Topic 11 -- Abstracts with Biological Entities (English) - 75 Topics / Sub-Topic Model 01 - 15 Topics

cite ad title authors publish year publish time dataset abstract mentions covid pmcid pubmed id doi cord uid topic weight Similarity scispacy Similarity specter
1 Bernard_2005 The clinical importance of the nomenclature, evolution and taxonomy of human papillomaviruses Bernard, Hans-Ulrich 2005 2005-03-31 PMC N 15753006.0 10.1016/j.jcv.2004.10.021 4fbr8fx8 0.985876 Bernard_2005
2 Bernard_2005 The clinical importance of the nomenclature, evolution and taxonomy of human papillomaviruses Bernard, Hans-Ulrich 2005 2005-02-08 PMC N PMC7108213 15571999.0 10.1016/j.jcv.2004.10.021 4fbr8fx8 0.979391 Bernard_2005
3 Chastain_1991 Structural Elements in RNA Chastain, Michael; Tinoco, Ignacio 1991 1991-12-31 PMC N 10.1016/s0079-6603(08)60008-2 4eu9v5d3 0.776915
4 Cirulli_2020 Revealing variants in SARS-CoV-2 interaction domain of ACE2 and loss of function intolerance through analysis of >200,000 exomes Elizabeth T. Cirulli; Stephen Riffle; Alexandre Bolze; Nicole L. Washington 2020 2020-04-17 BioRxiv Y 10.1101/2020.04.07.030544 p7drekee 0.749298 Looker_2006, Polverino_2017
5 Dory_2015 Targeted Collection of Plasmid DNA in Large and Growing Animal Muscles 6 Weeks after DNA Vaccination with and without Electroporation Dory, Daniel; Le Moigne, Vincent; Cariolet, Roland; Béven, Véronique; Keranflec'h, André; Jestin, André 2015 2015-08-25 COMM-USE N PMC4561992 26380318.0 10.1155/2015/326825 yq190ig9 0.665628
6 Lespinats_2011 ColorPhylo: A Color Code to Accurately Display Taxonomic Classifications Lespinats, Sylvain; Fertil, Bernard 2011 2011-11-13 PMC N PMC3255521 22253532.0 10.4137/ebo.s7565 hohrbxyj 0.629987 Polverino_2017
7 Kim_H_2019 RNA-dependent RNA polymerase speed and fidelity are not the only determinants of the mechanism or efficiency of recombination Hyejeong Kim; Victor D. Ellis; Andrew Woodman; Yan Zhao; Jamie J. Arnold; Craig E. Cameron 2019 2019-09-14 BioRxiv N 10.1101/769224 ljz7rfny 0.614447
8 Jaworski_2017 Parallel ClickSeq and Nanopore sequencing elucidates the rapid evolution of defective-interfering RNAs in Flock House virus Jaworski, Elizabeth; Routh, Andrew 2017 2017-05-05 COMM-USE N PMC5435362 28475646.0 10.1371/journal.ppat.1006365 f7l4ty2j 0.559309
9 Ladner_2014 Standards for Sequencing Viral Genomes in the Era of High-Throughput Sequencing Ladner, Jason T.; Beitzel, Brett; Chain, Patrick S. G.; Davenport, Matthew G.; Donaldson, Eric; Frieman, Matthew; Kugelman, Jeffrey; Kuhn, Jens H.; O’Rear, Jules; Sabeti, Pardis C.; Wentworth, David E.; Wiley, Michael R.; Yu, Guo-Yun; Sozhamannan, Shanmuga; Bradburne, Christopher; Palacios, Gustavo 2014 2014-06-17 NONCOMM N PMC4068259 24939889.0 10.1128/mbio.01360-14 kqcx7lrq 0.534058
10 Burton_2016 The elusive quest for RNA knots Burton, Aaron S.; Di Stefano, Marco; Lehman, Niles; Orland, Henri; Micheletti, Cristian 2016 2016-02-01 NONCOMM N PMC4829277 26828280.0 10.1080/15476286.2015.1132069 s3tdllby 0.533128
11 Domingo_2016 Chapter 2 Molecular Basis of Genetic Variation of Viruses Error-Prone Replication Domingo, Esteban 2016 2016-12-31 PMC N PMC7149591 10.1016/b978-0-12-800837-9.00002-2 wi21dksk 0.521856 Domingo_2020
