Topic 02 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 02 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Nascimento-Carvalho_2018 Respiratory viruses among children with non-severe community-acquired pneumonia: A prospective cohort study Nascimento-Carvalho, Amanda C.; Vilas-Boas, Ana-Luisa; Fontoura, Maria-Socorro H.; Vuorinen, Tytti; Nascimento-Carvalho, Cristiana M. 2018 2018-08-31 PMC N PMC7106541 29908521.0 10.1016/j.jcv.2018.06.003 ghox6gur 0.684377 Choi_2017, Sun_H_2018, Wu_Z_2017
2 Fathima_2012 Use of an Innovative Web-Based Laboratory Surveillance Platform to Analyze Mixed Infections Between Human Metapneumovirus (hMPV) and Other Respiratory Viruses Circulating in Alberta (AB), Canada (2009–2012) Fathima, Sumana; Lee, Bonita E.; May-Hadford, Jennifer; Mukhi, Shamir; Drews, Steven J. 2012 2012-11-05 COMM-USE N PMC3509671 23202503.0 10.3390/v4112754 bh5csogu 0.665007 Choi_2017
3 Messacar_2013 Rhino/enteroviruses in hospitalized children: A comparison to influenza viruses Messacar, Kevin; Robinson, Christine C.; Bagdure, Dayanand; Curtis, Donna J.; Glodé, Mary P.; Dominguez, Samuel R. 2013 2013-01-31 PMC N 23078869.0 10.1016/j.jcv.2012.09.012 5bxzejzq 0.622443 Sun_H_2018, Choi_2017, Wu_Z_2017
4 Benkouiten_2013 Circulation of Respiratory Viruses Among Pilgrims During the 2012 Hajj Pilgrimage Benkouiten, Samir; Charrel, Rémi; Belhouchat, Khadidja; Drali, Tassadit; Salez, Nicolas; Nougairede, Antoine; Zandotti, Christine; Memish, Ziad A.; al Masri, Malak; Gaillard, Catherine; Parola, Philippe; Brouqui, Philippe; Gautret, Philippe 2013 2013-10-01 PMC N PMC7108031 23839997.0 10.1093/cid/cit446 v9t2b2ca 0.610003
5 Freymuth_1998 Épidémiologie de l'infection virale et asthme Freymuth, F.; Vabret, A.; Brouard, J.; Duhamel, J.F.; Guillois, B.; Petitjean, J.; Gennetay, E.; Gouarin, S.; Proust, C. 1998 1998-12-31 PMC N PMC7143695 10.1016/s0335-7457(98)80048-8 1li3r9pk 0.607654 Choi_2017
6 Assane_2018 Viral and Bacterial Etiologies of Acute Respiratory Infections Among Children Under 5 Years in Senegal Assane, Dieng; Makhtar, Camara; Abdoulaye, Diop; Amary, Fall; Djibril, Boiro; Amadou, Diop; Niokhor, Diouf Jean Baptiste; Amadou, Diop; Cheikh, Loucoubar; Ndongo, Dia; Mbayame, Niang; Lamine, Fall; Bouh, Boye Cheikh Saad 2018 2018-02-13 NONCOMM N PMC5815418 29467579.0 10.1177/1178636118758651 qduf08kp 0.602461 Choi_2017, Sun_H_2018, Koon_2010, Paul_2019
7 Sun_H_2018 Impact of RSV Coinfection on Human Bocavirus in Children with Acute Respiratory Infections Sun, Huiming; Sun, Jiyang; Ji, Wei; Hao, Chuangli; Yan, Yongdong; Chen, Zhengrong; Wang, Yuqing 2018 2018-09-06 PMC N PMC7107312 30202992.0 10.1093/tropej/fmy057 rt9xvfwy 0.600695 Choi_2017, Wu_Z_2017
8 Li_Y_2019 The spectrum of viral pathogens in children with severe acute lower respiratory tract infection: A 3‐year prospective study in the pediatric intensive care unit Li, Ya‐Ting; Liang, Ying; Ling, Ye‐Sheng; Duan, Meng‐Qi; Pan, Li; Chen, Zhuang‐Gui 2019 2019-06-13 PMC N PMC7167151 31081548.0 10.1002/jmv.25502 2ufmeebh 0.593011 Choi_2017, Sun_H_2018
