wai Fu 2009 2009-05-31 PMC N PMC7112124 19121843.0 10.1016/j.humpath.2008.08.015 7scpuf3o 0.392369 Park_2007
33 Griggs_2017 Rhinovirus C targets ciliated airway epithelial cells Griggs, Theodor F.; Bochkov, Yury A.; Basnet, Sarmila; Pasic, Thomas R.; Brockman-Schneider, Rebecca A.; Palmenberg, Ann C.; Gern, James E. 2017 2017-05-04 COMM-USE N PMC5418766 28472984.0 10.1186/s12931-017-0567-0 uzs5qkxe 0.360503
34 Narita_1982 Electron microscopy of the intestine of gnotobiotic piglets infected with porcine rotavirus Narita, M.; Fukusho, A.; Shimizu, Y. 1982 1982-10-31 PMC N PMC7130348 6296207.0 10.1016/0021-9975(82)90011-1 7sxioviw 0.359710 Afzelius_1994 Horváth_1981
35 Caul_1975 CORONAVIRUS PROPAGATED FROM PATIENT WITH NON-BACTERIAL GASTROENTERITIS Caul, E.O.; Clarke, S.K.R. 1975 1975-11-15 PMC N PMC7135454 53434.0 10.1016/s0140-6736(75)90363-3 h51cebpe 0.340357 Bridger_1978, Cong_2015 Park_2007
36 Harcourt_2013 Establishing a Liquid-covered Culture of Polarized Human Airway Epithelial Calu-3 Cells to Study Host Cell Response to Respiratory Pathogens In vitro Harcourt, Jennifer L.; Haynes, Lia M. 2013 2013-02-07 PMC N PMC3600762 23426201.0 10.3791/50157 2nsmr399 0.314866 Harcourt_2011, Wu_N_2016 Harcourt_2011
37 Caul_1977 Further studies on human enteric coronaviruses Caul, E. O.; Egglestone, S. I. 1977 1977-01-01 PMC N PMC7087196 196571.0 10.1007/bf01314383 l9rh8xz7 0.312222 Park_2007
38 Gupta_2013 The Neonatal Fc Receptor (FcRn) Enhances Human Immunodeficiency Virus Type 1 (HIV-1) Transcytosis across Epithelial Cells Gupta, Sandeep; Gach, Johannes S.; Becerra, Juan C.; Phan, Tran B.; Pudney, Jeffrey; Moldoveanu, Zina; Joseph, Sarah B.; Landucci, Gary; Supnet, Medalyn Jude; Ping, Li-Hua; Corti, Davide; Moldt, Brian; Hel, Zdenek; Lanzavecchia, Antonio; Ruprecht, Ruth M.; Burton, Dennis R.; Mestecky, Jiri; Anderson, Deborah J.; Forthal, Donald N. 2013 2013-11-21 COMM-USE N PMC3836734 24278022.0 10.1371/journal.ppat.1003776 sxohecoi 0.304140
39 Khatri_2011 Epithelial Cells Derived from Swine Bone Marrow Express Stem Cell Markers and Support Influenza Virus Replication In Vitro Khatri, Mahesh; Saif, Yehia M. 2011 2011-12-22 COMM-USE N PMC3245290 22216319.0 10.1371/journal.pone.0029567 7ip36gt1 0.300753 Harcourt_2011