1 |
phylogenetic |
amino |
genome |
IBV |
chickens |
PEDV |
canine |
influenza |
PCR |
M41 |
TGEV |
bcov |
astrovirus |
bat |
- |
2 |
analysis |
acid |
recombination |
S1 |
attenuated |
porcine |
dogs |
flocks |
reaction |
beaudette |
tcov |
respiratory |
rotavirus |
bats |
version |
3 |
sequences |
% |
complete |
bronchitis |
vaccines |
pdcov |
samples |
broiler |
chain |
cells |
coronavirus |
hcov-oc43 |
segments |
SARS |
online |
4 |
molecular |
nucleotide |
sequence |
infectious |
protection |
diarrhea |
fecal |
broilers |
reverse |
binding |
turkey |
bovine |
astroviruses |
sars-cov |
users |
5 |
genotypes |
amino acid |
genomic |
infectious bronchitis virus |
eggs |
epidemic |
fecal samples |
birds |
polymerase |
expressing |
orfs |
crcov |
castv |
mers-cov |
supplementary |
6 |
circulating |
sequence |
genome sequence |
s1 gene |
lesions |
piglets |
cats |
farms |
RT-PCR |
IBV |
coronaviruses |
bovine coronavirus |
segment |
syndrome |
ELECTRONIC |
7 |
genotype |
protein |
strain |
ibvs |
embryonated |
pigs |
ccov |
avian |
primers |
recombinant |
PRRSV |
BRSV |
reovirus |
WNV |
online version |
8 |
genetic |
sequences |
genes |
vaccine |
chicks |
strains |
CPV |
backyard |
samples |
mabs |
transmissible |
EV71 |
PBV |
human |
SUPPLEMENTARY |
9 |
diversity |
identity |
recombinant |
massachusetts |
vaccine |
CV777 |
% |
% |
method |
avirulent |
ORF |
× |
rotaviruses |
middle |
authorized |
10 |
study |
strains |
virus |
strains |
passage |
PED |
VP2 |
wild |
transcription |
in vitro |
turkey coronavirus |
patients |
RVA |
covs |
MATERIAL |
11 |
data |
compared |
3′ |
variants |
kidney |
epidemic diarrhea virus |
feline |
NDV |
detection |
virulent |
CCV |
bcovs |
orthoreovirus |
2019-ncov |
material |
12 |
lineages |
isolates |
genomes |
4/91 |
IBV |
china |
diarrheic |
wild birds |
assay |
vaccinia |
transmissible gastroenteritis virus |
HMPV |
reoviruses |
east |
article |
13 |
lineage |
gene |
determined |
mass |
vaccinated |
pedvs |
ptov |
iran |
CDV |
vitro |
protein |
adult |
species |
arabia |
doi:10.1007/s00705 |
14 |
epidemiology |
amino acid sequence |
full-length |
poultry |
challenge |
swine |
VP1 |
poultry |
RFLP |
cdna |
FIPV |
children |
VP7 |
saudi |
01 |
15 |
cases |
acids |
report |
qx-like |
SPF |
ORF3 |
rdrp |
H9N2 |
sensitive |
ribvs |
3b |
WD |
genogroup |
saudi arabia |
FHV-1 |
16 |
evolution |
amino acids |
region |
emergence |
passages |
g2b |
CPV-2 |
ORT |
developed |
expression |
PRCV |
enteric |
chicken astrovirus |
bufavirus |
019 |
17 |
spread |
published |
5′ |
field |
trachea |
diarrhoea |
dog |
commercial |
detect |
genetics |
229E |
human |
BRV |
acute respiratory syndrome |
isolates |
18 |
clustered |
nucleotide sequence |
isolated |
vaccine strains |
kidneys |
outbreaks |
btov |
AIV |
products |
vaccinia virus |
gastroenteritis |
hcov-nl63 |
BTV-3 |
JEV |
TBTV |
19 |
characterization |
korean |
analyses |
isolates |
signs |
porcine deltacoronavirus |
bnov |
ampv |
amplified |
attachment |
miller |
horses |
pbvs |
camel |
ma5 |
20 |
strains |
conserved |
structural |
IB |
live |
vietnam |
ccov-i |
flock |
polymerase chain reaction |
vero |
3a |
bcov strains |
genome segments |
coronaviruses |
016 |
21 |
years |
deduced |
events |
flocks |
egg |
field |
capsid |
IBDV |
methods |
beaur-m41(s |
ORF7 |
mebus |
EV-G |
coronavirus |
015 |
22 |
italy |
amino acid sequences |
gene |
industry |
infection |
korea |
norovirus |
HA |
amplify |
ovo |
purdue |
dairy |
reassortant |
cov |
0 |
23 |
epidemiological |
aa |
event |
GI-19 |
strain |
INDEL |
PCV3 |
bird |
restriction |
vero cells |
open reading frames |
calves |
RSS |
dromedary |
10.1007/s00705 |
24 |
time |
residues |
viruses |
viruses |
embryo |
deltacoronavirus |
kobuvirus |
disease |
fragment |
beaudette strain |
SD |
hcov-229e |
orthoreoviruses |
sars-like |
doi:10.1007/s11262 |
25 |
china |
substitutions |
suggested |
H120 |
clinical signs |
pig |
nov |
mixed |
rapid |
activity |
ORF4 |
bocv |
MRV |
shrimp |
02 |
26 |
present |
proteins |
nucleotides |
ark |
mortality |
DR13 |
cakv |
pathogens |
RT‐PCR |
newcastle |
frames |