9 Chung_2006 Bocavirus Infection in Hospitalized Children, South Korea Chung, Ju-Young; Han, Tae Hee; Kim, Chang Keun; Kim, Sang Woo 2006 2006-08-23 PMC N PMC3291229 16965708.0 10.3201/eid1208.060261 9eu0g1tw 0.590891 Choi_2017
10 Khamis_2012 Epidemiology of respiratory virus infections among infants and young children admitted to hospital in Oman Khamis, F.A.; Al‐Kobaisi, M.F.; Al‐Areimi, W.S.; Al‐Kindi, H.; Al‐Zakwani, I. 2012 2012-06-18 PMC N PMC7166482 22711362.0 10.1002/jmv.23330 ohir61mb 0.583776 Sun_H_2018, Choi_2017, Bastien_2006
11 Choi_2006 The Association of Newly Identified Respiratory Viruses with Lower Respiratory Tract Infections in Korean Children, 2000–2005 Choi, Eun Hwa; Lee, Hoan Jong; Kim, Sun Jung; Eun, Byung Wook; Kim, Nam Hee; Lee, Jin A; Lee, Jun Ho; Song, Eun Kyung; Park, So Hee Kim1 Ji Yong; Sung, Ji Yeon 2006 2006-09-01 PMC N PMC7107986 16886150.0 10.1086/506350 pbnnp9i1 0.563210 Choi_2017
12 Zimmerman_2015 Viral infections in outpatients with medically attended acute respiratory illness during the 2012–2013 influenza season Zimmerman, Richard K; Rinaldo, Charles R; Nowalk, Mary Patricia; Balasubramani, GK; Moehling, Krissy K; Bullotta, Arlene; Eng, Heather F; Raviotta, Jonathan M; Sax, Theresa M; Wisniewski, Stephen 2015 2015-02-22 COMM-USE N PMC4344779 25887948.0 10.1186/s12879-015-0806-2 ga7dh4nv 0.538527 Sun_H_2018, Choi_2017, Bastien_2006, Wu_Z_2017, Khamis_2012
13 Bhuyan_2017 Bacterial and viral pathogen spectra of acute respiratory infections in under-5 children in hospital settings in Dhaka city Bhuyan, Golam Sarower; Hossain, Mohammad Amir; Sarker, Suprovath Kumar; Rahat, Asifuzzaman; Islam, Md Tarikul; Haque, Tanjina Noor; Begum, Noorjahan; Qadri, Syeda Kashfi; Muraduzzaman, A. K. M.; Islam, Nafisa Nawal; Islam, Mohammad Sazzadul; Sultana, Nusrat; Jony, Manjur Hossain Khan; Khanam, Farhana; Mowla, Golam; Matin, Abdul; Begum, Firoza; Shirin, Tahmina; Ahmed, Dilruba; Saha, Narayan; Qadri, Firdausi; Mannoor, Kaiissar 2017 2017-03-27 COMM-USE N PMC5367831 28346512.0 10.1371/journal.pone.0174488 7gkdday2 0.533707 Choi_2017, Koon_2010, Paul_2019, Sun_H_2018
14 Chang_2014 Viral infections associated with Kawasaki disease Chang, Luan-Yin; Lu, Chun-Yi; Shao, Pei-Lan; Lee, Ping-Ing; Lin, Ming-Tai; Fan, Tsui-Yien; Cheng, Ai-Ling; Lee, Wan-Ling; Hu, Jen-Jan; Yeh, Shu-Jen; Chang, Chien-Chih; Chiang, Bor-Luen; Wu, Mei-Hwan; Huang, Li-Min 2014 2014-03-31 PMC N PMC7125523 24495555.0 10.1016/j.jfma.2013.12.008 n5lg43tr 0.528089 Choi_2017, Sun_H_2018, Wu_Z_2017, Bastien_2006
15 Esposito_2011 Impact of rhinoviruses on pediatric community-acquired pneumonia Esposito, Susanna; Daleno, Cristina; Tagliabue, Claudia; Scala, Alessia; Tenconi, Rossana; Borzani, Irene; Fossali, Emilio; Pelucchi, Claudio; Piralla, Antonio; Principi, Nicola 2011 2011-11-29 PMC N PMC7088072 22124536.0 10.1007/s10096-011-1487-4 1e7bn0u7 0.523057 Choi_2017, Bastien_2006, Sun_H_2018, Kaplan_2006