12 Saberi_2018 A planarian nidovirus expands the limits of RNA genome size Saberi, Amir; Gulyaeva, Anastasia A.; Brubacher, John L.; Newmark, Phillip A.; Gorbalenya, Alexander E. 2018 2018-11-01 None N PMC6211748 30383829.0 10.1371/journal.ppat.1007314 pxf8piqm 0.490130
13 Danchin_2011 Antifragility and Tinkering in Biology (and in Business) Flexibility Provides an Efficient Epigenetic Way to Manage Risk Danchin, Antoine; Binder, Philippe M.; Noria, Stanislas 2011 2011-11-29 COMM-USE N PMC3927596 24710302.0 10.3390/genes2040998 6nd9vgtf 0.472040 Bocharov_2018, Matthews_2020, Leach_2010, Looker_2006 Somovilla_2019
14 Dutilh_2014 Metagenomic ventures into outer sequence space Dutilh, Bas E 2014 2014-12-15 NONCOMM N PMC4588555 26458273.0 10.4161/21597081.2014.979664 ybd8hi8y 0.469055
15 Domingo_2020 Chapter 2 Molecular basis of genetic variation of viruses error-prone replication Domingo, Esteban 2020 2020-12-31 PMC N PMC7153327 10.1016/b978-0-12-816331-3.00002-7 r8el8nqm 0.423848 Simon-Loriere_2011 Domingo_2016
16 Schuck_2009 On computational approaches for size-and-shape distributions from sedimentation velocity analytical ultracentrifugation Schuck, Peter 2009 2009-10-06 PMC N PMC2892069 19806353.0 10.1007/s00249-009-0545-7 ip0fxvhp 0.396945 Bocharov_2018
17 Cameron_2009 Dynamics: the missing link between structure and function of the viral RNA-dependent RNA polymerase? Cameron, Craig E; Moustafa, Ibrahim M; Arnold, Jamie J 2009 2009-12-31 PMC N 19910183.0 10.1016/j.sbi.2009.10.012 fm44fqqb 0.395633
18 Gorbalenya_2018 Increasing the number of available ranks in virus taxonomy from five to ten and adopting the Baltimore classes as taxa at the basal rank Gorbalenya, Alexander E. 2018 2018-06-26 COMM-USE N PMC6132925 29942981.0 10.1007/s00705-018-3915-6 upi9ie6d 0.394117 Polverino_2017
19 Kew_O_1984 2 Applications of Oligonucleotide Fingerprinting to the Identification of Viruses Kew, Olen M.; Nottay, Baldev K.; Obijeski, John F. 1984 1984-12-31 PMC N 10.1016/b978-0-12-470208-0.50008-6 06pj7zkp 0.363166
20 McComb_2003 Chapter 4 Terms Vocabulary, Taxonomy, and Ontology McComb, Dave 2003 2003-12-31 PMC N 10.1016/b978-155860917-4/50006-4 iczb5z4e 0.357464
21 Bujarski_2008 Recombination Bujarski, J.J. 2008 2008-12-31 PMC N PMC7148591 10.1016/b978-012374410-4.00545-8 31xmue1g 0.346060 Simon-Loriere_2011
22 Baranov_2009 Sequences Promoting Recoding Are Singular Genomic Elements Baranov, Pavel V.; Gurvich, Olga 2009 2009-07-21 PMC N PMC7122551 10.1007/978-0-387-89382-2_14 tzn5y0z2 0.338280
23 Bickerstaff_2009 Absencing/presencing risk: Rethinking proximity and the experience of living with major technological hazards Bickerstaff, Karen; Simmons, Peter 2009 2009-09-30 PMC N PMC7094491 10.1016/j.geoforum.2009.07.004 dkncpt8g 0.319201 Looker_2006 Munthe_2015
24 Lepzelter_2010 Oscillation, cooperativity, and intermediates in the self-repressing gene Lepzelter, David; Feng, Haidong; Wang, Jin 2010 2010-04-26 PMC N PMC7094561 10.1016/j.cplett.2010.03.029 11esz6lk 0.309732 Leach_2010