hadv |
cattle |
2019‐ncov |
korean ibv |
27 |
selection |
strain |
end |
chickens |
immune |
south korea |
cbov |
IBV |
amplification |
proteins |
open |
hadv-b14 |
NS-1 |
middle east respiratory syndrome coronavirus |
017 |
28 |
worldwide |
homology |
comparative |
conn |
birds |
chinese |
fcov |
broiler farms |
multiplex |
reverse genetics system |
MHV |
hcov-hku1 |
sivs |
usage |
CA16 |
29 |
evolutionary |
encoding |
identified |
virus |
days |
variant |
prevalence |
backyard chickens |
curve |
blot |
FECV |
outbreak |
reassortment |
codon |
018 |
30 |
studies |
genes |
parental |
vaccination |
embryos |
G2 |
kobuviruses |
ILTV |
reverse transcription polymerase chain reaction |
S1 |
ORF5 |
cattle |
tastv-2 |
camels |
mahed |
31 |
detected |
site |
similarity |
serotypes |
inoculated |
deletion |
strains |
MG |
positive |
NDV |
MHV-A59 |
illness |
goose |
HBV |
PIV5 |
32 |
isolates |
revealed |
orf1a |
gene |
nephropathogenic |
south |
rna-dependent |
exposure |
typing |
infectious |
5a |
dysentery |
ANV |
reservoirs |
HLJ-073 |
33 |
population |
level |
untranslated |
hypervariable |
tissue |
spike |
fekov |
exposure to |
diagnosis |
protein |
ferret |
bcov. |
mrvs |
papillomavirus |
non-korean ibv strains |
34 |
2010 |
region |
recombinants |
recombination |
virus |
mexico |
noroviruses |
agents |
field samples |
ark99 |
tcov. |
BPIV3 |
NC98 |
dromedaries |
cynos |
35 |
phylogenetic analysis |
contained |
evolution |
infectious bronchitis viruses |
challenged |
pandemic |
btovs |
immunosorbent |
identification |
CAM |
poults |
coronavirus |
condition |
clade |
NC1 |
36 |
italian |
sequenced |
UTR |
793B |
attenuation |
strain |
ccov-ii |
aavv‐6 |
test |
virus |
enteritis |
RBCV |
rpmrv-yn2012 |
ratg13 |
10.1186/s12917 |
37 |
asia |
substitution |
organization |
genotype |
chicken |
suckling |
positive |
seropositive |
pcr products |
spike |
3c |
EV-D68 |
rvas |
scovs |
03 |
38 |
revealed |
m gene |
additional |
isolated |
clinical |
orf3 genes |
CV |
respiratory |
differential |
rescued |
spike |
ireland |
rab1404 |
horseshoe |
doi:10.1186/s12985 |
39 |
january |
domains |
closely |
showed |
inoculation |
epidemic diarrhoea virus |
bovine |
mycoplasma |
reverse-transcription |
hrluc |
type |
C1 |
tastv |
16BO133 |
ESA |
40 |
pressure |
showed |
analysis |
TW |
infected |
orf3 gene |
vp2 gene |
H9 |
real‐time |
KM22 |
FCV |
EBCV |
goslings |
bartonella |
PL/G032/2015 |
41 |
variability |
cleavage |
kb |
GI-13 |
day |
epidemic diarrhea |
femv |
sonali |
serotypes |
bind |
TCV |
hadv-7 |
avian‐like |
sarsr-covs |
united |
42 |
results |
analysis |
genetic |
JMK |
pathogenicity |
jeju |
ccov-iia |
virus |
sensitivity |
chicken |
FRECV |
ARD |
G9 |
zoo |
leading |
43 |
bayesian |
phylogenetic |
coronaviridae |
DPI |
titers |
pdcov strains |
cpv-2c |
tracheal swabs |
ECE |
subunit |
4b |
ecov |
humans |
bat species |
united states |
44 |
southern |
chinju99 |
isolate |
GI-23 |
viral |
chinese pedv |
felv |
AI |
degenerate |
peptides |
reading |
hexon |
genus |
respiratory |
states |
45 |
disease |
peptide |
simplot |
mass-type |
responses |
central china |
nevs |
enzyme-linked |
HRM |
rational |
european |
10−4 |
group |
acute |
RESULTS |
46 |
geographical |
group |
genomic sequences |
s1 gene sequences |
serial |
piglet |
aichivirus |
acovs |
restriction fragment length polymorphism |
modifications |
ferrets |
ARI |
2 |
bat-cov |
psvs |
47 |
geographic |
isolated |
sequences |
spike |
bronchitis |
g2a |
savs |
infections |
faecal samples |
ribv |
fipv type i |
ERBV3 |
K71 |
mers-covs |
rdrp-coding |
48 |
year |
- |
structural genes |
GI-1 |
protective |
henan |
study |
bursal |
obtained |
rndv |
structures |
10−3 |
constellation |
severe |
doi:10.1007/s13337 |
49 |
spreading |
br1/87 |
genetic recombination |
GVI-1 |
infectious |
swine industry |
diarrhea |
backyard flocks |
RNA |
ectodomain |
respiratory syndrome virus |
beijing |
σ1 |
UAE |
cluster |
50 |
viral |
amino acid residues |
showed |
cross-neutralization |
lungs |
PKV |
collected |
variant 2 |
sequencing |
embryonic |
ontario |
prototype |
K5 |
arab |
evidence |