16 Lieberman_2010 Respiratory Viruses in Adults With Community-Acquired Pneumonia Lieberman, David; Shimoni, Avi; Shemer-Avni, Yonat; Keren-Naos, Ayelet; Shtainberg, Rachel; Lieberman, Devora 2010 2010-10-31 PMC N PMC7094496 20363845.0 10.1378/chest.09-2717 l5jfqr9q 0.521988 Choi_2017, Bastien_2006, Sun_H_2018, Kaplan_2006
17 Chan_2007 Detection of Human Metapneumovirus in Hospitalized Children with Acute Respiratory Tract Infection Using Real-time RT-PCR in a Hospital in Northern Taiwan Chan, Pei-Chun; Wang, Chung-Yi; Wu, Ping-Sheng; Chang, Po-Young; Yang, Tsao-Ton; Chiang, Yu-Ping; Kao, Chuan-Liang; Chang, Luan-Yin; Lu, Chun-Yi; Lee, Ping-Ing; Chen, Jung-Min; Shao, Pei-Lan; Huang, Fu-Yuan; Lee, Chin-Yun; Huang, Li-Min 2007 2007-12-31 PMC N 17282966.0 10.1016/s0929-6646(09)60211-4 1utquwfy 0.521938 Sun_H_2018, Choi_2017
18 Balinandi_2013 The viral aetiology of influenza-like illnesses in Kampala and Entebbe, Uganda, 2008 Balinandi, Stephen; Bakamutumaho, Barnabas; Kayiwa, John T.; Ongus, Juliette; Oundo, Joseph; Awor, Anna C.; Lutwama, Julius J. 2013 2013-06-24 COMM-USE N PMC5637772 29043164.0 10.4102/ajlm.v2i1.65 1m9b8tph 0.520054 Choi_2017
19 Ghietto_2012 High prevalence of human bocavirus 1 in infants with lower acute respiratory tract disease in Argentina, 2007 – 2009 Ghietto, Lucía María; Cámara, Alicia; Zhou, Yumei; Pedranti, Mauro; Ferreyra, Silvia; Frey, Teryl; Cámara, Jorge; Adamo, Maria Pilar 2012 2012-02-29 PMC N PMC7129757 22358354.0 10.1016/s1413-8670(12)70272-6 s56mpyc1 0.509234 Choi_2017
20 Johnstone_2008 Viral Infection in Adults Hospitalized With Community-Acquired Pneumonia Prevalence, Pathogens, and Presentation Johnstone, Jennie; Majumdar, Sumit R.; Fox, Julie D.; Marrie, Thomas J. 2008 2008-12-31 PMC N PMC7094572 18689592.0 10.1378/chest.08-0888 g95skuik 0.502794 Choi_2017, Sun_H_2018
21 Chowdhury_2020 Viral etiology of pneumonia among severely malnourished under-five children in an urban hospital, Bangladesh Chowdhury, Fahmida; Shahid, Abu Sadat Mohammad Sayeem Bin; Ghosh, Probir Kumar; Rahman, Mustafizur; Hassan, Md. Zakiul; Akhtar, Zubair; Muneer, S. Mah-E-; Shahrin, Lubaba; Ahmed, Tahmeed; Chisti, Mohammod Jobayer 2020 2020-02-04 COMM-USE N PMC6999894 32017782.0 10.1371/journal.pone.0228329 f8oeuw5g 0.495578 Choi_2017, Sun_H_2018, Muniz-Rodriguez_2020
22 Choi_2017 Laboratory-based surveillance of hospital-acquired respiratory virus infection in a tertiary care hospital Choi, Hye-Suk; Kim, Mi-Na; Sung, Heungsup; Lee, Jeong-Young; Park, Hee-Youn; Kwak, Sun-Hee; Lim, Young-Ju; Hong, Min-Jee; Kim, Sun-Kyung; Park, So-Yeon; Kim, Hyeon-Jeong; Kim, Kyu-Ri; Choi, Hye-Ran; Jeong, Jae Sim; Choi, Sang-Ho 2017 2017-05-01 None N PMC7124227 28214160.0 10.1016/j.ajic.2017.01.009 q356npb7 0.491621 Sun_H_2018
23 Tsagarakis_2018 Age-related prevalence of common upper respiratory pathogens, based on the application of the FilmArray Respiratory panel in a tertiary hospital in Greece Tsagarakis, Nikolaos J.; Sideri, Anthi; Makridis, Panagiotis; Triantafyllou, Argyro; Stamoulakatou, Alexandra; Papadogeorgaki, Eleni 2018 2018-06-01 NONCOMM N PMC6392546 29851817.0 10.1097/md.0000000000010903 nt0tf60j 0.482224 Sun_H_2018, Choi_2017, Bastien_2006, Koon_2010
24 Meligy_2016 Detection of viral acute lower respiratory tract infection in hospitalized infants using real-time PCR Meligy, Bassant; Sayed, Amal; Ismail, Dalia Kadry; Kamal, Dina; Abdel-Latif, Walaa; Erfan, Dina M. 2016 2016-03-31 PMC N PMC7110902 10.1016/j.epag.2015.11.005 rggfg60a 0.482143 Choi_2017, Sun_H_2018
25 Koon_2010 Co-detection of Pandemic (H1N1) 2009 Virus and Other Respiratory Pathogens Koon, Kassi; Sanders, Catherine M.; Green, Jessica; Malone, Leslie; White, Holly; Zayas, Delineliz; Miller, Rebecca; Lu, Stanley; Han, Jian 2010 2010-12-23 PMC N PMC3294579 21122236.0 10.3201/eid1612.091697 i0j6tctr 0.448703 Paul_2019, Choi_2017
26 Yahia_2012 Human Metapneumovirus (hMPV) in Acute Respiratory Infection: A Clinic-Based Study in Egypt Yahia, Sohier; Kandeel, Amina Y.; Hammad, Enas; El-Gilany, Abdel-Hady 2012 2012-02-01 PMC N PMC7091199 22294269.0 10.1007/s12098-011-0677-5 o1ed2dz2 0.413208 Choi_2017, Bastien_2006, Sun_H_2018
27 Kaplan_2006 Human Bocavirus Infection among Children, Jordan Kaplan, Nasser M.; Dove, Winifred; Abu-Zeid, Ahmad F.; Shamoon, Hiyam E.; Abd-Eldayem, Sawsan A.; Hart, C. Anthony 2006 2006-09-23 PMC N PMC3294754 17073092.0 10.3201/eid1209.060417 kuwxzao3 0.412531 Choi_2017, Bastien_2006, Gorse_2015, Sun_H_2018
28 Kuliese_2017 Seasonal influenza vaccine effectiveness against laboratory-confirmed influenza in 2015–2016: a hospital-based test-negative case–control study in Lithuania Kuliese, Monika; Jancoriene, Ligita; Grimalauskaite, Rita; Zablockiene, Birute; Damuleviciene, Gyte; Velyvyte, Daiva; Lesauskaite, Vita; Ambrozaitis, Arvydas; Mickiene, Aukse; Gefenaite, Giedre 2017 2017-10-10 NONCOMM N PMC5652622 29018073.0 10.1136/bmjopen-2017-017835 a28bowqy 0.344510 Choi_2017
29 Howard_2017 Clinical Features of Human Metapneumovirus Infection in Ambulatory Children Aged 5–13 Years Howard, Leigh M; Edwards, Kathryn M; Zhu, Yuwei; Griffin, Marie R; Weinberg, Geoffrey A; Szilagyi, Peter G; Staat, Mary A; Payne, Daniel C; Williams, John V 2017 2017-03-24 PMC N PMC5954304 28369564.0 10.1093/jpids/pix012 2tt2uncf 0.322998 Choi_2017, Sun_H_2018, Bastien_2006
30 Chan_2011 Distinguishing Characteristics between Pandemic 2009–2010 Influenza A (H1N1) and Other Viruses in Patients Hospitalized with Respiratory Illness Chan, Philip A.; Mermel, Leonard A.; Andrea, Sarah B.; McCulloh, Russell; Mills, John P.; Echenique, Ignacio; Leveen, Emily; Rybak, Natasha; Cunha, Cheston; Machan, Jason T.; Healey, Terrance T.; Chapin, Kimberle C. 2011 2011-09-16 COMM-USE N PMC3174965 21949746.0 10.1371/journal.pone.0024734 sr53cekh 0.319058 Choi_2017, Sun_H_2018
31 Bastien_2006 Human Bocavirus Infection, Canada Bastien, Nathalie; Brandt, Ken; Dust, Kerry; Ward, Diane; Li, Yan 2006 2006-05-23 PMC N PMC3374420 16704852.0 10.3201/eid1205.051424 9tumplp3 0.302192 Choi_2017, Kaplan_2006, Gorse_2015, Khamis_2012